CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
N | 110 | F110F | syn | ttC | ttT | 23983 | 23983 | 1 | 28601-28603 |
Details of the mutation F110F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
N | 110 | F110F | ttC | ttT | 23983 | 23983 | All | 0.004587 |
N | 110 | F110F | ttC | ttT | 6149 | 6149 | P.1.17 | 0.994662 |
N | 110 | F110F | ttC | ttT | 3428 | 3428 | B.1.1.7 | 0.003069 |
N | 110 | F110F | ttC | ttT | 2706 | 2706 | AY.4 | 0.004212 |
N | 110 | F110F | ttC | ttT | 1138 | 1138 | P.1.17.1 | 0.995626 |
N | 110 | F110F | ttC | ttT | 907 | 907 | B.1.617.2 | 0.003415 |
N | 110 | F110F | ttC | ttT | 734 | 734 | B.1.2 | 0.006463 |
N | 110 | F110F | ttC | ttT | 425 | 425 | P.1 | 0.006695 |
N | 110 | F110F | ttC | ttT | 365 | 365 | P.1.14 | 0.017447 |
N | 110 | F110F | ttC | ttT | 356 | 356 | AY.25 | 0.002141 |
N | 110 | F110F | ttC | ttT | 315 | 315 | B.1 | 0.002885 |
N | 110 | F110F | ttC | ttT | 293 | 293 | AY.43 | 0.001298 |
N | 110 | F110F | ttC | ttT | 290 | 290 | B.1.1 | 0.005261 |
N | 110 | F110F | ttC | ttT | 288 | 288 | AY.94 | 0.12749 |
N | 110 | F110F | ttC | ttT | 250 | 250 | AY.3 | 0.002487 |
N | 110 | F110F | ttC | ttT | 248 | 248 | B.1.177 | 0.003266 |
N | 110 | F110F | ttC | ttT | 217 | 217 | B.1.1.429 | 1 |
N | 110 | F110F | ttC | ttT | 195 | 195 | AY.33 | 0.013022 |
N | 110 | F110F | ttC | ttT | 191 | 191 | AY.20 | 0.007423 |
N | 110 | F110F | ttC | ttT | 176 | 176 | AY.44 | 0.001071 |
N | 110 | F110F | ttC | ttT | 167 | 167 | AY.103 | 0.001037 |
N | 110 | F110F | ttC | ttT | 156 | 156 | B.1.160 | 0.004865 |
N | 110 | F110F | ttC | ttT | 140 | 140 | B.1.628 | 0.049331 |
N | 110 | F110F | ttC | ttT | 136 | 136 | C.36 | 0.123862 |
N | 110 | F110F | ttC | ttT | 131 | 131 | B.1.351 | 0.003894 |
N | 110 | F110F | ttC | ttT | 117 | 117 | B.1.429 | 0.002753 |
N | 110 | F110F | ttC | ttT | 116 | 116 | AY.26 | 0.003284 |
N | 110 | F110F | ttC | ttT | 107 | 107 | B.1.1.317 | 0.044051 |
N | 110 | F110F | ttC | ttT | 106 | 106 | B.1.234 | 0.013986 |
N | 110 | F110F | ttC | ttT | 97 | 97 | AY.6 | 0.003989 |
N | 110 | F110F | ttC | ttT | 94 | 94 | B.1.390 | 1 |
N | 110 | F110F | ttC | ttT | 93 | 93 | C.1.2 | 0.395745 |
N | 110 | F110F | ttC | ttT | 87 | 87 | B.1.1.216 | 0.077471 |
N | 110 | F110F | ttC | ttT | 80 | 80 | B.1.1.222 | 0.01632 |
N | 110 | F110F | ttC | ttT | 79 | 79 | B.1.36 | 0.011526 |
N | 110 | F110F | ttC | ttT | 77 | 77 | B.1.1.299 | 0.939024 |
N | 110 | F110F | ttC | ttT | 76 | 76 | AY.9 | 0.005137 |
N | 110 | F110F | ttC | ttT | 75 | 75 | AY.54 | 0.007151 |
N | 110 | F110F | ttC | ttT | 74 | 74 | AY.5 | 0.001528 |
N | 110 | F110F | ttC | ttT | 72 | 72 | B.1.243 | 0.00501 |
N | 110 | F110F | ttC | ttT | 71 | 71 | B.1.526 | 0.001669 |
N | 110 | F110F | ttC | ttT | 71 | 71 | B.1.610 | 0.251773 |
N | 110 | F110F | ttC | ttT | 69 | 69 | B.1.363 | 0.896104 |
N | 110 | F110F | ttC | ttT | 68 | 68 | B.1.177.21 | 0.0052 |
N | 110 | F110F | ttC | ttT | 66 | 66 | B.1.1.519 | 0.002621 |
N | 110 | F110F | ttC | ttT | 65 | 65 | AY.102 | 0.001723 |
N | 110 | F110F | ttC | ttT | 63 | 63 | B.1.1.284 | 0.006766 |
N | 110 | F110F | ttC | ttT | 60 | 60 | AY.75 | 0.003361 |
N | 110 | F110F | ttC | ttT | 59 | 59 | B.1.563 | 1 |
N | 110 | F110F | ttC | ttT | 57 | 57 | AY.39 | 0.001409 |
N | 110 | F110F | ttC | ttT | 55 | 55 | B.1.1.347 | 1 |
N | 110 | F110F | ttC | ttT | 54 | 54 | B.1.427 | 0.002727 |
N | 110 | F110F | ttC | ttT | 53 | 53 | AY.4.5 | 0.005697 |
