CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
N | 362 | T362I | nonsyn | aCa | aTa | 16445 | 16408 | 0.99775 | 29357-29359 | |
N | 362 | T362I | nonsyn | aCA | aTT | 16445 | 21 | 0.00127698 | 29357-29359 | |
N | 362 | T362I | nonsyn | aCA | aTC | 16445 | 16 | 0.00097294 | 29357-29359 | |
N | 362 | T362K | nonsyn | aCa | aAa | 861 | 832 | 0.966318 | 29357-29359 | |
N | 362 | T362K | nonsyn | aCA | aAG | 861 | 29 | 0.0336818 | 29357-29359 | |
N | 362 | T362A | nonsyn | Aca | Gca | 808 | 797 | 0.986386 | 29357-29359 | |
N | 362 | T362A | nonsyn | AcA | GcC | 808 | 7 | 0.00866337 | 29357-29359 | |
N | 362 | T362A | nonsyn | AcA | GcT | 808 | 4 | 0.00495049 | 29357-29359 | |
N | 362 | T362T | syn | acA | acT | 341 | 152 | 0.445748 | 29357-29359 | |
N | 362 | T362T | syn | acA | acG | 341 | 131 | 0.384164 | 29357-29359 | |
N | 362 | T362T | syn | acA | acC | 341 | 58 | 0.170088 | 29357-29359 | |
N | 362 | T362S | nonsyn | Aca | Tca | 140 | 75 | 0.535714 | 29357-29359 | |
N | 362 | T362S | nonsyn | aCA | aGC | 140 | 20 | 0.142857 | 29357-29359 | |
N | 362 | T362S | nonsyn | AcA | TcC | 140 | 18 | 0.128571 | 29357-29359 | |
N | 362 | T362S | nonsyn | AcA | TcT | 140 | 13 | 0.0928571 | 29357-29359 | |
N | 362 | T362S | nonsyn | AcA | TcG | 140 | 9 | 0.0642857 | 29357-29359 | |
N | 362 | T362S | nonsyn | aCA | aGT | 140 | 5 | 0.0357143 | 29357-29359 | |
N | 362 | T362R | nonsyn | aCa | aGa | 111 | 73 | 0.657658 | 29357-29359 | |
N | 362 | T362R | nonsyn | aCA | aGG | 111 | 12 | 0.108108 | 29357-29359 | |
N | 362 | T362R | nonsyn | ACa | CGa | 111 | 12 | 0.108108 | 29357-29359 | |
N | 362 | T362R | nonsyn | ACA | CGC | 111 | 6 | 0.0540541 | 29357-29359 | |
N | 362 | T362R | nonsyn | ACA | CGG | 111 | 6 | 0.0540541 | 29357-29359 | |
N | 362 | T362R | nonsyn | ACA | CGT | 111 | 2 | 0.018018 | 29357-29359 | |
N | 362 | T362X | nonsyn | ACa | TAa | 79 | 47 | 0.594937 | 29357-29359 | |
N | 362 | T362X | nonsyn | ACA | TAG | 79 | 16 | 0.202532 | 29357-29359 | |
N | 362 | T362X | nonsyn | ACa | TGa | 79 | 16 | 0.202532 | 29357-29359 | |
N | 362 | T362P | nonsyn | Aca | Cca | 73 | 39 | 0.534247 | 29357-29359 | |
N | 362 | T362P | nonsyn | AcA | CcT | 73 | 16 | 0.219178 | 29357-29359 | |
N | 362 | T362P | nonsyn | AcA | CcC | 73 | 12 | 0.164384 | 29357-29359 | |
N | 362 | T362P | nonsyn | AcA | CcG | 73 | 6 | 0.0821918 | 29357-29359 | |
N | 362 | T362N | nonsyn | aCA | aAC | 72 | 43 | 0.597222 | 29357-29359 | |
N | 362 | T362N | nonsyn | aCA | aAT | 72 | 29 | 0.402778 | 29357-29359 | |
N | 362 | T362L | nonsyn | ACa | TTa | 66 | 18 | 0.272727 | 29357-29359 | |
N | 362 | T362L | nonsyn | ACa | CTa | 66 | 16 | 0.242424 | 29357-29359 | |
N | 362 | T362L | nonsyn | ACA | CTT | 66 | 12 | 0.181818 | 29357-29359 | |
N | 362 | T362L | nonsyn | ACA | TTG | 66 | 9 | 0.136364 | 29357-29359 | |
N | 362 | T362L | nonsyn | ACA | CTC | 66 | 6 | 0.0909091 | 29357-29359 | |
N | 362 | T362L | nonsyn | ACA | CTG | 66 | 5 | 0.0757576 | 29357-29359 | |
N | 362 | T362Q | nonsyn | ACa | CAa | 43 | 32 | 0.744186 | 29357-29359 | |
N | 362 | T362Q | nonsyn | ACA | CAG | 43 | 11 | 0.255814 | 29357-29359 | |
N | 362 | T362del | del | ACA | --- | 37 | 37 | 1 | 29357-29359 | |
N | 362 | T362Y | nonsyn | ACA | TAC | 34 | 21 | 0.617647 | 29357-29359 | |
N | 362 | T362Y | nonsyn | ACA | TAT | 34 | 13 | 0.382353 | 29357-29359 | |
N | 362 | T362H | nonsyn | ACA | CAT | 27 | 16 | 0.592593 | 29357-29359 | |
N | 362 | T362H | nonsyn | ACA | CAC | 27 | 11 | 0.407407 | 29357-29359 | |
N | 362 | T362E | nonsyn | ACa | GAa | 18 | 16 | 0.888889 | 29357-29359 | |
N | 362 | T362E | nonsyn | ACA | GAG | 18 | 2 | 0.111111 | 29357-29359 | |
N | 362 | T362D | nonsyn | ACA | GAC | 16 | 12 | 0.75 | 29357-29359 | |
N | 362 | T362G | nonsyn | ACa | GGa | 16 | 8 | 0.5 | 29357-29359 | |
N | 362 | T362G | nonsyn | ACA | GGC | 16 | 7 | 0.4375 | 29357-29359 | |
N | 362 | T362D | nonsyn | ACA | GAT | 16 | 4 | 0.25 | 29357-29359 | |
