CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : CodonNum = 56 & Codon = Ttc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N56L56FnonsynCtcTtc5135120.99805128439-28441

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N56L56FCtcTtc512513All0.000098
N56L56FCtcTtc138138AY.40.000215
N56L56FCtcTtc4444AY.440.000268
N56L56FCtcTtc3939AY.10.015433
N56L56FCtcTtc3737AY.39.10.001466
N56L56FCtcTtc3535B.1.1.70.000031
N56L56FCtcTtc3030AY.90.002028
N56L56FCtcTtc1818AY.250.000108
N56L56FCtcTtc1818B.1.617.20.000068
N56L56FCtcTtc1414AY.1180.000877
N56L56FCtcTtc1111AY.1030.000068
N56L56FCtcTtc99AY.1200.000335
N56L56FCtcTtc88AY.390.000198
N56L56FCtcTtc88B.1.6210.000708
N56L56FCtcTtc77AY.30.00007
N56L56FCtcTtc55AY.1020.000133
N56L56FCtcTtc55AY.430.000022
N56L56FCtcTtc55AY.470.000156
N56L56FCtcTtc55B.1.177.40.001055
N56L56FCtcTtc44AY.680.001095
N56L56FCtcTtc44B.1.3510.000119
N56L56FCtcTtc44B.1.438.10.000429
N56L56FCtcTtc44P.10.000063
N56L56FCtcTtc33AY.98.10.000145
N56L56FCtcTtc33B.1.1100.013575
N56L56FCtcTtc33B.1.1770.00004
N56L56FCtcTtc22AY.140.000176
N56L56FCtcTtc22AY.70.000392
N56L56FCtcTtc22AY.7.20.001119
N56L56FCtcTtc22B.10.000018
N56L56FCtcTtc12B.1.10.000018
N56L56FCtcTtc22B.1.1600.000062
N56L56FCtcTtc22B.1.2430.000139
N56L56FCtcTtc22B.1.466.20.000782
N56L56FCtcTtc22B.1.5260.000047
N56L56FCtcTtc22D.20.00015
N56L56FCtcTtc22P.1.120.000968
N56L56FCtcTtc11AY.1000.000046
N56L56FCtcTtc11AY.1130.000142
N56L56FCtcTtc11AY.1190.000035
N56L56FCtcTtc11AY.1210.000135
N56L56FCtcTtc11AY.200.000039
N56L56FCtcTtc11AY.3.10.000085
N56L56FCtcTtc11AY.4.50.000107
N56L56FCtcTtc11AY.50.000021
N56L56FCtcTtc11AY.590.00053
N56L56FCtcTtc11AY.610.000105
N56L56FCtcTtc11B0.000128
N56L56FCtcTtc11B.1.1.1570.000913
N56L56FCtcTtc11B.1.1.2140.000055
N56L56FCtcTtc11B.1.1.3180.000302
N56L56FCtcTtc11B.1.1.4340.000349
N56L56FCtcTtc11B.1.1.5190.00004
N56L56FCtcTtc11B.1.1.830.00271
N56L56FCtcTtc11B.1.20.000009
N56L56FCtcTtc11B.1.2210.000071
N56L56FCtcTtc11B.1.258.170.000104
N56L56FCtcTtc11B.1.360.000146
N56L56FCtcTtc11B.1.3960.000706
N56L56FCtcTtc11B.1.4290.000024
N56L56FCtcTtc11B.1.5950.000261
N56L56FCtcTtc11B.1.617.10.000129
N56L56FCtcTtc11B.1.6280.000352
N56L56FCtcTtc11B.1.6370.000073
N56L56FCtcTtc11P.1.140.000048
N56L56FCtcTtc11P.1.150.000232
N56L56FCtcTtc11P.1.170.000162