N | 110 | F110F | ttC | ttT | 52 | 52 | B.1.1.58 | 0.27957 |
N | 110 | F110F | ttC | ttT | 51 | 51 | AY.47 | 0.001586 |
N | 110 | F110F | ttC | ttT | 50 | 50 | B.1.258 | 0.003327 |
N | 110 | F110F | ttC | ttT | 49 | 49 | B.1.596 | 0.00427 |
N | 110 | F110F | ttC | ttT | 45 | 45 | B.1.1.33 | 0.018939 |
N | 110 | F110F | ttC | ttT | 44 | 44 | AY.5.3 | 0.014845 |
N | 110 | F110F | ttC | ttT | 41 | 41 | B.1.382 | 0.366071 |
N | 110 | F110F | ttC | ttT | 39 | 39 | B.1.1.517 | 0.265306 |
N | 110 | F110F | ttC | ttT | 39 | 39 | B.1.595 | 0.010177 |
N | 110 | F110F | ttC | ttT | 37 | 37 | B.1.221 | 0.002628 |
N | 110 | F110F | ttC | ttT | 36 | 36 | AY.98.1 | 0.001744 |
N | 110 | F110F | ttC | ttT | 35 | 35 | B.1.243.1 | 0.777778 |
N | 110 | F110F | ttC | ttT | 34 | 34 | AY.4.2 | 0.000737 |
N | 110 | F110F | ttC | ttT | 33 | 33 | B.1.1.157 | 0.030137 |
N | 110 | F110F | ttC | ttT | 33 | 33 | B.1.1.219 | 0.165 |
N | 110 | F110F | ttC | ttT | 33 | 33 | C.37 | 0.00383 |
N | 110 | F110F | ttC | ttT | 32 | 32 | B.1.621.1 | 0.016186 |
N | 110 | F110F | ttC | ttT | 31 | 31 | AY.98 | 0.002449 |
N | 110 | F110F | ttC | ttT | 30 | 30 | AY.119 | 0.001059 |
N | 110 | F110F | ttC | ttT | 30 | 30 | Q.2 | 0.018405 |
N | 110 | F110F | ttC | ttT | 29 | 29 | AY.121 | 0.003924 |
N | 110 | F110F | ttC | ttT | 29 | 29 | B.1.1.214 | 0.001608 |
N | 110 | F110F | ttC | ttT | 28 | 28 | AY.29 | 0.000442 |
N | 110 | F110F | ttC | ttT | 27 | 27 | AY.46 | 0.00281 |
N | 110 | F110F | ttC | ttT | 27 | 27 | AY.9.2 | 0.000992 |
N | 110 | F110F | ttC | ttT | 26 | 26 | B.1.525 | 0.002942 |
N | 110 | F110F | ttC | ttT | 25 | 25 | B.1.177.79 | 0.058548 |
N | 110 | F110F | ttC | ttT | 25 | 25 | B.1.311 | 0.006864 |
N | 110 | F110F | ttC | ttT | 25 | 25 | B.1.617.1 | 0.003224 |
N | 110 | F110F | ttC | ttT | 23 | 23 | P.1.1 | 0.007306 |
N | 110 | F110F | ttC | ttT | 22 | 22 | B.1.621 | 0.001947 |
N | 110 | F110F | ttC | ttT | 21 | 21 | AY.61 | 0.0022 |
N | 110 | F110F | ttC | ttT | 21 | 21 | P.1.10 | 0.005659 |
N | 110 | F110F | ttC | ttT | 20 | 20 | AY.39.1 | 0.000792 |
N | 110 | F110F | ttC | ttT | 19 | 19 | AY.100 | 0.000874 |
N | 110 | F110F | ttC | ttT | 19 | 19 | D.2 | 0.001426 |
N | 110 | F110F | ttC | ttT | 17 | 17 | AY.117 | 0.001437 |
N | 110 | F110F | ttC | ttT | 17 | 17 | AY.42 | 0.000684 |
N | 110 | F110F | ttC | ttT | 17 | 17 | B.1.1.434 | 0.005925 |
N | 110 | F110F | ttC | ttT | 17 | 17 | B.1.349 | 0.012152 |
N | 110 | F110F | ttC | ttT | 17 | 17 | Q.1 | 0.002148 |
N | 110 | F110F | ttC | ttT | 16 | 16 | AY.1 | 0.006332 |
N | 110 | F110F | ttC | ttT | 16 | 16 | AY.5.4 | 0.004427 |
N | 110 | F110F | ttC | ttT | 16 | 16 | B.1.1.28 | 0.00498 |
N | 110 | F110F | ttC | ttT | 16 | 16 | B.1.177.16 | 0.010631 |
N | 110 | F110F | ttC | ttT | 16 | 16 | B.1.416 | 0.020305 |
N | 110 | F110F | ttC | ttT | 16 | 16 | C.36.3.1 | 0.043478 |
N | 110 | F110F | ttC | ttT | 16 | 16 | P.1.16 | 0.005986 |
N | 110 | F110F | ttC | ttT | 16 | 16 | Q.4 | 0.007276 |
N | 110 | F110F | ttC | ttT | 15 | 15 | B.1.1.70 | 0.005116 |
N | 110 | F110F | ttC | ttT | 15 | 15 | Q.8 | 0.002474 |
N | 110 | F110F | ttC | ttT | 14 | 14 | AY.23 | 0.000976 |
N | 110 | F110F | ttC | ttT | 14 | 14 | B.1.1.464 | 0.020619 |
N | 110 | F110F | ttC | ttT | 14 | 14 | B.1.239 | 0.017094 |
N | 110 | F110F | ttC | ttT | 13 | 13 | AY.99.2 | 0.001198 |
N | 110 | F110F | ttC | ttT | 12 | 12 | AY.37 | 0.003793 |
