CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
N | 86 | Y86Y | syn | taC | taT | 9156 | 9156 | 1 | 28529-28531 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
N | 86 | Y86Y | taC | taT | 9156 | 9156 | All | 0.001751 |
N | 86 | Y86Y | taC | taT | 3450 | 3450 | B.1.526 | 0.081091 |
N | 86 | Y86Y | taC | taT | 1521 | 1521 | B.1.1.7 | 0.001362 |
N | 86 | Y86Y | taC | taT | 938 | 938 | AY.4 | 0.00146 |
N | 86 | Y86Y | taC | taT | 284 | 284 | B.1.634 | 0.972603 |
N | 86 | Y86Y | taC | taT | 208 | 208 | B.1.575.2 | 1 |
N | 86 | Y86Y | taC | taT | 202 | 202 | B.1.2 | 0.001779 |
N | 86 | Y86Y | taC | taT | 180 | 180 | B.1.617.2 | 0.000678 |
N | 86 | Y86Y | taC | taT | 92 | 92 | AY.25 | 0.000553 |
N | 86 | Y86Y | taC | taT | 91 | 91 | B.1.595.4 | 0.664234 |
N | 86 | Y86Y | taC | taT | 87 | 87 | B.1.177 | 0.001146 |
N | 86 | Y86Y | taC | taT | 81 | 81 | AY.103 | 0.000503 |
N | 86 | Y86Y | taC | taT | 79 | 79 | B.1.429 | 0.001859 |
N | 86 | Y86Y | taC | taT | 78 | 78 | AY.43 | 0.000346 |
N | 86 | Y86Y | taC | taT | 76 | 76 | AY.54 | 0.007246 |
N | 86 | Y86Y | taC | taT | 75 | 75 | AY.3 | 0.000746 |
N | 86 | Y86Y | taC | taT | 68 | 68 | AY.29 | 0.001073 |
N | 86 | Y86Y | taC | taT | 66 | 66 | AY.29.1 | 0.014553 |
N | 86 | Y86Y | taC | taT | 58 | 58 | AY.44 | 0.000353 |
N | 86 | Y86Y | taC | taT | 54 | 54 | AY.20 | 0.002099 |
N | 86 | Y86Y | taC | taT | 53 | 53 | P.5 | 0.726027 |
N | 86 | Y86Y | taC | taT | 45 | 45 | C.37 | 0.005223 |
N | 86 | Y86Y | taC | taT | 39 | 39 | B.1 | 0.000357 |
N | 86 | Y86Y | taC | taT | 38 | 38 | B.1.1.284 | 0.004081 |
N | 86 | Y86Y | taC | taT | 38 | 38 | B.1.637 | 0.002777 |
N | 86 | Y86Y | taC | taT | 37 | 37 | AY.23 | 0.002581 |
N | 86 | Y86Y | taC | taT | 37 | 37 | AY.34 | 0.003588 |
N | 86 | Y86Y | taC | taT | 37 | 37 | B.1.243 | 0.002575 |
N | 86 | Y86Y | taC | taT | 32 | 32 | B.1.258 | 0.00213 |
N | 86 | Y86Y | taC | taT | 30 | 30 | AY.5 | 0.000619 |
N | 86 | Y86Y | taC | taT | 29 | 29 | B.1.160 | 0.000904 |
N | 86 | Y86Y | taC | taT | 28 | 28 | AY.39 | 0.000692 |
N | 86 | Y86Y | taC | taT | 23 | 23 | AY.6 | 0.000946 |
N | 86 | Y86Y | taC | taT | 23 | 23 | B.1.351 | 0.000684 |
N | 86 | Y86Y | taC | taT | 22 | 22 | AY.26 | 0.000623 |
N | 86 | Y86Y | taC | taT | 21 | 21 | P.1 | 0.000331 |
N | 86 | Y86Y | taC | taT | 20 | 20 | AY.4.2 | 0.000434 |
N | 86 | Y86Y | taC | taT | 19 | 19 | AY.102 | 0.000504 |
N | 86 | Y86Y | taC | taT | 19 | 19 | AY.36 | 0.002816 |
N | 86 | Y86Y | taC | taT | 19 | 19 | B.1.1.519 | 0.000755 |
N | 86 | Y86Y | taC | taT | 18 | 18 | AY.118 | 0.001128 |
N | 86 | Y86Y | taC | taT | 18 | 18 | AY.14 | 0.001584 |
N | 86 | Y86Y | taC | taT | 18 | 18 | AY.42 | 0.000724 |
N | 86 | Y86Y | taC | taT | 17 | 17 | AY.98.1 | 0.000823 |
N | 86 | Y86Y | taC | taT | 17 | 17 | B.1.525 | 0.001924 |
N | 86 | Y86Y | taC | taT | 16 | 16 | B.1.1 | 0.00029 |
N | 86 | Y86Y | taC | taT | 15 | 15 | AY.13 | 0.002415 |
