CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
N | 371 | D371D | syn | gaC | gaT | 18057 | 18057 | 1 | 29384-29386 | |
N | 371 | D371Y | nonsyn | Gac | Tac | 3487 | 3478 | 0.997419 | 29384-29386 | |
N | 371 | D371Y | nonsyn | GaC | TaT | 3487 | 9 | 0.00258102 | 29384-29386 | |
N | 371 | D371E | nonsyn | gaC | gaA | 809 | 800 | 0.988875 | 29384-29386 | |
N | 371 | D371E | nonsyn | gaC | gaG | 809 | 9 | 0.0111248 | 29384-29386 | |
N | 371 | D371N | nonsyn | Gac | Aac | 290 | 288 | 0.993103 | 29384-29386 | |
N | 371 | D371N | nonsyn | GaC | AaT | 290 | 2 | 0.00689655 | 29384-29386 | |
N | 371 | D371del | del | GAC | --- | 113 | 113 | 1 | 29384-29386 | |
N | 371 | D371G | nonsyn | gAc | gGc | 110 | 108 | 0.981818 | 29384-29386 | |
N | 371 | D371G | nonsyn | gAC | gGA | 110 | 1 | 0.00909091 | 29384-29386 | |
N | 371 | D371G | nonsyn | gAC | gGG | 110 | 1 | 0.00909091 | 29384-29386 | |
N | 371 | D371V | nonsyn | gAc | gTc | 109 | 102 | 0.93578 | 29384-29386 | |
N | 371 | D371V | nonsyn | gAC | gTA | 109 | 3 | 0.0275229 | 29384-29386 | |
N | 371 | D371V | nonsyn | gAC | gTT | 109 | 3 | 0.0275229 | 29384-29386 | |
N | 371 | D371V | nonsyn | gAC | gTG | 109 | 1 | 0.00917431 | 29384-29386 | |
N | 371 | D371A | nonsyn | gAc | gCc | 22 | 22 | 1 | 29384-29386 | |
N | 371 | D371H | nonsyn | Gac | Cac | 14 | 14 | 1 | 29384-29386 | |
N | 371 | D371K | nonsyn | GaC | AaA | 13 | 11 | 0.846154 | 29384-29386 | |
N | 371 | D371del1 | del | gaC | ga- | 13 | 9 | 0.692308 | 29384-29386 | |
N | 371 | D371K | nonsyn | GaC | AaG | 13 | 2 | 0.153846 | 29384-29386 | |
N | 371 | D371del1 | del | GaC | Ca- | 13 | 1 | 0.0769231 | 29384-29386 | |
N | 371 | D371del1 | del | GAc | -Cc | 13 | 1 | 0.0769231 | 29384-29386 | |
N | 371 | D371del1 | del | gAc | g-c | 13 | 1 | 0.0769231 | 29384-29386 | |
N | 371 | D371del1 | del | GAC | -NN | 13 | 1 | 0.0769231 | 29384-29386 | |
N | 371 | D371del2 | del | GAC | A-- | 9 | 5 | 0.555556 | 29384-29386 | |
N | 371 | D371del2 | del | gAC | g-- | 9 | 4 | 0.444444 | 29384-29386 | |
N | 371 | D371L | nonsyn | GAC | CTG | 6 | 4 | 0.666667 | 29384-29386 | |
N | 371 | D371L | nonsyn | GAC | TTG | 6 | 1 | 0.166667 | 29384-29386 | |
N | 371 | D371L | nonsyn | GAC | TTA | 6 | 1 | 0.166667 | 29384-29386 | |
N | 371 | D371T | nonsyn | GAC | ACA | 4 | 3 | 0.75 | 29384-29386 | |
N | 371 | D371S | nonsyn | GAc | AGc | 4 | 2 | 0.5 | 29384-29386 | |
N | 371 | D371I | nonsyn | GAC | ATA | 4 | 2 | 0.5 | 29384-29386 | |
N | 371 | D371I | nonsyn | GAC | ATT | 4 | 2 | 0.5 | 29384-29386 | |
N | 371 | D371S | nonsyn | GAc | TCc | 4 | 2 | 0.5 | 29384-29386 | |
N | 371 | D371T | nonsyn | GAc | ACc | 4 | 1 | 0.25 | 29384-29386 | |
N | 371 | D371C | nonsyn | GAc | TGc | 2 | 2 | 1 | 29384-29386 | |
N | 371 | D371F | nonsyn | GAc | TTc | 2 | 2 | 1 | 29384-29386 | |
N | 371 | D371R | nonsyn | GAC | AGG | 2 | 1 | 0.5 | 29384-29386 | |
N | 371 | D371R | nonsyn | GAC | AGA | 2 | 1 | 0.5 | 29384-29386 | |
N | 371 | D371P | nonsyn | GAC | CCA | 2 | 1 | 0.5 | 29384-29386 | |
N | 371 | D371P | nonsyn | GAc | CCc | 2 | 1 | 0.5 | 29384-29386 | |
N | 371 | D371Q | nonsyn | GaC | CaA | 1 | 1 | 1 | 29384-29386 | |
N | 371 | D371M | nonsyn | GAC | ATG | 1 | 1 | 1 | 29384-29386 | |
N | 371 | D371X | nonsyn | GaC | TaA | 1 | 1 | 1 | 29384-29386 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
N | 371 | D371D | gaC | gaT | 18057 | 18057 | All | 0.003454 |
N | 371 | D371D | gaC | gaT | 6496 | 6496 | B.1.177.12 | 0.985437 |
N | 371 | D371D | gaC | gaT | 4550 | 4550 | B.1.177 | 0.059913 |
N | 371 | D371Y | Gac | Tac | 3478 | 3487 | All | 0.000665 |
N | 371 | D371Y | GaC | TaT | 9 | 3487 | All | 0.000002 |
N | 371 | D371Y | Gac | Tac | 3023 | 3032 | B.1.234 | 0.398865 |
N | 371 | D371Y | GaC | TaT | 9 | 3032 | B.1.234 | 0.001187 |
N | 371 | D371D | gaC | gaT | 1730 | 1730 | B.1.177.44 | 0.897769 |
N | 371 | D371D | gaC | gaT | 1364 | 1364 | B.1.177.35 | 0.94264 |
N | 371 | D371D | gaC | gaT | 1074 | 1074 | B.1.177.42 | 0.960644 |
N | 371 | D371E | gaC | gaA | 800 | 809 | All | 0.000153 |
N | 371 | D371E | gaC | gaG | 9 | 809 | All | 0.000002 |
N | 371 | D371D | gaC | gaT | 618 | 618 | B.1.177.43 | 0.912851 |
N | 371 | D371D | gaC | gaT | 391 | 391 | B.1.177.41 | 0.9775 |
N | 371 | D371N | Gac | Aac | 288 | 290 | All | 0.000055 |
N | 371 | D371N | GaC | AaT | 2 | 290 | All | 0 |
N | 371 | D371E | gaC | gaA | 256 | 257 | B.1.1.7 | 0.000229 |
N | 371 | D371E | gaC | gaG | 1 | 257 | B.1.1.7 | 0.000001 |
N | 371 | D371D | gaC | gaT | 192 | 192 | B.1.1.7 | 0.000172 |
N | 371 | D371D | gaC | gaT | 181 | 181 | B.1.177.85 | 0.983696 |