N | 110 | F110F | ttC | ttT | 12 | 12 | B.1.1.432 | 0.01519 |
N | 110 | F110F | ttC | ttT | 11 | 11 | AY.118 | 0.000689 |
N | 110 | F110F | ttC | ttT | 11 | 11 | AY.120 | 0.000409 |
N | 110 | F110F | ttC | ttT | 11 | 11 | AY.27 | 0.000712 |
N | 110 | F110F | ttC | ttT | 11 | 11 | AY.30 | 0.004353 |
N | 110 | F110F | ttC | ttT | 11 | 11 | AY.45 | 0.001339 |
N | 110 | F110F | ttC | ttT | 11 | 11 | AY.46.6 | 0.000794 |
N | 110 | F110F | ttC | ttT | 11 | 11 | AY.59 | 0.005826 |
N | 110 | F110F | ttC | ttT | 11 | 11 | AY.71 | 0.005226 |
N | 110 | F110F | ttC | ttT | 11 | 11 | B.1.1.141 | 0.022133 |
N | 110 | F110F | ttC | ttT | 11 | 11 | B.1.1.50 | 0.007468 |
N | 110 | F110F | ttC | ttT | 10 | 10 | AJ.1 | 0.454545 |
N | 110 | F110F | ttC | ttT | 10 | 10 | AY.99.1 | 0.015528 |
N | 110 | F110F | ttC | ttT | 10 | 10 | B.1.1.37 | 0.001929 |
N | 110 | F110F | ttC | ttT | 10 | 10 | B.1.177.81 | 0.001893 |
N | 110 | F110F | ttC | ttT | 9 | 9 | AY.109 | 0.006657 |
N | 110 | F110F | ttC | ttT | 9 | 9 | AY.36 | 0.001334 |
N | 110 | F110F | ttC | ttT | 9 | 9 | B.1.240 | 0.00194 |
N | 110 | F110F | ttC | ttT | 9 | 9 | P.1.15 | 0.002091 |
N | 110 | F110F | ttC | ttT | 9 | 9 | P.1.7 | 0.002874 |
N | 110 | F110F | ttC | ttT | 8 | 8 | AY.63 | 0.003095 |
N | 110 | F110F | ttC | ttT | 8 | 8 | AY.7.1 | 0.000902 |
N | 110 | F110F | ttC | ttT | 8 | 8 | AY.75.1 | 0.001442 |
N | 110 | F110F | ttC | ttT | 8 | 8 | B.1.1.282 | 0.093023 |
N | 110 | F110F | ttC | ttT | 8 | 8 | B.1.1.291 | 0.005939 |
N | 110 | F110F | ttC | ttT | 8 | 8 | B.1.214.2 | 0.004796 |
N | 110 | F110F | ttC | ttT | 8 | 8 | B.1.497 | 0.002518 |
N | 110 | F110F | ttC | ttT | 7 | 7 | A.2.5 | 0.003493 |
N | 110 | F110F | ttC | ttT | 7 | 7 | AY.35 | 0.001631 |
N | 110 | F110F | ttC | ttT | 7 | 7 | AY.46.2 | 0.004447 |
N | 110 | F110F | ttC | ttT | 7 | 7 | AY.46.5 | 0.001389 |
N | 110 | F110F | ttC | ttT | 7 | 7 | AY.53 | 0.002013 |
N | 110 | F110F | ttC | ttT | 7 | 7 | B.1.1.1 | 0.002287 |
N | 110 | F110F | ttC | ttT | 7 | 7 | B.1.258.17 | 0.000728 |
N | 110 | F110F | ttC | ttT | 7 | 7 | B.1.36.29 | 0.003621 |
N | 110 | F110F | ttC | ttT | 7 | 7 | P.2 | 0.001306 |
N | 110 | F110F | ttC | ttT | 6 | 6 | AE.8 | 0.002934 |
N | 110 | F110F | ttC | ttT | 6 | 6 | AY.38 | 0.002996 |
N | 110 | F110F | ttC | ttT | 6 | 6 | AY.73 | 0.003992 |
N | 110 | F110F | ttC | ttT | 6 | 6 | B.1.1.139 | 0.136364 |
N | 110 | F110F | ttC | ttT | 6 | 6 | B.1.1.189 | 0.009077 |
N | 110 | F110F | ttC | ttT | 6 | 6 | B.1.1.25 | 0.003411 |
N | 110 | F110F | ttC | ttT | 6 | 6 | B.1.351.2 | 0.001815 |
N | 110 | F110F | ttC | ttT | 6 | 6 | B.1.389 | 0.006012 |
N | 110 | F110F | ttC | ttT | 6 | 6 | B.1.466.2 | 0.002347 |
N | 110 | F110F | ttC | ttT | 6 | 6 | B.1.606 | 0.036145 |
N | 110 | F110F | ttC | ttT | 6 | 6 | B.1.609 | 0.002876 |
N | 110 | F110F | ttC | ttT | 6 | 6 | B.1.629 | 0.08 |
N | 110 | F110F | ttC | ttT | 6 | 6 | C.36.3 | 0.003403 |
N | 110 | F110F | ttC | ttT | 5 | 5 | AU.1 | 0.006329 |
N | 110 | F110F | ttC | ttT | 5 | 5 | AY.106 | 0.001674 |
N | 110 | F110F | ttC | ttT | 5 | 5 | AY.113 | 0.000712 |
N | 110 | F110F | ttC | ttT | 5 | 5 | AY.24 | 0.002155 |
N | 110 | F110F | ttC | ttT | 5 | 5 | B.1.1.231 | 0.01548 |
N | 110 | F110F | ttC | ttT | 5 | 5 | B.1.1.326 | 0.008803 |
N | 110 | F110F | ttC | ttT | 5 | 5 | B.1.1.397 | 0.011261 |
N | 110 | F110F | ttC | ttT | 5 | 5 | B.1.1.437 | 0.052083 |
N | 110 | F110F | ttC | ttT | 5 | 5 | B.1.1.448 | 0.010163 |
