CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
N | 67 | P67S | nonsyn | Cct | Tct | 126448 | 126441 | 0.999945 | 28472-28474 | |
N | 67 | P67S | nonsyn | CcT | TcC | 126448 | 4 | 0.0000316336 | 28472-28474 | |
N | 67 | P67S | nonsyn | CcT | TcG | 126448 | 2 | 0.0000158168 | 28472-28474 | |
N | 67 | P67S | nonsyn | CcT | TcA | 126448 | 1 | 0.00000790839 | 28472-28474 | |
N | 67 | P67L | nonsyn | cCt | cTt | 2641 | 2631 | 0.996214 | 28472-28474 | |
N | 67 | P67L | nonsyn | cCT | cTC | 2641 | 8 | 0.00302916 | 28472-28474 | |
N | 67 | P67L | nonsyn | cCT | cTG | 2641 | 2 | 0.000757289 | 28472-28474 | |
N | 67 | P67P | syn | ccT | ccC | 1103 | 782 | 0.708975 | 28472-28474 | |
N | 67 | P67P | syn | ccT | ccA | 1103 | 263 | 0.238441 | 28472-28474 | |
N | 67 | P67P | syn | ccT | ccG | 1103 | 58 | 0.0525839 | 28472-28474 | |
N | 67 | P67H | nonsyn | cCt | cAt | 481 | 480 | 0.997921 | 28472-28474 | |
N | 67 | P67H | nonsyn | cCT | cAC | 481 | 1 | 0.002079 | 28472-28474 | |
N | 67 | P67R | nonsyn | cCt | cGt | 190 | 187 | 0.984211 | 28472-28474 | |
N | 67 | P67R | nonsyn | cCT | cGA | 190 | 2 | 0.0105263 | 28472-28474 | |
N | 67 | P67R | nonsyn | cCT | cGC | 190 | 1 | 0.00526316 | 28472-28474 | |
N | 67 | P67T | nonsyn | Cct | Act | 134 | 134 | 1 | 28472-28474 | |
N | 67 | P67F | nonsyn | CCt | TTt | 90 | 90 | 1 | 28472-28474 | |
N | 67 | P67A | nonsyn | Cct | Gct | 31 | 28 | 0.903226 | 28472-28474 | |
N | 67 | P67A | nonsyn | CcT | GcG | 31 | 2 | 0.0645161 | 28472-28474 | |
N | 67 | P67A | nonsyn | CcT | GcA | 31 | 1 | 0.0322581 | 28472-28474 | |
N | 67 | P67del | del | CCT | --- | 23 | 23 | 1 | 28472-28474 | |
N | 67 | P67Y | nonsyn | CCt | TAt | 8 | 8 | 1 | 28472-28474 | |
N | 67 | P67V | nonsyn | CCt | GTt | 3 | 2 | 0.666667 | 28472-28474 | |
N | 67 | P67V | nonsyn | CCT | GTA | 3 | 1 | 0.333333 | 28472-28474 | |
N | 67 | P67C | nonsyn | CCt | TGt | 2 | 2 | 1 | 28472-28474 | |
N | 67 | P67D | nonsyn | CCt | GAt | 2 | 2 | 1 | 28472-28474 | |
N | 67 | P67E | nonsyn | CCT | GAA | 1 | 1 | 1 | 28472-28474 | |
N | 67 | P67Q | nonsyn | cCT | cAA | 1 | 1 | 1 | 28472-28474 | |
N | 67 | P67G | nonsyn | CCT | GGA | 1 | 1 | 1 | 28472-28474 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
N | 67 | P67S | Cct | Tct | 126441 | 126448 | All | 0.024183 |
N | 67 | P67S | CcT | TcC | 4 | 126448 | All | 0.000001 |
N | 67 | P67S | CcT | TcG | 2 | 126448 | All | 0 |
N | 67 | P67S | CcT | TcA | 1 | 126448 | All | 0 |
N | 67 | P67S | Cct | Tct | 110301 | 110307 | B.1.2 | 0.971242 |
N | 67 | P67S | CcT | TcC | 3 | 110307 | B.1.2 | 0.000026 |
N | 67 | P67S | CcT | TcG | 2 | 110307 | B.1.2 | 0.000018 |
N | 67 | P67S | CcT | TcA | 1 | 110307 | B.1.2 | 0.000009 |
N | 67 | P67S | Cct | Tct | 10133 | 10133 | B.1.596 | 0.882973 |
N | 67 | P67L | cCt | cTt | 2631 | 2641 | All | 0.000503 |
N | 67 | P67L | cCT | cTC | 8 | 2641 | All | 0.000002 |
N | 67 | P67L | cCT | cTG | 2 | 2641 | All | 0 |
N | 67 | P67S | Cct | Tct | 2462 | 2462 | B.1 | 0.022551 |
N | 67 | P67P | ccT | ccC | 782 | 1103 | All | 0.00015 |
N | 67 | P67P | ccT | ccA | 263 | 1103 | All | 0.00005 |
N | 67 | P67P | ccT | ccG | 58 | 1103 | All | 0.000011 |
N | 67 | P67L | cCt | cTt | 961 | 961 | B.1.1.7 | 0.00086 |
N | 67 | P67H | cCt | cAt | 480 | 481 | All | 0.000092 |
N | 67 | P67H | cCT | cAC | 1 | 481 | All | 0 |
N | 67 | P67S | Cct | Tct | 395 | 395 | B.1.1.7 | 0.000354 |
N | 67 | P67S | Cct | Tct | 327 | 327 | B.1.617.3 | 0.976119 |
N | 67 | P67S | Cct | Tct | 246 | 246 | AH.3 | 0.935361 |
N | 67 | P67L | cCt | cTt | 244 | 244 | B.1.177.81 | 0.046195 |
N | 67 | P67S | Cct | Tct | 203 | 203 | B.1.561 | 0.080588 |
N | 67 | P67R | cCt | cGt | 187 | 190 | All | 0.000036 |
N | 67 | P67R | cCT | cGA | 2 | 190 | All | 0 |
N | 67 | P67R | cCT | cGC | 1 | 190 | All | 0 |
N | 67 | P67H | cCt | cAt | 188 | 188 | AD.2 | 0.041165 |
N | 67 | P67S | Cct | Tct | 187 | 187 | B.1.1 | 0.003392 |
N | 67 | P67P | ccT | ccC | 168 | 176 | AY.4 | 0.000261 |
N | 67 | P67P | ccT | ccG | 4 | 176 | AY.4 | 0.000006 |
N | 67 | P67P | ccT | ccA | 4 | 176 | AY.4 | 0.000006 |
N | 67 | P67P | ccT | ccA | 127 | 170 | AY.3 | 0.001263 |
N | 67 | P67P | ccT | ccC | 42 | 170 | AY.3 | 0.000418 |
N | 67 | P67P | ccT | ccG | 1 | 170 | AY.3 | 0.00001 |
N | 67 | P67R | cCt | cGt | 155 | 155 | B.1.609 | 0.074305 |
N | 67 | P67P | ccT | ccC | 143 | 143 | B.1.1.214 | 0.00793 |
N | 67 | P67S | Cct | Tct | 136 | 136 | AY.43 | 0.000603 |
N | 67 | P67T | Cct | Act | 134 | 134 | All | 0.000026 |
N | 67 | P67S | Cct | Tct | 121 | 121 | B.1.595 | 0.031576 |
N | 67 | P67L | cCt | cTt | 113 | 113 | B.1.617.2 | 0.000425 |
N | 67 | P67L | cCt | cTt | 108 | 108 | B.1.351 | 0.00321 |
N | 67 | P67S | Cct | Tct | 107 | 107 | B.1.527 | 0.396296 |
N | 67 | P67S | Cct | Tct | 93 | 93 | AY.25 | 0.000559 |
N | 67 | P67F | CCt | TTt | 90 | 90 | All | 0.000017 |
N | 67 | P67L | cCt | cTt | 88 | 88 | B.1.36.18 | 0.036975 |
N | 67 | P67F | CCt | TTt | 87 | 87 | B.1.2 | 0.000766 |
N | 67 | P67P | ccT | ccC | 63 | 80 | B.1.1.7 | 0.000056 |
N | 67 | P67P | ccT | ccG | 14 | 80 | B.1.1.7 | 0.000013 |
N | 67 | P67P | ccT | ccA | 3 | 80 | B.1.1.7 | 0.000003 |
N | 67 | P67S | Cct | Tct | 79 | 79 | B.1.617.2 | 0.000297 |
N | 67 | P67L | cCt | cTt | 78 | 78 | AY.4 | 0.000121 |
N | 67 | P67S | Cct | Tct | 68 | 68 | B.1.621 | 0.006019 |
N | 67 | P67L | cCt | cTt | 67 | 67 | AY.5 | 0.001383 |
N | 67 | P67S | Cct | Tct | 60 | 60 | AY.3 | 0.000597 |
N | 67 | P67L | cCt | cTt | 58 | 58 | B.1.177.43 | 0.085672 |
N | 67 | P67P | ccT | ccC | 30 | 57 | B.1.617.2 | 0.000113 |
N | 67 | P67P | ccT | ccA | 24 | 57 | B.1.617.2 | 0.00009 |
N | 67 | P67P | ccT | ccG | 3 | 57 | B.1.617.2 | 0.000011 |
N | 67 | P67S | Cct | Tct | 56 | 56 | AY.44 | 0.000341 |
