CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
N | 418 | Q418H | nonsyn | caG | caT | 17987 | 17920 | 0.996275 | 29525-29527 | |
N | 418 | Q418H | nonsyn | caG | caC | 17987 | 67 | 0.00372491 | 29525-29527 | |
N | 418 | Q418Q | syn | caG | caA | 717 | 717 | 1 | 29525-29527 | |
N | 418 | Q418L | nonsyn | cAg | cTg | 581 | 578 | 0.994837 | 29525-29527 | |
N | 418 | Q418L | nonsyn | cAG | cTA | 581 | 2 | 0.00344234 | 29525-29527 | |
N | 418 | Q418L | nonsyn | CAg | TTg | 581 | 1 | 0.00172117 | 29525-29527 | |
N | 418 | Q418R | nonsyn | cAg | cGg | 358 | 358 | 1 | 29525-29527 | |
N | 418 | Q418X | nonsyn | Cag | Tag | 264 | 263 | 0.996212 | 29525-29527 | |
N | 418 | Q418X | nonsyn | CaG | TaA | 264 | 1 | 0.00378788 | 29525-29527 | |
N | 418 | Q418del | del | CAG | --- | 41 | 41 | 1 | 29525-29527 | |
N | 418 | Q418P | nonsyn | cAg | cCg | 28 | 28 | 1 | 29525-29527 | |
N | 418 | Q418K | nonsyn | Cag | Aag | 23 | 23 | 1 | 29525-29527 | |
N | 418 | Q418E | nonsyn | Cag | Gag | 21 | 21 | 1 | 29525-29527 | |
N | 418 | Q418del1 | del | Cag | -ag | 11 | 6 | 0.545455 | 29525-29527 | |
N | 418 | Q418del1 | del | caG | ca- | 11 | 5 | 0.454545 | 29525-29527 | |
N | 418 | Q418Y | nonsyn | CaG | TaT | 6 | 5 | 0.833333 | 29525-29527 | |
N | 418 | Q418Y | nonsyn | CaG | TaC | 6 | 1 | 0.166667 | 29525-29527 | |
N | 418 | Q418D | nonsyn | CaG | GaC | 4 | 4 | 1 | 29525-29527 | |
N | 418 | Q418del2 | del | CAG | --A | 2 | 1 | 0.5 | 29525-29527 | |
N | 418 | Q418del2 | del | cAG | c-- | 2 | 1 | 0.5 | 29525-29527 | |
N | 418 | Q418N | nonsyn | CaG | AaT | 1 | 1 | 1 | 29525-29527 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
N | 418 | Q418H | caG | caT | 17920 | 17987 | All | 0.003427 |
N | 418 | Q418H | caG | caC | 67 | 17987 | All | 0.000013 |
N | 418 | Q418H | caG | caT | 11103 | 11103 | R.1 | 0.99937 |
N | 418 | Q418H | caG | caT | 2130 | 2131 | B.1.1.519 | 0.084584 |
N | 418 | Q418H | caG | caC | 1 | 2131 | B.1.1.519 | 0.00004 |
N | 418 | Q418Q | caG | caA | 717 | 717 | All | 0.000137 |
N | 418 | Q418H | caG | caT | 609 | 610 | B.1.617.2 | 0.002293 |
N | 418 | Q418H | caG | caC | 1 | 610 | B.1.617.2 | 0.000004 |
N | 418 | Q418L | cAg | cTg | 578 | 581 | All | 0.000111 |
N | 418 | Q418L | cAG | cTA | 2 | 581 | All | 0 |
N | 418 | Q418L | CAg | TTg | 1 | 581 | All | 0 |
N | 418 | Q418H | caG | caT | 416 | 416 | AY.75 | 0.023305 |
N | 418 | Q418R | cAg | cGg | 358 | 358 | All | 0.000068 |
N | 418 | Q418H | caG | caT | 320 | 321 | B.1.2 | 0.002818 |
N | 418 | Q418H | caG | caC | 1 | 321 | B.1.2 | 0.000009 |
N | 418 | Q418H | caG | caT | 314 | 314 | AY.102 | 0.008325 |
N | 418 | Q418H | caG | caT | 293 | 294 | B.1.1.7 | 0.000262 |
N | 418 | Q418H | caG | caC | 1 | 294 | B.1.1.7 | 0.000001 |
N | 418 | Q418H | caG | caT | 287 | 288 | B.1.1 | 0.005206 |
N | 418 | Q418H | caG | caC | 1 | 288 | B.1.1 | 0.000018 |
N | 418 | Q418H | caG | caT | 285 | 285 | AY.98.1 | 0.013803 |
N | 418 | Q418H | caG | caT | 280 | 280 | B.1.1.214 | 0.015528 |
N | 418 | Q418X | Cag | Tag | 263 | 264 | All | 0.00005 |
N | 418 | Q418X | CaG | TaA | 1 | 264 | All | 0 |
N | 418 | Q418R | cAg | cGg | 225 | 225 | B.1.1.7 | 0.000201 |
N | 418 | Q418H | caG | caT | 182 | 183 | B.1.351 | 0.00541 |
N | 418 | Q418H | caG | caC | 1 | 183 | B.1.351 | 0.00003 |
N | 418 | Q418H | caG | caT | 159 | 159 | AY.103 | 0.000987 |
N | 418 | Q418H | caG | caT | 139 | 140 | B.1.177 | 0.00183 |
N | 418 | Q418H | caG | caC | 1 | 140 | B.1.177 | 0.000013 |
N | 418 | Q418H | caG | caT | 127 | 134 | AY.4 | 0.000198 |
N | 418 | Q418H | caG | caC | 7 | 134 | AY.4 | 0.000011 |
N | 418 | Q418H | caG | caT | 116 | 118 | B.1 | 0.001063 |
N | 418 | Q418H | caG | caC | 2 | 118 | B.1 | 0.000018 |
N | 418 | Q418L | cAg | cTg | 118 | 118 | B.1.1.7 | 0.000106 |
N | 418 | Q418L | cAg | cTg | 107 | 107 | B.1.617.2 | 0.000403 |
N | 418 | Q418H | caG | caT | 103 | 103 | B.1.1.220 | 0.19145 |
N | 418 | Q418Q | caG | caA | 97 | 97 | AY.26 | 0.002746 |
N | 418 | Q418Q | caG | caA | 92 | 92 | B.1.1.7 | 0.000082 |
N | 418 | Q418H | caG | caT | 79 | 79 | AY.39 | 0.001952 |
N | 418 | Q418H | caG | caT | 73 | 75 | AY.43 | 0.000323 |
N | 418 | Q418H | caG | caC | 2 | 75 | AY.43 | 0.000009 |
N | 418 | Q418L | cAg | cTg | 61 | 61 | AY.4 | 0.000095 |
N | 418 | Q418L | cAg | cTg | 59 | 59 | AY.75 | 0.003305 |
N | 418 | Q418Q | caG | caA | 59 | 59 | B.1.351 | 0.001754 |
N | 418 | Q418H | caG | caT | 43 | 43 | B.1.575 | 0.013046 |
N | 418 | Q418Q | caG | caA | 42 | 42 | B.1.617.2 | 0.000158 |
N | 418 | Q418del | CAG | --- | 41 | 41 | All | 0.000008 |
