CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : Mut = G212V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N212G212VnonsyngGcgTc461346120.99978328907-28909
N212G212VnonsyngGCgTT461310.00021677928907-28909

Details of the mutation G212V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N212G212VgGcgTc46124613All0.000882
N212G212VgGCgTT14613All0
N212G212VgGcgTc17421742C.36.30.988088
N212G212VgGcgTc10671068C.360.971767
N212G212VgGCgTT11068C.360.000911
N212G212VgGcgTc328328C.36.3.10.891304
N212G212VgGcgTc246246AY.260.006964
N212G212VgGcgTc241241C.36.11
N212G212VgGcgTc100100B.1.1.70.00009
N212G212VgGcgTc9696AY.40.000149
N212G212VgGcgTc8484B.10.000769
N212G212VgGcgTc6262B.1.10.001125
N212G212VgGcgTc6161B.1.5760.055304
N212G212VgGcgTc5555B.1.617.20.000207
N212G212VgGcgTc5353AY.1030.000329
N212G212VgGcgTc2929AY.610.003039
N212G212VgGcgTc2929C.36.21
N212G212VgGcgTc2424B.1.1.5190.000953
N212G212VgGcgTc1717AY.440.000103
N212G212VgGcgTc1717B.1.1.10.005554
N212G212VgGcgTc1515AY.1180.00094
N212G212VgGcgTc1414AP.10.021021
N212G212VgGcgTc1414AY.1190.000494
N212G212VgGcgTc1313AY.430.000058
N212G212VgGcgTc1313C.170.722222
N212G212VgGcgTc1313K.30.080247
N212G212VgGcgTc1111AY.420.000443
N212G212VgGcgTc1111B.1.2180.056701
N212G212VgGcgTc1010AY.30.000099
N212G212VgGcgTc99AY.750.000504
N212G212VgGcgTc88AY.1200.000297
N212G212VgGcgTc88AY.330.000534
N212G212VgGcgTc77AY.270.000453
N212G212VgGcgTc77B.1.1.2940.008861
N212G212VgGcgTc77P.10.00011
N212G212VgGcgTc77P.60.022013
N212G212VgGcgTc55AY.230.000349
N212G212VgGcgTc55AY.250.00003
N212G212VgGcgTc55B.1.1.3180.001509
N212G212VgGcgTc55B.1.1770.000066
N212G212VgGcgTc55B.1.177.70.000824
N212G212VgGcgTc55B.1.20.000044
N212G212VgGcgTc55B.1.3020.066667
N212G212VgGcgTc44AY.1020.000106
N212G212VgGcgTc44AY.740.000463
N212G212VgGcgTc44AY.75.10.000721
N212G212VgGcgTc44B.1.1.3260.007042
N212G212VgGcgTc44B.1.3660.019512
N212G212VgGcgTc44B.1.6090.001918
N212G212VgGcgTc33AY.1130.000427
N212G212VgGcgTc33AY.5.40.00083
N212G212VgGcgTc33AY.570.001969
N212G212VgGcgTc33AY.980.000237
N212G212VgGcgTc33AY.98.10.000145
N212G212VgGcgTc33B.1.1.2160.002671
N212G212VgGcgTc33B.1.1.250.001706
N212G212VgGcgTc33B.1.1.280.000934
N212G212VgGcgTc33B.1.1.3170.001235
N212G212VgGcgTc33B.1.1.3430.0625
N212G212VgGcgTc33B.1.1.4480.006098
N212G212VgGcgTc33B.1.1600.000094
N212G212VgGcgTc33B.1.4290.000071
N212G212VgGcgTc33P.20.00056
N212G212VgGcgTc22A0.000774
N212G212VgGcgTc22AY.1140.000462
N212G212VgGcgTc22AY.390.000049
N212G212VgGcgTc22AY.4.20.000043
N212G212VgGcgTc22AY.460.000208
N212G212VgGcgTc22AY.670.000929
N212G212VgGcgTc22AY.9.10.000167
N212G212VgGcgTc22AY.9.20.000073
N212G212VgGcgTc22B0.000256
N212G212VgGcgTc22B.1.1.2070.002364
N212G212VgGcgTc22B.1.1.2140.000111
N212G212VgGcgTc22B.1.1.3160.00185
N212G212VgGcgTc22B.1.220.002635
N212G212VgGcgTc22B.1.3510.000059
N212G212VgGcgTc22B.1.360.000292
N212G212VgGcgTc22B.1.3980.005952
N212G212VgGcgTc22B.1.5900.009091
N212G212VgGcgTc22B.1.617.10.000258
N212G212VgGcgTc22P.1.10.000635
N212G212VgGcgTc22Q.80.00033
N212G212VgGcgTc110.055556
N212G212VgGcgTc11AY.100.00053
N212G212VgGcgTc11AY.1000.000046
N212G212VgGcgTc11AY.1080.001103
N212G212VgGcgTc11AY.1170.000085
N212G212VgGcgTc11AY.1210.000135
N212G212VgGcgTc11AY.16.10.00047
N212G212VgGcgTc11AY.3.10.000085
N212G212VgGcgTc11AY.320.000532
N212G212VgGcgTc11AY.380.000499
N212G212VgGcgTc11AY.4.40.000409
N212G212VgGcgTc11AY.4.50.000107
N212G212VgGcgTc11AY.5.30.000337
N212G212VgGcgTc11AY.520.000814
N212G212VgGcgTc11AY.530.000288
N212G212VgGcgTc11AY.550.000917
N212G212VgGcgTc11AY.710.000475
N212G212VgGcgTc11AY.80.000606
N212G212VgGcgTc11B.1.1.2170.003636
N212G212VgGcgTc11B.1.1.2290.005747
N212G212VgGcgTc11B.1.1.2880.001916
N212G212VgGcgTc11B.1.1.3060.000438
N212G212VgGcgTc11B.1.1.3070.002532
N212G212VgGcgTc11B.1.1.3120.001912
N212G212VgGcgTc11B.1.1.330.000421
N212G212VgGcgTc11B.1.1.4090.002833
N212G212VgGcgTc11B.1.1.4200.001006
N212G212VgGcgTc11B.1.1.470.005348
N212G212VgGcgTc11B.1.1.540.003021
N212G212VgGcgTc11B.1.1.700.000341
N212G212VgGcgTc11B.1.1110.001175
N212G212VgGcgTc11B.1.177.730.000566
N212G212VgGcgTc11B.1.2580.000067
N212G212VgGcgTc11B.1.258.170.000104
N212G212VgGcgTc11B.1.3690.000285
N212G212VgGcgTc11B.1.3750.00082
N212G212VgGcgTc11B.1.3960.000706
N212G212VgGcgTc11B.1.4160.001269
N212G212VgGcgTc11B.1.4280.00102
N212G212VgGcgTc11B.1.438.10.000107
N212G212VgGcgTc11B.1.5260.000024
N212G212VgGcgTc11B.1.5330.009615
N212G212VgGcgTc11B.1.5380.008065
N212G212VgGcgTc11B.1.5430.01
N212G212VgGcgTc11B.1.6370.000073
N212G212VgGcgTc11B.200.023256
N212G212VgGcgTc11B.6.60.000889
N212G212VgGcgTc11C.160.00106
N212G212VgGcgTc11N.50.001767
N212G212VgGcgTc11P.1.160.000374
N212G212VgGcgTc11P.1.170.000162
N212G212VgGcgTc11P.30.001595
N212G212VgGcgTc11Q.30.000145

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

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