N | 110 | F110F | ttC | ttT | 5 | 5 | B.1.177.4 | 0.001055 |
N | 110 | F110F | ttC | ttT | 5 | 5 | B.1.177.7 | 0.000824 |
N | 110 | F110F | ttC | ttT | 5 | 5 | B.1.351.3 | 0.004382 |
N | 110 | F110F | ttC | ttT | 5 | 5 | B.1.367 | 0.003962 |
N | 110 | F110F | ttC | ttT | 5 | 5 | B.1.438.1 | 0.000536 |
N | 110 | F110F | ttC | ttT | 5 | 5 | B.1.561 | 0.001985 |
N | 110 | F110F | ttC | ttT | 5 | 5 | B.1.575 | 0.001517 |
N | 110 | F110F | ttC | ttT | 4 | 4 | 0.222222 | |
N | 110 | F110F | ttC | ttT | 4 | 4 | AT.1 | 0.020513 |
N | 110 | F110F | ttC | ttT | 4 | 4 | AY.120.1 | 0.001284 |
N | 110 | F110F | ttC | ttT | 4 | 4 | AY.3.1 | 0.000341 |
N | 110 | F110F | ttC | ttT | 4 | 4 | AY.4.2.1 | 0.000596 |
N | 110 | F110F | ttC | ttT | 4 | 4 | AY.48 | 0.00186 |
N | 110 | F110F | ttC | ttT | 4 | 4 | AZ.2 | 0.003284 |
N | 110 | F110F | ttC | ttT | 4 | 4 | B | 0.000511 |
N | 110 | F110F | ttC | ttT | 4 | 4 | B.1.1.161 | 0.014134 |
N | 110 | F110F | ttC | ttT | 4 | 4 | B.1.1.270 | 0.041237 |
N | 110 | F110F | ttC | ttT | 4 | 4 | B.1.1.301 | 0.004717 |
N | 110 | F110F | ttC | ttT | 4 | 4 | B.1.1.318 | 0.001207 |
N | 110 | F110F | ttC | ttT | 4 | 4 | B.1.1.416 | 0.00362 |
N | 110 | F110F | ttC | ttT | 4 | 4 | B.1.177.18 | 0.00464 |
N | 110 | F110F | ttC | ttT | 4 | 4 | B.1.177.62 | 0.004768 |
N | 110 | F110F | ttC | ttT | 4 | 4 | B.1.177.75 | 0.004162 |
N | 110 | F110F | ttC | ttT | 4 | 4 | B.1.369 | 0.001141 |
N | 110 | F110F | ttC | ttT | 4 | 4 | B.1.400 | 0.001716 |
N | 110 | F110F | ttC | ttT | 4 | 4 | B.1.619 | 0.003484 |
N | 110 | F110F | ttC | ttT | 4 | 4 | B.1.619.1 | 0.002566 |
N | 110 | F110F | ttC | ttT | 4 | 4 | B.1.93 | 0.003735 |
N | 110 | F110F | ttC | ttT | 4 | 4 | B.3 | 0.003322 |
N | 110 | F110F | ttC | ttT | 4 | 4 | R.1 | 0.00036 |
N | 110 | F110F | ttC | ttT | 3 | 3 | A | 0.001161 |
N | 110 | F110F | ttC | ttT | 3 | 3 | A.23.1 | 0.002113 |
N | 110 | F110F | ttC | ttT | 3 | 3 | AY.105 | 0.001929 |
N | 110 | F110F | ttC | ttT | 3 | 3 | AY.114 | 0.000693 |
N | 110 | F110F | ttC | ttT | 3 | 3 | AY.116 | 0.00086 |
N | 110 | F110F | ttC | ttT | 3 | 3 | AY.14 | 0.000264 |
N | 110 | F110F | ttC | ttT | 3 | 3 | AY.16.1 | 0.00141 |
N | 110 | F110F | ttC | ttT | 3 | 3 | AY.29.1 | 0.000662 |
N | 110 | F110F | ttC | ttT | 3 | 3 | AY.69 | 0.00056 |
N | 110 | F110F | ttC | ttT | 3 | 3 | AY.7 | 0.000588 |
N | 110 | F110F | ttC | ttT | 3 | 3 | AY.86 | 0.00249 |
N | 110 | F110F | ttC | ttT | 3 | 3 | AY.88 | 0.002653 |
N | 110 | F110F | ttC | ttT | 3 | 3 | AY.9.1 | 0.000251 |
N | 110 | F110F | ttC | ttT | 3 | 3 | AY.93 | 0.000819 |
N | 110 | F110F | ttC | ttT | 3 | 3 | AY.96 | 0.006224 |
N | 110 | F110F | ttC | ttT | 3 | 3 | AY.97 | 0.005102 |
N | 110 | F110F | ttC | ttT | 3 | 3 | B.1.1.145 | 0.111111 |
N | 110 | F110F | ttC | ttT | 3 | 3 | B.1.1.172 | 0.054545 |
N | 110 | F110F | ttC | ttT | 3 | 3 | B.1.1.243 | 0.012245 |
N | 110 | F110F | ttC | ttT | 3 | 3 | B.1.1.311 | 0.001074 |
N | 110 | F110F | ttC | ttT | 3 | 3 | B.1.1.417 | 0.008108 |
N | 110 | F110F | ttC | ttT | 3 | 3 | B.1.1.46 | 0.0131 |
N | 110 | F110F | ttC | ttT | 3 | 3 | B.1.177.12 | 0.000455 |
N | 110 | F110F | ttC | ttT | 3 | 3 | B.1.177.25 | 0.044776 |
N | 110 | F110F | ttC | ttT | 3 | 3 | B.1.177.73 | 0.001699 |
N | 110 | F110F | ttC | ttT | 3 | 3 | B.1.336 | 0.007317 |
N | 110 | F110F | ttC | ttT | 3 | 3 | B.1.36.1 | 0.003421 |
N | 110 | F110F | ttC | ttT | 3 | 3 | B.1.409 | 0.002344 |