N | 362 | T362G | nonsyn | ACA | GGG | 16 | 1 | 0.0625 | 29357-29359 | |
N | 362 | T362F | nonsyn | ACA | TTC | 15 | 8 | 0.533333 | 29357-29359 | |
N | 362 | T362F | nonsyn | ACA | TTT | 15 | 7 | 0.466667 | 29357-29359 | |
N | 362 | T362C | nonsyn | ACA | TGC | 14 | 10 | 0.714286 | 29357-29359 | |
N | 362 | T362C | nonsyn | ACA | TGT | 14 | 4 | 0.285714 | 29357-29359 | |
N | 362 | T362M | nonsyn | aCA | aTG | 13 | 13 | 1 | 29357-29359 | |
N | 362 | T362V | nonsyn | ACa | GTa | 13 | 5 | 0.384615 | 29357-29359 | |
N | 362 | T362V | nonsyn | ACA | GTC | 13 | 4 | 0.307692 | 29357-29359 | |
N | 362 | T362V | nonsyn | ACA | GTT | 13 | 3 | 0.230769 | 29357-29359 | |
N | 362 | T362V | nonsyn | ACA | GTG | 13 | 1 | 0.0769231 | 29357-29359 | |
N | 362 | T362W | nonsyn | ACA | TGG | 5 | 5 | 1 | 29357-29359 | |
N | 362 | T362del1 | del | aCa | a-a | 3 | 3 | 1 | 29357-29359 | |
N | 362 | T362del2 | del | ACA | M-- | 1 | 1 | 1 | 29357-29359 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
N | 362 | T362I | aCa | aTa | 16408 | 16445 | All | 0.003138 |
N | 362 | T362I | aCA | aTT | 21 | 16445 | All | 0.000004 |
N | 362 | T362I | aCA | aTC | 16 | 16445 | All | 0.000003 |
N | 362 | T362I | aCa | aTa | 2987 | 2987 | B.1.351 | 0.088793 |
N | 362 | T362I | aCa | aTa | 2348 | 2348 | B.1.617.2 | 0.008841 |
N | 362 | T362I | aCa | aTa | 1979 | 1979 | AY.107 | 0.922181 |
N | 362 | T362I | aCa | aTa | 1271 | 1271 | AY.26 | 0.035982 |
N | 362 | T362I | aCa | aTa | 1102 | 1102 | AY.4 | 0.001715 |
N | 362 | T362I | aCa | aTa | 1028 | 1029 | B.1.1.7 | 0.00092 |
N | 362 | T362I | aCA | aTC | 1 | 1029 | B.1.1.7 | 0.000001 |
N | 362 | T362K | aCa | aAa | 832 | 861 | All | 0.000159 |
N | 362 | T362K | aCA | aAG | 29 | 861 | All | 0.000006 |
N | 362 | T362A | Aca | Gca | 797 | 808 | All | 0.000152 |
N | 362 | T362A | AcA | GcC | 7 | 808 | All | 0.000001 |
N | 362 | T362A | AcA | GcT | 4 | 808 | All | 0.000001 |
N | 362 | T362A | Aca | Gca | 639 | 639 | B.1.1.519 | 0.025375 |
N | 362 | T362I | aCa | aTa | 594 | 594 | AY.39.1 | 0.02353 |
N | 362 | T362I | aCa | aTa | 420 | 420 | AY.43 | 0.001861 |
N | 362 | T362I | aCa | aTa | 342 | 342 | B.1.36.26 | 0.977143 |
N | 362 | T362T | acA | acT | 152 | 341 | All | 0.000029 |
N | 362 | T362T | acA | acG | 131 | 341 | All | 0.000025 |
N | 362 | T362T | acA | acC | 58 | 341 | All | 0.000011 |
N | 362 | T362I | aCa | aTa | 257 | 257 | AY.44 | 0.001564 |
N | 362 | T362I | aCa | aTa | 254 | 254 | B.1.2 | 0.002237 |
N | 362 | T362K | aCa | aAa | 213 | 231 | B.1.1.7 | 0.000191 |
N | 362 | T362K | aCA | aAG | 18 | 231 | B.1.1.7 | 0.000016 |
N | 362 | T362I | aCa | aTa | 212 | 212 | AY.3 | 0.002109 |
N | 362 | T362I | aCa | aTa | 204 | 204 | AY.103 | 0.001267 |
N | 362 | T362I | aCa | aTa | 150 | 150 | AY.29 | 0.002366 |
N | 362 | T362S | Aca | Tca | 75 | 140 | All | 0.000014 |
N | 362 | T362S | aCA | aGC | 20 | 140 | All | 0.000004 |
N | 362 | T362S | AcA | TcC | 18 | 140 | All | 0.000003 |
N | 362 | T362S | AcA | TcT | 13 | 140 | All | 0.000002 |
N | 362 | T362S | AcA | TcG | 9 | 140 | All | 0.000002 |
N | 362 | T362S | aCA | aGT | 5 | 140 | All | 0.000001 |
N | 362 | T362I | aCa | aTa | 101 | 132 | B.1 | 0.000925 |
N | 362 | T362I | aCA | aTT | 18 | 132 | B.1 | 0.000165 |
N | 362 | T362I | aCA | aTC | 13 | 132 | B.1 | 0.000119 |
N | 362 | T362I | aCa | aTa | 129 | 129 | AY.25 | 0.000776 |
N | 362 | T362I | aCa | aTa | 129 | 129 | R.1 | 0.011611 |
N | 362 | T362I | aCa | aTa | 117 | 117 | B.1.1.420 | 0.117706 |
N | 362 | T362I | aCa | aTa | 115 | 115 | B.1.526 | 0.002703 |
N | 362 | T362R | aCa | aGa | 73 | 111 | All | 0.000014 |
N | 362 | T362R | aCA | aGG | 12 | 111 | All | 0.000002 |
N | 362 | T362R | ACa | CGa | 12 | 111 | All | 0.000002 |
N | 362 | T362R | ACA | CGC | 6 | 111 | All | 0.000001 |
N | 362 | T362R | ACA | CGG | 6 | 111 | All | 0.000001 |
N | 362 | T362R | ACA | CGT | 2 | 111 | All | 0 |