N | 86 | Y86Y | taC | taT | 15 | 15 | AY.39.1 | 0.000594 |
N | 86 | Y86Y | taC | taT | 15 | 15 | AY.9 | 0.001014 |
N | 86 | Y86Y | taC | taT | 15 | 15 | B.1.1.141 | 0.030181 |
N | 86 | Y86Y | taC | taT | 14 | 14 | AY.119 | 0.000494 |
N | 86 | Y86Y | taC | taT | 14 | 14 | B.1.524 | 0.019691 |
N | 86 | Y86Y | taC | taT | 12 | 12 | AY.99.2 | 0.001106 |
N | 86 | Y86Y | taC | taT | 12 | 12 | B.1.221 | 0.000852 |
N | 86 | Y86Y | taC | taT | 11 | 11 | AY.120 | 0.000409 |
N | 86 | Y86Y | taC | taT | 11 | 11 | AY.33 | 0.000735 |
N | 86 | Y86Y | taC | taT | 11 | 11 | AY.4.5 | 0.001182 |
N | 86 | Y86Y | taC | taT | 11 | 11 | B.1.575 | 0.003337 |
N | 86 | Y86Y | taC | taT | 10 | 10 | AY.98 | 0.00079 |
N | 86 | Y86Y | taC | taT | 10 | 10 | B.1.177.21 | 0.000765 |
N | 86 | Y86Y | taC | taT | 9 | 9 | AY.100 | 0.000414 |
N | 86 | Y86Y | taC | taT | 9 | 9 | AY.75 | 0.000504 |
N | 86 | Y86Y | taC | taT | 9 | 9 | B.1.177.60 | 0.001966 |
N | 86 | Y86Y | taC | taT | 9 | 9 | C.36.3 | 0.005105 |
N | 86 | Y86Y | taC | taT | 8 | 8 | AY.46.6 | 0.000578 |
N | 86 | Y86Y | taC | taT | 8 | 8 | AY.9.1 | 0.00067 |
N | 86 | Y86Y | taC | taT | 8 | 8 | B.1.258.17 | 0.000832 |
N | 86 | Y86Y | taC | taT | 8 | 8 | B.1.369 | 0.002282 |
N | 86 | Y86Y | taC | taT | 8 | 8 | B.1.427 | 0.000404 |
N | 86 | Y86Y | taC | taT | 8 | 8 | B.1.619.1 | 0.005131 |
N | 86 | Y86Y | taC | taT | 8 | 8 | B.1.621 | 0.000708 |
N | 86 | Y86Y | taC | taT | 8 | 8 | B.1.628 | 0.002819 |
N | 86 | Y86Y | taC | taT | 8 | 8 | P.4 | 0.030418 |
N | 86 | Y86Y | taC | taT | 7 | 7 | AY.47 | 0.000218 |
N | 86 | Y86Y | taC | taT | 7 | 7 | B.1.1.214 | 0.000388 |
N | 86 | Y86Y | taC | taT | 7 | 7 | B.1.177.58 | 0.009321 |
N | 86 | Y86Y | taC | taT | 7 | 7 | B.1.214.2 | 0.004197 |
N | 86 | Y86Y | taC | taT | 7 | 7 | B.1.596 | 0.00061 |
N | 86 | Y86Y | taC | taT | 7 | 7 | Q.8 | 0.001154 |
N | 86 | Y86Y | taC | taT | 6 | 6 | AY.46.3 | 0.005602 |
N | 86 | Y86Y | taC | taT | 6 | 6 | B.1.1.189 | 0.009077 |
N | 86 | Y86Y | taC | taT | 6 | 6 | B.1.232 | 0.003224 |
N | 86 | Y86Y | taC | taT | 6 | 6 | B.1.595 | 0.001566 |
N | 86 | Y86Y | taC | taT | 6 | 6 | B.1.620 | 0.005676 |
N | 86 | Y86Y | taC | taT | 5 | 5 | AY.113 | 0.000712 |
N | 86 | Y86Y | taC | taT | 5 | 5 | AY.117 | 0.000423 |
N | 86 | Y86Y | taC | taT | 5 | 5 | AY.12 | 0.00158 |
N | 86 | Y86Y | taC | taT | 5 | 5 | AY.3.1 | 0.000426 |
N | 86 | Y86Y | taC | taT | 5 | 5 | AY.46 | 0.00052 |
N | 86 | Y86Y | taC | taT | 5 | 5 | AY.46.4 | 0.000823 |
N | 86 | Y86Y | taC | taT | 5 | 5 | AY.61 | 0.000524 |
N | 86 | Y86Y | taC | taT | 5 | 5 | AY.74 | 0.000578 |
N | 86 | Y86Y | taC | taT | 5 | 5 | B.1.1.348 | 0.003981 |
N | 86 | Y86Y | taC | taT | 5 | 5 | B.1.177.77 | 0.003631 |
N | 86 | Y86Y | taC | taT | 5 | 5 | B.1.177.81 | 0.000947 |
N | 86 | Y86Y | taC | taT | 5 | 5 | B.1.617.1 | 0.000645 |
N | 86 | Y86Y | taC | taT | 5 | 5 | D.2 | 0.000375 |
