CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : CodonNum = 6 & Codon = cTc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N6P6LnonsyncCccTc57355735128289-28291

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N6P6LcCccTc57355735All0.001097
N6P6LcCccTc18121812B.1.438.10.194358
N6P6LcCccTc753753AY.1030.004675
N6P6LcCccTc382382B.1.617.20.001438
N6P6LcCccTc375375B.1.1.70.000336
N6P6LcCccTc235235AY.40.000366
N6P6LcCccTc210210B.1.1.1590.981308
N6P6LcCccTc177177AY.440.001077
N6P6LcCccTc155155AY.360.022973
N6P6LcCccTc146146B.1.20.001286
N6P6LcCccTc131131B.10.0012
N6P6LcCccTc8080AY.1020.002121
N6P6LcCccTc6464AY.1210.00866
N6P6LcCccTc6060B.1.10.001088
N6P6LcCccTc5757P.10.000898
N6P6LcCccTc5656AY.260.001585
N6P6LcCccTc5252AY.250.000313
N6P6LcCccTc4747B.1.2430.00327
N6P6LcCccTc4141AY.430.000182
N6P6LcCccTc3232AY.30.000318
N6P6LcCccTc3232B.1.3510.000951
N6P6LcCccTc3131AY.230.002162
N6P6LcCccTc2929R.10.00261
N6P6LcCccTc2828AY.330.00187
N6P6LcCccTc2626AY.1050.01672
N6P6LcCccTc2323B.1.1770.000303
N6P6LcCccTc2020AY.50.000413
N6P6LcCccTc1818AY.290.000284
N6P6LcCccTc1818B.1.1.5190.000715
N6P6LcCccTc1717B.1.1.2220.003468
N6P6LcCccTc1616B.1.1.4240.727273
N6P6LcCccTc1616B.1.3690.004564
N6P6LcCccTc1616B.1.5170.006832
N6P6LcCccTc1515B.1.1110.017626
N6P6LcCccTc1414AY.200.000544
N6P6LcCccTc1414B.1.1.3970.031532
N6P6LcCccTc1313AY.460.001353
N6P6LcCccTc1313B.1.2340.001715
N6P6LcCccTc1313B.1.36.170.006423
N6P6LcCccTc1313B.1.5770.008935
N6P6LcCccTc1212AY.9.10.001005
N6P6LcCccTc1212B.1.1.4060.077922
N6P6LcCccTc1111AY.1170.00093
N6P6LcCccTc1111P.1.160.004115
N6P6LcCccTc1010B.1.5960.000871
N6P6LcCccTc99AY.39.20.013867
N6P6LcCccTc99AY.470.00028
N6P6LcCccTc99B.1.2580.000599
N6P6LcCccTc88AY.390.000198
N6P6LcCccTc88AY.550.007339
N6P6LcCccTc88AY.640.004762
N6P6LcCccTc88AY.740.000925
N6P6LcCccTc88B.1.177.320.010796
N6P6LcCccTc77AY.4.20.000152
N6P6LcCccTc77B.1.617.10.000903
N6P6LcCccTc77P.1.140.000335
N6P6LcCccTc66AY.1000.000276
N6P6LcCccTc66AY.4.50.000645
N6P6LcCccTc66AY.46.60.000433
N6P6LcCccTc66AY.950.004566
N6P6LcCccTc66AY.980.000474
N6P6LcCccTc66AY.98.10.000291
N6P6LcCccTc66B.1.1.280.001867
N6P6LcCccTc66B.1.2210.000426
N6P6LcCccTc66B.1.2400.001293
N6P6LcCccTc66B.1.2410.00487
N6P6LcCccTc66B.1.5260.000141
N6P6LcCccTc66B.6.60.005333
N6P6LcCccTc55AY.1180.000313
N6P6LcCccTc55AY.150.011111
N6P6LcCccTc55AY.610.000524
N6P6LcCccTc55B.1.1.3170.002058
N6P6LcCccTc55B.1.1600.000156
N6P6LcCccTc55B.1.360.00073
N6P6LcCccTc55B.1.4290.000118
N6P6LcCccTc44A.2.50.001996
N6P6LcCccTc44AY.116.10.001246
N6P6LcCccTc44AY.1200.000149
N6P6LcCccTc44AY.420.000161
N6P6LcCccTc44AY.9.20.000147
N6P6LcCccTc44AY.99.20.000369
N6P6LcCccTc44B.1.1.330.001684
N6P6LcCccTc44B.1.1.370.000771
N6P6LcCccTc44B.1.1.500.002716
N6P6LcCccTc44B.1.6210.000354
N6P6LcCccTc44B.1.6230.002146
N6P6LcCccTc44P.1.100.001078
N6P6LcCccTc44P.1.170.000647
N6P6LcCccTc33A0.001161
N6P6LcCccTc33AY.140.000264
N6P6LcCccTc33AY.270.000194
N6P6LcCccTc33AY.3.10.000256
N6P6LcCccTc33AY.350.000699
N6P6LcCccTc33AY.60.000123
N6P6LcCccTc33AY.670.001393
N6P6LcCccTc33AY.750.000168
N6P6LcCccTc33AY.840.001312
N6P6LcCccTc33AY.90.000203