N | 362 | T362I | aCa | aTa | 111 | 111 | B.1.221 | 0.007885 |
N | 362 | T362I | aCa | aTa | 95 | 95 | B.1.596 | 0.008278 |
N | 362 | T362K | aCa | aAa | 83 | 91 | B.1 | 0.00076 |
N | 362 | T362K | aCA | aAG | 8 | 91 | B.1 | 0.000073 |
N | 362 | T362I | aCa | aTa | 87 | 87 | P.1 | 0.001371 |
N | 362 | T362K | aCa | aAa | 86 | 86 | AY.4 | 0.000134 |
N | 362 | T362I | aCa | aTa | 84 | 85 | B.1.177 | 0.001106 |
N | 362 | T362I | aCA | aTT | 1 | 85 | B.1.177 | 0.000013 |
N | 362 | T362I | aCa | aTa | 83 | 83 | B.1.427 | 0.004191 |
N | 362 | T362X | ACa | TAa | 47 | 79 | All | 0.000009 |
N | 362 | T362X | ACa | TGa | 16 | 79 | All | 0.000003 |
N | 362 | T362X | ACA | TAG | 16 | 79 | All | 0.000003 |
N | 362 | T362I | aCa | aTa | 78 | 79 | B.1.1 | 0.001415 |
N | 362 | T362I | aCA | aTC | 1 | 79 | B.1.1 | 0.000018 |
N | 362 | T362P | Aca | Cca | 39 | 73 | All | 0.000007 |
N | 362 | T362P | AcA | CcT | 16 | 73 | All | 0.000003 |
N | 362 | T362P | AcA | CcC | 12 | 73 | All | 0.000002 |
N | 362 | T362P | AcA | CcG | 6 | 73 | All | 0.000001 |
N | 362 | T362K | aCa | aAa | 73 | 73 | AY.120 | 0.002714 |
N | 362 | T362N | aCA | aAC | 43 | 72 | All | 0.000008 |
N | 362 | T362N | aCA | aAT | 29 | 72 | All | 0.000006 |
N | 362 | T362I | aCa | aTa | 68 | 68 | AY.5 | 0.001404 |
N | 362 | T362L | ACa | TTa | 18 | 66 | All | 0.000003 |
N | 362 | T362L | ACa | CTa | 16 | 66 | All | 0.000003 |
N | 362 | T362L | ACA | CTT | 12 | 66 | All | 0.000002 |
N | 362 | T362L | ACA | TTG | 9 | 66 | All | 0.000002 |
N | 362 | T362L | ACA | CTC | 6 | 66 | All | 0.000001 |
N | 362 | T362L | ACA | CTG | 5 | 66 | All | 0.000001 |
N | 362 | T362I | aCa | aTa | 64 | 64 | AY.40 | 0.061716 |
N | 362 | T362T | acA | acT | 32 | 64 | B.1 | 0.000293 |
N | 362 | T362T | acA | acC | 23 | 64 | B.1 | 0.000211 |
N | 362 | T362T | acA | acG | 9 | 64 | B.1 | 0.000082 |
N | 362 | T362S | Aca | Tca | 27 | 63 | B.1 | 0.000247 |
N | 362 | T362S | AcA | TcC | 12 | 63 | B.1 | 0.00011 |
N | 362 | T362S | AcA | TcT | 10 | 63 | B.1 | 0.000092 |
N | 362 | T362S | AcA | TcG | 6 | 63 | B.1 | 0.000055 |
N | 362 | T362S | aCA | aGC | 6 | 63 | B.1 | 0.000055 |
N | 362 | T362S | aCA | aGT | 2 | 63 | B.1 | 0.000018 |
N | 362 | T362I | aCa | aTa | 61 | 61 | B.1.160 | 0.001902 |
N | 362 | T362I | aCa | aTa | 56 | 56 | AY.119 | 0.001977 |
N | 362 | T362K | aCa | aAa | 52 | 52 | B.1.617.2 | 0.000196 |
N | 362 | T362I | aCa | aTa | 50 | 50 | B.1.429 | 0.001176 |
N | 362 | T362I | aCa | aTa | 48 | 48 | B.1.1.519 | 0.001906 |
N | 362 | T362L | ACa | TTa | 12 | 47 | B.1 | 0.00011 |
N | 362 | T362L | ACa | CTa | 12 | 47 | B.1 | 0.00011 |
N | 362 | T362L | ACA | CTT | 11 | 47 | B.1 | 0.000101 |
N | 362 | T362L | ACA | CTC | 5 | 47 | B.1 | 0.000046 |
N | 362 | T362L | ACA | TTG | 5 | 47 | B.1 | 0.000046 |
N | 362 | T362L | ACA | CTG | 2 | 47 | B.1 | 0.000018 |
N | 362 | T362A | Aca | Gca | 46 | 46 | B.1.1 | 0.000834 |
N | 362 | T362I | aCa | aTa | 46 | 46 | P.7 | 0.200873 |
N | 362 | T362R | aCa | aGa | 21 | 44 | B.1.1.7 | 0.000019 |
N | 362 | T362R | aCA | aGG | 11 | 44 | B.1.1.7 | 0.00001 |
N | 362 | T362R | ACa | CGa | 6 | 44 | B.1.1.7 | 0.000005 |
N | 362 | T362R | ACA | CGG | 5 | 44 | B.1.1.7 | 0.000004 |
N | 362 | T362R | ACA | CGC | 1 | 44 | B.1.1.7 | 0.000001 |
N | 362 | T362Q | ACa | CAa | 32 | 43 | All | 0.000006 |
N | 362 | T362Q | ACA | CAG | 11 | 43 | All | 0.000002 |
N | 362 | T362N | aCA | aAT | 23 | 43 | B.1 | 0.000211 |
N | 362 | T362N | aCA | aAC | 20 | 43 | B.1 | 0.000183 |
N | 362 | T362I | aCa | aTa | 42 | 42 | AY.39 | 0.001038 |
N | 362 | T362T | acA | acG | 26 | 41 | B.1.1.7 | 0.000023 |
N | 362 | T362T | acA | acT | 11 | 41 | B.1.1.7 | 0.00001 |
N | 362 | T362T | acA | acC | 4 | 41 | B.1.1.7 | 0.000004 |
N | 362 | T362I | aCa | aTa | 40 | 40 | AY.31 | 0.740741 |
N | 362 | T362P | Aca | Cca | 18 | 40 | B.1 | 0.000165 |
N | 362 | T362P | AcA | CcT | 12 | 40 | B.1 | 0.00011 |
