CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
N | 63 | D63G | nonsyn | gAc | gGc | 2684504 | 2684161 | 0.999872 | 28460-28462 | |
N | 63 | D63G | nonsyn | gAC | gGT | 2684504 | 334 | 0.000124418 | 28460-28462 | |
N | 63 | D63G | nonsyn | gAC | gGA | 2684504 | 9 | 0.00000335257 | 28460-28462 |
Details of the mutation D63G within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
N | 63 | D63G | gAc | gGc | 2684161 | 2684504 | All | 0.513378 |
N | 63 | D63G | gAC | gGT | 334 | 2684504 | All | 0.000064 |
N | 63 | D63G | gAC | gGA | 9 | 2684504 | All | 0.000002 |
N | 63 | D63G | gAc | gGc | 638384 | 638515 | AY.4 | 0.993595 |
N | 63 | D63G | gAC | gGT | 130 | 638515 | AY.4 | 0.000202 |
N | 63 | D63G | gAC | gGA | 1 | 638515 | AY.4 | 0.000002 |
N | 63 | D63G | gAc | gGc | 260075 | 260117 | B.1.617.2 | 0.97929 |
N | 63 | D63G | gAC | gGT | 40 | 260117 | B.1.617.2 | 0.000151 |
N | 63 | D63G | gAC | gGA | 2 | 260117 | B.1.617.2 | 0.000008 |
N | 63 | D63G | gAc | gGc | 210396 | 210413 | AY.43 | 0.932152 |
N | 63 | D63G | gAC | gGT | 17 | 210413 | AY.43 | 0.000075 |
N | 63 | D63G | gAc | gGc | 162418 | 162420 | AY.25 | 0.976915 |
N | 63 | D63G | gAC | gGT | 2 | 162420 | AY.25 | 0.000012 |
N | 63 | D63G | gAc | gGc | 158139 | 158175 | AY.103 | 0.981894 |
N | 63 | D63G | gAC | gGT | 34 | 158175 | AY.103 | 0.000211 |
N | 63 | D63G | gAC | gGA | 2 | 158175 | AY.103 | 0.000012 |
N | 63 | D63G | gAc | gGc | 153496 | 153510 | AY.44 | 0.934293 |
N | 63 | D63G | gAC | gGT | 14 | 153510 | AY.44 | 0.000085 |
N | 63 | D63G | gAc | gGc | 99681 | 99697 | AY.3 | 0.991466 |
N | 63 | D63G | gAC | gGT | 16 | 99697 | AY.3 | 0.000159 |
N | 63 | D63G | gAc | gGc | 63381 | 63382 | AY.29 | 0.999748 |
N | 63 | D63G | gAC | gGT | 1 | 63382 | AY.29 | 0.000016 |
N | 63 | D63G | gAc | gGc | 47942 | 47942 | AY.5 | 0.989964 |
N | 63 | D63G | gAc | gGc | 45970 | 45972 | AY.4.2 | 0.997029 |
N | 63 | D63G | gAC | gGT | 2 | 45972 | AY.4.2 | 0.000043 |
N | 63 | D63G | gAc | gGc | 39457 | 39466 | AY.39 | 0.975041 |
N | 63 | D63G | gAC | gGT | 9 | 39466 | AY.39 | 0.000222 |
N | 63 | D63G | gAc | gGc | 37676 | 37676 | AY.102 | 0.998939 |
N | 63 | D63G | gAc | gGc | 34864 | 34864 | AY.26 | 0.987006 |
N | 63 | D63G | gAc | gGc | 31563 | 31563 | AY.47 | 0.981772 |
N | 63 | D63G | gAc | gGc | 27889 | 27890 | AY.119 | 0.984712 |
N | 63 | D63G | gAC | gGT | 1 | 27890 | AY.119 | 0.000035 |
N | 63 | D63G | gAc | gGc | 26722 | 26757 | AY.120 | 0.993494 |
N | 63 | D63G | gAC | gGT | 35 | 26757 | AY.120 | 0.001301 |
N | 63 | D63G | gAc | gGc | 26240 | 26240 | AY.9.2 | 0.963785 |
N | 63 | D63G | gAc | gGc | 25455 | 25456 | AY.20 | 0.989312 |
N | 63 | D63G | gAC | gGT | 1 | 25456 | AY.20 | 0.000039 |
N | 63 | D63G | gAc | gGc | 25021 | 25021 | AY.39.1 | 0.991166 |