N | 67 | P67S | Cct | Tct | 48 | 48 | AY.4 | 0.000075 |
N | 67 | P67L | cCt | cTt | 47 | 47 | AY.103 | 0.000292 |
N | 67 | P67S | Cct | Tct | 47 | 47 | B.1.429 | 0.001106 |
N | 67 | P67S | Cct | Tct | 46 | 46 | B.1.580 | 0.186992 |
N | 67 | P67S | Cct | Tct | 44 | 44 | B.1.177 | 0.000579 |
N | 67 | P67P | ccT | ccC | 43 | 43 | AY.47 | 0.001338 |
N | 67 | P67L | cCt | cTt | 42 | 42 | AY.43 | 0.000186 |
N | 67 | P67L | cCt | cTt | 42 | 42 | B.1.177 | 0.000553 |
N | 67 | P67S | Cct | Tct | 42 | 42 | B.1.177.73 | 0.023783 |
N | 67 | P67L | cCt | cTt | 42 | 42 | B.1.221 | 0.002983 |
N | 67 | P67S | Cct | Tct | 42 | 42 | B.1.234 | 0.005542 |
N | 67 | P67S | Cct | Tct | 42 | 42 | B.1.258.23 | 1 |
N | 67 | P67L | cCt | cTt | 42 | 42 | B.1.526 | 0.000987 |
N | 67 | P67L | cCt | cTt | 35 | 41 | B.1.1.519 | 0.00139 |
N | 67 | P67L | cCT | cTC | 6 | 41 | B.1.1.519 | 0.000238 |
N | 67 | P67S | Cct | Tct | 40 | 40 | B.1.1.519 | 0.001588 |
N | 67 | P67P | ccT | ccA | 40 | 40 | B.1.177.86 | 0.007338 |
N | 67 | P67S | Cct | Tct | 40 | 40 | C.23 | 0.232558 |
N | 67 | P67L | cCt | cTt | 37 | 37 | P.1 | 0.000583 |
N | 67 | P67T | Cct | Act | 35 | 35 | B.1 | 0.000321 |
N | 67 | P67S | Cct | Tct | 35 | 35 | B.1.221 | 0.002486 |
N | 67 | P67L | cCt | cTt | 35 | 35 | P.1.10 | 0.009431 |
N | 67 | P67L | cCt | cTt | 34 | 34 | AY.44 | 0.000207 |
N | 67 | P67L | cCt | cTt | 33 | 33 | AY.25 | 0.000198 |
N | 67 | P67H | cCt | cAt | 33 | 33 | B.1.1.7 | 0.00003 |
N | 67 | P67A | Cct | Gct | 28 | 31 | All | 0.000005 |
N | 67 | P67A | CcT | GcG | 2 | 31 | All | 0 |
N | 67 | P67A | CcT | GcA | 1 | 31 | All | 0 |
N | 67 | P67P | ccT | ccC | 31 | 31 | AY.70 | 0.006464 |
N | 67 | P67S | Cct | Tct | 31 | 31 | P.1.17 | 0.005015 |
N | 67 | P67S | Cct | Tct | 30 | 30 | AY.116.1 | 0.009343 |
N | 67 | P67L | cCt | cTt | 30 | 30 | B.1 | 0.000275 |
N | 67 | P67H | cCt | cAt | 30 | 30 | B.1.617.2 | 0.000113 |
N | 67 | P67H | cCt | cAt | 29 | 29 | AY.109 | 0.02145 |
N | 67 | P67S | Cct | Tct | 29 | 29 | AY.45 | 0.003529 |
N | 67 | P67H | cCt | cAt | 29 | 29 | P.1 | 0.000457 |
N | 67 | P67S | Cct | Tct | 28 | 28 | AY.36 | 0.00415 |
N | 67 | P67S | Cct | Tct | 26 | 26 | AY.103 | 0.000161 |
N | 67 | P67S | Cct | Tct | 26 | 26 | AY.26 | 0.000736 |
N | 67 | P67H | cCt | cAt | 26 | 26 | AY.4.2 | 0.000564 |
N | 67 | P67S | Cct | Tct | 25 | 25 | B.1.243 | 0.00174 |
N | 67 | P67P | ccT | ccC | 22 | 24 | AY.44 | 0.000134 |
N | 67 | P67P | ccT | ccA | 2 | 24 | AY.44 | 0.000012 |
N | 67 | P67del | CCT | --- | 23 | 23 | All | 0.000004 |
N | 67 | P67S | Cct | Tct | 23 | 23 | B.1.1.335 | 0.298701 |
N | 67 | P67S | Cct | Tct | 23 | 23 | B.1.369 | 0.00656 |
N | 67 | P67S | Cct | Tct | 23 | 23 | B.1.400 | 0.009867 |
N | 67 | P67L | cCt | cTt | 22 | 22 | AY.102 | 0.000583 |
N | 67 | P67L | cCt | cTt | 21 | 22 | B.1.160 | 0.000655 |
N | 67 | P67L | cCT | cTC | 1 | 22 | B.1.160 | 0.000031 |
N | 67 | P67P | ccT | ccC | 22 | 22 | B.1.177.18 | 0.025522 |
N | 67 | P67L | cCt | cTt | 22 | 22 | B.1.177.51 | 0.100457 |
N | 67 | P67L | cCt | cTt | 21 | 21 | AY.3 | 0.000209 |
N | 67 | P67S | Cct | Tct | 21 | 21 | P.1 | 0.000331 |
N | 67 | P67T | Cct | Act | 19 | 19 | B.1.1.7 | 0.000017 |
N | 67 | P67S | Cct | Tct | 19 | 19 | B.1.111 | 0.022327 |
N | 67 | P67S | Cct | Tct | 19 | 19 | P.1.14 | 0.000908 |
N | 67 | P67P | ccT | ccC | 17 | 18 | AY.25 | 0.000102 |
N | 67 | P67P | ccT | ccG | 1 | 18 | AY.25 | 0.000006 |
N | 67 | P67L | cCt | cTt | 18 | 18 | B.1.1 | 0.000327 |
N | 67 | P67T | Cct | Act | 17 | 17 | AY.5 | 0.000351 |
N | 67 | P67S | Cct | Tct | 16 | 16 | AY.29 | 0.000252 |
N | 67 | P67H | cCt | cAt | 16 | 16 | AY.4 | 0.000025 |
N | 67 | P67L | cCt | cTt | 16 | 16 | Q.1 | 0.002021 |
N | 67 | P67L | cCt | cTt | 15 | 15 | AY.75 | 0.00084 |
N | 67 | P67P | ccT | ccC | 14 | 15 | P.1 | 0.000221 |
N | 67 | P67P | ccT | ccG | 1 | 15 | P.1 | 0.000016 |
N | 67 | P67S | Cct | Tct | 14 | 14 | B.1.1.241 | 0.028986 |
N | 67 | P67L | cCt | cTt | 14 | 14 | B.1.1.63 | 0.005401 |
N | 67 | P67S | Cct | Tct | 14 | 14 | B.1.206 | 0.011419 |
N | 67 | P67S | Cct | Tct | 14 | 14 | B.1.258 | 0.000932 |
N | 67 | P67S | Cct | Tct | 14 | 14 | B.1.361 | 0.018041 |
N | 67 | P67S | Cct | Tct | 14 | 14 | B.1.396 | 0.00988 |
N | 67 | P67S | Cct | Tct | 14 | 14 | B.1.427 | 0.000707 |
N | 67 | P67H | cCt | cAt | 13 | 13 | AY.6 | 0.000535 |
N | 67 | P67P | ccT | ccC | 13 | 13 | B.1.1.306 | 0.005699 |
N | 67 | P67L | cCt | cTt | 13 | 13 | B.1.36.22 | 0.0157 |
N | 67 | P67S | Cct | Tct | 13 | 13 | B.1.564 | 0.005537 |
N | 67 | P67L | cCt | cTt | 12 | 12 | AY.100 | 0.000552 |
N | 67 | P67P | ccT | ccC | 12 | 12 | B.1.1.28 | 0.003735 |
N | 67 | P67S | Cct | Tct | 12 | 12 | B.1.311 | 0.003295 |
N | 67 | P67S | Cct | Tct | 12 | 12 | B.1.577 | 0.008247 |
N | 67 | P67P | ccT | ccG | 5 | 11 | AY.103 | 0.000031 |
N | 67 | P67P | ccT | ccC | 5 | 11 | AY.103 | 0.000031 |
N | 67 | P67P | ccT | ccA | 1 | 11 | AY.103 | 0.000006 |
N | 67 | P67H | cCt | cAt | 11 | 11 | AY.44 | 0.000067 |
N | 67 | P67L | cCt | cTt | 11 | 11 | AY.46.5 | 0.002183 |
N | 67 | P67L | cCt | cTt | 11 | 11 | B.1.1.176 | 0.004833 |
N | 67 | P67L | cCt | cTt | 11 | 11 | B.1.1.214 | 0.00061 |
N | 67 | P67L | cCt | cTt | 11 | 11 | B.1.36.38 | 0.018062 |
N | 67 | P67S | Cct | Tct | 11 | 11 | B.1.576 | 0.009973 |
N | 67 | P67S | Cct | Tct | 11 | 11 | B.1.582 | 0.005397 |
N | 67 | P67L | cCt | cTt | 10 | 10 | AY.26 | 0.000283 |
N | 67 | P67P | ccT | ccA | 10 | 10 | AY.4.2 | 0.000217 |
N | 67 | P67S | Cct | Tct | 10 | 10 | AY.69 | 0.001867 |
N | 67 | P67S | Cct | Tct | 10 | 10 | B | 0.001278 |
N | 67 | P67S | Cct | Tct | 10 | 10 | B.1.349 | 0.007148 |
N | 67 | P67L | cCt | cTt | 10 | 10 | B.1.427 | 0.000505 |
N | 67 | P67S | Cct | Tct | 10 | 10 | Q.8 | 0.001649 |