N | 418 | Q418Q | caG | caA | 39 | 39 | AY.4 | 0.000061 |
N | 418 | Q418L | cAg | cTg | 39 | 39 | B.1.351.2 | 0.0118 |
N | 418 | Q418X | Cag | Tag | 36 | 36 | B.1.1.7 | 0.000032 |
N | 418 | Q418H | caG | caT | 33 | 34 | AY.44 | 0.000201 |
N | 418 | Q418H | caG | caC | 1 | 34 | AY.44 | 0.000006 |
N | 418 | Q418H | caG | caT | 34 | 34 | B.1.1.525 | 0.185792 |
N | 418 | Q418Q | caG | caA | 34 | 34 | B.1.177.12 | 0.005158 |
N | 418 | Q418H | caG | caT | 31 | 31 | AY.3 | 0.000308 |
N | 418 | Q418X | Cag | Tag | 31 | 31 | AY.4 | 0.000048 |
N | 418 | Q418H | caG | caC | 17 | 31 | AY.4.2 | 0.000369 |
N | 418 | Q418H | caG | caT | 14 | 31 | AY.4.2 | 0.000304 |
N | 418 | Q418H | caG | caT | 30 | 30 | B.1.243 | 0.002088 |
N | 418 | Q418Q | caG | caA | 29 | 29 | B.1.594 | 0.90625 |
N | 418 | Q418H | caG | caT | 29 | 29 | B.1.625 | 0.068235 |
N | 418 | Q418H | caG | caT | 29 | 29 | P.1 | 0.000457 |
N | 418 | Q418P | cAg | cCg | 28 | 28 | All | 0.000005 |
N | 418 | Q418L | cAg | cTg | 28 | 28 | B.1.1.289 | 0.058333 |
N | 418 | Q418Q | caG | caA | 28 | 28 | P.1 | 0.000441 |
N | 418 | Q418H | caG | caT | 24 | 27 | AY.25 | 0.000144 |
N | 418 | Q418H | caG | caC | 3 | 27 | AY.25 | 0.000018 |
N | 418 | Q418H | caG | caT | 26 | 27 | AY.5 | 0.000537 |
N | 418 | Q418H | caG | caC | 1 | 27 | AY.5 | 0.000021 |
N | 418 | Q418Q | caG | caA | 25 | 25 | B.1.1.519 | 0.000993 |
N | 418 | Q418R | cAg | cGg | 25 | 25 | B.1.617.2 | 0.000094 |
N | 418 | Q418Q | caG | caA | 24 | 24 | AY.103 | 0.000149 |
N | 418 | Q418L | cAg | cTg | 24 | 24 | AY.43 | 0.000106 |
N | 418 | Q418K | Cag | Aag | 23 | 23 | All | 0.000004 |
N | 418 | Q418H | caG | caT | 23 | 23 | AY.120 | 0.000855 |
N | 418 | Q418H | caG | caT | 22 | 22 | AY.33 | 0.001469 |
N | 418 | Q418R | cAg | cGg | 22 | 22 | B.1.177 | 0.00029 |
N | 418 | Q418E | Cag | Gag | 21 | 21 | All | 0.000004 |
N | 418 | Q418X | Cag | Tag | 20 | 20 | AY.43 | 0.000089 |
N | 418 | Q418Q | caG | caA | 19 | 19 | AY.25 | 0.000114 |
N | 418 | Q418Q | caG | caA | 19 | 19 | P.1.4 | 0.018555 |
N | 418 | Q418H | caG | caT | 18 | 18 | P.1.17.1 | 0.015748 |
N | 418 | Q418H | caG | caT | 17 | 17 | AY.119 | 0.0006 |
N | 418 | Q418H | caG | caT | 17 | 17 | AY.20 | 0.000661 |
N | 418 | Q418H | caG | caT | 17 | 17 | AY.9.2 | 0.000624 |
N | 418 | Q418H | caG | caT | 17 | 17 | B.1.1.317 | 0.006999 |
N | 418 | Q418L | cAg | cTg | 17 | 17 | B.1.177 | 0.000224 |
N | 418 | Q418Q | caG | caA | 16 | 16 | AY.23 | 0.001116 |
N | 418 | Q418H | caG | caT | 16 | 16 | B.1.596 | 0.001394 |
N | 418 | Q418H | caG | caT | 15 | 15 | AY.73 | 0.00998 |
N | 418 | Q418Q | caG | caA | 15 | 15 | B.1.177 | 0.000198 |
N | 418 | Q418H | caG | caT | 14 | 14 | AY.98 | 0.001106 |
N | 418 | Q418Q | caG | caA | 14 | 14 | B | 0.001789 |
N | 418 | Q418H | caG | caT | 13 | 13 | AY.7.1 | 0.001465 |
N | 418 | Q418H | caG | caT | 13 | 13 | B.1.1.280 | 0.040123 |
N | 418 | Q418H | caG | caT | 9 | 13 | B.1.526 | 0.000212 |
N | 418 | Q418H | caG | caC | 4 | 13 | B.1.526 | 0.000094 |
N | 418 | Q418X | Cag | Tag | 13 | 13 | B.1.617.2 | 0.000049 |
N | 418 | Q418L | cAg | cTg | 12 | 12 | AY.103 | 0.000075 |
N | 418 | Q418X | Cag | Tag | 12 | 12 | AY.3 | 0.000119 |
N | 418 | Q418H | caG | caT | 12 | 12 | B.1.1.10 | 0.013378 |
N | 418 | Q418del1 | Cag | -ag | 6 | 11 | All | 0.000001 |
N | 418 | Q418del1 | caG | ca- | 5 | 11 | All | 0.000001 |
N | 418 | Q418L | cAg | cTg | 11 | 11 | AY.39 | 0.000272 |
N | 418 | Q418R | cAg | cGg | 11 | 11 | AY.4 | 0.000017 |
N | 418 | Q418L | cAg | cTg | 11 | 11 | AY.44 | 0.000067 |
N | 418 | Q418X | Cag | Tag | 11 | 11 | B.1 | 0.000101 |
N | 418 | Q418H | caG | caT | 11 | 11 | B.1.416 | 0.013959 |
N | 418 | Q418H | caG | caT | 10 | 10 | AY.29 | 0.000158 |
N | 418 | Q418H | caG | caT | 10 | 10 | AY.34 | 0.00097 |
N | 418 | Q418Q | caG | caA | 10 | 10 | B.1.160 | 0.000312 |
N | 418 | Q418H | caG | caT | 9 | 9 | AY.117 | 0.000761 |
N | 418 | Q418H | caG | caT | 9 | 9 | AY.39.1 | 0.000357 |
N | 418 | Q418H | caG | caT | 9 | 9 | AY.47 | 0.00028 |
N | 418 | Q418Q | caG | caA | 9 | 9 | B.1 | 0.000082 |
N | 418 | Q418X | Cag | Tag | 9 | 9 | B.1.177 | 0.000119 |
N | 418 | Q418Q | caG | caA | 9 | 9 | B.1.2 | 0.000079 |
N | 418 | Q418H | caG | caT | 9 | 9 | B.1.258.3 | 0.015075 |
N | 418 | Q418X | Cag | Tag | 9 | 9 | D.2 | 0.000675 |
N | 418 | Q418H | caG | caC | 5 | 8 | AY.45 | 0.000608 |
N | 418 | Q418H | caG | caT | 3 | 8 | AY.45 | 0.000365 |
N | 418 | Q418H | caG | caT | 7 | 8 | AY.46 | 0.000729 |
N | 418 | Q418H | caG | caC | 1 | 8 | AY.46 | 0.000104 |