N | 110 | F110F | ttC | ttT | 3 | 3 | B.1.429.1 | 0.036145 |
N | 110 | F110F | ttC | ttT | 3 | 3 | B.1.453 | 0.009709 |
N | 110 | F110F | ttC | ttT | 3 | 3 | B.1.517 | 0.001281 |
N | 110 | F110F | ttC | ttT | 3 | 3 | B.1.576 | 0.00272 |
N | 110 | F110F | ttC | ttT | 3 | 3 | B.1.595.1 | 0.017544 |
N | 110 | F110F | ttC | ttT | 3 | 3 | B.1.599 | 0.010949 |
N | 110 | F110F | ttC | ttT | 3 | 3 | B.1.620 | 0.002838 |
N | 110 | F110F | ttC | ttT | 3 | 3 | B.1.623 | 0.001609 |
N | 110 | F110F | ttC | ttT | 3 | 3 | B.1.637 | 0.000219 |
N | 110 | F110F | ttC | ttT | 3 | 3 | C.14 | 0.012987 |
N | 110 | F110F | ttC | ttT | 3 | 3 | C.32 | 0.069767 |
N | 110 | F110F | ttC | ttT | 3 | 3 | P.1.12 | 0.001452 |
N | 110 | F110F | ttC | ttT | 3 | 3 | P.1.2 | 0.003468 |
N | 110 | F110F | ttC | ttT | 3 | 3 | Q.3 | 0.000435 |
N | 110 | F110F | ttC | ttT | 2 | 2 | A.2.5.1 | 0.009615 |
N | 110 | F110F | ttC | ttT | 2 | 2 | AD.2 | 0.000438 |
N | 110 | F110F | ttC | ttT | 2 | 2 | AY.107 | 0.000932 |
N | 110 | F110F | ttC | ttT | 2 | 2 | AY.111 | 0.000366 |
N | 110 | F110F | ttC | ttT | 2 | 2 | AY.116.1 | 0.000623 |
N | 110 | F110F | ttC | ttT | 2 | 2 | AY.4.1 | 0.001475 |
N | 110 | F110F | ttC | ttT | 2 | 2 | AY.4.4 | 0.000818 |
N | 110 | F110F | ttC | ttT | 2 | 2 | AY.62 | 0.000871 |
N | 110 | F110F | ttC | ttT | 2 | 2 | AY.68 | 0.000547 |
N | 110 | F110F | ttC | ttT | 2 | 2 | AY.78 | 0.003082 |
N | 110 | F110F | ttC | ttT | 2 | 2 | AY.8 | 0.001212 |
N | 110 | F110F | ttC | ttT | 2 | 2 | AY.80 | 0.002257 |
N | 110 | F110F | ttC | ttT | 2 | 2 | AY.91 | 0.001461 |
N | 110 | F110F | ttC | ttT | 2 | 2 | B.1.1.208 | 0.02439 |
N | 110 | F110F | ttC | ttT | 2 | 2 | B.1.1.269 | 0.002706 |
N | 110 | F110F | ttC | ttT | 2 | 2 | B.1.1.277 | 0.001517 |
N | 110 | F110F | ttC | ttT | 2 | 2 | B.1.1.294 | 0.002532 |
N | 110 | F110F | ttC | ttT | 2 | 2 | B.1.1.304 | 0.005618 |
N | 110 | F110F | ttC | ttT | 2 | 2 | B.1.1.348 | 0.001592 |
N | 110 | F110F | ttC | ttT | 2 | 2 | B.1.1.368 | 0.006173 |
N | 110 | F110F | ttC | ttT | 2 | 2 | B.1.1.374 | 0.004751 |
N | 110 | F110F | ttC | ttT | 2 | 2 | B.1.1.39 | 0.001019 |
N | 110 | F110F | ttC | ttT | 2 | 2 | B.1.1.409 | 0.005666 |
N | 110 | F110F | ttC | ttT | 2 | 2 | B.1.1.44 | 0.004819 |
N | 110 | F110F | ttC | ttT | 2 | 2 | B.1.1.528 | 0.009615 |
N | 110 | F110F | ttC | ttT | 2 | 2 | B.1.111 | 0.00235 |
N | 110 | F110F | ttC | ttT | 2 | 2 | B.1.160.32 | 0.008584 |
N | 110 | F110F | ttC | ttT | 2 | 2 | B.1.177.11 | 0.003396 |
N | 110 | F110F | ttC | ttT | 2 | 2 | B.1.177.32 | 0.002699 |
N | 110 | F110F | ttC | ttT | 2 | 2 | B.1.177.44 | 0.001038 |
N | 110 | F110F | ttC | ttT | 2 | 2 | B.1.177.53 | 0.004785 |
N | 110 | F110F | ttC | ttT | 2 | 2 | B.1.177.60 | 0.000437 |
N | 110 | F110F | ttC | ttT | 2 | 2 | B.1.177.86 | 0.000367 |
N | 110 | F110F | ttC | ttT | 2 | 2 | B.1.179 | 0.007519 |
N | 110 | F110F | ttC | ttT | 2 | 2 | B.1.199 | 0.008264 |
N | 110 | F110F | ttC | ttT | 2 | 2 | B.1.258.2 | 0.009009 |
N | 110 | F110F | ttC | ttT | 2 | 2 | B.1.279 | 0.001027 |
N | 110 | F110F | ttC | ttT | 2 | 2 | B.1.298 | 0.004228 |
N | 110 | F110F | ttC | ttT | 2 | 2 | B.1.305 | 0.004301 |
N | 110 | F110F | ttC | ttT | 2 | 2 | B.1.320 | 0.002491 |
N | 110 | F110F | ttC | ttT | 2 | 2 | B.1.36.18 | 0.00084 |
N | 110 | F110F | ttC | ttT | 2 | 2 | B.1.36.8 | 0.002 |
N | 110 | F110F | ttC | ttT | 2 | 2 | B.1.456 | 0.006536 |