N | 63 | D63G | gAc | gGc | 24232 | 24232 | AY.6 | 0.996627 |
N | 63 | D63G | gAc | gGc | 23497 | 23499 | AY.42 | 0.945287 |
N | 63 | D63G | gAC | gGT | 2 | 23499 | AY.42 | 0.00008 |
N | 63 | D63G | gAc | gGc | 21392 | 21401 | AY.100 | 0.984174 |
N | 63 | D63G | gAC | gGT | 9 | 21401 | AY.100 | 0.000414 |
N | 63 | D63G | gAc | gGc | 19383 | 19384 | AY.98.1 | 0.938735 |
N | 63 | D63G | gAC | gGT | 1 | 19384 | AY.98.1 | 0.000048 |
N | 63 | D63G | gAc | gGc | 17575 | 17575 | AY.75 | 0.984594 |
N | 63 | D63G | gAc | gGc | 15549 | 15549 | AY.118 | 0.974126 |
N | 63 | D63G | gAc | gGc | 15433 | 15433 | AY.27 | 0.998835 |
N | 63 | D63G | gAc | gGc | 14669 | 14677 | AY.9 | 0.991551 |
N | 63 | D63G | gAC | gGT | 8 | 14677 | AY.9 | 0.000541 |
N | 63 | D63G | gAc | gGc | 14451 | 14451 | AY.33 | 0.965008 |
N | 63 | D63G | gAc | gGc | 12882 | 12883 | AY.23 | 0.898514 |
N | 63 | D63G | gAC | gGT | 1 | 12883 | AY.23 | 0.00007 |
N | 63 | D63G | gAc | gGc | 12523 | 12523 | AY.98 | 0.989257 |
N | 63 | D63G | gAc | gGc | 12512 | 12513 | AY.46.6 | 0.903459 |
N | 63 | D63G | gAC | gGT | 1 | 12513 | AY.46.6 | 0.000072 |
N | 63 | D63G | gAc | gGc | 11508 | 11508 | AY.3.1 | 0.981158 |
N | 63 | D63G | gAc | gGc | 11450 | 11451 | AY.9.1 | 0.95864 |
N | 63 | D63G | gAC | gGT | 1 | 11451 | AY.9.1 | 0.000084 |
N | 63 | D63G | gAc | gGc | 11450 | 11450 | AY.117 | 0.967715 |
N | 63 | D63G | gAc | gGc | 11309 | 11309 | AY.14 | 0.995335 |
N | 63 | D63G | gAc | gGc | 10653 | 10653 | AY.99.2 | 0.981753 |
N | 63 | D63G | gAc | gGc | 10050 | 10050 | AY.54 | 0.958238 |
N | 63 | D63G | gAc | gGc | 10031 | 10031 | AY.34 | 0.972656 |
N | 63 | D63G | gAc | gGc | 9212 | 9212 | AY.4.5 | 0.990218 |
N | 63 | D63G | gAc | gGc | 9098 | 9099 | AY.61 | 0.953269 |
N | 63 | D63G | gAC | gGT | 1 | 9099 | AY.61 | 0.000105 |
N | 63 | D63G | gAc | gGc | 8796 | 8797 | AY.46 | 0.915487 |
N | 63 | D63G | gAC | gGT | 1 | 8797 | AY.46 | 0.000104 |
N | 63 | D63G | gAc | gGc | 8698 | 8698 | AY.7.1 | 0.980277 |
N | 63 | D63G | gAc | gGc | 8627 | 8627 | AY.74 | 0.997687 |
N | 63 | D63G | gAc | gGc | 7967 | 7967 | AY.45 | 0.969457 |
N | 63 | D63G | gAc | gGc | 6891 | 6891 | AY.113 | 0.981205 |
N | 63 | D63G | gAc | gGc | 6774 | 6774 | AY.121 | 0.916644 |
N | 63 | D63G | gAc | gGc | 6696 | 6696 | AY.4.2.1 | 0.997616 |
N | 63 | D63G | gAc | gGc | 6602 | 6602 | AY.36 | 0.978509 |
N | 63 | D63G | gAc | gGc | 6158 | 6159 | AY.13 | 0.991307 |
N | 63 | D63G | gAC | gGT | 1 | 6159 | AY.13 | 0.000161 |
N | 63 | D63G | gAc | gGc | 6004 | 6004 | AY.46.4 | 0.987662 |
N | 63 | D63G | gAc | gGc | 5393 | 5393 | AY.111 | 0.987729 |
N | 63 | D63G | gAc | gGc | 5187 | 5187 | AY.75.1 | 0.935269 |
N | 63 | D63G | gAc | gGc | 5156 | 5156 | AY.69 | 0.962479 |
N | 63 | D63G | gAc | gGc | 5078 | 5078 | AY.7 | 0.995296 |