N | 362 | T362P | AcA | CcC | 8 | 40 | B.1 | 0.000073 |
N | 362 | T362P | AcA | CcG | 2 | 40 | B.1 | 0.000018 |
N | 362 | T362del | ACA | --- | 37 | 37 | All | 0.000007 |
N | 362 | T362I | aCa | aTa | 37 | 37 | B.1.1.284 | 0.003974 |
N | 362 | T362I | aCa | aTa | 37 | 37 | B.1.499 | 0.038866 |
N | 362 | T362I | aCa | aTa | 36 | 36 | AY.4.2 | 0.000781 |
N | 362 | T362X | ACa | TAa | 25 | 36 | B.1 | 0.000229 |
N | 362 | T362X | ACA | TAG | 6 | 36 | B.1 | 0.000055 |
N | 362 | T362X | ACa | TGa | 5 | 36 | B.1 | 0.000046 |
N | 362 | T362I | aCa | aTa | 36 | 36 | B.1.1.408 | 1 |
N | 362 | T362I | aCa | aTa | 35 | 35 | B.1.1.371 | 0.364583 |
N | 362 | T362I | aCa | aTa | 35 | 35 | B.1.177.12 | 0.005309 |
N | 362 | T362I | aCa | aTa | 35 | 35 | B.1.375 | 0.028689 |
N | 362 | T362Y | ACA | TAC | 21 | 34 | All | 0.000004 |
N | 362 | T362Y | ACA | TAT | 13 | 34 | All | 0.000002 |
N | 362 | T362T | acA | acT | 22 | 34 | B.1.617.2 | 0.000083 |
N | 362 | T362T | acA | acG | 10 | 34 | B.1.617.2 | 0.000038 |
N | 362 | T362T | acA | acC | 2 | 34 | B.1.617.2 | 0.000008 |
N | 362 | T362I | aCa | aTa | 31 | 31 | AY.13 | 0.00499 |
N | 362 | T362S | Aca | Tca | 30 | 30 | AY.98 | 0.00237 |
N | 362 | T362I | aCa | aTa | 30 | 30 | B.1.637 | 0.002192 |
N | 362 | T362I | aCa | aTa | 29 | 29 | AY.20 | 0.001127 |
N | 362 | T362X | ACa | TAa | 14 | 29 | B.1.1.7 | 0.000013 |
N | 362 | T362X | ACA | TAG | 8 | 29 | B.1.1.7 | 0.000007 |
N | 362 | T362X | ACa | TGa | 7 | 29 | B.1.1.7 | 0.000006 |
N | 362 | T362I | aCa | aTa | 28 | 28 | AY.100 | 0.001288 |
N | 362 | T362I | aCa | aTa | 28 | 28 | AY.91 | 0.020453 |
N | 362 | T362I | aCa | aTa | 28 | 28 | B.1.214.2 | 0.016787 |
N | 362 | T362H | ACA | CAT | 16 | 27 | All | 0.000003 |
N | 362 | T362H | ACA | CAC | 11 | 27 | All | 0.000002 |
N | 362 | T362I | aCa | aTa | 26 | 26 | AY.54 | 0.002479 |
N | 362 | T362I | aCa | aTa | 26 | 26 | B.1.1.451 | 1 |
N | 362 | T362I | aCa | aTa | 25 | 25 | AY.102 | 0.000663 |
N | 362 | T362T | acA | acT | 16 | 25 | AY.3 | 0.000159 |
N | 362 | T362T | acA | acG | 8 | 25 | AY.3 | 0.00008 |
N | 362 | T362T | acA | acC | 1 | 25 | AY.3 | 0.00001 |
N | 362 | T362T | acA | acT | 25 | 25 | AY.4.2 | 0.000542 |
N | 362 | T362K | aCa | aAa | 25 | 25 | B.1.1.519 | 0.000993 |
N | 362 | T362I | aCa | aTa | 24 | 24 | AY.118 | 0.001504 |
N | 362 | T362K | aCa | aAa | 24 | 24 | B.1.335 | 0.247423 |
N | 362 | T362I | aCa | aTa | 23 | 23 | AY.27 | 0.001489 |
N | 362 | T362S | aCA | aGC | 11 | 22 | B.1.1.7 | 0.00001 |
N | 362 | T362S | Aca | Tca | 8 | 22 | B.1.1.7 | 0.000007 |
N | 362 | T362S | AcA | TcG | 2 | 22 | B.1.1.7 | 0.000002 |
N | 362 | T362S | AcA | TcC | 1 | 22 | B.1.1.7 | 0.000001 |
N | 362 | T362K | aCa | aAa | 22 | 22 | B.1.637 | 0.001608 |
N | 362 | T362Y | ACA | TAC | 11 | 21 | B.1 | 0.000101 |
N | 362 | T362Y | ACA | TAT | 10 | 21 | B.1 | 0.000092 |
N | 362 | T362I | aCa | aTa | 20 | 20 | AY.120 | 0.000744 |
N | 362 | T362T | acA | acG | 20 | 20 | AY.20 | 0.000777 |
N | 362 | T362A | Aca | Gca | 11 | 20 | B.1 | 0.000101 |
N | 362 | T362A | AcA | GcC | 5 | 20 | B.1 | 0.000046 |
N | 362 | T362A | AcA | GcT | 4 | 20 | B.1 | 0.000037 |
N | 362 | T362R | aCa | aGa | 20 | 20 | B.1.1.50 | 0.013578 |
N | 362 | T362K | aCa | aAa | 20 | 20 | B.1.147 | 0.015117 |
N | 362 | T362I | aCa | aTa | 20 | 20 | B.1.177.86 | 0.003669 |
N | 362 | T362I | aCa | aTa | 20 | 20 | B.1.631 | 0.06734 |
N | 362 | T362I | aCa | aTa | 20 | 20 | B.1.96 | 0.377358 |
N | 362 | T362T | acA | acG | 9 | 19 | AY.43 | 0.00004 |
N | 362 | T362T | acA | acT | 9 | 19 | AY.43 | 0.00004 |
N | 362 | T362T | acA | acC | 1 | 19 | AY.43 | 0.000004 |
N | 362 | T362I | aCa | aTa | 19 | 19 | B.1.525 | 0.00215 |
N | 362 | T362I | aCa | aTa | 19 | 19 | Q.3 | 0.002756 |
N | 362 | T362E | ACa | GAa | 16 | 18 | All | 0.000003 |
N | 362 | T362E | ACA | GAG | 2 | 18 | All | 0 |
N | 362 | T362Q | ACa | CAa | 16 | 18 | B.1 | 0.000147 |