N | 67 | P67P | ccT | ccC | 9 | 9 | AY.1 | 0.003562 |
N | 67 | P67H | cCt | cAt | 9 | 9 | AY.102 | 0.000239 |
N | 67 | P67H | cCt | cAt | 9 | 9 | AY.25 | 0.000054 |
N | 67 | P67S | Cct | Tct | 9 | 9 | AY.39 | 0.000222 |
N | 67 | P67T | Cct | Act | 9 | 9 | AY.4 | 0.000014 |
N | 67 | P67P | ccT | ccA | 9 | 9 | AY.42 | 0.000362 |
N | 67 | P67H | cCt | cAt | 9 | 9 | AY.43 | 0.00004 |
N | 67 | P67P | ccT | ccC | 9 | 9 | AY.45 | 0.001095 |
N | 67 | P67R | cCt | cGt | 8 | 9 | B.1 | 0.000073 |
N | 67 | P67P | ccT | ccG | 4 | 9 | B.1 | 0.000037 |
N | 67 | P67P | ccT | ccC | 4 | 9 | B.1 | 0.000037 |
N | 67 | P67P | ccT | ccA | 1 | 9 | B.1 | 0.000009 |
N | 67 | P67R | cCT | cGA | 1 | 9 | B.1 | 0.000009 |
N | 67 | P67S | Cct | Tct | 9 | 9 | B.1.1.507 | 0.078261 |
N | 67 | P67P | ccT | ccC | 5 | 9 | B.1.351 | 0.000149 |
N | 67 | P67P | ccT | ccA | 4 | 9 | B.1.351 | 0.000119 |
N | 67 | P67S | Cct | Tct | 9 | 9 | B.1.375 | 0.007377 |
N | 67 | P67L | cCt | cTt | 9 | 9 | P.1.14 | 0.00043 |
N | 67 | P67L | cCt | cTt | 9 | 9 | Q.8 | 0.001484 |
N | 67 | P67Y | CCt | TAt | 8 | 8 | All | 0.000002 |
N | 67 | P67S | Cct | Tct | 8 | 8 | AY.102 | 0.000212 |
N | 67 | P67L | cCt | cTt | 8 | 8 | AY.98.1 | 0.000387 |
N | 67 | P67S | Cct | Tct | 8 | 8 | B.1.1.464 | 0.011782 |
N | 67 | P67P | ccT | ccG | 6 | 8 | B.1.1.519 | 0.000238 |
N | 67 | P67P | ccT | ccC | 2 | 8 | B.1.1.519 | 0.000079 |
N | 67 | P67P | ccT | ccC | 6 | 8 | B.1.177 | 0.000079 |
N | 67 | P67P | ccT | ccA | 2 | 8 | B.1.177 | 0.000026 |
N | 67 | P67L | cCt | cTt | 8 | 8 | B.1.177.60 | 0.001747 |
N | 67 | P67S | Cct | Tct | 8 | 8 | B.1.240 | 0.001725 |
N | 67 | P67S | Cct | Tct | 8 | 8 | B.1.590 | 0.036364 |
N | 67 | P67L | cCt | cTt | 7 | 7 | AY.119 | 0.000247 |
N | 67 | P67P | ccT | ccC | 4 | 7 | AY.119 | 0.000141 |
N | 67 | P67P | ccT | ccA | 3 | 7 | AY.119 | 0.000106 |
N | 67 | P67L | cCt | cTt | 7 | 7 | AY.20 | 0.000272 |
N | 67 | P67P | ccT | ccC | 7 | 7 | AY.34 | 0.000679 |
N | 67 | P67L | cCt | cTt | 7 | 7 | AY.4.2.1 | 0.001043 |
N | 67 | P67P | ccT | ccC | 7 | 7 | AY.43 | 0.000031 |
N | 67 | P67L | cCt | cTt | 7 | 7 | AY.47 | 0.000218 |
N | 67 | P67H | cCt | cAt | 7 | 7 | B.1.160 | 0.000218 |
N | 67 | P67S | Cct | Tct | 7 | 7 | B.1.284 | 0.092105 |
N | 67 | P67P | ccT | ccC | 7 | 7 | B.1.36.26 | 0.02 |
N | 67 | P67P | ccT | ccG | 7 | 7 | B.1.396 | 0.00494 |
N | 67 | P67L | cCt | cTt | 7 | 7 | B.1.429 | 0.000165 |
N | 67 | P67S | Cct | Tct | 7 | 7 | B.1.567 | 0.023333 |
N | 67 | P67S | Cct | Tct | 7 | 7 | B.1.612 | 0.018568 |
N | 67 | P67S | Cct | Tct | 6 | 6 | AY.100 | 0.000276 |
N | 67 | P67T | Cct | Act | 6 | 6 | AY.103 | 0.000037 |
N | 67 | P67A | Cct | Gct | 6 | 6 | AY.103 | 0.000037 |
N | 67 | P67H | cCt | cAt | 6 | 6 | AY.39 | 0.000148 |
N | 67 | P67S | Cct | Tct | 6 | 6 | AY.4.2 | 0.00013 |
N | 67 | P67T | Cct | Act | 6 | 6 | AY.44 | 0.000037 |
N | 67 | P67P | ccT | ccA | 5 | 6 | AY.54 | 0.000477 |
N | 67 | P67P | ccT | ccG | 1 | 6 | AY.54 | 0.000095 |
N | 67 | P67T | Cct | Act | 6 | 6 | AY.86 | 0.004979 |
N | 67 | P67S | Cct | Tct | 6 | 6 | AY.98 | 0.000474 |
N | 67 | P67P | ccT | ccA | 6 | 6 | B.1.1.27 | 0.033898 |
N | 67 | P67L | cCt | cTt | 6 | 6 | B.1.1.351 | 0.01676 |
N | 67 | P67P | ccT | ccA | 3 | 6 | B.1.160 | 0.000094 |
N | 67 | P67P | ccT | ccC | 3 | 6 | B.1.160 | 0.000094 |
N | 67 | P67L | cCt | cTt | 6 | 6 | B.1.177.57 | 0.001686 |
N | 67 | P67S | Cct | Tct | 6 | 6 | B.1.177.62 | 0.007151 |
N | 67 | P67S | Cct | Tct | 6 | 6 | B.1.367 | 0.004754 |
N | 67 | P67S | Cct | Tct | 6 | 6 | B.1.438.1 | 0.000644 |
N | 67 | P67H | cCt | cAt | 6 | 6 | B.1.526 | 0.000141 |
N | 67 | P67S | Cct | Tct | 6 | 6 | B.1.526 | 0.000141 |
N | 67 | P67S | Cct | Tct | 6 | 6 | B.1.565 | 0.004862 |
N | 67 | P67L | cCt | cTt | 6 | 6 | B.1.568 | 0.006667 |
N | 67 | P67S | Cct | Tct | 6 | 6 | B.1.606 | 0.036145 |
N | 67 | P67L | cCt | cTt | 6 | 6 | C.37 | 0.000696 |
N | 67 | P67L | cCt | cTt | 6 | 6 | P.1.13 | 0.005391 |
N | 67 | P67S | Cct | Tct | 5 | 5 | 0.277778 | |
N | 67 | P67S | Cct | Tct | 4 | 5 | AY.106 | 0.00134 |
N | 67 | P67S | CcT | TcC | 1 | 5 | AY.106 | 0.000335 |
N | 67 | P67S | Cct | Tct | 5 | 5 | AY.13 | 0.000805 |
N | 67 | P67L | cCt | cTt | 5 | 5 | AY.29 | 0.000079 |
N | 67 | P67L | cCt | cTt | 5 | 5 | AY.39 | 0.000124 |
N | 67 | P67S | Cct | Tct | 5 | 5 | AY.42 | 0.000201 |
N | 67 | P67L | cCt | cTt | 5 | 5 | AY.45 | 0.000608 |
N | 67 | P67S | Cct | Tct | 5 | 5 | AY.46.6 | 0.000361 |
N | 67 | P67S | Cct | Tct | 5 | 5 | AY.5 | 0.000103 |
N | 67 | P67S | Cct | Tct | 5 | 5 | AY.6 | 0.000206 |
N | 67 | P67S | Cct | Tct | 5 | 5 | AY.99.2 | 0.000461 |
N | 67 | P67H | cCt | cAt | 5 | 5 | B.1 | 0.000046 |
N | 67 | P67S | Cct | Tct | 5 | 5 | B.1.1.222 | 0.00102 |
N | 67 | P67S | Cct | Tct | 5 | 5 | B.1.139 | 0.003666 |
N | 67 | P67S | Cct | Tct | 5 | 5 | B.1.157 | 0.014925 |
N | 67 | P67P | ccT | ccC | 5 | 5 | B.1.177.21 | 0.000382 |
N | 67 | P67L | cCt | cTt | 5 | 5 | B.1.234 | 0.00066 |
N | 67 | P67P | ccT | ccC | 5 | 5 | B.1.234 | 0.00066 |
N | 67 | P67S | Cct | Tct | 5 | 5 | B.1.351 | 0.000149 |
N | 67 | P67L | cCt | cTt | 5 | 5 | B.1.36 | 0.00073 |
N | 67 | P67S | Cct | Tct | 5 | 5 | B.1.589 | 0.037879 |
N | 67 | P67P | ccT | ccC | 2 | 5 | B.1.621 | 0.000177 |
N | 67 | P67P | ccT | ccG | 2 | 5 | B.1.621 | 0.000177 |
N | 67 | P67P | ccT | ccA | 1 | 5 | B.1.621 | 0.000089 |
N | 67 | P67S | Cct | Tct | 5 | 5 | B.1.78 | 0.042735 |
N | 67 | P67S | Cct | Tct | 4 | 4 | AT.1 | 0.020513 |
N | 67 | P67P | ccT | ccC | 2 | 4 | AY.102 | 0.000053 |
N | 67 | P67P | ccT | ccA | 2 | 4 | AY.102 | 0.000053 |
N | 67 | P67S | Cct | Tct | 4 | 4 | AY.121 | 0.000541 |
N | 67 | P67S | Cct | Tct | 4 | 4 | AY.20 | 0.000155 |
N | 67 | P67S | Cct | Tct | 4 | 4 | AY.29.1 | 0.000882 |
