CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : CodonNum = 83

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N83Q83QsyncaAcaG998998128520-28522
N83Q83RnonsyncAacGa240240128520-28522
N83Q83KnonsynCaaAaa232232128520-28522
N83Q83HnonsyncaAcaC76610.80263228520-28522
N83Q83HnonsyncaAcaT76150.19736828520-28522
N83Q83XnonsynCaaTaa21160.76190528520-28522
N83Q83XnonsynCAaTGa2150.23809528520-28522
N83Q83EnonsynCaaGaa1515128520-28522
N83Q83deldelCAA---88128520-28522
N83Q83del1delcAac-a640.66666728520-28522
N83Q83del1delCaa-aa620.33333328520-28522
N83Q83AnonsynCAAGCC11128520-28522
N83Q83NnonsynCaAAaT11128520-28522
N83Q83del2delcAAc--11128520-28522
N83Q83LnonsyncAAcTG11128520-28522
N83Q83PnonsyncAacCa11128520-28522

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N83Q83QcaAcaG998998All0.000191
N83Q83QcaAcaG699699B.1.617.20.002632
N83Q83RcAacGa240240All0.000046
N83Q83KCaaAaa232232All0.000044
N83Q83QcaAcaG145145AY.980.011454
N83Q83RcAacGa130130B.1.36.330.984848
N83Q83HcaAcaC6176All0.000012
N83Q83HcaAcaT1576All0.000003
N83Q83QcaAcaG6666AY.4.20.001431
N83Q83KCaaAaa6464B.1.6210.005665
N83Q83KCaaAaa4242B.1.2430.002923
N83Q83RcAacGa3737B.1.1600.001154
N83Q83KCaaAaa3333AY.390.000815
N83Q83HcaAcaC2727B.1.1600.000842
N83Q83KCaaAaa2424B.10.00022
N83Q83XCaaTaa1621All0.000003
N83Q83XCAaTGa521All0.000001
N83Q83QcaAcaG1818B.1.1.5190.000715
N83Q83ECaaGaa1515All0.000003
N83Q83RcAacGa1414B.1.360.002043
N83Q83KCaaAaa1010B.1.1.2940.012658
N83Q83KCaaAaa1010B.1.1770.000132
N83Q83QcaAcaG99AY.40.000014
N83Q83delCAA---88All0.000002
N83Q83ECaaGaa88AY.230.000558
N83Q83HcaAcaC77AY.4.20.000152
N83Q83del1cAac-a46All0.000001
N83Q83del1Caa-aa26All0
N83Q83RcAacGa66AY.430.000027
N83Q83QcaAcaG66B.1.1.1570.005479
N83Q83QcaAcaG66B.1.1.70.000005
N83Q83HcaAcaT36B.1.1.70.000003
N83Q83HcaAcaC36B.1.1.70.000003
N83Q83KCaaAaa55AY.40.000008
N83Q83XCaaTaa55B.10.000046
N83Q83QcaAcaG55B.10.000046
N83Q83HcaAcaT55B.1.5260.000118
N83Q83XCAaTGa440.222222
N83Q83RcAacGa440.222222
N83Q83QcaAcaG44B.1.10.000073
N83Q83KCaaAaa44B.1.1.2140.000222
N83Q83QcaAcaG44B.1.1.2220.000816
N83Q83RcAacGa44B.1.1.70.000004
N83Q83XCaaTaa34B.1.1.70.000003
N83Q83XCAaTGa14B.1.1.70.000001
N83Q83HcaAcaC34B.1.617.20.000011
N83Q83HcaAcaT14B.1.617.20.000004
N83Q83HcaAcaC33AY.260.000085
N83Q83QcaAcaG33AY.260.000085
N83Q83RcAacGa33AY.30.00003
N83Q83HcaAcaC33AY.390.000074
N83Q83QcaAcaG33AY.460.000312
N83Q83HcaAcaC33AY.610.000314
N83Q83QcaAcaG33AY.70.000588
N83Q83RcAacGa33AY.75.10.000541
N83Q83del1Caa-aa23B.10.000018
N83Q83HcaAcaC23B.10.000018
N83Q83del1cAac-a13B.10.000009
N83Q83HcaAcaT13B.10.000009
N83Q83KCaaAaa33B.1.10.000054
N83Q83KCaaAaa22A.2.5.20.003145
N83Q83RcAacGa22AY.1030.000012
N83Q83RcAacGa22AY.4.20.000043
N83Q83KCaaAaa22AY.440.000012
N83Q83RcAacGa22AY.440.000012
N83Q83QcaAcaG22AY.740.000231
N83Q83RcAacGa22B.10.000018
N83Q83ECaaGaa22B.1.10.000036
N83Q83RcAacGa22B.1.10.000036
N83Q83RcAacGa22B.1.1.1590.009346
N83Q83KCaaAaa22B.1.1.3740.004751
N83Q83KCaaAaa22B.1.1.4660.017391
N83Q83RcAacGa22B.1.1.630.000772
N83Q83KCaaAaa22B.1.1600.000062
N83Q83KCaaAaa22B.1.36.90.006431
N83Q83KCaaAaa22B.1.4290.000047
N83Q83HcaAcaC22B.1.5820.000981
N83Q83KCaaAaa22B.1.617.20.000008
N83Q83RcAacGa22B.1.617.20.000008
N83Q83RcAacGa22B.1.6210.000177
N83Q83QcaAcaG22P.10.000032
N83Q83HcaAcaT22P.10.000032