N6P6LcCccTc33B0.000383
N6P6LcCccTc33B.1.1.4820.069767
N6P6LcCccTc33B.1.177.810.000568
N6P6LcCccTc33B.1.4380.019608
N6P6LcCccTc33B.1.6090.001438
N6P6LcCccTc33C.20.048387
N6P6LcCccTc33P.1.70.000958
N6P6LcCccTc22A.210.00554
N6P6LcCccTc22AY.1130.000285
N6P6LcCccTc22AY.300.000791
N6P6LcCccTc22AY.450.000243
N6P6LcCccTc22AY.46.20.001271
N6P6LcCccTc22AY.5.40.000553
N6P6LcCccTc22AY.520.001629
N6P6LcCccTc22AY.540.000191
N6P6LcCccTc22AY.590.001059
N6P6LcCccTc22AY.660.002139
N6P6LcCccTc22AY.75.10.000361
N6P6LcCccTc22AY.820.002714
N6P6LcCccTc22AY.850.000854
N6P6LcCccTc22AY.890.009804
N6P6LcCccTc22B.1.1.2200.003717
N6P6LcCccTc22B.1.1.2840.000215
N6P6LcCccTc22B.1.1.3560.017094
N6P6LcCccTc22B.1.1.4160.00181
N6P6LcCccTc22B.1.110.30.001437
N6P6LcCccTc22B.1.177.540.001213
N6P6LcCccTc22B.1.177.870.001456
N6P6LcCccTc22B.1.4270.000101
N6P6LcCccTc22B.1.5070.022472
N6P6LcCccTc22B.1.5250.000226
N6P6LcCccTc22B.1.5570.1
N6P6LcCccTc22B.1.5970.009259
N6P6LcCccTc22B.1.6370.000146
N6P6LcCccTc22L.20.022727
N6P6LcCccTc22P.1.130.001797
N6P6LcCccTc22P.20.000373
N6P6LcCccTc11A.2.5.20.001572
N6P6LcCccTc11AE.80.000489
N6P6LcCccTc11AY.1010.00049
N6P6LcCccTc11AY.1100.000113
N6P6LcCccTc11AY.1110.000183
N6P6LcCccTc11AY.1140.000231
N6P6LcCccTc11AY.1190.000035
N6P6LcCccTc11AY.120.000316
N6P6LcCccTc11AY.120.10.000321
N6P6LcCccTc11AY.120.20.001285
N6P6LcCccTc11AY.16.10.00047
N6P6LcCccTc11AY.23.10.000417
N6P6LcCccTc11AY.240.000431
N6P6LcCccTc11AY.340.000097
N6P6LcCccTc11AY.380.000499
N6P6LcCccTc11AY.4.2.10.000149
N6P6LcCccTc11AY.46.10.001027
N6P6LcCccTc11AY.46.40.000165
N6P6LcCccTc11AY.480.000465
N6P6LcCccTc11AY.490.003195
N6P6LcCccTc11AY.5.30.000337
N6P6LcCccTc11AY.530.000288
N6P6LcCccTc11AY.7.10.000113
N6P6LcCccTc11AY.860.00083
N6P6LcCccTc11AY.870.000833
N6P6LcCccTc11AY.99.10.001553
N6P6LcCccTc11B.1.1.10.000327
N6P6LcCccTc11B.1.1.1410.002012
N6P6LcCccTc11B.1.1.1760.000439
N6P6LcCccTc11B.1.1.1890.001513
N6P6LcCccTc11B.1.1.2160.00089
N6P6LcCccTc11B.1.1.250.000569
N6P6LcCccTc11B.1.1.3020.002075
N6P6LcCccTc11B.1.1.3060.000438
N6P6LcCccTc11B.1.1.3890.006061
N6P6LcCccTc11B.1.1.4370.010417
N6P6LcCccTc11B.1.1.5250.005464
N6P6LcCccTc11B.1.177.100.000878
N6P6LcCccTc11B.1.177.120.000152
N6P6LcCccTc11B.1.177.230.003236
N6P6LcCccTc11B.1.177.410.0025
N6P6LcCccTc11B.1.177.460.000918
N6P6LcCccTc11B.1.177.740.015152
N6P6LcCccTc11B.1.177.800.001912
N6P6LcCccTc11B.1.177.90.001332
N6P6LcCccTc11B.1.2230.002778
N6P6LcCccTc11B.1.2360.002053
N6P6LcCccTc11B.1.2390.001221
N6P6LcCccTc11B.1.258.170.000104
N6P6LcCccTc11B.1.3190.003049
N6P6LcCccTc11B.1.351.20.000303
N6P6LcCccTc11B.1.4080.00369
N6P6LcCccTc11B.1.4590.004082
N6P6LcCccTc11B.1.4650.003802
N6P6LcCccTc11B.1.466.20.000391
N6P6LcCccTc11B.1.5380.008065
N6P6LcCccTc11B.1.5610.000397
N6P6LcCccTc11B.1.5650.00081
N6P6LcCccTc11B.1.5800.004065
N6P6LcCccTc11B.1.6190.000871
N6P6LcCccTc11B.1.621.10.000506
N6P6LcCccTc11B.610.005747
N6P6LcCccTc11C.370.000116
N6P6LcCccTc11D.20.000075
N6P6LcCccTc11N.30.005814
N6P6LcCccTc11N.60.007092
N6P6LcCccTc11N.90.005952
N6P6LcCccTc11P.1.120.000484
N6P6LcCccTc11P.1.150.000232
N6P6LcCccTc11Q.10.000126
N6P6LcCccTc11Z.10.00289