N | 67 | P67P | ccT | ccA | 3 | 4 | AY.3.1 | 0.000256 |
N | 67 | P67P | ccT | ccC | 1 | 4 | AY.3.1 | 0.000085 |
N | 67 | P67H | cCt | cAt | 4 | 4 | AY.33 | 0.000267 |
N | 67 | P67R | cCt | cGt | 4 | 4 | AY.4 | 0.000006 |
N | 67 | P67S | Cct | Tct | 4 | 4 | AY.54 | 0.000381 |
N | 67 | P67S | Cct | Tct | 4 | 4 | AY.9.2 | 0.000147 |
N | 67 | P67S | Cct | Tct | 4 | 4 | AY.98.1 | 0.000194 |
N | 67 | P67S | Cct | Tct | 4 | 4 | B.1.1.1 | 0.001307 |
N | 67 | P67L | cCt | cTt | 4 | 4 | B.1.1.170 | 0.004988 |
N | 67 | P67P | ccT | ccG | 4 | 4 | B.1.1.322 | 0.035088 |
N | 67 | P67S | Cct | Tct | 4 | 4 | B.1.1.402 | 0.044444 |
N | 67 | P67P | ccT | ccC | 4 | 4 | B.1.1.420 | 0.004024 |
N | 67 | P67P | ccT | ccC | 3 | 4 | B.1.1.63 | 0.001157 |
N | 67 | P67P | ccT | ccG | 1 | 4 | B.1.1.63 | 0.000386 |
N | 67 | P67R | cCt | cGt | 4 | 4 | B.1.1.7 | 0.000004 |
N | 67 | P67S | Cct | Tct | 4 | 4 | B.1.126 | 0.005102 |
N | 67 | P67S | Cct | Tct | 4 | 4 | B.1.160 | 0.000125 |
N | 67 | P67Y | CCt | TAt | 4 | 4 | B.1.2 | 0.000035 |
N | 67 | P67S | Cct | Tct | 4 | 4 | B.1.210 | 0.008529 |
N | 67 | P67H | cCt | cAt | 4 | 4 | B.1.214.2 | 0.002398 |
N | 67 | P67S | Cct | Tct | 4 | 4 | B.1.264 | 0.049383 |
N | 67 | P67S | Cct | Tct | 4 | 4 | B.1.298 | 0.008457 |
N | 67 | P67S | Cct | Tct | 4 | 4 | B.1.324 | 0.006421 |
N | 67 | P67S | Cct | Tct | 4 | 4 | B.1.336 | 0.009756 |
N | 67 | P67P | ccT | ccC | 4 | 4 | B.1.438.1 | 0.000429 |
N | 67 | P67Y | CCt | TAt | 4 | 4 | B.1.596 | 0.000349 |
N | 67 | P67S | Cct | Tct | 4 | 4 | B.1.609 | 0.001918 |
N | 67 | P67H | cCt | cAt | 4 | 4 | B.1.617.1 | 0.000516 |
N | 67 | P67S | Cct | Tct | 4 | 4 | D.2 | 0.0003 |
N | 67 | P67S | Cct | Tct | 4 | 4 | R.1 | 0.00036 |
N | 67 | P67S | Cct | Tct | 3 | 3 | A | 0.001161 |
N | 67 | P67V | CCt | GTt | 2 | 3 | All | 0 |
N | 67 | P67V | CCT | GTA | 1 | 3 | All | 0 |
N | 67 | P67H | cCt | cAt | 3 | 3 | AY.103 | 0.000019 |
N | 67 | P67T | Cct | Act | 3 | 3 | AY.114 | 0.000693 |
N | 67 | P67R | cCt | cGt | 3 | 3 | AY.116.1 | 0.000934 |
N | 67 | P67T | Cct | Act | 3 | 3 | AY.25 | 0.000018 |
N | 67 | P67S | Cct | Tct | 3 | 3 | AY.33 | 0.0002 |
N | 67 | P67T | Cct | Act | 3 | 3 | AY.33 | 0.0002 |
N | 67 | P67A | Cct | Gct | 3 | 3 | AY.44 | 0.000018 |
N | 67 | P67P | ccT | ccC | 3 | 3 | AY.6 | 0.000123 |
N | 67 | P67L | cCt | cTt | 3 | 3 | AY.62 | 0.001307 |
N | 67 | P67S | Cct | Tct | 3 | 3 | AY.75 | 0.000168 |
N | 67 | P67S | Cct | Tct | 3 | 3 | AY.75.1 | 0.000541 |
N | 67 | P67S | Cct | Tct | 3 | 3 | AY.9.1 | 0.000251 |
N | 67 | P67L | cCt | cTt | 3 | 3 | AY.95 | 0.002283 |
N | 67 | P67T | Cct | Act | 3 | 3 | B.1.1.10 | 0.003344 |
N | 67 | P67S | Cct | Tct | 3 | 3 | B.1.1.294 | 0.003797 |
N | 67 | P67H | cCt | cAt | 3 | 3 | B.1.1.434 | 0.001046 |
N | 67 | P67H | cCt | cAt | 3 | 3 | B.1.177.68 | 0.045455 |
N | 67 | P67S | Cct | Tct | 3 | 3 | B.1.177.81 | 0.000568 |
N | 67 | P67L | cCt | cTt | 3 | 3 | B.1.177.86 | 0.00055 |
N | 67 | P67S | Cct | Tct | 3 | 3 | B.1.330 | 0.085714 |
N | 67 | P67S | Cct | Tct | 3 | 3 | B.1.337 | 0.01676 |
N | 67 | P67S | Cct | Tct | 3 | 3 | B.1.36.16 | 0.004274 |
N | 67 | P67S | Cct | Tct | 3 | 3 | B.1.36.22 | 0.003623 |
N | 67 | P67R | cCt | cGt | 3 | 3 | B.1.404 | 0.003906 |
N | 67 | P67L | cCt | cTt | 3 | 3 | B.1.408 | 0.01107 |
N | 67 | P67P | ccT | ccC | 3 | 3 | B.1.429 | 0.000071 |
N | 67 | P67L | cCt | cTt | 3 | 3 | B.1.438.1 | 0.000322 |
N | 67 | P67S | Cct | Tct | 3 | 3 | B.1.466.2 | 0.001174 |
N | 67 | P67A | Cct | Gct | 2 | 3 | B.1.617.2 | 0.000008 |
N | 67 | P67A | CcT | GcA | 1 | 3 | B.1.617.2 | 0.000004 |
N | 67 | P67S | Cct | Tct | 3 | 3 | C.32 | 0.069767 |
N | 67 | P67A | Cct | Gct | 2 | 3 | P.1 | 0.000032 |
N | 67 | P67A | CcT | GcG | 1 | 3 | P.1 | 0.000016 |
N | 67 | P67P | ccT | ccC | 2 | 3 | P.1.15 | 0.000465 |
N | 67 | P67P | ccT | ccA | 1 | 3 | P.1.15 | 0.000232 |
N | 67 | P67L | cCt | cTt | 3 | 3 | R.1 | 0.00027 |
N | 67 | P67L | cCT | cTG | 2 | 2 | 0.111111 | |
N | 67 | P67A | Cct | Gct | 2 | 2 | 0.111111 | |
N | 67 | P67L | cCt | cTt | 2 | 2 | A.23.1 | 0.001408 |
N | 67 | P67S | Cct | Tct | 2 | 2 | AD.2 | 0.000438 |
N | 67 | P67C | CCt | TGt | 2 | 2 | All | 0 |
N | 67 | P67D | CCt | GAt | 2 | 2 | All | 0 |
N | 67 | P67P | ccT | ccC | 2 | 2 | AY.100 | 0.000092 |
N | 67 | P67H | cCt | cAt | 2 | 2 | AY.106 | 0.00067 |
N | 67 | P67T | Cct | Act | 2 | 2 | AY.108 | 0.002205 |
N | 67 | P67H | cCt | cAt | 2 | 2 | AY.113 | 0.000285 |
N | 67 | P67S | Cct | Tct | 2 | 2 | AY.119 | 0.000071 |
N | 67 | P67L | cCt | cTt | 2 | 2 | AY.12 | 0.000632 |
N | 67 | P67L | cCt | cTt | 2 | 2 | AY.120.1 | 0.000642 |
N | 67 | P67L | cCt | cTt | 2 | 2 | AY.121 | 0.000271 |
N | 67 | P67L | cCt | cTt | 2 | 2 | AY.23 | 0.000139 |
N | 67 | P67P | ccT | ccC | 2 | 2 | AY.29 | 0.000032 |
N | 67 | P67H | cCt | cAt | 2 | 2 | AY.3 | 0.00002 |
N | 67 | P67P | ccT | ccC | 2 | 2 | AY.33 | 0.000134 |
N | 67 | P67P | ccT | ccC | 2 | 2 | AY.35 | 0.000466 |
N | 67 | P67P | ccT | ccC | 2 | 2 | AY.39.1 | 0.000079 |
N | 67 | P67L | cCt | cTt | 2 | 2 | AY.4.2 | 0.000043 |
N | 67 | P67L | cCt | cTt | 2 | 2 | AY.4.4 | 0.000818 |
N | 67 | P67del | CCT | --- | 2 | 2 | AY.43 | 0.000009 |
N | 67 | P67A | Cct | Gct | 2 | 2 | AY.43 | 0.000009 |
N | 67 | P67T | Cct | Act | 2 | 2 | AY.43 | 0.000009 |
N | 67 | P67H | cCt | cAt | 2 | 2 | AY.45 | 0.000243 |
N | 67 | P67A | Cct | Gct | 2 | 2 | AY.45 | 0.000243 |
N | 67 | P67S | Cct | Tct | 2 | 2 | AY.46.1 | 0.002053 |
N | 67 | P67S | Cct | Tct | 2 | 2 | AY.46.4 | 0.000329 |
N | 67 | P67S | Cct | Tct | 2 | 2 | AY.47 | 0.000062 |
N | 67 | P67S | Cct | Tct | 2 | 2 | AY.49 | 0.00639 |
N | 67 | P67L | cCt | cTt | 2 | 2 | AY.54 | 0.000191 |
N | 67 | P67L | cCt | cTt | 2 | 2 | AY.55 | 0.001835 |
N | 67 | P67S | Cct | Tct | 2 | 2 | AY.62 | 0.000871 |