N | 86 | Y86Y | taC | taT | 5 | 5 | Q.1 | 0.000632 |
N | 86 | Y86Y | taC | taT | 4 | 4 | AY.107 | 0.001864 |
N | 86 | Y86Y | taC | taT | 4 | 4 | AY.27 | 0.000259 |
N | 86 | Y86Y | taC | taT | 4 | 4 | AY.62 | 0.001743 |
N | 86 | Y86Y | taC | taT | 4 | 4 | AY.7.1 | 0.000451 |
N | 86 | Y86Y | taC | taT | 4 | 4 | AY.9.2 | 0.000147 |
N | 86 | Y86Y | taC | taT | 4 | 4 | AY.93 | 0.001092 |
N | 86 | Y86Y | taC | taT | 4 | 4 | B.1.1.157 | 0.003653 |
N | 86 | Y86Y | taC | taT | 4 | 4 | B.1.1.317 | 0.001647 |
N | 86 | Y86Y | taC | taT | 4 | 4 | B.1.1.318 | 0.001207 |
N | 86 | Y86Y | taC | taT | 4 | 4 | B.1.1.464 | 0.005891 |
N | 86 | Y86Y | taC | taT | 4 | 4 | B.1.139 | 0.002933 |
N | 86 | Y86Y | taC | taT | 4 | 4 | B.1.177.10 | 0.003512 |
N | 86 | Y86Y | taC | taT | 4 | 4 | B.1.177.86 | 0.000734 |
N | 86 | Y86Y | taC | taT | 4 | 4 | B.1.234 | 0.000528 |
N | 86 | Y86Y | taC | taT | 4 | 4 | B.1.236 | 0.008214 |
N | 86 | Y86Y | taC | taT | 4 | 4 | B.1.523 | 0.009804 |
N | 86 | Y86Y | taC | taT | 4 | 4 | B.1.617.3 | 0.01194 |
N | 86 | Y86Y | taC | taT | 4 | 4 | B.1.623 | 0.002146 |
N | 86 | Y86Y | taC | taT | 4 | 4 | P.1.1 | 0.001271 |
N | 86 | Y86Y | taC | taT | 3 | 3 | AY.1 | 0.001187 |
N | 86 | Y86Y | taC | taT | 3 | 3 | AY.121 | 0.000406 |
N | 86 | Y86Y | taC | taT | 3 | 3 | AY.35 | 0.000699 |
N | 86 | Y86Y | taC | taT | 3 | 3 | AY.5.3 | 0.001012 |
N | 86 | Y86Y | taC | taT | 3 | 3 | AY.5.4 | 0.00083 |
N | 86 | Y86Y | taC | taT | 3 | 3 | AY.53 | 0.000863 |
N | 86 | Y86Y | taC | taT | 3 | 3 | B | 0.000383 |
N | 86 | Y86Y | taC | taT | 3 | 3 | B.1.1.1 | 0.00098 |
N | 86 | Y86Y | taC | taT | 3 | 3 | B.1.1.10 | 0.003344 |
N | 86 | Y86Y | taC | taT | 3 | 3 | B.1.177.82 | 0.001432 |
N | 86 | Y86Y | taC | taT | 3 | 3 | B.1.177.9 | 0.003995 |
N | 86 | Y86Y | taC | taT | 3 | 3 | B.1.240 | 0.000647 |
N | 86 | Y86Y | taC | taT | 3 | 3 | B.1.367 | 0.002377 |
N | 86 | Y86Y | taC | taT | 3 | 3 | B.1.517 | 0.001281 |
N | 86 | Y86Y | taC | taT | 3 | 3 | B.1.625 | 0.007059 |
N | 86 | Y86Y | taC | taT | 3 | 3 | B.1.93 | 0.002801 |
N | 86 | Y86Y | taC | taT | 3 | 3 | B.4.2 | 0.2 |
N | 86 | Y86Y | taC | taT | 3 | 3 | C.38 | 0.024194 |
N | 86 | Y86Y | taC | taT | 3 | 3 | P.1.7 | 0.000958 |
N | 86 | Y86Y | taC | taT | 3 | 3 | P.3 | 0.004785 |
N | 86 | Y86Y | taC | taT | 2 | 2 | AY.109 | 0.001479 |
N | 86 | Y86Y | taC | taT | 2 | 2 | AY.16 | 0.000759 |
N | 86 | Y86Y | taC | taT | 2 | 2 | AY.16.1 | 0.00094 |
N | 86 | Y86Y | taC | taT | 2 | 2 | AY.23.1 | 0.000835 |
N | 86 | Y86Y | taC | taT | 2 | 2 | AY.30 | 0.000791 |
N | 86 | Y86Y | taC | taT | 2 | 2 | AY.45 | 0.000243 |
N | 86 | Y86Y | taC | taT | 2 | 2 | AY.82 | 0.002714 |
N | 86 | Y86Y | taC | taT | 2 | 2 | AY.94 | 0.000885 |
N | 86 | Y86Y | taC | taT | 2 | 2 | B.1.1.153 | 0.002191 |
N | 86 | Y86Y | taC | taT | 2 | 2 | B.1.1.186 | 0.006873 |
N | 86 | Y86Y | taC | taT | 2 | 2 | B.1.1.222 | 0.000408 |