N | 362 | T362H | ACA | CAT | 12 | 18 | B.1 | 0.00011 |
N | 362 | T362H | ACA | CAC | 6 | 18 | B.1 | 0.000055 |
N | 362 | T362Q | ACA | CAG | 2 | 18 | B.1 | 0.000018 |
N | 362 | T362I | aCa | aTa | 18 | 18 | B.1.1.434 | 0.006274 |
N | 362 | T362I | aCa | aTa | 18 | 18 | B.1.177.80 | 0.034417 |
N | 362 | T362I | aCa | aTa | 18 | 18 | B.1.240 | 0.00388 |
N | 362 | T362I | aCa | aTa | 18 | 18 | B.1.36 | 0.002626 |
N | 362 | T362I | aCa | aTa | 18 | 18 | B.1.621 | 0.001593 |
N | 362 | T362I | aCa | aTa | 17 | 17 | B.1.494 | 0.586207 |
N | 362 | T362D | ACA | GAC | 12 | 16 | All | 0.000002 |
N | 362 | T362G | ACa | GGa | 8 | 16 | All | 0.000002 |
N | 362 | T362G | ACA | GGC | 7 | 16 | All | 0.000001 |
N | 362 | T362D | ACA | GAT | 4 | 16 | All | 0.000001 |
N | 362 | T362G | ACA | GGG | 1 | 16 | All | 0 |
N | 362 | T362K | aCa | aAa | 15 | 16 | AY.25 | 0.00009 |
N | 362 | T362K | aCA | aAG | 1 | 16 | AY.25 | 0.000006 |
N | 362 | T362I | aCa | aTa | 16 | 16 | AY.30 | 0.006332 |
N | 362 | T362I | aCa | aTa | 16 | 16 | AY.37 | 0.005057 |
N | 362 | T362N | aCA | aAC | 16 | 16 | B.1.1.7 | 0.000014 |
N | 362 | T362Q | ACa | CAa | 9 | 16 | B.1.1.7 | 0.000008 |
N | 362 | T362Q | ACA | CAG | 7 | 16 | B.1.1.7 | 0.000006 |
N | 362 | T362F | ACA | TTC | 8 | 15 | All | 0.000002 |
N | 362 | T362F | ACA | TTT | 7 | 15 | All | 0.000001 |
N | 362 | T362I | aCa | aTa | 15 | 15 | AY.23 | 0.001046 |
N | 362 | T362T | acA | acG | 10 | 15 | AY.4 | 0.000016 |
N | 362 | T362T | acA | acT | 4 | 15 | AY.4 | 0.000006 |
N | 362 | T362T | acA | acC | 1 | 15 | AY.4 | 0.000002 |
N | 362 | T362I | aCa | aTa | 15 | 15 | B.1.1.425 | 0.681818 |
N | 362 | T362K | aCa | aAa | 14 | 15 | B.1.177 | 0.000184 |
N | 362 | T362K | aCA | aAG | 1 | 15 | B.1.177 | 0.000013 |
N | 362 | T362I | aCa | aTa | 15 | 15 | B.1.258 | 0.000998 |
N | 362 | T362I | aCa | aTa | 14 | 14 | AA.1 | 0.101449 |
N | 362 | T362C | ACA | TGC | 10 | 14 | All | 0.000002 |
N | 362 | T362C | ACA | TGT | 4 | 14 | All | 0.000001 |
N | 362 | T362K | aCa | aAa | 14 | 14 | AY.100 | 0.000644 |
N | 362 | T362I | aCa | aTa | 14 | 14 | AY.117 | 0.001183 |
N | 362 | T362I | aCa | aTa | 14 | 14 | AY.33 | 0.000935 |
N | 362 | T362I | aCa | aTa | 13 | 14 | B.1.1.1 | 0.004247 |
N | 362 | T362I | aCA | aTT | 1 | 14 | B.1.1.1 | 0.000327 |
N | 362 | T362I | aCa | aTa | 14 | 14 | P.2 | 0.002613 |
N | 362 | T362M | aCA | aTG | 13 | 13 | All | 0.000002 |
N | 362 | T362V | ACa | GTa | 5 | 13 | All | 0.000001 |
N | 362 | T362V | ACA | GTC | 4 | 13 | All | 0.000001 |
N | 362 | T362V | ACA | GTT | 3 | 13 | All | 0.000001 |
N | 362 | T362V | ACA | GTG | 1 | 13 | All | 0 |
N | 362 | T362I | aCa | aTa | 13 | 13 | AY.16.1 | 0.006109 |
N | 362 | T362F | ACA | TTC | 7 | 13 | B.1 | 0.000064 |
N | 362 | T362R | aCa | aGa | 7 | 13 | B.1 | 0.000064 |
N | 362 | T362F | ACA | TTT | 6 | 13 | B.1 | 0.000055 |
N | 362 | T362R | ACA | CGC | 3 | 13 | B.1 | 0.000027 |
N | 362 | T362R | ACa | CGa | 3 | 13 | B.1 | 0.000027 |
N | 362 | T362I | aCa | aTa | 12 | 12 | AY.45 | 0.00146 |
N | 362 | T362I | aCa | aTa | 12 | 12 | AY.75.1 | 0.002164 |
N | 362 | T362A | Aca | Gca | 11 | 12 | B.1.1.7 | 0.00001 |
N | 362 | T362A | AcA | GcC | 1 | 12 | B.1.1.7 | 0.000001 |
N | 362 | T362I | aCa | aTa | 12 | 12 | B.1.311 | 0.003295 |
N | 362 | T362I | aCa | aTa | 12 | 12 | B.1.466.2 | 0.004695 |
N | 362 | T362I | aCa | aTa | 12 | 12 | B.1.617.1 | 0.001548 |
N | 362 | T362A | Aca | Gca | 12 | 12 | B.1.617.2 | 0.000045 |
N | 362 | T362I | aCa | aTa | 11 | 11 | AY.113 | 0.001566 |
N | 362 | T362T | acA | acG | 10 | 11 | AY.39 | 0.000247 |
N | 362 | T362T | acA | acT | 1 | 11 | AY.39 | 0.000025 |
N | 362 | T362I | aCa | aTa | 11 | 11 | AY.47 | 0.000342 |
N | 362 | T362I | aCa | aTa | 11 | 11 | AY.9 | 0.000744 |
N | 362 | T362K | aCa | aAa | 11 | 11 | B.1.1 | 0.0002 |
N | 362 | T362I | aCa | aTa | 11 | 11 | B.1.438.1 | 0.00118 |
N | 362 | T362I | aCa | aTa | 11 | 11 | C.37 | 0.001277 |