N | 371 | D371D | gaC | gaT | 178 | 178 | AY.5 | 0.003676 |
N | 371 | D371D | gaC | gaT | 178 | 178 | B.1.177.40 | 0.917526 |
N | 371 | D371Y | Gac | Tac | 141 | 141 | B.1.2 | 0.001242 |
N | 371 | D371E | gaC | gaA | 121 | 121 | AY.4 | 0.000188 |
N | 371 | D371D | gaC | gaT | 114 | 114 | B.1 | 0.001044 |
N | 371 | D371del | GAC | --- | 113 | 113 | All | 0.000022 |
N | 371 | D371Y | Gac | Tac | 113 | 113 | B.1 | 0.001035 |
N | 371 | D371G | gAc | gGc | 108 | 110 | All | 0.000021 |
N | 371 | D371G | gAC | gGA | 1 | 110 | All | 0 |
N | 371 | D371G | gAC | gGG | 1 | 110 | All | 0 |
N | 371 | D371V | gAc | gTc | 102 | 109 | All | 0.00002 |
N | 371 | D371V | gAC | gTA | 3 | 109 | All | 0.000001 |
N | 371 | D371V | gAC | gTT | 3 | 109 | All | 0.000001 |
N | 371 | D371V | gAC | gTG | 1 | 109 | All | 0 |
N | 371 | D371D | gaC | gaT | 92 | 92 | B.1.177.38 | 0.958333 |
N | 371 | D371E | gaC | gaA | 85 | 85 | AY.35 | 0.019809 |
N | 371 | D371N | Gac | Aac | 81 | 81 | B.1.177.48 | 0.253125 |
N | 371 | D371D | gaC | gaT | 74 | 74 | AY.103 | 0.000459 |
N | 371 | D371V | gAc | gTc | 72 | 72 | B.1.1.101 | 0.72 |
N | 371 | D371D | gaC | gaT | 62 | 62 | B.1.177.39 | 0.953846 |
N | 371 | D371D | gaC | gaT | 60 | 60 | B.1.177.36 | 0.967742 |
N | 371 | D371D | gaC | gaT | 48 | 48 | B.1.160 | 0.001497 |
N | 371 | D371D | gaC | gaT | 46 | 46 | B.1.160.30 | 0.136905 |
N | 371 | D371G | gAc | gGc | 45 | 45 | B.1.391 | 0.050733 |
N | 371 | D371D | gaC | gaT | 44 | 44 | AY.4 | 0.000068 |
N | 371 | D371N | Gac | Aac | 44 | 44 | Q.1 | 0.005558 |
N | 371 | D371D | gaC | gaT | 41 | 41 | B.1.221 | 0.002912 |
N | 371 | D371D | gaC | gaT | 39 | 39 | AY.25 | 0.000235 |
N | 371 | D371E | gaC | gaA | 38 | 38 | B.1.2 | 0.000335 |
N | 371 | D371D | gaC | gaT | 37 | 37 | B.1.617.2 | 0.000139 |
N | 371 | D371E | gaC | gaA | 36 | 36 | AY.44 | 0.000219 |
N | 371 | D371D | gaC | gaT | 33 | 33 | B.1.177.37 | 0.891892 |
N | 371 | D371N | Gac | Aac | 30 | 32 | B.1.1.7 | 0.000027 |
N | 371 | D371N | GaC | AaT | 2 | 32 | B.1.1.7 | 0.000002 |
N | 371 | D371Y | Gac | Tac | 27 | 27 | B.1.1 | 0.00049 |
N | 371 | D371E | gaC | gaA | 22 | 24 | B.1.617.2 | 0.000083 |
N | 371 | D371E | gaC | gaG | 2 | 24 | B.1.617.2 | 0.000008 |
N | 371 | D371G | gAc | gGc | 23 | 23 | B.1.234 | 0.003035 |
N | 371 | D371A | gAc | gCc | 22 | 22 | All | 0.000004 |
N | 371 | D371E | gaC | gaA | 22 | 22 | AY.4.2 | 0.000477 |
N | 371 | D371N | Gac | Aac | 22 | 22 | AY.4.2 | 0.000477 |
N | 371 | D371D | gaC | gaT | 22 | 22 | B.1.36 | 0.00321 |
N | 371 | D371D | gaC | gaT | 21 | 21 | AY.43 | 0.000093 |
N | 371 | D371G | gAc | gGc | 21 | 21 | B.1.2 | 0.000185 |
N | 371 | D371D | gaC | gaT | 19 | 19 | AY.44 | 0.000116 |
N | 371 | D371D | gaC | gaT | 19 | 19 | C.38 | 0.153226 |
N | 371 | D371E | gaC | gaA | 13 | 18 | AY.3 | 0.000129 |
N | 371 | D371E | gaC | gaG | 5 | 18 | AY.3 | 0.00005 |
N | 371 | D371Y | Gac | Tac | 17 | 17 | B.1.1.7 | 0.000015 |
N | 371 | D371D | gaC | gaT | 16 | 16 | AY.53 | 0.0046 |
N | 371 | D371E | gaC | gaA | 16 | 16 | B.1.1.372 | 0.011019 |
N | 371 | D371del | GAC | --- | 15 | 15 | B.1.1.7 | 0.000013 |
N | 371 | D371Y | Gac | Tac | 15 | 15 | B.1.596 | 0.001307 |
N | 371 | D371H | Gac | Cac | 14 | 14 | All | 0.000003 |
N | 371 | D371E | gaC | gaA | 14 | 14 | AY.25 | 0.000084 |
N | 371 | D371N | Gac | Aac | 14 | 14 | B.1.160 | 0.000437 |
N | 371 | D371D | gaC | gaT | 14 | 14 | B.1.240 | 0.003018 |
N | 371 | D371K | GaC | AaA | 11 | 13 | All | 0.000002 |
N | 371 | D371del1 | gaC | ga- | 9 | 13 | All | 0.000002 |
N | 371 | D371K | GaC | AaG | 2 | 13 | All | 0 |
N | 371 | D371del1 | GAC | -NN | 1 | 13 | All | 0 |
N | 371 | D371del1 | GAc | -Cc | 1 | 13 | All | 0 |
N | 371 | D371del1 | GaC | Ca- | 1 | 13 | All | 0 |
N | 371 | D371del1 | gAc | g-c | 1 | 13 | All | 0 |
N | 371 | D371D | gaC | gaT | 13 | 13 | B.1.177.6 | 0.012695 |
N | 371 | D371D | gaC | gaT | 12 | 12 | B.1.1.39 | 0.006116 |
N | 371 | D371N | Gac | Aac | 12 | 12 | B.1.36.22 | 0.014493 |
N | 371 | D371E | gaC | gaA | 10 | 10 | AY.33 | 0.000668 |
N | 371 | D371D | gaC | gaT | 10 | 10 | B.1.427 | 0.000505 |
N | 371 | D371del2 | GAC | A-- | 5 | 9 | All | 0.000001 |
N | 371 | D371del2 | gAC | g-- | 4 | 9 | All | 0.000001 |
N | 371 | D371E | gaC | gaA | 9 | 9 | AY.5 | 0.000186 |
N | 371 | D371E | gaC | gaA | 9 | 9 | AY.64 | 0.005357 |
N | 371 | D371V | gAc | gTc | 9 | 9 | B.1.1 | 0.000163 |
N | 371 | D371N | Gac | Aac | 9 | 9 | B.1.1.153 | 0.009858 |
N | 371 | D371Y | Gac | Tac | 9 | 9 | B.1.1.218 | 0.069231 |
N | 371 | D371Y | Gac | Tac | 9 | 9 | B.1.177.81 | 0.001704 |
