CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : Mut = F53L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N53F53LnonsynttCttA32150.4687528430-28432
N53F53LnonsynTtcCtc3290.2812528430-28432
N53F53LnonsynttCttG3260.187528430-28432
N53F53LnonsynTtCCtT3220.062528430-28432

Details of the mutation F53L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N53F53LttCttA1532All0.000003
N53F53LTtcCtc932All0.000002
N53F53LttCttG632All0.000001
N53F53LTtCCtT232All0
N53F53LttCttA47B.10.000037
N53F53LTtcCtc27B.10.000018
N53F53LTtCCtT17B.10.000009
N53F53LttCttG56B0.000639
N53F53LttCttA16B0.000128
N53F53LttCttA33AY.430.000013
N53F53LTtcCtc120.055556
N53F53LttCttA120.055556
N53F53LttCttA12B.1.10.000018
N53F53LTtcCtc12B.1.10.000018
N53F53LTtcCtc22B.1.1.70.000002
N53F53LTtcCtc12P.10.000016
N53F53LTtCCtT12P.10.000016
N53F53LttCttA11A0.000387
N53F53LttCttA11AY.330.000067
N53F53LttCttA11AY.520.000814
N53F53LTtcCtc11AY.590.00053
N53F53LTtcCtc11B.1.1770.000013
N53F53LttCttA11B.1.3010.005917
N53F53LttCttG11B.1.4160.001269
N53F53LttCttA11B.1.6230.000536