N | 418 | Q418H | caG | caT | 8 | 8 | AY.84 | 0.0035 |
N | 418 | Q418H | caG | caT | 7 | 8 | B.1.160 | 0.000218 |
N | 418 | Q418H | caG | caC | 1 | 8 | B.1.160 | 0.000031 |
N | 418 | Q418H | caG | caT | 6 | 8 | B.1.429 | 0.000141 |
N | 418 | Q418H | caG | caC | 2 | 8 | B.1.429 | 0.000047 |
N | 418 | Q418H | caG | caT | 8 | 8 | P.1.14 | 0.000382 |
N | 418 | Q418H | caG | caT | 8 | 8 | P.1.17 | 0.001294 |
N | 418 | Q418H | caG | caT | 7 | 7 | AY.100 | 0.000322 |
N | 418 | Q418Q | caG | caA | 7 | 7 | AY.102 | 0.000186 |
N | 418 | Q418X | Cag | Tag | 7 | 7 | AY.103 | 0.000043 |
N | 418 | Q418L | cAg | cTg | 7 | 7 | AY.6 | 0.000288 |
N | 418 | Q418Q | caG | caA | 7 | 7 | B.1.1 | 0.000127 |
N | 418 | Q418H | caG | caT | 7 | 7 | B.1.1.222 | 0.001428 |
N | 418 | Q418K | Cag | Aag | 7 | 7 | B.1.1.7 | 0.000006 |
N | 418 | Q418H | caG | caT | 7 | 7 | B.1.177.77 | 0.005084 |
N | 418 | Q418H | caG | caT | 7 | 7 | B.1.177.85 | 0.038043 |
N | 418 | Q418Q | caG | caA | 7 | 7 | B.1.258 | 0.000466 |
N | 418 | Q418Y | CaG | TaT | 5 | 6 | All | 0.000001 |
N | 418 | Q418Y | CaG | TaC | 1 | 6 | All | 0 |
N | 418 | Q418H | caG | caT | 6 | 6 | AY.26 | 0.00017 |
N | 418 | Q418X | Cag | Tag | 6 | 6 | AY.33 | 0.000401 |
N | 418 | Q418X | Cag | Tag | 6 | 6 | AY.4.2 | 0.00013 |
N | 418 | Q418L | cAg | cTg | 6 | 6 | AY.46.6 | 0.000433 |
N | 418 | Q418R | cAg | cGg | 6 | 6 | AY.61 | 0.000629 |
N | 418 | Q418del | CAG | --- | 6 | 6 | B.1.1.7 | 0.000005 |
N | 418 | Q418X | Cag | Tag | 6 | 6 | B.1.2 | 0.000053 |
N | 418 | Q418R | cAg | cGg | 6 | 6 | B.1.561 | 0.002382 |
N | 418 | Q418X | Cag | Tag | 6 | 6 | P.1 | 0.000095 |
N | 418 | Q418Q | caG | caA | 5 | 5 | AY.100 | 0.00023 |
N | 418 | Q418Q | caG | caA | 5 | 5 | AY.3.1 | 0.000426 |
N | 418 | Q418Q | caG | caA | 5 | 5 | AY.39 | 0.000124 |
N | 418 | Q418Q | caG | caA | 5 | 5 | AY.43 | 0.000022 |
N | 418 | Q418X | Cag | Tag | 5 | 5 | AY.44 | 0.00003 |
N | 418 | Q418L | cAg | cTg | 5 | 5 | B.1 | 0.000046 |
N | 418 | Q418R | cAg | cGg | 5 | 5 | B.1.1 | 0.000091 |
N | 418 | Q418H | caG | caT | 5 | 5 | B.1.1.311 | 0.001791 |
N | 418 | Q418E | Cag | Gag | 5 | 5 | B.1.1.7 | 0.000004 |
N | 418 | Q418H | caG | caT | 5 | 5 | B.1.177.12 | 0.000758 |
N | 418 | Q418R | cAg | cGg | 5 | 5 | B.1.177.44 | 0.002595 |
N | 418 | Q418L | cAg | cTg | 5 | 5 | B.1.2 | 0.000044 |
N | 418 | Q418R | cAg | cGg | 5 | 5 | B.1.221 | 0.000355 |
N | 418 | Q418Q | caG | caA | 5 | 5 | B.1.601 | 0.151515 |
N | 418 | Q418del | CAG | --- | 5 | 5 | B.1.617.2 | 0.000019 |
N | 418 | Q418Q | caG | caA | 5 | 5 | B.1.628 | 0.001762 |
N | 418 | Q418L | cAg | cTg | 5 | 5 | B.1.637 | 0.000365 |
N | 418 | Q418X | Cag | Tag | 5 | 5 | C.36.3 | 0.002836 |
N | 418 | Q418H | caG | caT | 5 | 5 | C.37 | 0.00058 |
N | 418 | Q418D | CaG | GaC | 4 | 4 | All | 0.000001 |
N | 418 | Q418X | Cag | Tag | 4 | 4 | AY.102 | 0.000106 |
N | 418 | Q418Q | caG | caA | 4 | 4 | AY.113 | 0.00057 |
N | 418 | Q418X | Cag | Tag | 4 | 4 | AY.25 | 0.000024 |
N | 418 | Q418Q | caG | caA | 4 | 4 | AY.3 | 0.00004 |
N | 418 | Q418R | cAg | cGg | 4 | 4 | AY.39 | 0.000099 |
N | 418 | Q418H | caG | caT | 4 | 4 | AY.4.4 | 0.001637 |
N | 418 | Q418H | caG | caT | 4 | 4 | AY.42 | 0.000161 |
N | 418 | Q418Q | caG | caA | 4 | 4 | AY.44 | 0.000024 |
N | 418 | Q418R | cAg | cGg | 4 | 4 | AY.54 | 0.000381 |
N | 418 | Q418H | caG | caT | 3 | 4 | AY.6 | 0.000123 |
N | 418 | Q418H | caG | caC | 1 | 4 | AY.6 | 0.000041 |
N | 418 | Q418H | caG | caT | 4 | 4 | AY.61 | 0.000419 |
N | 418 | Q418H | caG | caT | 4 | 4 | AY.99.2 | 0.000369 |
N | 418 | Q418H | caG | caT | 4 | 4 | B.1.1.216 | 0.003562 |
N | 418 | Q418X | Cag | Tag | 4 | 4 | B.1.160 | 0.000125 |
N | 418 | Q418L | cAg | cTg | 4 | 4 | B.1.160 | 0.000125 |
N | 418 | Q418X | Cag | Tag | 4 | 4 | B.1.177.44 | 0.002076 |
N | 418 | Q418R | cAg | cGg | 4 | 4 | B.1.36 | 0.000584 |
N | 418 | Q418L | cAg | cTg | 4 | 4 | B.1.621 | 0.000354 |
N | 418 | Q418Q | caG | caA | 4 | 4 | B.1.637 | 0.000292 |
N | 418 | Q418L | cAg | cTg | 4 | 4 | P.1 | 0.000063 |
N | 418 | Q418H | caG | caT | 3 | 3 | A.2.5 | 0.001497 |
N | 418 | Q418L | cAg | cTg | 3 | 3 | AY.100 | 0.000138 |
N | 418 | Q418H | caG | caT | 3 | 3 | AY.106 | 0.001005 |
N | 418 | Q418L | cAg | cTg | 3 | 3 | AY.20 | 0.000117 |
N | 418 | Q418H | caG | caT | 3 | 3 | AY.23 | 0.000209 |
N | 418 | Q418R | cAg | cGg | 3 | 3 | AY.3 | 0.00003 |
N | 418 | Q418L | cAg | cTg | 2 | 3 | AY.3 | 0.00002 |
N | 418 | Q418L | CAg | TTg | 1 | 3 | AY.3 | 0.00001 |
N | 418 | Q418L | cAg | cTg | 3 | 3 | AY.30 | 0.001187 |