N | 67 | P67L | cCt | cTt | 2 | 2 | AY.69 | 0.000373 |
N | 67 | P67S | Cct | Tct | 2 | 2 | AY.7.1 | 0.000225 |
N | 67 | P67H | cCt | cAt | 2 | 2 | AY.7.1 | 0.000225 |
N | 67 | P67P | ccT | ccA | 2 | 2 | AY.74 | 0.000231 |
N | 67 | P67P | ccT | ccC | 2 | 2 | AY.82 | 0.002714 |
N | 67 | P67S | Cct | Tct | 2 | 2 | AY.9 | 0.000135 |
N | 67 | P67P | ccT | ccA | 2 | 2 | AY.9.2 | 0.000073 |
N | 67 | P67P | ccT | ccA | 1 | 2 | AY.93 | 0.000273 |
N | 67 | P67P | ccT | ccC | 1 | 2 | AY.93 | 0.000273 |
N | 67 | P67P | ccT | ccG | 2 | 2 | AZ.2 | 0.001642 |
N | 67 | P67L | cCt | cTt | 2 | 2 | B | 0.000256 |
N | 67 | P67P | ccT | ccC | 2 | 2 | B.1.1 | 0.000036 |
N | 67 | P67S | Cct | Tct | 2 | 2 | B.1.1.169 | 0.036364 |
N | 67 | P67L | cCt | cTt | 2 | 2 | B.1.1.216 | 0.001781 |
N | 67 | P67S | Cct | Tct | 2 | 2 | B.1.1.216 | 0.001781 |
N | 67 | P67L | cCt | cTt | 2 | 2 | B.1.1.25 | 0.001137 |
N | 67 | P67L | cCt | cTt | 2 | 2 | B.1.1.28 | 0.000622 |
N | 67 | P67S | Cct | Tct | 2 | 2 | B.1.1.301 | 0.002358 |
N | 67 | P67S | Cct | Tct | 2 | 2 | B.1.1.33 | 0.000842 |
N | 67 | P67T | Cct | Act | 2 | 2 | B.1.1.348 | 0.001592 |
N | 67 | P67S | Cct | Tct | 2 | 2 | B.1.1.432 | 0.002532 |
N | 67 | P67S | Cct | Tct | 2 | 2 | B.1.1.434 | 0.000697 |
N | 67 | P67S | Cct | Tct | 2 | 2 | B.1.1.441 | 0.1 |
N | 67 | P67A | Cct | Gct | 2 | 2 | B.1.1.50 | 0.001358 |
N | 67 | P67T | Cct | Act | 2 | 2 | B.1.1.519 | 0.000079 |
N | 67 | P67S | Cct | Tct | 2 | 2 | B.1.1.526 | 0.007092 |
N | 67 | P67A | Cct | Gct | 2 | 2 | B.1.1.7 | 0.000002 |
N | 67 | P67del | CCT | --- | 2 | 2 | B.1.1.7 | 0.000002 |
N | 67 | P67P | ccT | ccC | 2 | 2 | B.1.14 | 0.035088 |
N | 67 | P67R | cCT | cGA | 1 | 2 | B.1.157 | 0.002985 |
N | 67 | P67R | cCt | cGt | 1 | 2 | B.1.157 | 0.002985 |
N | 67 | P67L | cCt | cTt | 2 | 2 | B.1.177.44 | 0.001038 |
N | 67 | P67L | cCt | cTt | 2 | 2 | B.1.177.50 | 0.00939 |
N | 67 | P67L | cCt | cTt | 2 | 2 | B.1.177.82 | 0.000955 |
N | 67 | P67L | cCt | cTt | 2 | 2 | B.1.189 | 0.008584 |
N | 67 | P67S | Cct | Tct | 2 | 2 | B.1.211 | 0.05 |
N | 67 | P67S | Cct | Tct | 2 | 2 | B.1.214 | 0.007326 |
N | 67 | P67S | Cct | Tct | 2 | 2 | B.1.232 | 0.001075 |
N | 67 | P67L | cCt | cTt | 2 | 2 | B.1.258 | 0.000133 |
N | 67 | P67S | Cct | Tct | 2 | 2 | B.1.258.17 | 0.000208 |
N | 67 | P67S | Cct | Tct | 2 | 2 | B.1.265 | 0.002541 |
N | 67 | P67S | Cct | Tct | 2 | 2 | B.1.325 | 0.013793 |
N | 67 | P67P | ccT | ccC | 1 | 2 | B.1.36 | 0.000146 |
N | 67 | P67P | ccT | ccA | 1 | 2 | B.1.36 | 0.000146 |
N | 67 | P67S | Cct | Tct | 2 | 2 | B.1.36.29 | 0.001035 |
N | 67 | P67P | ccT | ccC | 2 | 2 | B.1.36.8 | 0.002 |
N | 67 | P67S | Cct | Tct | 2 | 2 | B.1.382 | 0.017857 |
N | 67 | P67S | Cct | Tct | 2 | 2 | B.1.395 | 0.014085 |
N | 67 | P67S | Cct | Tct | 2 | 2 | B.1.416.1 | 0.003125 |
N | 67 | P67L | cCt | cTt | 2 | 2 | B.1.422 | 0.001625 |
N | 67 | P67S | Cct | Tct | 2 | 2 | B.1.517 | 0.000854 |
N | 67 | P67S | Cct | Tct | 2 | 2 | B.1.521 | 0.00995 |
N | 67 | P67P | ccT | ccC | 2 | 2 | B.1.525 | 0.000226 |
N | 67 | P67P | ccT | ccC | 2 | 2 | B.1.526 | 0.000047 |
N | 67 | P67S | Cct | Tct | 2 | 2 | B.1.550 | 0.027397 |
N | 67 | P67L | cCt | cTt | 2 | 2 | B.1.551 | 0.002581 |
N | 67 | P67S | Cct | Tct | 2 | 2 | B.1.566 | 0.038462 |
N | 67 | P67S | Cct | Tct | 2 | 2 | B.1.575 | 0.000607 |
N | 67 | P67S | Cct | Tct | 2 | 2 | B.1.581 | 0.018868 |
N | 67 | P67T | Cct | Act | 2 | 2 | B.1.588 | 0.00182 |
N | 67 | P67S | Cct | Tct | 2 | 2 | B.1.588 | 0.00182 |
N | 67 | P67S | Cct | Tct | 2 | 2 | B.1.617.1 | 0.000258 |
N | 67 | P67R | cCt | cGt | 2 | 2 | B.1.618 | 0.008065 |
N | 67 | P67S | Cct | Tct | 2 | 2 | B.1.623 | 0.001073 |
N | 67 | P67L | cCt | cTt | 2 | 2 | B.1.625 | 0.004706 |
N | 67 | P67S | Cct | Tct | 2 | 2 | B.1.637 | 0.000146 |
N | 67 | P67S | Cct | Tct | 2 | 2 | B.1.88.1 | 0.009615 |
N | 67 | P67S | Cct | Tct | 2 | 2 | C.16 | 0.002121 |
N | 67 | P67L | cCt | cTt | 2 | 2 | C.36 | 0.001821 |
N | 67 | P67S | Cct | Tct | 2 | 2 | C.37 | 0.000232 |
N | 67 | P67S | Cct | Tct | 2 | 2 | P.1.12 | 0.000968 |
N | 67 | P67S | Cct | Tct | 2 | 2 | P.1.15 | 0.000465 |
N | 67 | P67T | Cct | Act | 2 | 2 | P.1.9 | 0.009615 |
N | 67 | P67P | ccT | ccG | 1 | 2 | P.2 | 0.000187 |
N | 67 | P67A | CcT | GcG | 1 | 2 | P.2 | 0.000187 |
N | 67 | P67P | ccT | ccC | 1 | 2 | P.2 | 0.000187 |
N | 67 | P67A | Cct | Gct | 1 | 2 | P.2 | 0.000187 |
N | 67 | P67H | cCt | cAt | 1 | 1 | A | 0.000387 |
N | 67 | P67H | cCt | cAt | 1 | 1 | A.15 | 0.015873 |
N | 67 | P67S | Cct | Tct | 1 | 1 | A.2.2 | 0.001689 |
N | 67 | P67S | Cct | Tct | 1 | 1 | A.2.5 | 0.000499 |
N | 67 | P67L | cCt | cTt | 1 | 1 | A.2.5 | 0.000499 |
N | 67 | P67P | ccT | ccC | 1 | 1 | A.2.5 | 0.000499 |
N | 67 | P67S | Cct | Tct | 1 | 1 | A.2.5.2 | 0.001572 |
N | 67 | P67S | Cct | Tct | 1 | 1 | A.23.1 | 0.000704 |
N | 67 | P67L | cCt | cTt | 1 | 1 | A.25 | 0.018182 |
N | 67 | P67S | Cct | Tct | 1 | 1 | AA.1 | 0.007246 |
N | 67 | P67Q | cCT | cAA | 1 | 1 | All | 0 |
N | 67 | P67E | CCT | GAA | 1 | 1 | All | 0 |
N | 67 | P67G | CCT | GGA | 1 | 1 | All | 0 |
N | 67 | P67S | Cct | Tct | 1 | 1 | AY.101 | 0.00049 |
N | 67 | P67A | Cct | Gct | 1 | 1 | AY.102 | 0.000027 |
N | 67 | P67T | Cct | Act | 1 | 1 | AY.102 | 0.000027 |
N | 67 | P67L | cCt | cTt | 1 | 1 | AY.106 | 0.000335 |
N | 67 | P67P | ccT | ccC | 1 | 1 | AY.109 | 0.00074 |
N | 67 | P67S | Cct | Tct | 1 | 1 | AY.109 | 0.00074 |
N | 67 | P67P | ccT | ccC | 1 | 1 | AY.111 | 0.000183 |
N | 67 | P67L | cCt | cTt | 1 | 1 | AY.113 | 0.000142 |
N | 67 | P67S | Cct | Tct | 1 | 1 | AY.113 | 0.000142 |
N | 67 | P67P | ccT | ccC | 1 | 1 | AY.114 | 0.000231 |
N | 67 | P67S | Cct | Tct | 1 | 1 | AY.114 | 0.000231 |
N | 67 | P67H | cCt | cAt | 1 | 1 | AY.116 | 0.000287 |