N | 362 | T362I | aCa | aTa | 10 | 10 | AY.16 | 0.003797 |
N | 362 | T362G | ACa | GGa | 5 | 10 | B.1.1.7 | 0.000004 |
N | 362 | T362G | ACA | GGC | 4 | 10 | B.1.1.7 | 0.000004 |
N | 362 | T362G | ACA | GGG | 1 | 10 | B.1.1.7 | 0.000001 |
N | 362 | T362A | Aca | Gca | 10 | 10 | B.1.177 | 0.000132 |
N | 362 | T362K | aCa | aAa | 10 | 10 | B.1.177.73 | 0.005663 |
N | 362 | T362K | aCa | aAa | 10 | 10 | B.1.2 | 0.000088 |
N | 362 | T362I | aCa | aTa | 10 | 10 | B.1.470 | 0.014045 |
N | 362 | T362I | aCa | aTa | 9 | 9 | AY.36 | 0.001334 |
N | 362 | T362I | aCa | aTa | 9 | 9 | AY.41 | 0.002646 |
N | 362 | T362I | aCa | aTa | 9 | 9 | AY.64 | 0.005357 |
N | 362 | T362I | aCa | aTa | 9 | 9 | AY.98 | 0.000711 |
N | 362 | T362I | aCa | aTa | 9 | 9 | AY.98.1 | 0.000436 |
N | 362 | T362D | ACA | GAC | 5 | 9 | B.1 | 0.000046 |
N | 362 | T362D | ACA | GAT | 4 | 9 | B.1 | 0.000037 |
N | 362 | T362V | ACA | GTC | 3 | 9 | B.1 | 0.000027 |
N | 362 | T362V | ACa | GTa | 3 | 9 | B.1 | 0.000027 |
N | 362 | T362V | ACA | GTT | 3 | 9 | B.1 | 0.000027 |
N | 362 | T362I | aCa | aTa | 9 | 9 | B.1.1.518 | 0.056962 |
N | 362 | T362E | ACa | GAa | 7 | 9 | B.1.1.7 | 0.000006 |
N | 362 | T362E | ACA | GAG | 2 | 9 | B.1.1.7 | 0.000002 |
N | 362 | T362I | aCa | aTa | 9 | 9 | B.1.243 | 0.000626 |
N | 362 | T362I | aCa | aTa | 9 | 9 | B.1.351.5 | 0.005396 |
N | 362 | T362A | Aca | Gca | 9 | 9 | P.1.14 | 0.00043 |
N | 362 | T362I | aCa | aTa | 8 | 8 | AY.67 | 0.003714 |
N | 362 | T362del | ACA | --- | 8 | 8 | B.1.1.7 | 0.000007 |
N | 362 | T362P | Aca | Cca | 4 | 8 | B.1.1.7 | 0.000004 |
N | 362 | T362P | AcA | CcG | 3 | 8 | B.1.1.7 | 0.000003 |
N | 362 | T362L | ACA | CTG | 2 | 8 | B.1.1.7 | 0.000002 |
N | 362 | T362L | ACA | TTG | 2 | 8 | B.1.1.7 | 0.000002 |
N | 362 | T362L | ACa | TTa | 2 | 8 | B.1.1.7 | 0.000002 |
N | 362 | T362L | ACa | CTa | 2 | 8 | B.1.1.7 | 0.000002 |
N | 362 | T362P | AcA | CcC | 1 | 8 | B.1.1.7 | 0.000001 |
N | 362 | T362I | aCa | aTa | 8 | 8 | B.1.160.31 | 0.064516 |
N | 362 | T362K | aCa | aAa | 8 | 8 | B.1.621 | 0.000708 |
N | 362 | T362I | aCa | aTa | 8 | 8 | C.36.3 | 0.004538 |
N | 362 | T362K | aCa | aAa | 7 | 8 | P.1 | 0.00011 |
N | 362 | T362K | aCA | aAG | 1 | 8 | P.1 | 0.000016 |
N | 362 | T362I | aCa | aTa | 7 | 7 | AY.3.1 | 0.000597 |
N | 362 | T362K | aCa | aAa | 7 | 7 | AY.3.1 | 0.000597 |
N | 362 | T362I | aCa | aTa | 7 | 7 | AY.4.5 | 0.000752 |
N | 362 | T362A | Aca | Gca | 7 | 7 | AY.44 | 0.000043 |
N | 362 | T362I | aCa | aTa | 7 | 7 | AY.59 | 0.003708 |
N | 362 | T362I | aCa | aTa | 7 | 7 | AY.70 | 0.00146 |
N | 362 | T362I | aCa | aTa | 7 | 7 | AY.84 | 0.003062 |
N | 362 | T362I | aCa | aTa | 7 | 7 | AY.9.2 | 0.000257 |
N | 362 | T362E | ACa | GAa | 7 | 7 | B.1 | 0.000064 |
N | 362 | T362I | aCa | aTa | 7 | 7 | B.1.1.214 | 0.000388 |
N | 362 | T362T | acA | acC | 7 | 7 | B.1.35 | 0.059322 |
N | 362 | T362I | aCa | aTa | 7 | 7 | B.1.469 | 0.025271 |
N | 362 | T362K | aCa | aAa | 6 | 6 | AY.103 | 0.000037 |
N | 362 | T362I | aCa | aTa | 6 | 6 | AY.114 | 0.001387 |
N | 362 | T362I | aCa | aTa | 6 | 6 | AY.121 | 0.000812 |
N | 362 | T362A | Aca | Gca | 6 | 6 | AY.25 | 0.000036 |
N | 362 | T362I | aCa | aTa | 6 | 6 | AY.46.6 | 0.000433 |
N | 362 | T362I | aCa | aTa | 6 | 6 | AY.5.3 | 0.002024 |
N | 362 | T362I | aCa | aTa | 6 | 6 | AY.58 | 0.005445 |
N | 362 | T362K | aCa | aAa | 6 | 6 | AY.6 | 0.000247 |
N | 362 | T362I | aCa | aTa | 6 | 6 | AY.61 | 0.000629 |
N | 362 | T362I | aCa | aTa | 6 | 6 | B | 0.000767 |
N | 362 | T362M | aCA | aTG | 6 | 6 | B.1 | 0.000055 |
N | 362 | T362C | ACA | TGC | 4 | 6 | B.1 | 0.000037 |
N | 362 | T362C | ACA | TGT | 2 | 6 | B.1 | 0.000018 |
N | 362 | T362I | aCa | aTa | 6 | 6 | B.1.1.157 | 0.005479 |
N | 362 | T362D | ACA | GAC | 6 | 6 | B.1.1.7 | 0.000005 |
N | 362 | T362del | ACA | --- | 6 | 6 | B.1.177 | 0.000079 |
N | 362 | T362S | Aca | Tca | 3 | 6 | B.1.177 | 0.00004 |