N | 86 | Y86Y | taC | taT | 2 | 2 | B.1.1.240 | 0.00939 |
N | 86 | Y86Y | taC | taT | 2 | 2 | B.1.1.266 | 0.02439 |
N | 86 | Y86Y | taC | taT | 2 | 2 | B.1.1.269 | 0.002706 |
N | 86 | Y86Y | taC | taT | 2 | 2 | B.1.1.28 | 0.000622 |
N | 86 | Y86Y | taC | taT | 2 | 2 | B.1.1.311 | 0.000716 |
N | 86 | Y86Y | taC | taT | 2 | 2 | B.1.1.33 | 0.000842 |
N | 86 | Y86Y | taC | taT | 2 | 2 | B.1.1.372 | 0.001377 |
N | 86 | Y86Y | taC | taT | 2 | 2 | B.1.1.462 | 0.017241 |
N | 86 | Y86Y | taC | taT | 2 | 2 | B.1.1.50 | 0.001358 |
N | 86 | Y86Y | taC | taT | 2 | 2 | B.1.1.51 | 0.003436 |
N | 86 | Y86Y | taC | taT | 2 | 2 | B.1.1.528 | 0.009615 |
N | 86 | Y86Y | taC | taT | 2 | 2 | B.1.1.63 | 0.000772 |
N | 86 | Y86Y | taC | taT | 2 | 2 | B.1.110.3 | 0.001437 |
N | 86 | Y86Y | taC | taT | 2 | 2 | B.1.160.16 | 0.001859 |
N | 86 | Y86Y | taC | taT | 2 | 2 | B.1.177.20 | 0.003035 |
N | 86 | Y86Y | taC | taT | 2 | 2 | B.1.177.5 | 0.002484 |
N | 86 | Y86Y | taC | taT | 2 | 2 | B.1.177.65 | 0.001331 |
N | 86 | Y86Y | taC | taT | 2 | 2 | B.1.177.7 | 0.00033 |
N | 86 | Y86Y | taC | taT | 2 | 2 | B.1.177.83 | 0.002963 |
N | 86 | Y86Y | taC | taT | 2 | 2 | B.1.241 | 0.001623 |
N | 86 | Y86Y | taC | taT | 2 | 2 | B.1.348 | 0.036364 |
N | 86 | Y86Y | taC | taT | 2 | 2 | B.1.397 | 0.009709 |
N | 86 | Y86Y | taC | taT | 2 | 2 | B.1.438.1 | 0.000215 |
N | 86 | Y86Y | taC | taT | 2 | 2 | B.1.466.2 | 0.000782 |
N | 86 | Y86Y | taC | taT | 2 | 2 | B.1.497 | 0.00063 |
N | 86 | Y86Y | taC | taT | 2 | 2 | B.1.560 | 0.009259 |
N | 86 | Y86Y | taC | taT | 2 | 2 | B.1.574 | 0.004301 |
N | 86 | Y86Y | taC | taT | 2 | 2 | B.1.626 | 0.011429 |
N | 86 | Y86Y | taC | taT | 2 | 2 | B.40 | 0.000729 |
N | 86 | Y86Y | taC | taT | 2 | 2 | C.20 | 0.153846 |
N | 86 | Y86Y | taC | taT | 2 | 2 | N.5 | 0.003534 |
N | 86 | Y86Y | taC | taT | 2 | 2 | P.1.14 | 0.000096 |
N | 86 | Y86Y | taC | taT | 2 | 2 | Q.4 | 0.00091 |
N | 86 | Y86Y | taC | taT | 2 | 2 | R.1 | 0.00018 |
N | 86 | Y86Y | taC | taT | 2 | 2 | W.3 | 0.010526 |
N | 86 | Y86Y | taC | taT | 1 | 1 | A | 0.000387 |
N | 86 | Y86Y | taC | taT | 1 | 1 | A.2.5 | 0.000499 |
N | 86 | Y86Y | taC | taT | 1 | 1 | AD.2 | 0.000219 |
N | 86 | Y86Y | taC | taT | 1 | 1 | AM.2 | 0.111111 |
N | 86 | Y86Y | taC | taT | 1 | 1 | AP.1 | 0.001502 |
N | 86 | Y86Y | taC | taT | 1 | 1 | AY.104 | 0.001984 |
N | 86 | Y86Y | taC | taT | 1 | 1 | AY.105 | 0.000643 |
N | 86 | Y86Y | taC | taT | 1 | 1 | AY.108 | 0.001103 |
N | 86 | Y86Y | taC | taT | 1 | 1 | AY.110 | 0.000113 |
N | 86 | Y86Y | taC | taT | 1 | 1 | AY.116 | 0.000287 |
N | 86 | Y86Y | taC | taT | 1 | 1 | AY.116.1 | 0.000311 |
N | 86 | Y86Y | taC | taT | 1 | 1 | AY.21 | 0.001898 |
N | 86 | Y86Y | taC | taT | 1 | 1 | AY.37 | 0.000316 |
N | 86 | Y86Y | taC | taT | 1 | 1 | AY.39.1.1 | 0.000725 |
N | 86 | Y86Y | taC | taT | 1 | 1 | AY.4.2.1 | 0.000149 |
N | 86 | Y86Y | taC | taT | 1 | 1 | AY.40 | 0.000964 |