N | 67 | P67S | Cct | Tct | 1 | 1 | AY.116 | 0.000287 |
N | 67 | P67L | cCt | cTt | 1 | 1 | AY.116.1 | 0.000311 |
N | 67 | P67P | ccT | ccC | 1 | 1 | AY.117 | 0.000085 |
N | 67 | P67L | cCt | cTt | 1 | 1 | AY.117 | 0.000085 |
N | 67 | P67L | cCt | cTt | 1 | 1 | AY.118 | 0.000063 |
N | 67 | P67H | cCt | cAt | 1 | 1 | AY.120 | 0.000037 |
N | 67 | P67S | Cct | Tct | 1 | 1 | AY.120 | 0.000037 |
N | 67 | P67P | ccT | ccA | 1 | 1 | AY.120 | 0.000037 |
N | 67 | P67L | cCt | cTt | 1 | 1 | AY.16 | 0.00038 |
N | 67 | P67S | Cct | Tct | 1 | 1 | AY.16.1 | 0.00047 |
N | 67 | P67del | CCT | --- | 1 | 1 | AY.18 | 0.010101 |
N | 67 | P67V | CCt | GTt | 1 | 1 | AY.18 | 0.010101 |
N | 67 | P67S | Cct | Tct | 1 | 1 | AY.19 | 0.00114 |
N | 67 | P67T | Cct | Act | 1 | 1 | AY.20 | 0.000039 |
N | 67 | P67A | Cct | Gct | 1 | 1 | AY.20 | 0.000039 |
N | 67 | P67H | cCt | cAt | 1 | 1 | AY.20 | 0.000039 |
N | 67 | P67P | ccT | ccC | 1 | 1 | AY.23 | 0.00007 |
N | 67 | P67S | Cct | Tct | 1 | 1 | AY.23 | 0.00007 |
N | 67 | P67L | cCt | cTt | 1 | 1 | AY.23.1 | 0.000417 |
N | 67 | P67P | ccT | ccC | 1 | 1 | AY.24 | 0.000431 |
N | 67 | P67P | ccT | ccC | 1 | 1 | AY.26 | 0.000028 |
N | 67 | P67S | Cct | Tct | 1 | 1 | AY.27 | 0.000065 |
N | 67 | P67H | cCt | cAt | 1 | 1 | AY.29 | 0.000016 |
N | 67 | P67L | cCt | cTt | 1 | 1 | AY.3.1 | 0.000085 |
N | 67 | P67S | Cct | Tct | 1 | 1 | AY.32 | 0.000532 |
N | 67 | P67S | Cct | Tct | 1 | 1 | AY.34 | 0.000097 |
N | 67 | P67H | cCt | cAt | 1 | 1 | AY.34 | 0.000097 |
N | 67 | P67T | Cct | Act | 1 | 1 | AY.36 | 0.000148 |
N | 67 | P67P | ccT | ccA | 1 | 1 | AY.36 | 0.000148 |
N | 67 | P67P | ccT | ccG | 1 | 1 | AY.38 | 0.000499 |
N | 67 | P67L | cCt | cTt | 1 | 1 | AY.38 | 0.000499 |
N | 67 | P67P | ccT | ccC | 1 | 1 | AY.39 | 0.000025 |
N | 67 | P67S | Cct | Tct | 1 | 1 | AY.39.1 | 0.00004 |
N | 67 | P67del | CCT | --- | 1 | 1 | AY.4 | 0.000002 |
N | 67 | P67S | Cct | Tct | 1 | 1 | AY.4.3 | 0.000842 |
N | 67 | P67L | cCt | cTt | 1 | 1 | AY.4.5 | 0.000107 |
N | 67 | P67L | cCt | cTt | 1 | 1 | AY.42 | 0.00004 |
N | 67 | P67R | cCT | cGC | 1 | 1 | AY.44 | 0.000006 |
N | 67 | P67L | cCt | cTt | 1 | 1 | AY.46 | 0.000104 |
N | 67 | P67T | Cct | Act | 1 | 1 | AY.46 | 0.000104 |
N | 67 | P67R | cCt | cGt | 1 | 1 | AY.46 | 0.000104 |
N | 67 | P67H | cCt | cAt | 1 | 1 | AY.46 | 0.000104 |
N | 67 | P67P | ccT | ccA | 1 | 1 | AY.5 | 0.000021 |
N | 67 | P67H | cCt | cAt | 1 | 1 | AY.5 | 0.000021 |
N | 67 | P67T | Cct | Act | 1 | 1 | AY.54 | 0.000095 |
N | 67 | P67S | Cct | Tct | 1 | 1 | AY.55 | 0.000917 |
N | 67 | P67S | Cct | Tct | 1 | 1 | AY.59 | 0.00053 |
N | 67 | P67P | ccT | ccC | 1 | 1 | AY.59 | 0.00053 |
N | 67 | P67S | Cct | Tct | 1 | 1 | AY.60 | 0.000938 |
N | 67 | P67P | ccT | ccC | 1 | 1 | AY.61 | 0.000105 |
N | 67 | P67L | cCt | cTt | 1 | 1 | AY.61 | 0.000105 |
N | 67 | P67S | Cct | Tct | 1 | 1 | AY.61 | 0.000105 |
N | 67 | P67S | Cct | Tct | 1 | 1 | AY.63 | 0.000387 |
N | 67 | P67A | Cct | Gct | 1 | 1 | AY.64 | 0.000595 |
N | 67 | P67L | cCt | cTt | 1 | 1 | AY.67 | 0.000464 |
N | 67 | P67del | CCT | --- | 1 | 1 | AY.67 | 0.000464 |
N | 67 | P67S | Cct | Tct | 1 | 1 | AY.68 | 0.000274 |
N | 67 | P67L | cCt | cTt | 1 | 1 | AY.68 | 0.000274 |
N | 67 | P67L | cCt | cTt | 1 | 1 | AY.7 | 0.000196 |
N | 67 | P67L | cCt | cTt | 1 | 1 | AY.7.1 | 0.000113 |
N | 67 | P67S | Cct | Tct | 1 | 1 | AY.71 | 0.000475 |
N | 67 | P67S | Cct | Tct | 1 | 1 | AY.74 | 0.000116 |
N | 67 | P67P | ccT | ccC | 1 | 1 | AY.75.1 | 0.00018 |
N | 67 | P67L | cCt | cTt | 1 | 1 | AY.75.1 | 0.00018 |
N | 67 | P67L | cCt | cTt | 1 | 1 | AY.79 | 0.001211 |
N | 67 | P67S | Cct | Tct | 1 | 1 | AY.79 | 0.001211 |
N | 67 | P67L | cCt | cTt | 1 | 1 | AY.8 | 0.000606 |
N | 67 | P67S | Cct | Tct | 1 | 1 | AY.83 | 0.001724 |
N | 67 | P67P | ccT | ccC | 1 | 1 | AY.84 | 0.000437 |
N | 67 | P67L | cCt | cTt | 1 | 1 | AY.9 | 0.000068 |
N | 67 | P67P | ccT | ccC | 1 | 1 | AY.9.1 | 0.000084 |
N | 67 | P67L | cCt | cTt | 1 | 1 | AY.9.1 | 0.000084 |
N | 67 | P67del | CCT | --- | 1 | 1 | AY.9.2 | 0.000037 |
N | 67 | P67L | cCt | cTt | 1 | 1 | AY.91 | 0.00073 |
N | 67 | P67S | Cct | Tct | 1 | 1 | AY.92 | 0.000287 |
N | 67 | P67L | cCt | cTt | 1 | 1 | AY.93 | 0.000273 |
N | 67 | P67P | ccT | ccC | 1 | 1 | AY.95 | 0.000761 |
N | 67 | P67del | CCT | --- | 1 | 1 | AY.98 | 0.000079 |
N | 67 | P67L | cCt | cTt | 1 | 1 | AY.98 | 0.000079 |
N | 67 | P67H | cCt | cAt | 1 | 1 | AY.98.1 | 0.000048 |
N | 67 | P67P | ccT | ccC | 1 | 1 | AY.98.1 | 0.000048 |
N | 67 | P67del | CCT | --- | 1 | 1 | AY.99 | 0.001049 |
N | 67 | P67P | ccT | ccA | 1 | 1 | AY.99 | 0.001049 |
N | 67 | P67H | cCt | cAt | 1 | 1 | AY.99.2 | 0.000092 |
N | 67 | P67P | ccT | ccC | 1 | 1 | AY.99.2 | 0.000092 |
N | 67 | P67L | cCt | cTt | 1 | 1 | AY.99.2 | 0.000092 |
N | 67 | P67del | CCT | --- | 1 | 1 | AZ.2 | 0.000821 |
N | 67 | P67V | CCt | GTt | 1 | 1 | B | 0.000128 |
N | 67 | P67del | CCT | --- | 1 | 1 | B.1 | 0.000009 |
N | 67 | P67del | CCT | --- | 1 | 1 | B.1.1 | 0.000018 |
N | 67 | P67H | cCT | cAC | 1 | 1 | B.1.1 | 0.000018 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.1.122 | 0.045455 |
N | 67 | P67del | CCT | --- | 1 | 1 | B.1.1.139 | 0.022727 |
N | 67 | P67P | ccT | ccC | 1 | 1 | B.1.1.141 | 0.002012 |
N | 67 | P67L | cCt | cTt | 1 | 1 | B.1.1.141 | 0.002012 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.1.148 | 0.008772 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.1.161 | 0.003534 |
N | 67 | P67P | ccT | ccC | 1 | 1 | B.1.1.170 | 0.001247 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.1.174 | 0.003378 |
N | 67 | P67L | cCt | cTt | 1 | 1 | B.1.1.189 | 0.001513 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.1.192 | 0.002309 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.1.198 | 0.001468 |
