CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : CodonNum = 40 & Codon = cAt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N40R40HnonsyncGtcAt934934128391-28393

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N40R40HcGtcAt934934All0.000179
N40R40HcGtcAt187187B.1.617.20.000704
N40R40HcGtcAt132132B.1.2210.009376
N40R40HcGtcAt116116AY.440.000706
N40R40HcGtcAt5151AY.710.024228
N40R40HcGtcAt5050AY.40.000078
N40R40HcGtcAt4545AY.330.003005
N40R40HcGtcAt2525AY.30.000249
N40R40HcGtcAt2424AY.250.000144
N40R40HcGtcAt2424B.1.1.70.000021
N40R40HcGtcAt2121P.10.000331
N40R40HcGtcAt1717AY.230.001186
N40R40HcGtcAt1515AY.430.000066
N40R40HcGtcAt1414AY.1030.000087
N40R40HcGtcAt1111AY.320.005857
N40R40HcGtcAt1111B.1.10.0002
N40R40HcGtcAt1010AY.9.10.000837
N40R40HcGtcAt1010B.1.20.000088
N40R40HcGtcAt1010B.1.214.30.071429
N40R40HcGtcAt99AY.140.000792
N40R40HcGtcAt99AY.390.000222
N40R40HcGtcAt88B.1.2580.000532
N40R40HcGtcAt66AY.1190.000212
N40R40HcGtcAt66AY.260.00017
N40R40HcGtcAt66B.10.000055
N40R40HcGtcAt66B.1.1.2970.013423
N40R40HcGtcAt44AY.1000.000184
N40R40HcGtcAt44AY.470.000124
N40R40HcGtcAt44AY.75.10.000721
N40R40HcGtcAt44AY.900.002738
N40R40HcGtcAt33AY.1020.00008
N40R40HcGtcAt33AY.50.000062
N40R40HcGtcAt33AY.60.000123
N40R40HcGtcAt33B.1.3510.000089
N40R40HcGtcAt33B.1.6370.000219
N40R40HcGtcAt22AY.100.00106
N40R40HcGtcAt22AY.200.000078
N40R40HcGtcAt22AY.23.10.000835
N40R40HcGtcAt22AY.3.10.000171
N40R40HcGtcAt22AY.340.000194
N40R40HcGtcAt22AY.4.50.000215
N40R40HcGtcAt22AY.450.000243
N40R40HcGtcAt22AY.46.40.000329
N40R40HcGtcAt22AY.920.000575
N40R40HcGtcAt22AY.98.10.000097
N40R40HcGtcAt22B.1.1.330.000842
N40R40HcGtcAt22B.1.1770.000026
N40R40HcGtcAt22B.1.36.360.001204
N40R40HcGtcAt22B.1.36.80.002
N40R40HcGtcAt22B.1.4270.000101
N40R40HcGtcAt22B.1.438.10.000215
N40R40HcGtcAt22B.1.5260.000047
N40R40HcGtcAt22B.1.5960.000174
N40R40HcGtcAt22C.370.000232
N40R40HcGtcAt110.055556
N40R40HcGtcAt11A.20.000662
N40R40HcGtcAt11AY.10.000396
N40R40HcGtcAt11AY.1050.000643
N40R40HcGtcAt11AY.1100.000113
N40R40HcGtcAt11AY.1160.000287
N40R40HcGtcAt11AY.1180.000063
N40R40HcGtcAt11AY.120.000316
N40R40HcGtcAt11AY.1200.000037
N40R40HcGtcAt11AY.130.000161
N40R40HcGtcAt11AY.300.000396
N40R40HcGtcAt11AY.370.000316
N40R40HcGtcAt11AY.420.00004
N40R40HcGtcAt11AY.590.00053
N40R40HcGtcAt11AY.750.000056
N40R40HcGtcAt11AY.770.001127
N40R40HcGtcAt11AY.870.000833
N40R40HcGtcAt11AY.9.20.000037
N40R40HcGtcAt11AY.99.10.001553
N40R40HcGtcAt11B0.000128
N40R40HcGtcAt11B.1.1.1760.000439
N40R40HcGtcAt11B.1.1.2140.000055
N40R40HcGtcAt11B.1.1.2220.000204
N40R40HcGtcAt11B.1.1.5190.00004
N40R40HcGtcAt11B.1.1600.000031
N40R40HcGtcAt11B.1.160.100.008065
N40R40HcGtcAt11B.1.177.580.001332
N40R40HcGtcAt11B.1.258.170.000104
N40R40HcGtcAt11B.1.36.170.000494
N40R40HcGtcAt11B.1.36.290.000517
N40R40HcGtcAt11B.1.3610.001289
N40R40HcGtcAt11B.1.4000.000429
N40R40HcGtcAt11B.1.575.10.002439
N40R40HcGtcAt11B.1.5950.000261
N40R40HcGtcAt11B.1.6210.000089
N40R40HcGtcAt11B.1.621.10.000506
N40R40HcGtcAt11C.310.017857
N40R40HcGtcAt11N.50.001767
N40R40HcGtcAt11P.1.140.000048
N40R40HcGtcAt11P.1.150.000232
N40R40HcGtcAt11P.1.70.000319
N40R40HcGtcAt11P.50.013699