N | 63 | D63G | gAc | gGc | 5036 | 5036 | AY.46.5 | 0.999206 |
N | 63 | D63G | gAc | gGc | 4644 | 4644 | AY.70 | 0.968307 |
N | 63 | D63G | gAc | gGc | 4534 | 4534 | AY.29.1 | 0.999779 |
N | 63 | D63G | gAc | gGc | 4256 | 4256 | AY.114 | 0.983591 |
N | 63 | D63G | gAc | gGc | 4222 | 4222 | AY.35 | 0.98392 |
N | 63 | D63G | gAc | gGc | 3709 | 3709 | AY.110 | 0.417963 |
N | 63 | D63G | gAc | gGc | 3656 | 3656 | AY.93 | 0.998362 |
N | 63 | D63G | gAc | gGc | 3498 | 3498 | AY.68 | 0.957569 |
N | 63 | D63G | gAc | gGc | 3495 | 3495 | AY.5.4 | 0.967072 |
N | 63 | D63G | gAc | gGc | 3418 | 3418 | AY.116 | 0.980212 |
N | 63 | D63G | gAc | gGc | 3370 | 3370 | AY.53 | 0.968948 |
N | 63 | D63G | gAc | gGc | 3241 | 3241 | AY.92 | 0.931054 |
N | 63 | D63G | gAc | gGc | 3192 | 3192 | AY.116.1 | 0.994083 |
N | 63 | D63G | gAc | gGc | 3125 | 3125 | AY.37 | 0.987674 |
N | 63 | D63G | gAc | gGc | 3090 | 3090 | AY.12 | 0.976612 |
N | 63 | D63G | gAc | gGc | 3089 | 3089 | AY.120.1 | 0.991653 |
N | 63 | D63G | gAc | gGc | 2984 | 2984 | AY.41 | 0.877131 |
N | 63 | D63G | gAc | gGc | 2849 | 2849 | AY.5.3 | 0.961201 |
N | 63 | D63G | gAc | gGc | 2791 | 2791 | AY.2 | 0.993946 |
N | 63 | D63G | gAc | gGc | 2765 | 2765 | AY.106 | 0.925988 |
N | 63 | D63G | gAc | gGc | 2562 | 2562 | AY.63 | 0.991103 |
N | 63 | D63G | gAc | gGc | 2522 | 2524 | AY.16 | 0.957479 |
N | 63 | D63G | gAC | gGT | 2 | 2524 | AY.16 | 0.000759 |
N | 63 | D63G | gAc | gGc | 2507 | 2510 | AY.1 | 0.992085 |
N | 63 | D63G | gAC | gGA | 3 | 2510 | AY.1 | 0.001187 |
N | 63 | D63G | gAc | gGc | 2436 | 2436 | AY.30 | 0.963989 |
N | 63 | D63G | gAc | gGc | 2396 | 2396 | AY.23.1 | 1 |
N | 63 | D63G | gAc | gGc | 2357 | 2357 | AY.4.4 | 0.964403 |
N | 63 | D63G | gAc | gGc | 2264 | 2264 | AY.85 | 0.967108 |
N | 63 | D63G | gAc | gGc | 2262 | 2262 | AY.24 | 0.975 |
N | 63 | D63G | gAc | gGc | 2243 | 2243 | AY.62 | 0.977342 |
N | 63 | D63G | gAc | gGc | 2193 | 2193 | AY.94 | 0.970784 |
N | 63 | D63G | gAc | gGc | 2177 | 2177 | AY.84 | 0.952318 |
N | 63 | D63G | gAc | gGc | 2128 | 2128 | AY.107 | 0.991612 |
N | 63 | D63G | gAc | gGc | 2117 | 2117 | AY.67 | 0.982823 |
N | 63 | D63G | gAc | gGc | 2115 | 2115 | AY.48 | 0.983721 |
N | 63 | D63G | gAc | gGc | 2071 | 2071 | B.1 | 0.018969 |
N | 63 | D63G | gAc | gGc | 2051 | 2051 | AY.16.1 | 0.963816 |
N | 63 | D63G | gAc | gGc | 2049 | 2049 | AY.71 | 0.973397 |
N | 63 | D63G | gAc | gGc | 2012 | 2012 | AY.101 | 0.986758 |
N | 63 | D63G | gAc | gGc | 1956 | 1957 | AY.34.1 | 0.99745 |
N | 63 | D63G | gAC | gGA | 1 | 1957 | AY.34.1 | 0.00051 |
N | 63 | D63G | gAc | gGc | 1934 | 1934 | AY.120.2.1 | 0.963627 |
N | 63 | D63G | gAc | gGc | 1878 | 1878 | AY.38 | 0.937594 |
N | 63 | D63G | gAc | gGc | 1858 | 1858 | AY.10 | 0.984632 |