N | 362 | T362S | AcA | TcC | 1 | 6 | B.1.177 | 0.000013 |
N | 362 | T362S | AcA | TcT | 1 | 6 | B.1.177 | 0.000013 |
N | 362 | T362S | AcA | TcG | 1 | 6 | B.1.177 | 0.000013 |
N | 362 | T362I | aCa | aTa | 6 | 6 | B.1.177.20 | 0.009105 |
N | 362 | T362I | aCa | aTa | 6 | 6 | B.1.177.43 | 0.008863 |
N | 362 | T362R | aCa | aGa | 6 | 6 | B.1.243 | 0.000418 |
N | 362 | T362I | aCa | aTa | 6 | 6 | B.1.628 | 0.002114 |
N | 362 | T362W | ACA | TGG | 5 | 5 | All | 0.000001 |
N | 362 | T362I | aCa | aTa | 5 | 5 | AY.106 | 0.001674 |
N | 362 | T362I | aCa | aTa | 5 | 5 | AY.111 | 0.000916 |
N | 362 | T362I | aCa | aTa | 5 | 5 | AY.12 | 0.00158 |
N | 362 | T362K | aCa | aAa | 5 | 5 | AY.3 | 0.00005 |
N | 362 | T362I | aCa | aTa | 5 | 5 | AY.42 | 0.000201 |
N | 362 | T362K | aCa | aAa | 5 | 5 | AY.43 | 0.000022 |
N | 362 | T362I | aCa | aTa | 5 | 5 | AY.53 | 0.001438 |
N | 362 | T362I | aCa | aTa | 5 | 5 | AY.55 | 0.004587 |
N | 362 | T362T | acA | acT | 2 | 5 | B.1.1 | 0.000036 |
N | 362 | T362T | acA | acC | 2 | 5 | B.1.1 | 0.000036 |
N | 362 | T362T | acA | acG | 1 | 5 | B.1.1 | 0.000018 |
N | 362 | T362I | aCa | aTa | 5 | 5 | B.1.1.28 | 0.001556 |
N | 362 | T362Y | ACA | TAC | 5 | 5 | B.1.1.7 | 0.000004 |
N | 362 | T362W | ACA | TGG | 5 | 5 | B.1.1.7 | 0.000004 |
N | 362 | T362I | aCa | aTa | 5 | 5 | B.1.110.3 | 0.003592 |
N | 362 | T362T | acA | acG | 3 | 5 | B.1.177 | 0.00004 |
N | 362 | T362X | ACa | TAa | 3 | 5 | B.1.177 | 0.00004 |
N | 362 | T362L | ACA | CTG | 1 | 5 | B.1.177 | 0.000013 |
N | 362 | T362L | ACA | CTT | 1 | 5 | B.1.177 | 0.000013 |
N | 362 | T362L | ACa | CTa | 1 | 5 | B.1.177 | 0.000013 |
N | 362 | T362X | ACa | TGa | 1 | 5 | B.1.177 | 0.000013 |
N | 362 | T362L | ACA | TTG | 1 | 5 | B.1.177 | 0.000013 |
N | 362 | T362T | acA | acT | 1 | 5 | B.1.177 | 0.000013 |
N | 362 | T362T | acA | acC | 1 | 5 | B.1.177 | 0.000013 |
N | 362 | T362L | ACa | TTa | 1 | 5 | B.1.177 | 0.000013 |
N | 362 | T362X | ACA | TAG | 1 | 5 | B.1.177 | 0.000013 |
N | 362 | T362R | aCa | aGa | 2 | 5 | B.1.2 | 0.000018 |
N | 362 | T362R | ACA | CGT | 1 | 5 | B.1.2 | 0.000009 |
N | 362 | T362S | AcA | TcC | 1 | 5 | B.1.2 | 0.000009 |
N | 362 | T362R | ACa | CGa | 1 | 5 | B.1.2 | 0.000009 |
N | 362 | T362S | aCA | aGC | 1 | 5 | B.1.2 | 0.000009 |
N | 362 | T362S | AcA | TcT | 1 | 5 | B.1.2 | 0.000009 |
N | 362 | T362R | ACA | CGC | 1 | 5 | B.1.2 | 0.000009 |
N | 362 | T362S | Aca | Tca | 1 | 5 | B.1.2 | 0.000009 |
N | 362 | T362S | aCA | aGT | 1 | 5 | B.1.2 | 0.000009 |
N | 362 | T362K | aCa | aAa | 5 | 5 | B.1.221 | 0.000355 |
N | 362 | T362S | AcA | TcC | 1 | 5 | B.1.221 | 0.000071 |
N | 362 | T362S | AcA | TcT | 1 | 5 | B.1.221 | 0.000071 |
N | 362 | T362S | aCA | aGT | 1 | 5 | B.1.221 | 0.000071 |
N | 362 | T362S | aCA | aGC | 1 | 5 | B.1.221 | 0.000071 |
N | 362 | T362S | Aca | Tca | 1 | 5 | B.1.221 | 0.000071 |
N | 362 | T362I | aCa | aTa | 5 | 5 | B.1.234 | 0.00066 |
N | 362 | T362I | aCa | aTa | 5 | 5 | B.1.36.8 | 0.005 |
N | 362 | T362I | aCa | aTa | 5 | 5 | B.1.382 | 0.044643 |
N | 362 | T362T | acA | acT | 5 | 5 | B.1.459 | 0.020408 |
N | 362 | T362I | aCa | aTa | 5 | 5 | B.1.497 | 0.001574 |
N | 362 | T362I | aCa | aTa | 5 | 5 | Q.1 | 0.000632 |
N | 362 | T362I | aCa | aTa | 5 | 5 | Q.8 | 0.000825 |
N | 362 | T362I | aCa | aTa | 4 | 4 | A.23.1 | 0.002817 |
N | 362 | T362T | acA | acG | 2 | 4 | AY.103 | 0.000012 |
N | 362 | T362T | acA | acT | 2 | 4 | AY.103 | 0.000012 |
N | 362 | T362I | aCa | aTa | 4 | 4 | AY.104 | 0.007937 |
N | 362 | T362K | aCa | aAa | 4 | 4 | AY.118 | 0.000251 |
N | 362 | T362R | aCa | aGa | 1 | 4 | AY.25 | 0.000006 |
N | 362 | T362R | ACA | CGG | 1 | 4 | AY.25 | 0.000006 |
N | 362 | T362R | ACa | CGa | 1 | 4 | AY.25 | 0.000006 |
N | 362 | T362R | aCA | aGG | 1 | 4 | AY.25 | 0.000006 |
N | 362 | T362I | aCa | aTa | 4 | 4 | AY.34 | 0.000388 |
N | 362 | T362K | aCa | aAa | 4 | 4 | AY.44 | 0.000024 |
N | 362 | T362I | aCa | aTa | 4 | 4 | AY.5.4 | 0.001107 |