N | 67 | P67L | cCt | cTt | 1 | 1 | B.1.1.210 | 0.005714 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.1.214 | 0.000055 |
N | 67 | P67del | CCT | --- | 1 | 1 | B.1.1.216 | 0.00089 |
N | 67 | P67P | ccT | ccC | 1 | 1 | B.1.1.216 | 0.00089 |
N | 67 | P67L | cCt | cTt | 1 | 1 | B.1.1.222 | 0.000204 |
N | 67 | P67H | cCt | cAt | 1 | 1 | B.1.1.222 | 0.000204 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.1.236 | 0.006897 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.1.255 | 0.00303 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.1.265 | 0.003155 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.1.27 | 0.00565 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.1.277 | 0.000759 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.1.28 | 0.000311 |
N | 67 | P67H | cCt | cAt | 1 | 1 | B.1.1.303 | 0.002762 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.1.327 | 0.1 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.1.329 | 0.003846 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.1.334 | 0.016393 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.1.343 | 0.020833 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.1.362 | 0.005618 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.1.371 | 0.010417 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.1.377 | 0.001381 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.1.381 | 0.04 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.1.389 | 0.006061 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.1.398 | 0.003226 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.1.409 | 0.002833 |
N | 67 | P67L | cCt | cTt | 1 | 1 | B.1.1.420 | 0.001006 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.1.421 | 0.030303 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.1.466 | 0.008696 |
N | 67 | P67P | ccT | ccC | 1 | 1 | B.1.1.50 | 0.000679 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.1.518 | 0.006329 |
N | 67 | P67H | cCt | cAt | 1 | 1 | B.1.1.519 | 0.00004 |
N | 67 | P67del | CCT | --- | 1 | 1 | B.1.1.63 | 0.000386 |
N | 67 | P67G | CCT | GGA | 1 | 1 | B.1.1.7 | 0.000001 |
N | 67 | P67D | CCt | GAt | 1 | 1 | B.1.1.7 | 0.000001 |
N | 67 | P67V | CCT | GTA | 1 | 1 | B.1.1.7 | 0.000001 |
N | 67 | P67C | CCt | TGt | 1 | 1 | B.1.1.7 | 0.000001 |
N | 67 | P67L | cCt | cTt | 1 | 1 | B.1.1.70 | 0.000341 |
N | 67 | P67L | cCt | cTt | 1 | 1 | B.1.110.3 | 0.000718 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.110.3 | 0.000718 |
N | 67 | P67P | ccT | ccC | 1 | 1 | B.1.111 | 0.001175 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.119 | 0.010526 |
N | 67 | P67L | cCt | cTt | 1 | 1 | B.1.128 | 0.000635 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.128 | 0.000635 |
N | 67 | P67P | ccT | ccA | 1 | 1 | B.1.157 | 0.002985 |
N | 67 | P67R | cCt | cGt | 1 | 1 | B.1.160.14 | 0.002119 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.170 | 0.00431 |
N | 67 | P67C | CCt | TGt | 1 | 1 | B.1.177 | 0.000013 |
N | 67 | P67H | cCt | cAt | 1 | 1 | B.1.177 | 0.000013 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.177.12 | 0.000152 |
N | 67 | P67L | cCt | cTt | 1 | 1 | B.1.177.12 | 0.000152 |
N | 67 | P67L | cCt | cTt | 1 | 1 | B.1.177.4 | 0.000211 |
N | 67 | P67P | ccT | ccC | 1 | 1 | B.1.177.4 | 0.000211 |
N | 67 | P67L | cCt | cTt | 1 | 1 | B.1.177.42 | 0.000894 |
N | 67 | P67L | cCt | cTt | 1 | 1 | B.1.177.54 | 0.000606 |
N | 67 | P67del | CCT | --- | 1 | 1 | B.1.177.63 | 0.002703 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.177.7 | 0.000165 |
N | 67 | P67P | ccT | ccA | 1 | 1 | B.1.177.7 | 0.000165 |
N | 67 | P67T | Cct | Act | 1 | 1 | B.1.177.75 | 0.001041 |
N | 67 | P67T | Cct | Act | 1 | 1 | B.1.177.81 | 0.000189 |
N | 67 | P67H | cCt | cAt | 1 | 1 | B.1.177.86 | 0.000183 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.179 | 0.003759 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.189 | 0.004292 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.194 | 0.04 |
N | 67 | P67R | cCt | cGt | 1 | 1 | B.1.2 | 0.000009 |
N | 67 | P67L | cCt | cTt | 1 | 1 | B.1.203 | 0.0625 |
N | 67 | P67L | cCt | cTt | 1 | 1 | B.1.210 | 0.002132 |
N | 67 | P67T | Cct | Act | 1 | 1 | B.1.221 | 0.000071 |
N | 67 | P67H | cCt | cAt | 1 | 1 | B.1.234 | 0.000132 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.236 | 0.002053 |
N | 67 | P67P | ccT | ccC | 1 | 1 | B.1.240 | 0.000216 |
N | 67 | P67P | ccT | ccC | 1 | 1 | B.1.243 | 0.00007 |
N | 67 | P67F | CCt | TTt | 1 | 1 | B.1.243 | 0.00007 |
N | 67 | P67L | cCt | cTt | 1 | 1 | B.1.243 | 0.00007 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.247 | 0.014925 |
N | 67 | P67A | Cct | Gct | 1 | 1 | B.1.258 | 0.000067 |
N | 67 | P67L | cCt | cTt | 1 | 1 | B.1.258.11 | 0.000396 |
N | 67 | P67del | CCT | --- | 1 | 1 | B.1.258.11 | 0.000396 |
N | 67 | P67L | cCt | cTt | 1 | 1 | B.1.258.17 | 0.000104 |
N | 67 | P67L | cCt | cTt | 1 | 1 | B.1.265 | 0.001271 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.279 | 0.000514 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.305 | 0.002151 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.306 | 0.005714 |
N | 67 | P67L | cCt | cTt | 1 | 1 | B.1.311 | 0.000275 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.326 | 0.007576 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.335 | 0.010309 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.340 | 0.004292 |
N | 67 | P67L | cCt | cTt | 1 | 1 | B.1.349 | 0.000715 |
N | 67 | P67H | cCt | cAt | 1 | 1 | B.1.351 | 0.00003 |
N | 67 | P67T | Cct | Act | 1 | 1 | B.1.351 | 0.00003 |
N | 67 | P67R | cCt | cGt | 1 | 1 | B.1.351 | 0.00003 |