N | 418 | Q418X | Cag | Tag | 3 | 3 | AY.36 | 0.000445 |
N | 418 | Q418P | cAg | cCg | 3 | 3 | AY.39.1 | 0.000119 |
N | 418 | Q418P | cAg | cCg | 3 | 3 | AY.4 | 0.000005 |
N | 418 | Q418E | Cag | Gag | 3 | 3 | AY.44 | 0.000018 |
N | 418 | Q418K | Cag | Aag | 3 | 3 | AY.5 | 0.000062 |
N | 418 | Q418Q | caG | caA | 3 | 3 | AY.5 | 0.000062 |
N | 418 | Q418Q | caG | caA | 3 | 3 | AY.61 | 0.000314 |
N | 418 | Q418H | caG | caT | 3 | 3 | AY.62 | 0.001307 |
N | 418 | Q418X | Cag | Tag | 3 | 3 | AY.70 | 0.000626 |
N | 418 | Q418H | caG | caT | 3 | 3 | AY.75.1 | 0.000541 |
N | 418 | Q418L | cAg | cTg | 3 | 3 | AY.9.2 | 0.00011 |
N | 418 | Q418Q | caG | caA | 3 | 3 | AY.98.1 | 0.000145 |
N | 418 | Q418R | cAg | cGg | 3 | 3 | B.1 | 0.000027 |
N | 418 | Q418del | CAG | --- | 3 | 3 | B.1 | 0.000027 |
N | 418 | Q418X | Cag | Tag | 3 | 3 | B.1.1 | 0.000054 |
N | 418 | Q418H | caG | caT | 3 | 3 | B.1.1.161 | 0.010601 |
N | 418 | Q418H | caG | caT | 3 | 3 | B.1.1.318 | 0.000905 |
N | 418 | Q418L | cAg | cTg | 3 | 3 | B.1.1.33 | 0.001263 |
N | 418 | Q418H | caG | caT | 3 | 3 | B.1.1.37 | 0.000579 |
N | 418 | Q418H | caG | caT | 3 | 3 | B.1.1.39 | 0.001529 |
N | 418 | Q418H | caG | caT | 3 | 3 | B.1.1.521 | 0.016043 |
N | 418 | Q418P | cAg | cCg | 3 | 3 | B.1.1.7 | 0.000003 |
N | 418 | Q418H | caG | caT | 3 | 3 | B.1.1.83 | 0.00813 |
N | 418 | Q418Y | CaG | TaT | 3 | 3 | B.1.177 | 0.00004 |
N | 418 | Q418Q | caG | caA | 3 | 3 | B.1.177.7 | 0.000495 |
N | 418 | Q418H | caG | caT | 3 | 3 | B.1.351.2 | 0.000908 |
N | 418 | Q418H | caG | caT | 3 | 3 | B.1.351.3 | 0.002629 |
N | 418 | Q418Q | caG | caA | 3 | 3 | B.1.36.7 | 0.012 |
N | 418 | Q418Q | caG | caA | 3 | 3 | B.1.446 | 0.06 |
N | 418 | Q418H | caG | caT | 3 | 3 | B.1.525 | 0.000339 |
N | 418 | Q418H | caG | caT | 2 | 3 | B.1.577 | 0.001375 |
N | 418 | Q418H | caG | caC | 1 | 3 | B.1.577 | 0.000687 |
N | 418 | Q418H | caG | caT | 3 | 3 | B.1.621 | 0.000266 |
N | 418 | Q418H | caG | caT | 3 | 3 | B.1.621.1 | 0.001517 |
N | 418 | Q418H | caG | caT | 3 | 3 | B.1.637 | 0.000219 |
N | 418 | Q418H | caG | caT | 3 | 3 | B.1.9.1 | 0.096774 |
N | 418 | Q418X | Cag | Tag | 3 | 3 | B.40 | 0.001093 |
N | 418 | Q418del | CAG | --- | 3 | 3 | P.1 | 0.000047 |
N | 418 | Q418P | cAg | cCg | 3 | 3 | P.1 | 0.000047 |
N | 418 | Q418Q | caG | caA | 3 | 3 | P.1.1 | 0.000953 |
N | 418 | Q418H | caG | caT | 3 | 3 | P.1.15 | 0.000697 |
N | 418 | Q418H | caG | caT | 2 | 2 | A.23.1 | 0.001408 |
N | 418 | Q418del2 | CAG | --A | 1 | 2 | All | 0 |
N | 418 | Q418del2 | cAG | c-- | 1 | 2 | All | 0 |
N | 418 | Q418R | cAg | cGg | 2 | 2 | AY.101 | 0.000981 |
N | 418 | Q418L | cAg | cTg | 2 | 2 | AY.102 | 0.000053 |
N | 418 | Q418R | cAg | cGg | 2 | 2 | AY.103 | 0.000012 |
N | 418 | Q418H | caG | caT | 2 | 2 | AY.113 | 0.000285 |
N | 418 | Q418P | cAg | cCg | 2 | 2 | AY.117 | 0.000169 |
N | 418 | Q418Q | caG | caA | 2 | 2 | AY.119 | 0.000071 |
N | 418 | Q418H | caG | caT | 2 | 2 | AY.14 | 0.000176 |
N | 418 | Q418Q | caG | caA | 2 | 2 | AY.20 | 0.000078 |
N | 418 | Q418R | cAg | cGg | 2 | 2 | AY.23 | 0.000139 |
N | 418 | Q418L | cAg | cTg | 2 | 2 | AY.25 | 0.000012 |
N | 418 | Q418del | CAG | --- | 2 | 2 | AY.25 | 0.000012 |
N | 418 | Q418X | Cag | Tag | 2 | 2 | AY.26 | 0.000057 |
N | 418 | Q418X | Cag | Tag | 2 | 2 | AY.27 | 0.000129 |
N | 418 | Q418E | Cag | Gag | 2 | 2 | AY.29 | 0.000032 |
N | 418 | Q418H | caG | caT | 2 | 2 | AY.32 | 0.001065 |
N | 418 | Q418Q | caG | caA | 2 | 2 | AY.33 | 0.000134 |
N | 418 | Q418Q | caG | caA | 2 | 2 | AY.36 | 0.000296 |
N | 418 | Q418H | caG | caT | 2 | 2 | AY.37 | 0.000632 |
N | 418 | Q418del | CAG | --- | 2 | 2 | AY.4 | 0.000003 |
N | 418 | Q418K | Cag | Aag | 2 | 2 | AY.4 | 0.000003 |
N | 418 | Q418P | cAg | cCg | 2 | 2 | AY.4.2 | 0.000043 |
N | 418 | Q418X | Cag | Tag | 2 | 2 | AY.4.3 | 0.001684 |
N | 418 | Q418X | Cag | Tag | 2 | 2 | AY.4.5 | 0.000215 |
N | 418 | Q418del | CAG | --- | 2 | 2 | AY.44 | 0.000012 |
N | 418 | Q418H | caG | caT | 2 | 2 | AY.46.1 | 0.002053 |
N | 418 | Q418L | cAg | cTg | 2 | 2 | AY.5 | 0.000041 |
N | 418 | Q418H | caG | caT | 2 | 2 | AY.5.3 | 0.000675 |
N | 418 | Q418H | caG | caT | 2 | 2 | AY.5.4 | 0.000553 |
N | 418 | Q418H | caG | caT | 2 | 2 | AY.54 | 0.000191 |
N | 418 | Q418H | caG | caT | 2 | 2 | AY.68 | 0.000547 |
N | 418 | Q418K | Cag | Aag | 2 | 2 | AY.69 | 0.000373 |
N | 418 | Q418H | caG | caT | 2 | 2 | AY.9.1 | 0.000167 |
N | 418 | Q418X | Cag | Tag | 2 | 2 | AY.9.2 | 0.000073 |
N | 418 | Q418H | caG | caT | 2 | 2 | AY.92 | 0.000575 |