N | 86 | Y86Y | taC | taT | 1 | 1 | AY.71 | 0.000475 |
N | 86 | Y86Y | taC | taT | 1 | 1 | AY.75.1 | 0.00018 |
N | 86 | Y86Y | taC | taT | 1 | 1 | AY.85 | 0.000427 |
N | 86 | Y86Y | taC | taT | 1 | 1 | AY.90 | 0.000684 |
N | 86 | Y86Y | taC | taT | 1 | 1 | AY.91 | 0.00073 |
N | 86 | Y86Y | taC | taT | 1 | 1 | AY.92 | 0.000287 |
N | 86 | Y86Y | taC | taT | 1 | 1 | AZ.1 | 0.000867 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.1.111 | 0.014706 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.1.123 | 0.017857 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.1.180 | 0.010753 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.1.207 | 0.001182 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.1.216 | 0.00089 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.1.219 | 0.005 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.1.220 | 0.001859 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.1.230 | 0.009174 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.1.25 | 0.000569 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.1.251 | 0.007937 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.1.277 | 0.000759 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.1.280 | 0.003086 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.1.294 | 0.001266 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.1.312 | 0.001912 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.1.320 | 0.018182 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.1.337 | 0.003597 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.1.349 | 0.010309 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.1.37 | 0.000193 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.1.389 | 0.006061 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.1.391 | 0.008547 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.1.398 | 0.003226 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.1.416 | 0.000905 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.1.434 | 0.000349 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.1.49 | 0.017544 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.1.70 | 0.000341 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.177.12 | 0.000152 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.177.16 | 0.000664 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.177.17 | 0.000821 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.177.3 | 0.007634 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.177.45 | 0.000381 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.177.52 | 0.001757 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.177.54 | 0.000606 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.177.55 | 0.002331 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.177.57 | 0.000281 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.177.62 | 0.001192 