N | 67 | P67H | cCt | cAt | 1 | 1 | B.1.36 | 0.000146 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.36 | 0.000146 |
N | 67 | P67L | cCt | cTt | 1 | 1 | B.1.36.10 | 0.004785 |
N | 67 | P67L | cCt | cTt | 1 | 1 | B.1.36.29 | 0.000517 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.36.35 | 0.002604 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.36.39 | 0.002217 |
N | 67 | P67L | cCT | cTC | 1 | 1 | B.1.36.8 | 0.001 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.36.9 | 0.003215 |
N | 67 | P67P | ccT | ccC | 1 | 1 | B.1.36.9 | 0.003215 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.363 | 0.012987 |
N | 67 | P67L | cCt | cTt | 1 | 1 | B.1.367 | 0.000792 |
N | 67 | P67L | cCt | cTt | 1 | 1 | B.1.369 | 0.000285 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.370 | 0.008 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.371 | 0.001122 |
N | 67 | P67H | cCt | cAt | 1 | 1 | B.1.380 | 0.006623 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.391 | 0.001127 |
N | 67 | P67L | cCt | cTt | 1 | 1 | B.1.391 | 0.001127 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.400.1 | 0.015152 |
N | 67 | P67L | cCt | cTt | 1 | 1 | B.1.404 | 0.001302 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.404 | 0.001302 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.409 | 0.000781 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.413 | 0.004255 |
N | 67 | P67del | CCT | --- | 1 | 1 | B.1.415 | 0.014286 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.417 | 0.028571 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.423 | 0.010204 |
N | 67 | P67R | cCt | cGt | 1 | 1 | B.1.429 | 0.000024 |
N | 67 | P67del | CCT | --- | 1 | 1 | B.1.429 | 0.000024 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.433 | 0.003195 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.437 | 0.020833 |
N | 67 | P67L | cCt | cTt | 1 | 1 | B.1.438 | 0.006536 |
N | 67 | P67del | CCT | --- | 1 | 1 | B.1.439 | 0.005917 |
N | 67 | P67P | ccT | ccC | 1 | 1 | B.1.441 | 0.009615 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.443 | 0.004673 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.459 | 0.004082 |
N | 67 | P67L | cCt | cTt | 1 | 1 | B.1.471 | 0.002732 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.473 | 0.019231 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.485 | 0.014925 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.497 | 0.000315 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.501 | 0.007353 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.503 | 0.002488 |
N | 67 | P67P | ccT | ccC | 1 | 1 | B.1.517 | 0.000427 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.524 | 0.001406 |
N | 67 | P67P | ccT | ccC | 1 | 1 | B.1.538 | 0.008065 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.556 | 0.007519 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.558 | 0.004566 |
N | 67 | P67H | cCt | cAt | 1 | 1 | B.1.561 | 0.000397 |
N | 67 | P67L | cCt | cTt | 1 | 1 | B.1.565 | 0.00081 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.569 | 0.014493 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.571 | 0.009709 |
N | 67 | P67P | ccT | ccC | 1 | 1 | B.1.576 | 0.000907 |
N | 67 | P67F | CCt | TTt | 1 | 1 | B.1.577 | 0.000687 |
N | 67 | P67L | cCt | cTt | 1 | 1 | B.1.577 | 0.000687 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.595.2 | 0.04 |
N | 67 | P67H | cCt | cAt | 1 | 1 | B.1.596 | 0.000087 |
N | 67 | P67R | cCt | cGt | 1 | 1 | B.1.596 | 0.000087 |
N | 67 | P67F | CCt | TTt | 1 | 1 | B.1.596 | 0.000087 |
N | 67 | P67P | ccT | ccC | 1 | 1 | B.1.599 | 0.00365 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.602 | 0.006536 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.605 | 0.005952 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.611 | 0.04 |
N | 67 | P67L | cCt | cTt | 1 | 1 | B.1.617.1 | 0.000129 |
N | 67 | P67E | CCT | GAA | 1 | 1 | B.1.617.2 | 0.000004 |
N | 67 | P67del | CCT | --- | 1 | 1 | B.1.617.2 | 0.000004 |
N | 67 | P67Q | cCT | cAA | 1 | 1 | B.1.617.2 | 0.000004 |
N | 67 | P67D | CCt | GAt | 1 | 1 | B.1.617.2 | 0.000004 |
N | 67 | P67L | cCt | cTt | 1 | 1 | B.1.621 | 0.000089 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.628 | 0.000352 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.631 | 0.003367 |
N | 67 | P67L | cCt | cTt | 1 | 1 | B.1.637 | 0.000073 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.67 | 0.043478 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.70 | 0.02439 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.81 | 0.021277 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.1.94 | 0.027027 |
N | 67 | P67S | Cct | Tct | 1 | 1 | B.15 | 0.017544 |
N | 67 | P67L | cCt | cTt | 1 | 1 | B.40 | 0.000364 |
N | 67 | P67T | Cct | Act | 1 | 1 | C.18 | 0.002591 |
N | 67 | P67S | Cct | Tct | 1 | 1 | C.35 | 0.000774 |
N | 67 | P67T | Cct | Act | 1 | 1 | C.37 | 0.000116 |
N | 67 | P67R | cCt | cGt | 1 | 1 | D.2 | 0.000075 |
N | 67 | P67L | cCt | cTt | 1 | 1 | L.1 | 0.001905 |
N | 67 | P67del | CCT | --- | 1 | 1 | P.1 | 0.000016 |
N | 67 | P67P | ccT | ccC | 1 | 1 | P.1.1 | 0.000318 |
N | 67 | P67H | cCt | cAt | 1 | 1 | P.1.1 | 0.000318 |
N | 67 | P67S | Cct | Tct | 1 | 1 | P.1.10 | 0.000269 |
N | 67 | P67P | ccT | ccC | 1 | 1 | P.1.13 | 0.000898 |
N | 67 | P67S | Cct | Tct | 1 | 1 | P.1.7 | 0.000319 |
N | 67 | P67L | cCt | cTt | 1 | 1 | Q.3 | 0.000145 |
N | 67 | P67S | Cct | Tct | 1 | 1 | Q.3 | 0.000145 |
N | 67 | P67P | ccT | ccC | 1 | 1 | Q.8 | 0.000165 |
N | 67 | P67P | ccT | ccC | 1 | 1 | R.1 | 0.00009 |
N | 67 | P67T | Cct | Act | 1 | 1 | R.1 | 0.00009 |
N | 67 | P67L | cCt | cTt | 1 | 1 | W.4 | 0.001351 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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