CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : Mut = L339del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N339L339del1delttGtt-12100.83333329288-29290
N339L339del1delTtg-tg1220.16666729288-29290

Details of the mutation L339del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N339L339del1ttGtt-1012All0.000002
N339L339del1Ttg-tg212All0
N339L339del1ttGtt-220.111111
N339L339del1ttGtt-22AY.440.000012
N339L339del1ttGtt-11AY.120.10.000321
N339L339del1ttGtt-11AY.260.000028
N339L339del1ttGtt-11AY.9.20.000037
N339L339del1ttGtt-11B0.000128
N339L339del1Ttg-tg11B.10.000009
N339L339del1Ttg-tg11B.1.1.70.000001
N339L339del1ttGtt-11B.1.20.000009
N339L339del1ttGtt-11B.1.3770.004566