N | 418 | Q418P | cAg | cCg | 2 | 2 | AY.98.1 | 0.000097 |
N | 418 | Q418K | Cag | Aag | 2 | 2 | B.1 | 0.000018 |
N | 418 | Q418del | CAG | --- | 2 | 2 | B.1.1 | 0.000036 |
N | 418 | Q418L | cAg | cTg | 2 | 2 | B.1.1 | 0.000036 |
N | 418 | Q418H | caG | caT | 2 | 2 | B.1.1.1 | 0.000653 |
N | 418 | Q418H | caG | caT | 2 | 2 | B.1.1.198 | 0.002937 |
N | 418 | Q418H | caG | caT | 2 | 2 | B.1.1.25 | 0.001137 |
N | 418 | Q418H | caG | caT | 2 | 2 | B.1.1.28 | 0.000622 |
N | 418 | Q418H | caG | caT | 2 | 2 | B.1.1.291 | 0.001485 |
N | 418 | Q418H | caG | caT | 2 | 2 | B.1.1.305 | 0.007722 |
N | 418 | Q418H | caG | caT | 2 | 2 | B.1.1.306 | 0.000877 |
N | 418 | Q418Q | caG | caA | 2 | 2 | B.1.1.37 | 0.000386 |
N | 418 | Q418H | caG | caT | 2 | 2 | B.1.1.51 | 0.003436 |
N | 418 | Q418H | caG | caT | 2 | 2 | B.1.1.523 | 0.003125 |
N | 418 | Q418H | caG | caT | 2 | 2 | B.1.1.70 | 0.000682 |
N | 418 | Q418H | caG | caC | 2 | 2 | B.1.177.32 | 0.002699 |
N | 418 | Q418del1 | Cag | -ag | 2 | 2 | B.1.2 | 0.000018 |
N | 418 | Q418K | Cag | Aag | 2 | 2 | B.1.2 | 0.000018 |
N | 418 | Q418R | cAg | cGg | 2 | 2 | B.1.2 | 0.000018 |
N | 418 | Q418Q | caG | caA | 2 | 2 | B.1.234 | 0.000264 |
N | 418 | Q418Q | caG | caA | 2 | 2 | B.1.236 | 0.004107 |
N | 418 | Q418H | caG | caT | 2 | 2 | B.1.258 | 0.000133 |
N | 418 | Q418R | cAg | cGg | 2 | 2 | B.1.258 | 0.000133 |
N | 418 | Q418H | caG | caT | 2 | 2 | B.1.265 | 0.002541 |
N | 418 | Q418H | caG | caC | 2 | 2 | B.1.311 | 0.000549 |
N | 418 | Q418L | cAg | cTg | 2 | 2 | B.1.351 | 0.000059 |
N | 418 | Q418L | cAg | cTg | 2 | 2 | B.1.36 | 0.000292 |
N | 418 | Q418H | caG | caT | 2 | 2 | B.1.36.8 | 0.002 |
N | 418 | Q418H | caG | caT | 2 | 2 | B.1.396 | 0.001411 |
N | 418 | Q418X | Cag | Tag | 2 | 2 | B.1.427 | 0.000101 |
N | 418 | Q418Q | caG | caA | 2 | 2 | B.1.427 | 0.000101 |
N | 418 | Q418X | Cag | Tag | 2 | 2 | B.1.429 | 0.000047 |
N | 418 | Q418H | caG | caT | 2 | 2 | B.1.503 | 0.004975 |
N | 418 | Q418H | caG | caT | 2 | 2 | B.1.575.1 | 0.004878 |
N | 418 | Q418H | caG | caT | 2 | 2 | B.1.595 | 0.000522 |
N | 418 | Q418H | caG | caT | 2 | 2 | B.1.617.1 | 0.000258 |
N | 418 | Q418E | Cag | Gag | 2 | 2 | B.1.617.2 | 0.000008 |
N | 418 | Q418P | cAg | cCg | 2 | 2 | B.1.617.2 | 0.000008 |
N | 418 | Q418H | caG | caT | 2 | 2 | C.16 | 0.002121 |
N | 418 | Q418Q | caG | caA | 2 | 2 | C.37 | 0.000232 |
N | 418 | Q418H | caG | caT | 2 | 2 | L.3 | 0.007092 |
N | 418 | Q418Q | caG | caA | 2 | 2 | P.1.10 | 0.000539 |
N | 418 | Q418H | caG | caT | 2 | 2 | P.2 | 0.000373 |
N | 418 | Q418H | caG | caC | 2 | 2 | P.3 | 0.00319 |
N | 418 | Q418H | caG | caT | 2 | 2 | Q.3 | 0.00029 |
N | 418 | Q418H | caG | caT | 1 | 1 | A.2.4 | 0.003367 |
N | 418 | Q418L | cAg | cTg | 1 | 1 | A.2.5 | 0.000499 |
N | 418 | Q418H | caG | caT | 1 | 1 | AE.8 | 0.000489 |
N | 418 | Q418N | CaG | AaT | 1 | 1 | All | 0 |
N | 418 | Q418H | caG | caT | 1 | 1 | AM.4 | 0.003571 |
N | 418 | Q418H | caG | caT | 1 | 1 | AU.3 | 0.00211 |
N | 418 | Q418X | Cag | Tag | 1 | 1 | AY.100 | 0.000046 |
N | 418 | Q418D | CaG | GaC | 1 | 1 | AY.103 | 0.000006 |
N | 418 | Q418H | caG | caT | 1 | 1 | AY.104 | 0.001984 |
N | 418 | Q418E | Cag | Gag | 1 | 1 | AY.106 | 0.000335 |
N | 418 | Q418R | cAg | cGg | 1 | 1 | AY.106 | 0.000335 |
N | 418 | Q418L | cAg | cTg | 1 | 1 | AY.109 | 0.00074 |
N | 418 | Q418X | Cag | Tag | 1 | 1 | AY.113 | 0.000142 |
N | 418 | Q418P | cAg | cCg | 1 | 1 | AY.113 | 0.000142 |
N | 418 | Q418del | CAG | --- | 1 | 1 | AY.114 | 0.000231 |
N | 418 | Q418R | cAg | cGg | 1 | 1 | AY.116 | 0.000287 |
N | 418 | Q418H | caG | caT | 1 | 1 | AY.116 | 0.000287 |
N | 418 | Q418Q | caG | caA | 1 | 1 | AY.117 | 0.000085 |
N | 418 | Q418H | caG | caT | 1 | 1 | AY.118 | 0.000063 |
N | 418 | Q418L | cAg | cTg | 1 | 1 | AY.120 | 0.000037 |
N | 418 | Q418Q | caG | caA | 1 | 1 | AY.120 | 0.000037 |
N | 418 | Q418X | Cag | Tag | 1 | 1 | AY.120 | 0.000037 |
N | 418 | Q418Q | caG | caA | 1 | 1 | AY.121 | 0.000135 |
N | 418 | Q418P | cAg | cCg | 1 | 1 | AY.121 | 0.000135 |
N | 418 | Q418del | CAG | --- | 1 | 1 | AY.13 | 0.000161 |
N | 418 | Q418Q | caG | caA | 1 | 1 | AY.14 | 0.000088 |
N | 418 | Q418H | caG | caT | 1 | 1 | AY.15 | 0.002222 |
N | 418 | Q418H | caG | caT | 1 | 1 | AY.19 | 0.00114 |
N | 418 | Q418P | cAg | cCg | 1 | 1 | AY.20 | 0.000039 |
N | 418 | Q418X | Cag | Tag | 1 | 1 | AY.20 | 0.000039 |
N | 418 | Q418P | cAg | cCg | 1 | 1 | AY.21 | 0.001898 |
N | 418 | Q418L | cAg | cTg | 1 | 1 | AY.23 | 0.00007 |
N | 418 | Q418K | Cag | Aag | 1 | 1 | AY.25 | 0.000006 |