N | 371 | D371D | gaC | gaT | 9 | 9 | B.1.416.1 | 0.014063 |
N | 371 | D371E | gaC | gaA | 9 | 9 | C.37 | 0.001045 |
N | 371 | D371E | gaC | gaA | 8 | 8 | AY.120 | 0.000297 |
N | 371 | D371E | gaC | gaA | 8 | 8 | AY.26 | 0.000226 |
N | 371 | D371del | GAC | --- | 8 | 8 | AY.4 | 0.000012 |
N | 371 | D371del | GAC | --- | 8 | 8 | B.1 | 0.000073 |
N | 371 | D371E | gaC | gaA | 8 | 8 | B.1.1 | 0.000145 |
N | 371 | D371D | gaC | gaT | 8 | 8 | B.1.177.9 | 0.010652 |
N | 371 | D371D | gaC | gaT | 8 | 8 | B.1.2 | 0.00007 |
N | 371 | D371E | gaC | gaA | 8 | 8 | B.1.429 | 0.000188 |
N | 371 | D371D | gaC | gaT | 8 | 8 | B.1.429 | 0.000188 |
N | 371 | D371N | Gac | Aac | 8 | 8 | P.1 | 0.000126 |
N | 371 | D371D | gaC | gaT | 7 | 7 | AY.29 | 0.00011 |
N | 371 | D371D | gaC | gaT | 7 | 7 | AY.47 | 0.000218 |
N | 371 | D371N | Gac | Aac | 7 | 7 | B.1 | 0.000064 |
N | 371 | D371del | GAC | --- | 7 | 7 | B.1.1 | 0.000127 |
N | 371 | D371D | gaC | gaT | 7 | 7 | B.1.1.100 | 0.28 |
N | 371 | D371D | gaC | gaT | 7 | 7 | B.1.1.432 | 0.008861 |
N | 371 | D371K | GaC | AaA | 6 | 7 | B.1.1.7 | 0.000005 |
N | 371 | D371V | gAC | gTA | 3 | 7 | B.1.1.7 | 0.000003 |
N | 371 | D371V | gAC | gTT | 2 | 7 | B.1.1.7 | 0.000002 |
N | 371 | D371V | gAC | gTG | 1 | 7 | B.1.1.7 | 0.000001 |
N | 371 | D371K | GaC | AaG | 1 | 7 | B.1.1.7 | 0.000001 |
N | 371 | D371V | gAc | gTc | 1 | 7 | B.1.1.7 | 0.000001 |
N | 371 | D371Y | Gac | Tac | 7 | 7 | B.1.36.29 | 0.003621 |
N | 371 | D371D | gaC | gaT | 7 | 7 | P.1 | 0.00011 |
N | 371 | D371L | GAC | CTG | 4 | 6 | All | 0.000001 |
N | 371 | D371L | GAC | TTG | 1 | 6 | All | 0 |
N | 371 | D371L | GAC | TTA | 1 | 6 | All | 0 |
N | 371 | D371E | gaC | gaA | 6 | 6 | AY.103 | 0.000037 |
N | 371 | D371D | gaC | gaT | 6 | 6 | AY.3 | 0.00006 |
N | 371 | D371V | gAc | gTc | 6 | 6 | B.1 | 0.000055 |
N | 371 | D371D | gaC | gaT | 6 | 6 | B.1.1 | 0.000109 |
N | 371 | D371Y | Gac | Tac | 6 | 6 | B.1.1.277 | 0.004552 |
N | 371 | D371D | gaC | gaT | 6 | 6 | B.1.160.32 | 0.025751 |
N | 371 | D371D | gaC | gaT | 6 | 6 | B.1.177.31 | 0.068966 |
N | 371 | D371Y | Gac | Tac | 6 | 6 | B.1.177.79 | 0.014052 |
N | 371 | D371N | Gac | Aac | 6 | 6 | B.1.2 | 0.000053 |
N | 371 | D371Y | Gac | Tac | 6 | 6 | B.1.221 | 0.000426 |
N | 371 | D371D | gaC | gaT | 6 | 6 | B.1.351 | 0.000178 |
N | 371 | D371Y | Gac | Tac | 6 | 6 | B.1.429 | 0.000141 |
N | 371 | D371del | GAC | --- | 6 | 6 | C.37 | 0.000696 |
N | 371 | D371E | gaC | gaA | 5 | 5 | AY.39 | 0.000124 |
N | 371 | D371del | GAC | --- | 5 | 5 | AY.92 | 0.001436 |
N | 371 | D371E | gaC | gaA | 5 | 5 | B.1 | 0.000046 |
N | 371 | D371D | gaC | gaT | 5 | 5 | B.1.1.216 | 0.004452 |
N | 371 | D371L | GAC | CTG | 4 | 5 | B.1.1.7 | 0.000004 |
N | 371 | D371G | gAc | gGc | 3 | 5 | B.1.1.7 | 0.000003 |
N | 371 | D371G | gAC | gGG | 1 | 5 | B.1.1.7 | 0.000001 |
N | 371 | D371L | GAC | TTA | 1 | 5 | B.1.1.7 | 0.000001 |
N | 371 | D371G | gAC | gGA | 1 | 5 | B.1.1.7 | 0.000001 |
N | 371 | D371T | GAC | ACA | 3 | 4 | All | 0.000001 |
N | 371 | D371S | GAc | AGc | 2 | 4 | All | 0 |
N | 371 | D371I | GAC | ATA | 2 | 4 | All | 0 |
N | 371 | D371S | GAc | TCc | 2 | 4 | All | 0 |
N | 371 | D371I | GAC | ATT | 2 | 4 | All | 0 |
N | 371 | D371T | GAc | ACc | 1 | 4 | All | 0 |
N | 371 | D371D | gaC | gaT | 4 | 4 | AY.102 | 0.000106 |
N | 371 | D371E | gaC | gaA | 4 | 4 | AY.119 | 0.000141 |
N | 371 | D371E | gaC | gaA | 4 | 4 | AY.20 | 0.000155 |
N | 371 | D371del | GAC | --- | 4 | 4 | AY.25 | 0.000024 |
N | 371 | D371D | gaC | gaT | 4 | 4 | AY.39 | 0.000099 |
N | 371 | D371D | gaC | gaT | 4 | 4 | AY.39.1 | 0.000158 |
N | 371 | D371Y | Gac | Tac | 4 | 4 | AY.4 | 0.000006 |
N | 371 | D371E | gaC | gaA | 4 | 4 | AY.43 | 0.000018 |
N | 371 | D371D | gaC | gaT | 4 | 4 | AY.46.4 | 0.000658 |
N | 371 | D371Y | Gac | Tac | 4 | 4 | B.1.1.216 | 0.003562 |
N | 371 | D371D | gaC | gaT | 4 | 4 | B.1.1.25 | 0.002274 |
N | 371 | D371I | GAC | ATT | 2 | 4 | B.1.1.7 | 0.000002 |
N | 371 | D371I | GAC | ATA | 2 | 4 | B.1.1.7 | 0.000002 |
N | 371 | D371N | Gac | Aac | 4 | 4 | B.1.119 | 0.042105 |
N | 371 | D371Y | Gac | Tac | 4 | 4 | B.1.160 | 0.000125 |
N | 371 | D371Y | Gac | Tac | 4 | 4 | B.1.177 | 0.000053 |
N | 371 | D371del | GAC | --- | 4 | 4 | B.1.177 | 0.000053 |
N | 371 | D371E | gaC | gaA | 4 | 4 | B.1.177 | 0.000053 |
N | 371 | D371N | Gac | Aac | 4 | 4 | B.1.177.4 | 0.000844 |
N | 371 | D371D | gaC | gaT | 4 | 4 | B.1.177.73 | 0.002265 |
N | 371 | D371del | GAC | --- | 4 | 4 | B.1.2 | 0.000035 |
N | 371 | D371D | gaC | gaT | 4 | 4 | B.1.466.2 | 0.001565 |