N | 63 | D63G | gAc | gGc | 1855 | 1855 | AY.59 | 0.982521 |
N | 63 | D63G | gAc | gGc | 1755 | 1755 | AY.32 | 0.934505 |
N | 63 | D63G | gAc | gGc | 1716 | 1716 | AY.7.2 | 0.959732 |
N | 63 | D63G | gAc | gGc | 1711 | 1711 | AY.65 | 0.912047 |
N | 63 | D63G | gAc | gGc | 1659 | 1659 | AY.64 | 0.9875 |
N | 63 | D63G | gAc | gGc | 1648 | 1648 | AY.8 | 0.998788 |
N | 63 | D63G | gAc | gGc | 1518 | 1519 | AY.57 | 0.996063 |
N | 63 | D63G | gAC | gGT | 1 | 1519 | AY.57 | 0.000656 |
N | 63 | D63G | gAc | gGc | 1518 | 1518 | AY.105 | 0.976206 |
N | 63 | D63G | gAc | gGc | 1470 | 1470 | AY.73 | 0.978044 |
N | 63 | D63G | gAc | gGc | 1458 | 1458 | AY.90 | 0.997947 |
N | 63 | D63G | gAc | gGc | 1447 | 1447 | AY.46.2 | 0.919314 |
N | 63 | D63G | gAc | gGc | 1378 | 1378 | AY.39.1.1 | 0.998551 |
N | 63 | D63G | gAc | gGc | 1350 | 1350 | AY.4.1 | 0.995575 |
N | 63 | D63G | gAc | gGc | 1320 | 1320 | AY.109 | 0.976331 |
N | 63 | D63G | gAc | gGc | 1320 | 1320 | AY.91 | 0.964207 |
N | 63 | D63G | gAc | gGc | 1258 | 1258 | AY.95 | 0.957382 |
N | 63 | D63G | gAc | gGc | 1246 | 1246 | AY.50 | 0.996003 |
N | 63 | D63G | gAc | gGc | 1196 | 1196 | AY.87 | 0.995837 |
N | 63 | D63G | gAc | gGc | 1190 | 1190 | AY.52 | 0.969055 |
N | 63 | D63G | gAc | gGc | 1183 | 1184 | AY.86 | 0.981743 |
N | 63 | D63G | gAC | gGT | 1 | 1184 | AY.86 | 0.00083 |
N | 63 | D63G | gAc | gGc | 1109 | 1109 | AY.88 | 0.980548 |
N | 63 | D63G | gAc | gGc | 1079 | 1079 | AY.55 | 0.989908 |
N | 63 | D63G | gAc | gGc | 1065 | 1065 | AY.58 | 0.966425 |
N | 63 | D63G | gAc | gGc | 1059 | 1059 | AY.4.3 | 0.891414 |
N | 63 | D63G | gAc | gGc | 1059 | 1059 | AY.46.3 | 0.988796 |
N | 63 | D63G | gAc | gGc | 1039 | 1039 | AY.51 | 0.944545 |
N | 63 | D63G | gAc | gGc | 1004 | 1004 | AY.40 | 0.968177 |
N | 63 | D63G | gAc | gGc | 965 | 965 | AY.46.1 | 0.99076 |
N | 63 | D63G | gAc | gGc | 958 | 958 | AY.60 | 0.898687 |
N | 63 | D63G | gAc | gGc | 917 | 917 | AY.66 | 0.980749 |
N | 63 | D63G | gAc | gGc | 895 | 895 | AY.108 | 0.98677 |
N | 63 | D63G | gAc | gGc | 883 | 883 | AY.80 | 0.996614 |
N | 63 | D63G | gAc | gGc | 871 | 871 | AY.99 | 0.913956 |
N | 63 | D63G | gAc | gGc | 869 | 869 | AY.77 | 0.979707 |
N | 63 | D63G | gAc | gGc | 855 | 855 | AY.19 | 0.974914 |
N | 63 | D63G | gAc | gGc | 820 | 821 | AY.79 | 0.992736 |
N | 63 | D63G | gAC | gGT | 1 | 821 | AY.79 | 0.001211 |
N | 63 | D63G | gAc | gGc | 753 | 753 | AY.120.2 | 0.967866 |
N | 63 | D63G | gAc | gGc | 733 | 733 | AY.11 | 0.981258 |
N | 63 | D63G | gAc | gGc | 709 | 709 | AY.72 | 0.964626 |
N | 63 | D63G | gAc | gGc | 700 | 700 | AY.82 | 0.949796 |
N | 63 | D63G | gAc | gGc | 640 | 640 | AY.39.2 | 0.986133 |
N | 63 | D63G | gAc | gGc | 632 | 632 | AY.99.1 | 0.981366 |
N | 63 | D63G | gAc | gGc | 605 | 605 | AY.56 | 0.971108 |