N | 418 | Q418Y | CaG | TaC | 1 | 1 | AY.25 | 0.000006 |
N | 418 | Q418R | cAg | cGg | 1 | 1 | AY.25 | 0.000006 |
N | 418 | Q418R | cAg | cGg | 1 | 1 | AY.26 | 0.000028 |
N | 418 | Q418L | cAg | cTg | 1 | 1 | AY.26 | 0.000028 |
N | 418 | Q418del | CAG | --- | 1 | 1 | AY.26 | 0.000028 |
N | 418 | Q418del1 | caG | ca- | 1 | 1 | AY.29 | 0.000016 |
N | 418 | Q418X | Cag | Tag | 1 | 1 | AY.29 | 0.000016 |
N | 418 | Q418Q | caG | caA | 1 | 1 | AY.29 | 0.000016 |
N | 418 | Q418N | CaG | AaT | 1 | 1 | AY.3 | 0.00001 |
N | 418 | Q418H | caG | caT | 1 | 1 | AY.3.1 | 0.000085 |
N | 418 | Q418H | caG | caT | 1 | 1 | AY.30 | 0.000396 |
N | 418 | Q418L | cAg | cTg | 1 | 1 | AY.33 | 0.000067 |
N | 418 | Q418Q | caG | caA | 1 | 1 | AY.34 | 0.000097 |
N | 418 | Q418H | caG | caT | 1 | 1 | AY.34.1 | 0.00051 |
N | 418 | Q418R | cAg | cGg | 1 | 1 | AY.35 | 0.000233 |
N | 418 | Q418H | caG | caT | 1 | 1 | AY.36 | 0.000148 |
N | 418 | Q418del2 | cAG | c-- | 1 | 1 | AY.36 | 0.000148 |
N | 418 | Q418K | Cag | Aag | 1 | 1 | AY.39 | 0.000025 |
N | 418 | Q418E | Cag | Gag | 1 | 1 | AY.4 | 0.000002 |
N | 418 | Q418H | caG | caT | 1 | 1 | AY.4.3 | 0.000842 |
N | 418 | Q418X | Cag | Tag | 1 | 1 | AY.4.4 | 0.000409 |
N | 418 | Q418Q | caG | caA | 1 | 1 | AY.4.5 | 0.000107 |
N | 418 | Q418P | cAg | cCg | 1 | 1 | AY.41 | 0.000294 |
N | 418 | Q418H | caG | caT | 1 | 1 | AY.41 | 0.000294 |
N | 418 | Q418R | cAg | cGg | 1 | 1 | AY.42 | 0.00004 |
N | 418 | Q418R | cAg | cGg | 1 | 1 | AY.43 | 0.000004 |
N | 418 | Q418K | Cag | Aag | 1 | 1 | AY.43 | 0.000004 |
N | 418 | Q418E | Cag | Gag | 1 | 1 | AY.43 | 0.000004 |
N | 418 | Q418del | CAG | --- | 1 | 1 | AY.43 | 0.000004 |
N | 418 | Q418R | cAg | cGg | 1 | 1 | AY.44 | 0.000006 |
N | 418 | Q418L | cAg | cTg | 1 | 1 | AY.45 | 0.000122 |
N | 418 | Q418E | Cag | Gag | 1 | 1 | AY.45 | 0.000122 |
N | 418 | Q418L | cAg | cTg | 1 | 1 | AY.46 | 0.000104 |
N | 418 | Q418H | caG | caT | 1 | 1 | AY.46.3 | 0.000934 |
N | 418 | Q418R | cAg | cGg | 1 | 1 | AY.46.6 | 0.000072 |
N | 418 | Q418H | caG | caT | 1 | 1 | AY.46.6 | 0.000072 |
N | 418 | Q418del | CAG | --- | 1 | 1 | AY.47 | 0.000031 |
N | 418 | Q418Q | caG | caA | 1 | 1 | AY.47 | 0.000031 |
N | 418 | Q418del | CAG | --- | 1 | 1 | AY.5 | 0.000021 |
N | 418 | Q418E | Cag | Gag | 1 | 1 | AY.5 | 0.000021 |
N | 418 | Q418X | Cag | Tag | 1 | 1 | AY.5 | 0.000021 |
N | 418 | Q418Q | caG | caA | 1 | 1 | AY.5.4 | 0.000277 |
N | 418 | Q418X | Cag | Tag | 1 | 1 | AY.53 | 0.000288 |
N | 418 | Q418Q | caG | caA | 1 | 1 | AY.54 | 0.000095 |
N | 418 | Q418P | cAg | cCg | 1 | 1 | AY.54 | 0.000095 |
N | 418 | Q418del | CAG | --- | 1 | 1 | AY.62 | 0.000436 |
N | 418 | Q418H | caG | caT | 1 | 1 | AY.64 | 0.000595 |
N | 418 | Q418H | caG | caT | 1 | 1 | AY.7 | 0.000196 |
N | 418 | Q418H | caG | caC | 1 | 1 | AY.74 | 0.000116 |
N | 418 | Q418E | Cag | Gag | 1 | 1 | AY.75 | 0.000056 |
N | 418 | Q418Q | caG | caA | 1 | 1 | AY.75 | 0.000056 |
N | 418 | Q418X | Cag | Tag | 1 | 1 | AY.75 | 0.000056 |
N | 418 | Q418L | cAg | cTg | 1 | 1 | AY.75.1 | 0.00018 |
N | 418 | Q418X | Cag | Tag | 1 | 1 | AY.8 | 0.000606 |
N | 418 | Q418H | caG | caT | 1 | 1 | AY.82 | 0.001357 |
N | 418 | Q418H | caG | caT | 1 | 1 | AY.83 | 0.001724 |
N | 418 | Q418X | Cag | Tag | 1 | 1 | AY.84 | 0.000437 |
N | 418 | Q418Q | caG | caA | 1 | 1 | AY.88 | 0.000884 |
N | 418 | Q418H | caG | caT | 1 | 1 | AY.9 | 0.000068 |
N | 418 | Q418X | Cag | Tag | 1 | 1 | AY.9 | 0.000068 |
N | 418 | Q418del | CAG | --- | 1 | 1 | AY.9.1 | 0.000084 |
N | 418 | Q418Q | caG | caA | 1 | 1 | AY.9.1 | 0.000084 |
N | 418 | Q418Q | caG | caA | 1 | 1 | AY.9.2 | 0.000037 |
N | 418 | Q418L | cAg | cTg | 1 | 1 | AY.98 | 0.000079 |
N | 418 | Q418L | cAg | cTg | 1 | 1 | AY.98.1 | 0.000048 |
N | 418 | Q418L | cAg | cTg | 1 | 1 | AY.99 | 0.001049 |
N | 418 | Q418del1 | caG | ca- | 1 | 1 | AY.99 | 0.001049 |
N | 418 | Q418L | cAg | cTg | 1 | 1 | AY.99.2 | 0.000092 |
N | 418 | Q418X | Cag | Tag | 1 | 1 | AZ.2 | 0.000821 |
N | 418 | Q418del1 | Cag | -ag | 1 | 1 | B.1 | 0.000009 |
N | 418 | Q418del2 | CAG | --A | 1 | 1 | B.1 | 0.000009 |
N | 418 | Q418Y | CaG | TaT | 1 | 1 | B.1.1 | 0.000018 |
N | 418 | Q418K | Cag | Aag | 1 | 1 | B.1.1 | 0.000018 |
N | 418 | Q418L | cAg | cTg | 1 | 1 | B.1.1.1 | 0.000327 |
N | 418 | Q418H | caG | caC | 1 | 1 | B.1.1.163 | 0.007634 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.1.196 | 0.005714 |
N | 418 | Q418D | CaG | GaC | 1 | 1 | B.1.1.202 | 0.076923 |