N | 371 | D371Y | Gac | Tac | 4 | 4 | B.1.526 | 0.000094 |
N | 371 | D371del | GAC | --- | 4 | 4 | B.1.617.2 | 0.000015 |
N | 371 | D371D | gaC | gaT | 4 | 4 | P.1.6 | 0.007782 |
N | 371 | D371E | gaC | gaA | 3 | 3 | AY.102 | 0.00008 |
N | 371 | D371D | gaC | gaT | 3 | 3 | AY.114 | 0.000693 |
N | 371 | D371D | gaC | gaT | 3 | 3 | AY.27 | 0.000194 |
N | 371 | D371del1 | gaC | ga- | 3 | 3 | AY.35 | 0.000699 |
N | 371 | D371N | Gac | Aac | 3 | 3 | AY.39 | 0.000074 |
N | 371 | D371N | Gac | Aac | 3 | 3 | AY.4 | 0.000005 |
N | 371 | D371D | gaC | gaT | 3 | 3 | AY.69 | 0.00056 |
N | 371 | D371D | gaC | gaT | 3 | 3 | AY.7 | 0.000588 |
N | 371 | D371A | gAc | gCc | 3 | 3 | B.1 | 0.000027 |
N | 371 | D371N | Gac | Aac | 3 | 3 | B.1.1.28 | 0.000934 |
N | 371 | D371Y | Gac | Tac | 3 | 3 | B.1.1.306 | 0.001315 |
N | 371 | D371V | gAc | gTc | 3 | 3 | B.1.1.33 | 0.001263 |
N | 371 | D371del2 | gAC | g-- | 3 | 3 | B.1.177.12 | 0.000455 |
N | 371 | D371D | gaC | gaT | 3 | 3 | B.1.177.21 | 0.000229 |
N | 371 | D371E | gaC | gaA | 3 | 3 | B.1.177.40 | 0.015464 |
N | 371 | D371D | gaC | gaT | 3 | 3 | B.1.177.45 | 0.001144 |
N | 371 | D371D | gaC | gaT | 3 | 3 | B.1.177.86 | 0.00055 |
N | 371 | D371Y | Gac | Tac | 3 | 3 | B.1.243 | 0.000209 |
N | 371 | D371D | gaC | gaT | 3 | 3 | B.1.258 | 0.0002 |
N | 371 | D371Y | Gac | Tac | 3 | 3 | B.1.258 | 0.0002 |
N | 371 | D371E | gaC | gaA | 3 | 3 | B.1.36.8 | 0.003 |
N | 371 | D371E | gaC | gaA | 3 | 3 | B.1.525 | 0.000339 |
N | 371 | D371A | gAc | gCc | 3 | 3 | B.1.596 | 0.000261 |
N | 371 | D371N | Gac | Aac | 3 | 3 | B.1.617.2 | 0.000011 |
N | 371 | D371Y | Gac | Tac | 3 | 3 | B.1.621 | 0.000266 |
N | 371 | D371N | Gac | Aac | 3 | 3 | C.35 | 0.002322 |
N | 371 | D371Y | Gac | Tac | 3 | 3 | P.1 | 0.000047 |
N | 371 | D371D | gaC | gaT | 3 | 3 | P.1.14 | 0.000143 |
N | 371 | D371A | gAc | gCc | 2 | 2 | 0.111111 | |
N | 371 | D371G | gAc | gGc | 2 | 2 | 0.111111 | |
N | 371 | D371del | GAC | --- | 2 | 2 | 0.111111 | |
N | 371 | D371C | GAc | TGc | 2 | 2 | 0.111111 | |
N | 371 | D371C | GAc | TGc | 2 | 2 | All | 0 |
N | 371 | D371F | GAc | TTc | 2 | 2 | All | 0 |
N | 371 | D371R | GAC | AGA | 1 | 2 | All | 0 |
N | 371 | D371P | GAC | CCA | 1 | 2 | All | 0 |
N | 371 | D371P | GAc | CCc | 1 | 2 | All | 0 |
N | 371 | D371R | GAC | AGG | 1 | 2 | All | 0 |
N | 371 | D371E | gaC | gaA | 2 | 2 | AY.100 | 0.000092 |
N | 371 | D371H | Gac | Cac | 2 | 2 | AY.103 | 0.000012 |
N | 371 | D371del | GAC | --- | 2 | 2 | AY.103 | 0.000012 |
N | 371 | D371D | gaC | gaT | 2 | 2 | AY.118 | 0.000125 |
N | 371 | D371D | gaC | gaT | 2 | 2 | AY.16 | 0.000759 |
N | 371 | D371del | GAC | --- | 2 | 2 | AY.16 | 0.000759 |
N | 371 | D371D | gaC | gaT | 2 | 2 | AY.23 | 0.000139 |
N | 371 | D371D | gaC | gaT | 2 | 2 | AY.26 | 0.000057 |
N | 371 | D371Y | Gac | Tac | 2 | 2 | AY.26 | 0.000057 |
N | 371 | D371del | GAC | --- | 2 | 2 | AY.26 | 0.000057 |
N | 371 | D371E | gaC | gaA | 2 | 2 | AY.29 | 0.000032 |
N | 371 | D371E | gaC | gaA | 2 | 2 | AY.34 | 0.000194 |
N | 371 | D371D | gaC | gaT | 2 | 2 | AY.37 | 0.000632 |
N | 371 | D371N | Gac | Aac | 2 | 2 | AY.39.1 | 0.000079 |
N | 371 | D371S | GAc | TCc | 2 | 2 | AY.4 | 0.000003 |
N | 371 | D371Y | Gac | Tac | 2 | 2 | AY.4.2 | 0.000043 |
N | 371 | D371D | gaC | gaT | 2 | 2 | AY.4.2 | 0.000043 |
N | 371 | D371N | Gac | Aac | 2 | 2 | AY.42 | 0.00008 |
N | 371 | D371del | GAC | --- | 2 | 2 | AY.43 | 0.000009 |
N | 371 | D371E | gaC | gaA | 2 | 2 | AY.46 | 0.000208 |
N | 371 | D371D | gaC | gaT | 2 | 2 | AY.67 | 0.000929 |
N | 371 | D371E | gaC | gaA | 2 | 2 | AY.75 | 0.000112 |
N | 371 | D371D | gaC | gaT | 2 | 2 | AY.79 | 0.002421 |
N | 371 | D371D | gaC | gaT | 2 | 2 | AY.80 | 0.002257 |
N | 371 | D371E | gaC | gaA | 2 | 2 | AY.85 | 0.000854 |
N | 371 | D371D | gaC | gaT | 2 | 2 | AY.9.2 | 0.000073 |
N | 371 | D371D | gaC | gaT | 2 | 2 | B | 0.000256 |
N | 371 | D371del2 | GAC | A-- | 2 | 2 | B.1 | 0.000018 |
N | 371 | D371A | gAc | gCc | 2 | 2 | B.1.1.25 | 0.001137 |
N | 371 | D371E | gaC | gaA | 2 | 2 | B.1.1.33 | 0.000842 |
N | 371 | D371D | gaC | gaT | 2 | 2 | B.1.1.372 | 0.001377 |
N | 371 | D371V | gAc | gTc | 2 | 2 | B.1.1.462 | 0.017241 |
N | 371 | D371H | Gac | Cac | 2 | 2 | B.1.1.7 | 0.000002 |
N | 371 | D371T | GAC | ACA | 1 | 2 | B.1.1.7 | 0.000001 |
N | 371 | D371R | GAC | AGG | 1 | 2 | B.1.1.7 | 0.000001 |
N | 371 | D371T | GAc | ACc | 1 | 2 | B.1.1.7 | 0.000001 |
N | 371 | D371P | GAC | CCA | 1 | 2 | B.1.1.7 | 0.000001 |
N | 371 | D371P | GAc | CCc | 1 | 2 | B.1.1.7 | 0.000001 |