N | 63 | D63G | gAc | gGc | 597 | 597 | AY.78 | 0.919877 |
N | 63 | D63G | gAc | gGc | 580 | 580 | AY.83 | 1 |
N | 63 | D63G | gAc | gGc | 539 | 539 | AY.97 | 0.916667 |
N | 63 | D63G | gAc | gGc | 529 | 529 | AY.28 | 1 |
N | 63 | D63G | gAc | gGc | 506 | 506 | AY.9.2.1 | 1 |
N | 63 | D63G | gAc | gGc | 502 | 503 | AY.104 | 0.996032 |
N | 63 | D63G | gAC | gGT | 1 | 503 | AY.104 | 0.001984 |
N | 63 | D63G | gAc | gGc | 503 | 503 | AY.21 | 0.954459 |
N | 63 | D63G | gAc | gGc | 487 | 487 | AY.81 | 0.97012 |
N | 63 | D63G | gAc | gGc | 474 | 474 | AY.22 | 0.991632 |
N | 63 | D63G | gAc | gGc | 448 | 448 | AY.15 | 0.995556 |
N | 63 | D63G | gAc | gGc | 403 | 403 | AY.5.2 | 0.992611 |
N | 63 | D63G | gAc | gGc | 309 | 309 | AY.49 | 0.98722 |
N | 63 | D63G | gAc | gGc | 285 | 285 | B | 0.036426 |
N | 63 | D63G | gAc | gGc | 266 | 266 | AY.5.1 | 1 |
N | 63 | D63G | gAc | gGc | 239 | 239 | AY.91.1 | 0.971545 |
N | 63 | D63G | gAc | gGc | 203 | 203 | AY.76 | 0.980676 |
N | 63 | D63G | gAc | gGc | 202 | 202 | AY.89 | 0.990196 |
N | 63 | D63G | gAc | gGc | 122 | 122 | AY.17 | 1 |
N | 63 | D63G | gAc | gGc | 119 | 119 | AY.96 | 0.246888 |
N | 63 | D63G | gAc | gGc | 104 | 104 | AY.115 | 0.541667 |
N | 63 | D63G | gAc | gGc | 71 | 71 | B.1.1.7 | 0.000064 |
N | 63 | D63G | gAc | gGc | 53 | 53 | AY.31 | 0.981481 |
N | 63 | D63G | gAc | gGc | 51 | 51 | B.1.596 | 0.004444 |
N | 63 | D63G | gAc | gGc | 48 | 48 | B.1.1 | 0.000871 |
N | 63 | D63G | gAc | gGc | 31 | 31 | AY.18 | 0.313131 |
N | 63 | D63G | gAc | gGc | 30 | 30 | B.1.214 | 0.10989 |
N | 63 | D63G | gAc | gGc | 28 | 28 | B.1.617.1 | 0.003611 |
N | 63 | D63G | gAc | gGc | 23 | 23 | P.1 | 0.000362 |
N | 63 | D63G | gAc | gGc | 17 | 17 | B.1.2 | 0.00015 |
N | 63 | D63G | gAc | gGc | 17 | 17 | R.1 | 0.00153 |
N | 63 | D63G | gAc | gGc | 15 | 15 | B.1.177 | 0.000198 |
N | 63 | D63G | gAc | gGc | 12 | 12 | B.1.1.526 | 0.042553 |
N | 63 | D63G | gAc | gGc | 11 | 11 | B.1.623 | 0.005901 |
N | 63 | D63G | gAc | gGc | 10 | 10 | B.1.177.73 | 0.005663 |
N | 63 | D63G | gAc | gGc | 10 | 10 | B.1.621 | 0.000885 |
N | 63 | D63G | gAc | gGc | 9 | 9 | A | 0.003483 |
N | 63 | D63G | gAc | gGc | 9 | 9 | B.1.526 | 0.000212 |
N | 63 | D63G | gAc | gGc | 9 | 9 | B.1.576 | 0.00816 |
N | 63 | D63G | gAc | gGc | 8 | 8 | B.1.351 | 0.000238 |
N | 63 | D63G | gAc | gGc | 7 | 7 | B.1.628 | 0.002467 |
N | 63 | D63G | gAc | gGc | 6 | 6 | B.1.160 | 0.000187 |
N | 63 | D63G | gAc | gGc | 5 | 5 | B.1.1.317 | 0.002058 |
N | 63 | D63G | gAc | gGc | 5 | 5 | B.1.1.53 | 0.068493 |
N | 63 | D63G | gAc | gGc | 5 | 5 | B.1.375 | 0.004098 |
N | 63 | D63G | gAc | gGc | 5 | 5 | B.1.462 | 0.036232 |
N | 63 | D63G | gAc | gGc | 4 | 4 | B.1.157 | 0.01194 |
N | 63 | D63G | gAc | gGc | 4 | 4 | B.1.466.2 | 0.001565 |
