CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : Mut = D401A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N401D401AnonsyngAtgCt1491480.99328929474-29476
N401D401AnonsyngATgCA14910.0067114129474-29476

Details of the mutation D401A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N401D401AgAtgCt148149All0.000028
N401D401AgATgCA1149All0
N401D401AgAtgCt3636B.1.1.70.000032
N401D401AgAtgCt2929AY.40.000045
N401D401AgAtgCt1919AY.1030.000118
N401D401AgAtgCt1818B.1.177.860.003302
N401D401AgAtgCt1616AY.470.000498
N401D401AgAtgCt55AY.440.00003
N401D401AgAtgCt44B.1.617.20.000015
N401D401AgAtgCt33AY.1000.000138
N401D401AgAtgCt33AY.99.20.000276
N401D401AgAtgCt33B.1.4090.002344
N401D401AgAtgCt22B.1.1.2140.000111
N401D401AgAtgCt22B.1.1770.000026
N401D401AgAtgCt11AY.1060.000335
N401D401AgAtgCt11AY.1190.000035
N401D401AgAtgCt11AY.430.000004
N401D401AgAtgCt11B.1.10.000018
N401D401AgAtgCt11B.1.1.2630.001558
N401D401AgATgCA11B.1.4970.000315
N401D401AgAtgCt11B.1.617.10.000129
N401D401AgAtgCt11B.150.017544
N401D401AgAtgCt11D.20.000075