N | 371 | D371R | GAC | AGA | 1 | 2 | B.1.1.7 | 0.000001 |
N | 371 | D371del | GAC | --- | 2 | 2 | B.1.160 | 0.000062 |
N | 371 | D371D | gaC | gaT | 2 | 2 | B.1.160.10 | 0.016129 |
N | 371 | D371del1 | gaC | ga- | 2 | 2 | B.1.177 | 0.000026 |
N | 371 | D371E | gaC | gaA | 2 | 2 | B.1.177.12 | 0.000303 |
N | 371 | D371del1 | gaC | ga- | 2 | 2 | B.1.177.12 | 0.000303 |
N | 371 | D371D | gaC | gaT | 2 | 2 | B.1.177.24 | 0.002591 |
N | 371 | D371D | gaC | gaT | 2 | 2 | B.1.177.52 | 0.003515 |
N | 371 | D371D | gaC | gaT | 2 | 2 | B.1.177.57 | 0.000562 |
N | 371 | D371E | gaC | gaA | 2 | 2 | B.1.177.58 | 0.002663 |
N | 371 | D371D | gaC | gaT | 2 | 2 | B.1.177.84 | 0.013333 |
N | 371 | D371Y | Gac | Tac | 2 | 2 | B.1.236 | 0.004107 |
N | 371 | D371D | gaC | gaT | 2 | 2 | B.1.243 | 0.000139 |
N | 371 | D371A | gAc | gCc | 2 | 2 | B.1.313 | 0.013158 |
N | 371 | D371Y | Gac | Tac | 2 | 2 | B.1.349 | 0.00143 |
N | 371 | D371E | gaC | gaA | 2 | 2 | B.1.351 | 0.000059 |
N | 371 | D371N | Gac | Aac | 2 | 2 | B.1.36.1 | 0.002281 |
N | 371 | D371D | gaC | gaT | 2 | 2 | B.1.381 | 0.015625 |
N | 371 | D371Y | Gac | Tac | 2 | 2 | B.1.403 | 0.006536 |
N | 371 | D371D | gaC | gaT | 2 | 2 | B.1.497 | 0.00063 |
N | 371 | D371E | gaC | gaA | 2 | 2 | B.1.526 | 0.000047 |
N | 371 | D371D | gaC | gaT | 2 | 2 | B.1.526 | 0.000047 |
N | 371 | D371A | gAc | gCc | 2 | 2 | B.1.587 | 0.003795 |
N | 371 | D371del | GAC | --- | 2 | 2 | B.1.617.1 | 0.000258 |
N | 371 | D371E | gaC | gaA | 2 | 2 | B.1.628 | 0.000705 |
N | 371 | D371E | gaC | gaA | 2 | 2 | B.1.637 | 0.000146 |
N | 371 | D371Y | Gac | Tac | 2 | 2 | C.1 | 0.004785 |
N | 371 | D371D | gaC | gaT | 2 | 2 | C.37 | 0.000232 |
N | 371 | D371Y | Gac | Tac | 2 | 2 | D.2 | 0.00015 |
N | 371 | D371del | GAC | --- | 2 | 2 | P.1 | 0.000032 |
N | 371 | D371G | gAc | gGc | 2 | 2 | P.1.14 | 0.000096 |
N | 371 | D371D | gaC | gaT | 2 | 2 | P.1.15 | 0.000465 |
N | 371 | D371Y | Gac | Tac | 2 | 2 | P.1.15 | 0.000465 |
N | 371 | D371Y | Gac | Tac | 2 | 2 | P.1.4 | 0.001953 |
N | 371 | D371Y | Gac | Tac | 2 | 2 | P.2 | 0.000373 |
N | 371 | D371T | GAC | ACA | 1 | 1 | A.1 | 0.000282 |
N | 371 | D371Y | Gac | Tac | 1 | 1 | A.2.5 | 0.000499 |
N | 371 | D371G | gAc | gGc | 1 | 1 | AE.8 | 0.000489 |
N | 371 | D371Q | GaC | CaA | 1 | 1 | All | 0 |
N | 371 | D371M | GAC | ATG | 1 | 1 | All | 0 |
N | 371 | D371X | GaC | TaA | 1 | 1 | All | 0 |
N | 371 | D371D | gaC | gaT | 1 | 1 | AN.1 | 0.02 |
N | 371 | D371del | GAC | --- | 1 | 1 | AY.101 | 0.00049 |
N | 371 | D371del | GAC | --- | 1 | 1 | AY.102 | 0.000027 |
N | 371 | D371G | gAc | gGc | 1 | 1 | AY.103 | 0.000006 |
N | 371 | D371del2 | GAC | A-- | 1 | 1 | AY.103 | 0.000006 |
N | 371 | D371del | GAC | --- | 1 | 1 | AY.114 | 0.000231 |
N | 371 | D371E | gaC | gaA | 1 | 1 | AY.116.1 | 0.000311 |
N | 371 | D371E | gaC | gaA | 1 | 1 | AY.117 | 0.000085 |
N | 371 | D371E | gaC | gaA | 1 | 1 | AY.118 | 0.000063 |
N | 371 | D371del | GAC | --- | 1 | 1 | AY.119 | 0.000035 |
N | 371 | D371E | gaC | gaA | 1 | 1 | AY.12 | 0.000316 |
N | 371 | D371N | Gac | Aac | 1 | 1 | AY.120 | 0.000037 |
N | 371 | D371E | gaC | gaA | 1 | 1 | AY.13 | 0.000161 |
N | 371 | D371Y | Gac | Tac | 1 | 1 | AY.13 | 0.000161 |
N | 371 | D371N | Gac | Aac | 1 | 1 | AY.14 | 0.000088 |
N | 371 | D371V | gAC | gTT | 1 | 1 | AY.20 | 0.000039 |
N | 371 | D371N | Gac | Aac | 1 | 1 | AY.23 | 0.00007 |
N | 371 | D371T | GAC | ACA | 1 | 1 | AY.23 | 0.00007 |
N | 371 | D371D | gaC | gaT | 1 | 1 | AY.23.1 | 0.000417 |
N | 371 | D371A | gAc | gCc | 1 | 1 | AY.26 | 0.000028 |
N | 371 | D371D | gaC | gaT | 1 | 1 | AY.30 | 0.000396 |
N | 371 | D371E | gaC | gaA | 1 | 1 | AY.30 | 0.000396 |
N | 371 | D371D | gaC | gaT | 1 | 1 | AY.33 | 0.000067 |
N | 371 | D371del | GAC | --- | 1 | 1 | AY.33 | 0.000067 |
N | 371 | D371del | GAC | --- | 1 | 1 | AY.34 | 0.000097 |
N | 371 | D371K | GaC | AaA | 1 | 1 | AY.35 | 0.000233 |
N | 371 | D371K | GaC | AaA | 1 | 1 | AY.39 | 0.000025 |
N | 371 | D371del | GAC | --- | 1 | 1 | AY.39 | 0.000025 |
N | 371 | D371H | Gac | Cac | 1 | 1 | AY.4 | 0.000002 |
N | 371 | D371G | gAc | gGc | 1 | 1 | AY.4 | 0.000002 |
N | 371 | D371D | gaC | gaT | 1 | 1 | AY.4.1 | 0.000737 |
N | 371 | D371E | gaC | gaA | 1 | 1 | AY.4.3 | 0.000842 |
N | 371 | D371Y | Gac | Tac | 1 | 1 | AY.43 | 0.000004 |
N | 371 | D371G | gAc | gGc | 1 | 1 | AY.43 | 0.000004 |
N | 371 | D371H | Gac | Cac | 1 | 1 | AY.43 | 0.000004 |
N | 371 | D371N | Gac | Aac | 1 | 1 | AY.44 | 0.000006 |
N | 371 | D371del | GAC | --- | 1 | 1 | AY.44 | 0.000006 |
N | 371 | D371H | Gac | Cac | 1 | 1 | AY.44 | 0.000006 |