N | 63 | D63G | gAc | gGc | 3 | 3 | 0.166667 | |
N | 63 | D63G | gAc | gGc | 3 | 3 | B.1.1.294 | 0.003797 |
N | 63 | D63G | gAc | gGc | 3 | 3 | B.1.432 | 0.033708 |
N | 63 | D63G | gAc | gGc | 3 | 3 | B.1.474 | 0.005703 |
N | 63 | D63G | gAc | gGc | 3 | 3 | B.1.609 | 0.001438 |
N | 63 | D63G | gAc | gGc | 3 | 3 | B.40 | 0.001093 |
N | 63 | D63G | gAc | gGc | 3 | 3 | P.1.1 | 0.000953 |
N | 63 | D63G | gAc | gGc | 3 | 3 | P.1.7 | 0.000958 |
N | 63 | D63G | gAc | gGc | 2 | 2 | A.2.5 | 0.000998 |
N | 63 | D63G | gAc | gGc | 2 | 2 | B.1.1.432 | 0.002532 |
N | 63 | D63G | gAc | gGc | 2 | 2 | B.1.1.448 | 0.004065 |
N | 63 | D63G | gAc | gGc | 2 | 2 | B.1.221 | 0.000142 |
N | 63 | D63G | gAc | gGc | 2 | 2 | B.1.243 | 0.000139 |
N | 63 | D63G | gAc | gGc | 2 | 2 | B.1.260 | 0.006689 |
N | 63 | D63G | gAc | gGc | 2 | 2 | B.1.325 | 0.013793 |
N | 63 | D63G | gAc | gGc | 2 | 2 | B.1.369 | 0.00057 |
N | 63 | D63G | gAc | gGc | 2 | 2 | B.1.378 | 0.013699 |
N | 63 | D63G | gAc | gGc | 2 | 2 | B.1.400 | 0.000858 |
N | 63 | D63G | gAc | gGc | 2 | 2 | B.1.582 | 0.000981 |
N | 63 | D63G | gAc | gGc | 2 | 2 | B.1.604 | 0.034483 |
N | 63 | D63G | gAc | gGc | 2 | 2 | B.1.629 | 0.026667 |
N | 63 | D63G | gAc | gGc | 2 | 2 | B.1.637 | 0.000146 |
N | 63 | D63G | gAc | gGc | 2 | 2 | B.1.81 | 0.042553 |
N | 63 | D63G | gAc | gGc | 2 | 2 | C.36.3 | 0.001134 |
N | 63 | D63G | gAc | gGc | 2 | 2 | P.1.17 | 0.000324 |
N | 63 | D63G | gAc | gGc | 2 | 2 | P.2 | 0.000373 |
N | 63 | D63G | gAc | gGc | 1 | 1 | A.1 | 0.000282 |
N | 63 | D63G | gAc | gGc | 1 | 1 | AU.2 | 0.002421 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.1.10 | 0.001115 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.1.161 | 0.003534 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.1.28 | 0.000311 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.1.326 | 0.001761 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.1.409 | 0.002833 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.1.416 | 0.000905 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.1.512 | 0.028571 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.1.523 | 0.001563 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.170 | 0.00431 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.179 | 0.003759 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.208 | 0.04 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.218 | 0.005155 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.240 | 0.000216 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.247 | 0.014925 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.258 | 0.000067 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.258.11 | 0.000396 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.301 | 0.005917 