N83Q83RcAacGa11A.190.009434
N83Q83PcAacCa11All0
N83Q83LcAAcTG11All0
N83Q83ACAAGCC11All0
N83Q83NCaAAaT11All0
N83Q83del2cAAc--11All0
N83Q83XCaaTaa11AU.10.001266
N83Q83RcAacGa11AY.1000.000046
N83Q83QcaAcaG11AY.1000.000046
N83Q83KCaaAaa11AY.1030.000006
N83Q83HcaAcaC11AY.1130.000142
N83Q83QcaAcaG11AY.1140.000231
N83Q83KCaaAaa11AY.1170.000085
N83Q83KCaaAaa11AY.1200.000037
N83Q83KCaaAaa11AY.140.000088
N83Q83KCaaAaa11AY.160.00038
N83Q83KCaaAaa11AY.200.000039
N83Q83HcaAcaT11AY.230.00007
N83Q83RcAacGa11AY.230.00007
N83Q83RcAacGa11AY.250.000006
N83Q83QcaAcaG11AY.250.000006
N83Q83RcAacGa11AY.290.000016
N83Q83KCaaAaa11AY.30.00001
N83Q83QcaAcaG11AY.30.00001
N83Q83delCAA---11AY.30.00001
N83Q83HcaAcaC11AY.30.00001
N83Q83ECaaGaa11AY.30.00001
N83Q83QcaAcaG11AY.390.000025
N83Q83ECaaGaa11AY.40.000002
N83Q83HcaAcaC11AY.40.000002
N83Q83RcAacGa11AY.40.000002
N83Q83NCaAAaT11AY.400.000964
N83Q83QcaAcaG11AY.410.000294
N83Q83ECaaGaa11AY.430.000004
N83Q83QcaAcaG11AY.430.000004
N83Q83LcAAcTG11AY.430.000004
N83Q83KCaaAaa11AY.430.000004
N83Q83HcaAcaC11AY.430.000004
N83Q83HcaAcaT11AY.440.000006
N83Q83QcaAcaG11AY.440.000006
N83Q83QcaAcaG11AY.46.20.000635
N83Q83QcaAcaG11AY.46.40.000165
N83Q83KCaaAaa11AY.46.60.000072
N83Q83QcaAcaG11AY.50.000021
N83Q83RcAacGa11AY.50.000021
N83Q83QcaAcaG11AY.610.000105
N83Q83XCaaTaa11AY.620.000436
N83Q83delCAA---11AY.670.000464
N83Q83del2cAAc--11AY.670.000464
N83Q83QcaAcaG11AY.730.000665
N83Q83QcaAcaG11AY.850.000427
N83Q83HcaAcaC11AY.9.20.000037
N83Q83QcaAcaG11AY.9.20.000037
N83Q83QcaAcaG11AY.910.00073
N83Q83XCaaTaa11AY.920.000287
N83Q83QcaAcaG11AY.950.000761
N83Q83RcAacGa11AY.980.000079
N83Q83KCaaAaa11AY.980.000079
N83Q83QcaAcaG11AY.98.10.000048
N83Q83HcaAcaC11AY.98.10.000048
N83Q83delCAA---11B.1.10.000018
N83Q83QcaAcaG11B.1.1.1410.002012
N83Q83del1cAac-a11B.1.1.2200.001859
N83Q83RcAacGa11B.1.1.250.000569
N83Q83KCaaAaa11B.1.1.3170.000412
N83Q83RcAacGa11B.1.1.3280.016949
N83Q83KCaaAaa11B.1.1.3980.003226
N83Q83KCaaAaa11B.1.1.4200.001006
N83Q83ECaaGaa11B.1.1.70.000001
N83Q83del1cAac-a11B.1.1.70.000001
N83Q83delCAA---11B.1.1.70.000001
N83Q83KCaaAaa11B.1.1.70.000001
N83Q83RcAacGa11B.1.120.008
N83Q83PcAacCa11B.1.1600.000031
N83Q83RcAacGa11B.1.160.190.035714
N83Q83RcAacGa11B.1.1770.000013
N83Q83QcaAcaG11B.1.177.430.001477
N83Q83delCAA---11B.1.177.630.002703
N83Q83XCaaTaa11B.1.20.000009
N83Q83RcAacGa11B.1.20.000009
N83Q83KCaaAaa11B.1.20.000009
N83Q83QcaAcaG11B.1.20.000009
N83Q83RcAacGa11B.1.2210.000071
N83Q83del1cAac-a11B.1.2210.000071
N83Q83QcaAcaG11B.1.2210.000071
N83Q83XCaaTaa11B.1.2340.000132
N83Q83RcAacGa11B.1.2430.00007
N83Q83KCaaAaa11B.1.243.10.022222
N83Q83KCaaAaa11B.1.258.170.000104
N83Q83ECaaGaa11B.1.258.170.000104
N83Q83KCaaAaa11B.1.36.290.000517
N83Q83delCAA---11B.1.4150.014286
N83Q83RcAacGa11B.1.4270.00005
N83Q83delCAA---11B.1.4270.00005
N83Q83HcaAcaC11B.1.4270.00005
N83Q83XCaaTaa11B.1.4290.000024
N83Q83QcaAcaG11B.1.4590.004082
N83Q83RcAacGa11B.1.466.20.000391
N83Q83RcAacGa11B.1.5510.00129
N83Q83HcaAcaC11B.1.6000.005848
N83Q83XCaaTaa11B.1.617.20.000004
N83Q83ACAAGCC11B.1.617.20.000004
N83Q83RcAacGa11B.400.000364
N83Q83KCaaAaa11B.60.00091
N83Q83XCaaTaa11D.20.000075
N83Q83KCaaAaa11D.20.000075
N83Q83delCAA---11P.10.000016
N83Q83RcAacGa11P.10.000016
N83Q83KCaaAaa11P.1.10.000318
N83Q83HcaAcaT11P.1.10.000318