N | 371 | D371del2 | GAC | A-- | 1 | 1 | AY.44 | 0.000006 |
N | 371 | D371N | Gac | Aac | 1 | 1 | AY.45 | 0.000122 |
N | 371 | D371E | gaC | gaA | 1 | 1 | AY.45 | 0.000122 |
N | 371 | D371D | gaC | gaT | 1 | 1 | AY.45 | 0.000122 |
N | 371 | D371E | gaC | gaA | 1 | 1 | AY.46.4 | 0.000165 |
N | 371 | D371E | gaC | gaA | 1 | 1 | AY.47 | 0.000031 |
N | 371 | D371del | GAC | --- | 1 | 1 | AY.5 | 0.000021 |
N | 371 | D371D | gaC | gaT | 1 | 1 | AY.5.3 | 0.000337 |
N | 371 | D371Y | Gac | Tac | 1 | 1 | AY.6 | 0.000041 |
N | 371 | D371E | gaC | gaA | 1 | 1 | AY.6 | 0.000041 |
N | 371 | D371E | gaC | gaA | 1 | 1 | AY.61 | 0.000105 |
N | 371 | D371del2 | gAC | g-- | 1 | 1 | AY.62 | 0.000436 |
N | 371 | D371del | GAC | --- | 1 | 1 | AY.67 | 0.000464 |
N | 371 | D371E | gaC | gaG | 1 | 1 | AY.69 | 0.000187 |
N | 371 | D371N | Gac | Aac | 1 | 1 | AY.69 | 0.000187 |
N | 371 | D371D | gaC | gaT | 1 | 1 | AY.7.1 | 0.000113 |
N | 371 | D371E | gaC | gaA | 1 | 1 | AY.74 | 0.000116 |
N | 371 | D371E | gaC | gaA | 1 | 1 | AY.78 | 0.001541 |
N | 371 | D371del | GAC | --- | 1 | 1 | AY.84 | 0.000437 |
N | 371 | D371D | gaC | gaT | 1 | 1 | AY.84 | 0.000437 |
N | 371 | D371D | gaC | gaT | 1 | 1 | AY.9 | 0.000068 |
N | 371 | D371N | Gac | Aac | 1 | 1 | AY.9.1 | 0.000084 |
N | 371 | D371Y | Gac | Tac | 1 | 1 | AY.9.2 | 0.000037 |
N | 371 | D371E | gaC | gaA | 1 | 1 | AY.9.2 | 0.000037 |
N | 371 | D371D | gaC | gaT | 1 | 1 | AY.92 | 0.000287 |
N | 371 | D371N | Gac | Aac | 1 | 1 | AY.92 | 0.000287 |
N | 371 | D371E | gaC | gaA | 1 | 1 | AY.94 | 0.000443 |
N | 371 | D371D | gaC | gaT | 1 | 1 | AY.98 | 0.000079 |
N | 371 | D371Y | Gac | Tac | 1 | 1 | AY.98 | 0.000079 |
N | 371 | D371D | gaC | gaT | 1 | 1 | AY.98.1 | 0.000048 |
N | 371 | D371E | gaC | gaA | 1 | 1 | AY.98.1 | 0.000048 |
N | 371 | D371E | gaC | gaA | 1 | 1 | AY.99.2 | 0.000092 |
N | 371 | D371D | gaC | gaT | 1 | 1 | AZ.2 | 0.000821 |
N | 371 | D371V | gAc | gTc | 1 | 1 | B | 0.000128 |
N | 371 | D371G | gAc | gGc | 1 | 1 | B.1 | 0.000009 |
N | 371 | D371del1 | GAC | -NN | 1 | 1 | B.1 | 0.000009 |
N | 371 | D371H | Gac | Cac | 1 | 1 | B.1 | 0.000009 |
N | 371 | D371F | GAc | TTc | 1 | 1 | B.1 | 0.000009 |
N | 371 | D371L | GAC | TTG | 1 | 1 | B.1.1 | 0.000018 |
N | 371 | D371A | gAc | gCc | 1 | 1 | B.1.1 | 0.000018 |
N | 371 | D371G | gAc | gGc | 1 | 1 | B.1.1 | 0.000018 |
N | 371 | D371N | Gac | Aac | 1 | 1 | B.1.1 | 0.000018 |
N | 371 | D371Y | Gac | Tac | 1 | 1 | B.1.1.1 | 0.000327 |
N | 371 | D371E | gaC | gaA | 1 | 1 | B.1.1.1 | 0.000327 |
N | 371 | D371del | GAC | --- | 1 | 1 | B.1.1.139 | 0.022727 |
N | 371 | D371Y | Gac | Tac | 1 | 1 | B.1.1.176 | 0.000439 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.1.189 | 0.001513 |
N | 371 | D371V | gAc | gTc | 1 | 1 | B.1.1.192 | 0.002309 |
N | 371 | D371V | gAc | gTc | 1 | 1 | B.1.1.194 | 0.00495 |
N | 371 | D371A | gAc | gCc | 1 | 1 | B.1.1.216 | 0.00089 |
N | 371 | D371V | gAc | gTc | 1 | 1 | B.1.1.218 | 0.007692 |
N | 371 | D371E | gaC | gaA | 1 | 1 | B.1.1.222 | 0.000204 |
N | 371 | D371del | GAC | --- | 1 | 1 | B.1.1.236 | 0.006897 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.1.269 | 0.001353 |
N | 371 | D371K | GaC | AaG | 1 | 1 | B.1.1.27 | 0.00565 |
N | 371 | D371E | gaC | gaA | 1 | 1 | B.1.1.28 | 0.000311 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.1.303 | 0.002762 |
N | 371 | D371N | Gac | Aac | 1 | 1 | B.1.1.305 | 0.003861 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.1.306 | 0.000438 |
N | 371 | D371V | gAc | gTc | 1 | 1 | B.1.1.306 | 0.000438 |
N | 371 | D371E | gaC | gaA | 1 | 1 | B.1.1.320 | 0.018182 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.1.326 | 0.001761 |
N | 371 | D371K | GaC | AaA | 1 | 1 | B.1.1.33 | 0.000421 |
N | 371 | D371N | Gac | Aac | 1 | 1 | B.1.1.33 | 0.000421 |
N | 371 | D371N | Gac | Aac | 1 | 1 | B.1.1.348 | 0.000796 |
N | 371 | D371del1 | gAc | g-c | 1 | 1 | B.1.1.353 | 0.020833 |
N | 371 | D371N | Gac | Aac | 1 | 1 | B.1.1.369 | 0.000446 |
N | 371 | D371del | GAC | --- | 1 | 1 | B.1.1.37 | 0.000193 |
N | 371 | D371N | Gac | Aac | 1 | 1 | B.1.1.372 | 0.000689 |
N | 371 | D371G | gAc | gGc | 1 | 1 | B.1.1.389 | 0.006061 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.1.389 | 0.006061 |
N | 371 | D371Y | Gac | Tac | 1 | 1 | B.1.1.39 | 0.00051 |
N | 371 | D371A | gAc | gCc | 1 | 1 | B.1.1.432 | 0.001266 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.1.433 | 0.001425 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.1.434 | 0.000349 |
N | 371 | D371N | Gac | Aac | 1 | 1 | B.1.1.50 | 0.000679 |