N | 110 | F110F | ttC | ttT | 2 | 2 | B.1.480 | 0.004975 |
N | 110 | F110F | ttC | ttT | 2 | 2 | B.1.499 | 0.002101 |
N | 110 | F110F | ttC | ttT | 2 | 2 | B.1.564.1 | 0.003155 |
N | 110 | F110F | ttC | ttT | 2 | 2 | B.1.577 | 0.001375 |
N | 110 | F110F | ttC | ttT | 2 | 2 | B.40 | 0.000729 |
N | 110 | F110F | ttC | ttT | 2 | 2 | N.4 | 0.008511 |
N | 110 | F110F | ttC | ttT | 2 | 2 | N.5 | 0.003534 |
N | 110 | F110F | ttC | ttT | 2 | 2 | P.1.8 | 0.009569 |
N | 110 | F110F | ttC | ttT | 1 | 1 | A.1 | 0.000282 |
N | 110 | F110F | ttC | ttT | 1 | 1 | A.2 | 0.000662 |
N | 110 | F110F | ttC | ttT | 1 | 1 | A.2.2 | 0.001689 |
N | 110 | F110F | ttC | ttT | 1 | 1 | A.5 | 0.001923 |
N | 110 | F110F | ttC | ttT | 1 | 1 | AU.2 | 0.002421 |
N | 110 | F110F | ttC | ttT | 1 | 1 | AY.10 | 0.00053 |
N | 110 | F110F | ttC | ttT | 1 | 1 | AY.11 | 0.001339 |
N | 110 | F110F | ttC | ttT | 1 | 1 | AY.110 | 0.000113 |
N | 110 | F110F | ttC | ttT | 1 | 1 | AY.13 | 0.000161 |
N | 110 | F110F | ttC | ttT | 1 | 1 | AY.19 | 0.00114 |
N | 110 | F110F | ttC | ttT | 1 | 1 | AY.23.1 | 0.000417 |
N | 110 | F110F | ttC | ttT | 1 | 1 | AY.28 | 0.00189 |
N | 110 | F110F | ttC | ttT | 1 | 1 | AY.32 | 0.000532 |
N | 110 | F110F | ttC | ttT | 1 | 1 | AY.34 | 0.000097 |
N | 110 | F110F | ttC | ttT | 1 | 1 | AY.34.1 | 0.00051 |
N | 110 | F110F | ttC | ttT | 1 | 1 | AY.4.3 | 0.000842 |
N | 110 | F110F | ttC | ttT | 1 | 1 | AY.40 | 0.000964 |
N | 110 | F110F | ttC | ttT | 1 | 1 | AY.46.4 | 0.000165 |
N | 110 | F110F | ttC | ttT | 1 | 1 | AY.55 | 0.000917 |
N | 110 | F110F | ttC | ttT | 1 | 1 | AY.57 | 0.000656 |
N | 110 | F110F | ttC | ttT | 1 | 1 | AY.64 | 0.000595 |
N | 110 | F110F | ttC | ttT | 1 | 1 | AY.65 | 0.000533 |
N | 110 | F110F | ttC | ttT | 1 | 1 | AY.66 | 0.00107 |
N | 110 | F110F | ttC | ttT | 1 | 1 | AY.70 | 0.000209 |
N | 110 | F110F | ttC | ttT | 1 | 1 | AY.74 | 0.000116 |
N | 110 | F110F | ttC | ttT | 1 | 1 | AY.77 | 0.001127 |
N | 110 | F110F | ttC | ttT | 1 | 1 | AY.79 | 0.001211 |
N | 110 | F110F | ttC | ttT | 1 | 1 | AY.84 | 0.000437 |
N | 110 | F110F | ttC | ttT | 1 | 1 | AY.85 | 0.000427 |
N | 110 | F110F | ttC | ttT | 1 | 1 | AY.87 | 0.000833 |
N | 110 | F110F | ttC | ttT | 1 | 1 | AY.92 | 0.000287 |
N | 110 | F110F | ttC | ttT | 1 | 1 | AY.95 | 0.000761 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.1.12 | 0.007463 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.1.132 | 0.014925 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.1.15 | 0.013514 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.1.170 | 0.001247 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.1.176 | 0.000439 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.1.196 | 0.005714 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.1.198 | 0.001468 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.1.205 | 0.003717 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.1.227 | 0.004348 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.1.261 | 0.008621 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.1.279 | 0.001121 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.1.289 | 0.002083 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.1.302 | 0.002075 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.1.306 | 0.000438 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.1.315 | 0.008475 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.1.316 | 0.000925 