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.323 | 0.020833 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.335 | 0.010309 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.340 | 0.004292 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.351.5 | 0.0006 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.355 | 0.011111 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.36.10 | 0.004785 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.36.29 | 0.000517 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.366 | 0.004878 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.367 | 0.000792 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.380 | 0.006623 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.404 | 0.001302 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.427 | 0.00005 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.429 | 0.000024 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.433 | 0.003195 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.485 | 0.014925 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.525 | 0.000113 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.530 | 0.007143 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.537 | 0.02 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.551 | 0.00129 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.560 | 0.00463 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.564 | 0.000426 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.573 | 0.006098 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.577 | 0.000687 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.580 | 0.004065 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.581 | 0.009434 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.586 | 0.010989 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.595 | 0.000261 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.599 | 0.00365 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.600 | 0.005848 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.619 | 0.000871 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.621.1 | 0.000506 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.627 | 0.00202 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.631 | 0.003367 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.632 | 0.006711 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.1.634 | 0.003425 |
N | 63 | D63G | gAc | gGc | 1 | 1 | B.55 | 0.00295 |
N | 63 | D63G | gAc | gGc | 1 | 1 | C.30 | 0.001727 |
N | 63 | D63G | gAc | gGc | 1 | 1 | C.37 | 0.000116 |
N | 63 | D63G | gAc | gGc | 1 | 1 | C.37.1 | 0.002618 |
N | 63 | D63G | gAc | gGc | 1 | 1 | P.1.14 | 0.000048 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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