N | 418 | Q418R | cAg | cGg | 1 | 1 | B.1.1.214 | 0.000055 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.1.221 | 0.010101 |
N | 418 | Q418R | cAg | cGg | 1 | 1 | B.1.1.222 | 0.000204 |
N | 418 | Q418Q | caG | caA | 1 | 1 | B.1.1.222 | 0.000204 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.1.232 | 0.001815 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.1.236 | 0.006897 |
N | 418 | Q418L | cAg | cTg | 1 | 1 | B.1.1.25 | 0.000569 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.1.261 | 0.008621 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.1.263 | 0.001558 |
N | 418 | Q418Q | caG | caA | 1 | 1 | B.1.1.265 | 0.003155 |
N | 418 | Q418X | CaG | TaA | 1 | 1 | B.1.1.27 | 0.00565 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.1.277 | 0.000759 |
N | 418 | Q418X | Cag | Tag | 1 | 1 | B.1.1.279 | 0.001121 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.1.284 | 0.000107 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.1.300 | 0.010753 |
N | 418 | Q418X | Cag | Tag | 1 | 1 | B.1.1.311 | 0.000358 |
N | 418 | Q418X | Cag | Tag | 1 | 1 | B.1.1.323 | 0.014085 |
N | 418 | Q418Q | caG | caA | 1 | 1 | B.1.1.326 | 0.001761 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.1.33 | 0.000421 |
N | 418 | Q418del | CAG | --- | 1 | 1 | B.1.1.37 | 0.000193 |
N | 418 | Q418L | cAg | cTg | 1 | 1 | B.1.1.376 | 0.005952 |
N | 418 | Q418L | cAg | cTg | 1 | 1 | B.1.1.389 | 0.006061 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.1.416 | 0.000905 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.1.419 | 0.007407 |
N | 418 | Q418R | cAg | cGg | 1 | 1 | B.1.1.426 | 0.035714 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.1.46 | 0.004367 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.1.464 | 0.001473 |
N | 418 | Q418R | cAg | cGg | 1 | 1 | B.1.1.50 | 0.000679 |
N | 418 | Q418Q | caG | caA | 1 | 1 | B.1.1.518 | 0.006329 |
N | 418 | Q418X | Cag | Tag | 1 | 1 | B.1.1.519 | 0.00004 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.1.522 | 0.017241 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.1.526 | 0.003546 |
N | 418 | Q418L | cAg | cTg | 1 | 1 | B.1.1.70 | 0.000341 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.1.8 | 0.003584 |
N | 418 | Q418del1 | caG | ca- | 1 | 1 | B.1.118 | 0.006711 |
N | 418 | Q418X | Cag | Tag | 1 | 1 | B.1.160.29 | 0.004219 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.161 | 0.017241 |
N | 418 | Q418E | Cag | Gag | 1 | 1 | B.1.177 | 0.000013 |
N | 418 | Q418X | Cag | Tag | 1 | 1 | B.1.177.21 | 0.000076 |
N | 418 | Q418K | Cag | Aag | 1 | 1 | B.1.177.35 | 0.000691 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.177.4 | 0.000211 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.177.56 | 0.000668 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.177.57 | 0.000281 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.177.60 | 0.000218 |
N | 418 | Q418L | cAG | cTA | 1 | 1 | B.1.177.63 | 0.002703 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.177.65 | 0.000665 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.177.75 | 0.001041 |
N | 418 | Q418Q | caG | caA | 1 | 1 | B.1.177.75 | 0.001041 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.177.81 | 0.000189 |
N | 418 | Q418Q | caG | caA | 1 | 1 | B.1.177.81 | 0.000189 |
N | 418 | Q418H | caG | caC | 1 | 1 | B.1.177.83 | 0.001481 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.177.84 | 0.006667 |
N | 418 | Q418X | Cag | Tag | 1 | 1 | B.1.177.85 | 0.005435 |
N | 418 | Q418R | cAg | cGg | 1 | 1 | B.1.177.86 | 0.000183 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.177.86 | 0.000183 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.195 | 0.005025 |
N | 418 | Q418del | CAG | --- | 1 | 1 | B.1.2 | 0.000009 |
N | 418 | Q418P | cAg | cCg | 1 | 1 | B.1.2 | 0.000009 |
N | 418 | Q418E | Cag | Gag | 1 | 1 | B.1.2 | 0.000009 |
N | 418 | Q418H | caG | caC | 1 | 1 | B.1.22 | 0.001318 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.221 | 0.000071 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.234 | 0.000132 |
N | 418 | Q418X | Cag | Tag | 1 | 1 | B.1.234 | 0.000132 |
N | 418 | Q418X | Cag | Tag | 1 | 1 | B.1.243 | 0.00007 |
N | 418 | Q418Q | caG | caA | 1 | 1 | B.1.243 | 0.00007 |
N | 418 | Q418X | Cag | Tag | 1 | 1 | B.1.254 | 0.025 |
N | 418 | Q418del1 | caG | ca- | 1 | 1 | B.1.258 | 0.000067 |
N | 418 | Q418X | Cag | Tag | 1 | 1 | B.1.258 | 0.000067 |
N | 418 | Q418del | CAG | --- | 1 | 1 | B.1.258.16 | 0.001637 |
N | 418 | Q418Q | caG | caA | 1 | 1 | B.1.258.17 | 0.000104 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.260 | 0.003344 |
