CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : Mut = H300R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N300H300RnonsyncAtcGt5395350.99257929171-29173
N300H300RnonsyncATcGC53930.0055658629171-29173
N300H300RnonsyncATcGA53910.0018552929171-29173

Details of the mutation H300R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N300H300RcAtcGt535539All0.000102
N300H300RcATcGC3539All0.000001
N300H300RcATcGA1539All0
N300H300RcAtcGt250250AY.430.001108
N300H300RcAtcGt7272B.1.617.20.000271
N300H300RcAtcGt6768B.1.1.70.00006
N300H300RcATcGA168B.1.1.70.000001
N300H300RcAtcGt4141AY.1030.000255
N300H300RcAtcGt1616AY.40.000025
N300H300RcAtcGt1313P.10.000205
N300H300RcAtcGt99AY.440.000055
N300H300RcAtcGt88AY.660.008556
N300H300RcAtcGt77AY.30.00007
N300H300RcAtcGt55AY.390.000124
N300H300RcAtcGt55B.1.1770.000066
N300H300RcAtcGt44AY.200.000155
N300H300RcAtcGt33B.1.1.1980.004405
N300H300RcAtcGt33B.1.1600.000094
N300H300RcAtcGt22AY.1110.000366
N300H300RcAtcGt22AY.160.000759
N300H300RcAtcGt12AY.230.00007
N300H300RcATcGC12AY.230.00007
N300H300RcAtcGt22AY.330.000134
N300H300RcAtcGt22B.10.000018
N300H300RcAtcGt22B.1.1.5190.000079
N300H300RcAtcGt22B.1.177.600.000437
N300H300RcATcGC22B.1.5260.000047
N300H300RcAtcGt22B.1.621.10.001012
N300H300RcAtcGt22P.1.140.000096
N300H300RcAtcGt11AY.1010.00049
N300H300RcAtcGt11AY.1020.000027
N300H300RcAtcGt11AY.250.000006
N300H300RcAtcGt11AY.290.000016
N300H300RcAtcGt11AY.39.10.00004
N300H300RcAtcGt11AY.450.000122
N300H300RcAtcGt11AY.5.40.000277
N300H300RcAtcGt11AY.750.000056
N300H300RcAtcGt11AY.910.00073
N300H300RcAtcGt11B.1.177.200.001517
N300H300RcAtcGt11B.1.2580.000067
N300H300RcAtcGt11B.1.3990.001934
N300H300RcAtcGt11B.1.5250.000113
N300H300RcAtcGt11B.1.6090.000479
N300H300RcAtcGt11B.1.617.10.000129