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.1.322 | 0.008772 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.1.328 | 0.016949 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.1.332 | 0.03125 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.1.333 | 0.001076 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.1.339 | 0.010526 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.1.344 | 0.010753 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.1.354 | 0.004386 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.1.375 | 0.011905 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.1.377 | 0.001381 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.1.389 | 0.006061 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.1.392 | 0.052632 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.1.4 | 0.002976 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.1.403 | 0.025641 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.1.406 | 0.006494 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.1.5 | 0.008333 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.1.518 | 0.006329 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.1.526 | 0.003546 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.1.63 | 0.000386 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.1.74 | 0.00431 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.1.89 | 0.006061 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.110.3 | 0.000718 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.128 | 0.000635 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.143 | 0.021277 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.160.14 | 0.002119 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.160.33 | 0.004425 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.170 | 0.00431 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.177.15 | 0.000631 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.177.19 | 0.001431 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.177.2 | 0.004545 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.177.35 | 0.000691 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.177.48 | 0.003125 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.177.52 | 0.001757 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.177.54 | 0.000606 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.177.57 | 0.000281 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.177.6 | 0.000977 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.177.72 | 0.00339 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.177.77 | 0.000726 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.189 | 0.004292 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.192 | 0.009259 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.195 | 0.005025 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.201 | 0.005682 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.206 | 0.000816 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.22 | 0.001318 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.23 | 0.006061 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.241 | 0.000812 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.258.3 | 0.001675 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.329 | 0.000608 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.333 | 0.010526 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.335 | 0.010309 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.346 | 0.001311 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.35 | 0.008475 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.351.1 | 0.038462 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.36.10 | 0.004785 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.36.17 | 0.000494 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.36.19 | 0.009259 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.36.21 | 0.00216 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.36.36 | 0.000602 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.36.38 | 0.001642 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.361 | 0.001289 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.362.2 | 0.004717 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.375 | 0.00082 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.400.1 | 0.015152 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.416.1 | 0.001563 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.422 | 0.000812 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.448 | 0.002625 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.452 | 0.013699 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.469 | 0.00361 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.470 | 0.001404 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.471 | 0.002732 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.473 | 0.019231 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.474 | 0.001901 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.478 | 0.011765 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.504 | 0.03125 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.513 | 0.013889 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.524 | 0.001406 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.546 | 0.003704 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.560 | 0.00463 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.564 | 0.000426 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.565 | 0.00081 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.568 | 0.001111 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.582 | 0.000491 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.587 | 0.001898 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.595.4 | 0.007299 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.627 | 0.00202 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.9.2 | 0.1 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.1.9.4 | 0.006135 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.10 | 0.008264 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.15 | 0.017544 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.4.5 | 0.011905 |
N | 110 | F110F | ttC | ttT | 1 | 1 | B.6 | 0.00091 |
N | 110 | F110F | ttC | ttT | 1 | 1 | C.11 | 0.010638 |
N | 110 | F110F | ttC | ttT | 1 | 1 | C.17 | 0.055556 |
N | 110 | F110F | ttC | ttT | 1 | 1 | C.2 | 0.016129 |
N | 110 | F110F | ttC | ttT | 1 | 1 | C.30 | 0.001727 |
N | 110 | F110F | ttC | ttT | 1 | 1 | C.35 | 0.000774 |
N | 110 | F110F | ttC | ttT | 1 | 1 | C.40 | 0.027778 |
N | 110 | F110F | ttC | ttT | 1 | 1 | L.3 | 0.003546 |
N | 110 | F110F | ttC | ttT | 1 | 1 | P.1.9 | 0.004808 |
N | 110 | F110F | ttC | ttT | 1 | 1 | U.2 | 0.008772 |
![]() |
![]() |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
|