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.177.73 | 0.000566 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.221.3 | 0.000833 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.222 | 0.001692 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.23 | 0.006061 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.243.2 | 0.014493 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.250 | 0.014493 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.258.14 | 0.00098 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.298 | 0.002114 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.323 | 0.020833 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.324 | 0.001605 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.337 | 0.005587 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.349 | 0.000715 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.36 | 0.000146 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.36.16 | 0.001425 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.36.35 | 0.002604 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.385 | 0.010638 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.400 | 0.000429 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.404 | 0.001302 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.426 | 0.001009 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.470 | 0.001404 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.499 | 0.00105 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.561 | 0.000397 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.564 | 0.000426 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.577 | 0.000687 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.582 | 0.000491 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.606 | 0.006024 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.619 | 0.000871 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.621.1 | 0.000506 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.1.88.1 | 0.004808 |
N | 86 | Y86Y | taC | taT | 1 | 1 | B.3.1 | 0.001658 |
N | 86 | Y86Y | taC | taT | 1 | 1 | C.1 | 0.002392 |
N | 86 | Y86Y | taC | taT | 1 | 1 | C.14 | 0.004329 |
N | 86 | Y86Y | taC | taT | 1 | 1 | C.35 | 0.000774 |
N | 86 | Y86Y | taC | taT | 1 | 1 | D.3 | 0.005917 |
N | 86 | Y86Y | taC | taT | 1 | 1 | K.1 | 0.02381 |
N | 86 | Y86Y | taC | taT | 1 | 1 | N.4 | 0.004255 |
N | 86 | Y86Y | taC | taT | 1 | 1 | P.1.12 | 0.000484 |
N | 86 | Y86Y | taC | taT | 1 | 1 | P.1.13 | 0.000898 |
N | 86 | Y86Y | taC | taT | 1 | 1 | P.1.16 | 0.000374 |
N | 86 | Y86Y | taC | taT | 1 | 1 | P.1.17 | 0.000162 |
N | 86 | Y86Y | taC | taT | 1 | 1 | P.7 | 0.004367 |
N | 86 | Y86Y | taC | taT | 1 | 1 | Q.3 | 0.000145 |
N | 86 | Y86Y | taC | taT | 1 | 1 | W.4 | 0.001351 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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