N | 418 | Q418X | Cag | Tag | 1 | 1 | B.1.279 | 0.000514 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.298 | 0.002114 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.324 | 0.001605 |
N | 418 | Q418H | caG | caC | 1 | 1 | B.1.338 | 0.008621 |
N | 418 | Q418X | Cag | Tag | 1 | 1 | B.1.351 | 0.00003 |
N | 418 | Q418D | CaG | GaC | 1 | 1 | B.1.351 | 0.00003 |
N | 418 | Q418R | cAg | cGg | 1 | 1 | B.1.351 | 0.00003 |
N | 418 | Q418Q | caG | caA | 1 | 1 | B.1.351.2 | 0.000303 |
N | 418 | Q418H | caG | caC | 1 | 1 | B.1.36.1 | 0.00114 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.36.10 | 0.004785 |
N | 418 | Q418R | cAg | cGg | 1 | 1 | B.1.36.16 | 0.001425 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.36.18 | 0.00042 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.36.29 | 0.000517 |
N | 418 | Q418X | Cag | Tag | 1 | 1 | B.1.36.38 | 0.001642 |
N | 418 | Q418L | cAg | cTg | 1 | 1 | B.1.36.8 | 0.001 |
N | 418 | Q418X | Cag | Tag | 1 | 1 | B.1.369 | 0.000285 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.369 | 0.000285 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.389 | 0.001002 |
N | 418 | Q418X | Cag | Tag | 1 | 1 | B.1.396 | 0.000706 |
N | 418 | Q418R | cAg | cGg | 1 | 1 | B.1.403 | 0.003268 |
N | 418 | Q418del | CAG | --- | 1 | 1 | B.1.415 | 0.014286 |
N | 418 | Q418D | CaG | GaC | 1 | 1 | B.1.416 | 0.001269 |
N | 418 | Q418del | CAG | --- | 1 | 1 | B.1.427 | 0.00005 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.427 | 0.00005 |
N | 418 | Q418R | cAg | cGg | 1 | 1 | B.1.427 | 0.00005 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.428 | 0.00102 |
N | 418 | Q418Q | caG | caA | 1 | 1 | B.1.429 | 0.000024 |
N | 418 | Q418del | CAG | --- | 1 | 1 | B.1.438.1 | 0.000107 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.468 | 0.005714 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.470 | 0.001404 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.524 | 0.001406 |
N | 418 | Q418L | cAG | cTA | 1 | 1 | B.1.524 | 0.001406 |
N | 418 | Q418P | cAg | cCg | 1 | 1 | B.1.526 | 0.000024 |
N | 418 | Q418Q | caG | caA | 1 | 1 | B.1.538 | 0.008065 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.561 | 0.000397 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.568 | 0.001111 |
N | 418 | Q418del1 | Cag | -ag | 1 | 1 | B.1.577 | 0.000687 |
N | 418 | Q418del1 | caG | ca- | 1 | 1 | B.1.588 | 0.00091 |
N | 418 | Q418Q | caG | caA | 1 | 1 | B.1.591 | 0.010638 |
N | 418 | Q418del | CAG | --- | 1 | 1 | B.1.596 | 0.000087 |
N | 418 | Q418X | Cag | Tag | 1 | 1 | B.1.596 | 0.000087 |
N | 418 | Q418Q | caG | caA | 1 | 1 | B.1.596 | 0.000087 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.606 | 0.006024 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.609 | 0.000479 |
N | 418 | Q418X | Cag | Tag | 1 | 1 | B.1.617.1 | 0.000129 |
N | 418 | Q418del | CAG | --- | 1 | 1 | B.1.617.1 | 0.000129 |
N | 418 | Q418E | Cag | Gag | 1 | 1 | B.1.619 | 0.000871 |
N | 418 | Q418X | Cag | Tag | 1 | 1 | B.1.621 | 0.000089 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.1.628 | 0.000352 |
N | 418 | Q418X | Cag | Tag | 1 | 1 | B.1.76 | 0.011364 |
N | 418 | Q418X | Cag | Tag | 1 | 1 | B.1.93 | 0.000934 |
N | 418 | Q418H | caG | caT | 1 | 1 | B.11 | 0.005128 |
N | 418 | Q418del1 | Cag | -ag | 1 | 1 | B.40 | 0.000364 |
N | 418 | Q418H | caG | caT | 1 | 1 | C.1 | 0.002392 |
N | 418 | Q418X | Cag | Tag | 1 | 1 | C.29 | 0.0625 |
N | 418 | Q418X | Cag | Tag | 1 | 1 | C.35 | 0.000774 |
N | 418 | Q418H | caG | caT | 1 | 1 | C.36 | 0.000911 |
N | 418 | Q418X | Cag | Tag | 1 | 1 | C.36 | 0.000911 |
N | 418 | Q418L | cAg | cTg | 1 | 1 | C.36.3.1 | 0.002717 |
N | 418 | Q418H | caG | caT | 1 | 1 | D.2 | 0.000075 |
N | 418 | Q418Q | caG | caA | 1 | 1 | D.2 | 0.000075 |
N | 418 | Q418del1 | Cag | -ag | 1 | 1 | D.2 | 0.000075 |
N | 418 | Q418X | Cag | Tag | 1 | 1 | N.5 | 0.001767 |
N | 418 | Q418R | cAg | cGg | 1 | 1 | P.1 | 0.000016 |
N | 418 | Q418H | caG | caT | 1 | 1 | P.1.12 | 0.000484 |
N | 418 | Q418Q | caG | caA | 1 | 1 | P.1.16 | 0.000374 |
N | 418 | Q418L | cAg | cTg | 1 | 1 | P.1.6 | 0.001946 |
N | 418 | Q418R | cAg | cGg | 1 | 1 | P.1.7 | 0.000319 |
N | 418 | Q418X | Cag | Tag | 1 | 1 | P.1.7 | 0.000319 |
N | 418 | Q418H | caG | caT | 1 | 1 | Q.1 | 0.000126 |
N | 418 | Q418L | cAg | cTg | 1 | 1 | Q.1 | 0.000126 |
N | 418 | Q418Y | CaG | TaT | 1 | 1 | R.1 | 0.00009 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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