N | 371 | D371E | gaC | gaA | 1 | 1 | B.1.1.516 | 0.066667 |
N | 371 | D371E | gaC | gaA | 1 | 1 | B.1.1.519 | 0.00004 |
N | 371 | D371Y | Gac | Tac | 1 | 1 | B.1.1.519 | 0.00004 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.1.519 | 0.00004 |
N | 371 | D371N | Gac | Aac | 1 | 1 | B.1.1.519 | 0.00004 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.1.521 | 0.005348 |
N | 371 | D371E | gaC | gaA | 1 | 1 | B.1.1.521 | 0.005348 |
N | 371 | D371M | GAC | ATG | 1 | 1 | B.1.1.7 | 0.000001 |
N | 371 | D371Q | GaC | CaA | 1 | 1 | B.1.1.7 | 0.000001 |
N | 371 | D371del1 | gaC | ga- | 1 | 1 | B.1.1.7 | 0.000001 |
N | 371 | D371S | GAc | AGc | 1 | 1 | B.1.1.7 | 0.000001 |
N | 371 | D371X | GaC | TaA | 1 | 1 | B.1.1.7 | 0.000001 |
N | 371 | D371F | GAc | TTc | 1 | 1 | B.1.1.7 | 0.000001 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.1.70 | 0.000341 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.1.71 | 0.006061 |
N | 371 | D371V | gAc | gTc | 1 | 1 | B.1.1.95 | 0.019608 |
N | 371 | D371Y | Gac | Tac | 1 | 1 | B.1.111 | 0.001175 |
N | 371 | D371E | gaC | gaA | 1 | 1 | B.1.139 | 0.000733 |
N | 371 | D371del | GAC | --- | 1 | 1 | B.1.140 | 0.018868 |
N | 371 | D371G | gAc | gGc | 1 | 1 | B.1.160 | 0.000031 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.160.25 | 0.011111 |
N | 371 | D371del | GAC | --- | 1 | 1 | B.1.162 | 0.005025 |
N | 371 | D371H | Gac | Cac | 1 | 1 | B.1.177 | 0.000013 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.177.17 | 0.000821 |
N | 371 | D371N | Gac | Aac | 1 | 1 | B.1.177.18 | 0.00116 |
N | 371 | D371E | gaC | gaA | 1 | 1 | B.1.177.21 | 0.000076 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.177.23 | 0.003236 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.177.32 | 0.00135 |
N | 371 | D371del1 | gaC | ga- | 1 | 1 | B.1.177.35 | 0.000691 |
N | 371 | D371E | gaC | gaA | 1 | 1 | B.1.177.43 | 0.001477 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.177.50 | 0.004695 |
N | 371 | D371del | GAC | --- | 1 | 1 | B.1.177.62 | 0.001192 |
N | 371 | D371H | Gac | Cac | 1 | 1 | B.1.177.63 | 0.002703 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.177.65 | 0.000665 |
N | 371 | D371del | GAC | --- | 1 | 1 | B.1.177.7 | 0.000165 |
N | 371 | D371E | gaC | gaA | 1 | 1 | B.1.177.7 | 0.000165 |
N | 371 | D371E | gaC | gaA | 1 | 1 | B.1.177.81 | 0.000189 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.177.81 | 0.000189 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.177.83 | 0.001481 |
N | 371 | D371V | gAc | gTc | 1 | 1 | B.1.2 | 0.000009 |
N | 371 | D371K | GaC | AaA | 1 | 1 | B.1.2 | 0.000009 |
N | 371 | D371Y | Gac | Tac | 1 | 1 | B.1.206 | 0.000816 |
N | 371 | D371Y | Gac | Tac | 1 | 1 | B.1.214 | 0.003663 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.22 | 0.001318 |
N | 371 | D371del | GAC | --- | 1 | 1 | B.1.221 | 0.000071 |
N | 371 | D371N | Gac | Aac | 1 | 1 | B.1.221 | 0.000071 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.222 | 0.001692 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.236 | 0.002053 |
N | 371 | D371Y | Gac | Tac | 1 | 1 | B.1.240 | 0.000216 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.258.11 | 0.000396 |
N | 371 | D371V | gAc | gTc | 1 | 1 | B.1.258.17 | 0.000104 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.258.21 | 0.007752 |
N | 371 | D371Y | Gac | Tac | 1 | 1 | B.1.258.3 | 0.001675 |
N | 371 | D371Y | Gac | Tac | 1 | 1 | B.1.258.4 | 0.003448 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.260 | 0.003344 |
N | 371 | D371Y | Gac | Tac | 1 | 1 | B.1.305 | 0.002151 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.35 | 0.008475 |
N | 371 | D371Y | Gac | Tac | 1 | 1 | B.1.351 | 0.00003 |
N | 371 | D371del1 | GaC | Ca- | 1 | 1 | B.1.36 | 0.000146 |
N | 371 | D371E | gaC | gaA | 1 | 1 | B.1.36 | 0.000146 |
N | 371 | D371N | Gac | Aac | 1 | 1 | B.1.36 | 0.000146 |
N | 371 | D371del | GAC | --- | 1 | 1 | B.1.36.17 | 0.000494 |
N | 371 | D371E | gaC | gaA | 1 | 1 | B.1.36.18 | 0.00042 |
N | 371 | D371del1 | GAc | -Cc | 1 | 1 | B.1.36.22 | 0.001208 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.36.22 | 0.001208 |
N | 371 | D371Y | Gac | Tac | 1 | 1 | B.1.36.26 | 0.002857 |
N | 371 | D371Y | Gac | Tac | 1 | 1 | B.1.36.31 | 0.001751 |
N | 371 | D371del | GAC | --- | 1 | 1 | B.1.36.8 | 0.001 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.362 | 0.001541 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.375 | 0.00082 |
N | 371 | D371del | GAC | --- | 1 | 1 | B.1.375 | 0.00082 |
N | 371 | D371Y | Gac | Tac | 1 | 1 | B.1.396 | 0.000706 |
N | 371 | D371del | GAC | --- | 1 | 1 | B.1.415 | 0.014286 |
N | 371 | D371H | Gac | Cac | 1 | 1 | B.1.416 | 0.001269 |
N | 371 | D371N | Gac | Aac | 1 | 1 | B.1.416 | 0.001269 |
N | 371 | D371Y | Gac | Tac | 1 | 1 | B.1.416 | 0.001269 |
N | 371 | D371del | GAC | --- | 1 | 1 | B.1.416.1 | 0.001563 |
N | 371 | D371Y | Gac | Tac | 1 | 1 | B.1.417 | 0.028571 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.421 | 0.007463 |
N | 371 | D371E | gaC | gaA | 1 | 1 | B.1.423 | 0.010204 |
N | 371 | D371E | gaC | gaA | 1 | 1 | B.1.428 | 0.00102 |
N | 371 | D371G | gAc | gGc | 1 | 1 | B.1.429 | 0.000024 |
N | 371 | D371N | Gac | Aac | 1 | 1 | B.1.429 | 0.000024 |
N | 371 | D371A | gAc | gCc | 1 | 1 | B.1.429 | 0.000024 |
N | 371 | D371K | GaC | AaA | 1 | 1 | B.1.429 | 0.000024 |
N | 371 | D371del | GAC | --- | 1 | 1 | B.1.438.1 | 0.000107 |
N | 371 | D371Y | Gac | Tac | 1 | 1 | B.1.442 | 0.035714 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.462 | 0.007246 |
N | 371 | D371Y | Gac | Tac | 1 | 1 | B.1.466 | 0.023256 |
N | 371 | D371N | Gac | Aac | 1 | 1 | B.1.466 | 0.023256 |
N | 371 | D371G | gAc | gGc | 1 | 1 | B.1.466.2 | 0.000391 |
N | 371 | D371Y | Gac | Tac | 1 | 1 | B.1.471 | 0.002732 |
N | 371 | D371Y | Gac | Tac | 1 | 1 | B.1.501 | 0.007353 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.509 | 0.000866 |
N | 371 | D371Y | Gac | Tac | 1 | 1 | B.1.521 | 0.004975 |
N | 371 | D371Y | Gac | Tac | 1 | 1 | B.1.524 | 0.001406 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.525 | 0.000113 |
N | 371 | D371del | GAC | --- | 1 | 1 | B.1.526 | 0.000024 |
N | 371 | D371Y | Gac | Tac | 1 | 1 | B.1.527 | 0.003704 |
N | 371 | D371Y | Gac | Tac | 1 | 1 | B.1.566 | 0.019231 |
N | 371 | D371N | Gac | Aac | 1 | 1 | B.1.576 | 0.000907 |
N | 371 | D371Y | Gac | Tac | 1 | 1 | B.1.576 | 0.000907 |
N | 371 | D371Y | Gac | Tac | 1 | 1 | B.1.580 | 0.004065 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.590 | 0.004545 |
N | 371 | D371Y | Gac | Tac | 1 | 1 | B.1.595 | 0.000261 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.595 | 0.000261 |
N | 371 | D371A | gAc | gCc | 1 | 1 | B.1.601 | 0.030303 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.609 | 0.000479 |
N | 371 | D371V | gAc | gTc | 1 | 1 | B.1.609 | 0.000479 |
N | 371 | D371Y | Gac | Tac | 1 | 1 | B.1.617.1 | 0.000129 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.617.1 | 0.000129 |
N | 371 | D371A | gAc | gCc | 1 | 1 | B.1.617.1 | 0.000129 |
N | 371 | D371Y | Gac | Tac | 1 | 1 | B.1.617.2 | 0.000004 |
N | 371 | D371del2 | GAC | A-- | 1 | 1 | B.1.617.2 | 0.000004 |
N | 371 | D371A | gAc | gCc | 1 | 1 | B.1.617.2 | 0.000004 |
N | 371 | D371S | GAc | AGc | 1 | 1 | B.1.617.3 | 0.002985 |
N | 371 | D371N | Gac | Aac | 1 | 1 | B.1.619.1 | 0.000641 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.619.1 | 0.000641 |
N | 371 | D371N | Gac | Aac | 1 | 1 | B.1.621 | 0.000089 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.621 | 0.000089 |
N | 371 | D371del | GAC | --- | 1 | 1 | B.1.621 | 0.000089 |
N | 371 | D371del | GAC | --- | 1 | 1 | B.1.621.1 | 0.000506 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.627 | 0.00202 |
N | 371 | D371D | gaC | gaT | 1 | 1 | B.1.628 | 0.000352 |
N | 371 | D371del | GAC | --- | 1 | 1 | B.1.628 | 0.000352 |
N | 371 | D371del | GAC | --- | 1 | 1 | B.1.630 | 0.005236 |
N | 371 | D371G | gAc | gGc | 1 | 1 | B.1.637 | 0.000073 |
N | 371 | D371Y | Gac | Tac | 1 | 1 | B.1.78 | 0.008547 |
N | 371 | D371E | gaC | gaA | 1 | 1 | B.40 | 0.000364 |
N | 371 | D371E | gaC | gaA | 1 | 1 | B.55 | 0.00295 |
N | 371 | D371E | gaC | gaA | 1 | 1 | C.35 | 0.000774 |
N | 371 | D371H | Gac | Cac | 1 | 1 | C.37 | 0.000116 |
N | 371 | D371H | Gac | Cac | 1 | 1 | D.2 | 0.000075 |
N | 371 | D371D | gaC | gaT | 1 | 1 | D.2 | 0.000075 |
N | 371 | D371G | gAc | gGc | 1 | 1 | P.1 | 0.000016 |
N | 371 | D371Y | Gac | Tac | 1 | 1 | P.1.10 | 0.000269 |
N | 371 | D371N | Gac | Aac | 1 | 1 | P.1.10 | 0.000269 |
N | 371 | D371D | gaC | gaT | 1 | 1 | P.1.12 | 0.000484 |
N | 371 | D371D | gaC | gaT | 1 | 1 | P.1.2 | 0.001156 |
N | 371 | D371del | GAC | --- | 1 | 1 | P.2 | 0.000187 |
N | 371 | D371D | gaC | gaT | 1 | 1 | Q.3 | 0.000145 |
N | 371 | D371del | GAC | --- | 1 | 1 | Q.7 | 0.001111 |
N | 371 | D371H | Gac | Cac | 1 | 1 | Q.8 | 0.000165 |
N | 371 | D371E | gaC | gaA | 1 | 1 | Q.8 | 0.000165 |
N | 371 | D371D | gaC | gaT | 1 | 1 | Z.1 | 0.00289 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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