N | 362 | T362G | ACA | GGC | 2 | 4 | B.1 | 0.000018 |
N | 362 | T362G | ACa | GGa | 2 | 4 | B.1 | 0.000018 |
N | 362 | T362del | ACA | --- | 4 | 4 | B.1.1 | 0.000073 |
N | 362 | T362I | aCa | aTa | 4 | 4 | B.1.177.32 | 0.005398 |
N | 362 | T362I | aCa | aTa | 4 | 4 | B.1.177.76 | 0.009975 |
N | 362 | T362P | Aca | Cca | 2 | 4 | B.1.2 | 0.000018 |
N | 362 | T362P | AcA | CcC | 1 | 4 | B.1.2 | 0.000009 |
N | 362 | T362P | AcA | CcT | 1 | 4 | B.1.2 | 0.000009 |
N | 362 | T362R | ACA | CGC | 1 | 4 | B.1.221 | 0.000071 |
N | 362 | T362R | aCa | aGa | 1 | 4 | B.1.221 | 0.000071 |
N | 362 | T362R | ACa | CGa | 1 | 4 | B.1.221 | 0.000071 |
N | 362 | T362R | ACA | CGT | 1 | 4 | B.1.221 | 0.000071 |
N | 362 | T362K | aCa | aAa | 4 | 4 | B.1.258 | 0.000266 |
N | 362 | T362I | aCa | aTa | 4 | 4 | B.1.258.17 | 0.000416 |
N | 362 | T362K | aCa | aAa | 4 | 4 | B.1.258.17 | 0.000416 |
N | 362 | T362I | aCa | aTa | 4 | 4 | B.1.561 | 0.001588 |
N | 362 | T362I | aCa | aTa | 4 | 4 | D.2 | 0.0003 |
N | 362 | T362I | aCa | aTa | 4 | 4 | P.1.14 | 0.000191 |
N | 362 | T362I | aCa | aTa | 4 | 4 | P.1.15 | 0.000929 |
N | 362 | T362I | aCa | aTa | 4 | 4 | P.1.7 | 0.001277 |
N | 362 | T362del1 | aCa | a-a | 3 | 3 | All | 0.000001 |
N | 362 | T362A | Aca | Gca | 3 | 3 | AY.100 | 0.000138 |
N | 362 | T362I | aCa | aTa | 3 | 3 | AY.109 | 0.002219 |
N | 362 | T362I | aCa | aTa | 3 | 3 | AY.110 | 0.000338 |
N | 362 | T362I | aCa | aTa | 3 | 3 | AY.116 | 0.00086 |
N | 362 | T362T | acA | acC | 3 | 3 | AY.119 | 0.000106 |
N | 362 | T362I | aCa | aTa | 3 | 3 | AY.19 | 0.003421 |
N | 362 | T362I | aCa | aTa | 3 | 3 | AY.24 | 0.001293 |
N | 362 | T362I | aCa | aTa | 3 | 3 | AY.38 | 0.001498 |
N | 362 | T362K | aCa | aAa | 3 | 3 | AY.39 | 0.000074 |
N | 362 | T362A | Aca | Gca | 3 | 3 | AY.39.1 | 0.000119 |
N | 362 | T362A | Aca | Gca | 3 | 3 | AY.4 | 0.000005 |
N | 362 | T362T | acA | acG | 2 | 3 | AY.44 | 0.000012 |
N | 362 | T362T | acA | acT | 1 | 3 | AY.44 | 0.000006 |
N | 362 | T362I | aCa | aTa | 3 | 3 | AY.62 | 0.001307 |
N | 362 | T362I | aCa | aTa | 3 | 3 | AY.73 | 0.001996 |
N | 362 | T362I | aCa | aTa | 3 | 3 | AY.75 | 0.000168 |
N | 362 | T362T | acA | acT | 2 | 3 | AY.75 | 0.000112 |
N | 362 | T362T | acA | acG | 1 | 3 | AY.75 | 0.000056 |
N | 362 | T362I | aCa | aTa | 3 | 3 | AY.86 | 0.00249 |
N | 362 | T362R | aCa | aGa | 3 | 3 | AY.9.2 | 0.00011 |
N | 362 | T362I | aCa | aTa | 3 | 3 | AY.99.2 | 0.000276 |
N | 362 | T362I | aCa | aTa | 3 | 3 | B.1.1.216 | 0.002671 |
N | 362 | T362A | Aca | Gca | 3 | 3 | B.1.1.306 | 0.001315 |
N | 362 | T362I | aCa | aTa | 3 | 3 | B.1.1.311 | 0.001074 |
N | 362 | T362I | aCa | aTa | 3 | 3 | B.1.1.317 | 0.001235 |
N | 362 | T362M | aCA | aTG | 3 | 3 | B.1.1.7 | 0.000003 |
N | 362 | T362C | ACA | TGC | 3 | 3 | B.1.1.7 | 0.000003 |
N | 362 | T362V | ACa | GTa | 1 | 3 | B.1.1.7 | 0.000001 |
N | 362 | T362V | ACA | GTG | 1 | 3 | B.1.1.7 | 0.000001 |
N | 362 | T362V | ACA | GTC | 1 | 3 | B.1.1.7 | 0.000001 |
N | 362 | T362A | Aca | Gca | 2 | 3 | B.1.160 | 0.000062 |
N | 362 | T362S | AcA | TcC | 1 | 3 | B.1.160 | 0.000031 |
N | 362 | T362S | aCA | aGC | 1 | 3 | B.1.160 | 0.000031 |
N | 362 | T362A | AcA | GcC | 1 | 3 | B.1.160 | 0.000031 |
N | 362 | T362S | Aca | Tca | 1 | 3 | B.1.160 | 0.000031 |
N | 362 | T362P | AcA | CcT | 1 | 3 | B.1.177 | 0.000013 |
N | 362 | T362P | AcA | CcG | 1 | 3 | B.1.177 | 0.000013 |
N | 362 | T362P | Aca | Cca | 1 | 3 | B.1.177 | 0.000013 |
N | 362 | T362K | aCa | aAa | 3 | 3 | B.1.177.56 | 0.002003 |
N | 362 | T362I | aCa | aTa | 3 | 3 | B.1.177.60 | 0.000655 |
N | 362 | T362I | aCa | aTa | 3 | 3 | B.1.177.77 | 0.002179 |
N | 362 | T362T | acA | acC | 1 | 3 | B.1.2 | 0.000009 |
N | 362 | T362T | acA | acT | 1 | 3 | B.1.2 | 0.000009 |
N | 362 | T362T | acA | acG | 1 | 3 | B.1.2 | 0.000009 |
N | 362 | T362I | aCa | aTa | 3 | 3 | B.1.210 | 0.006397 |
N | 362 | T362P | AcA | CcC | 1 | 3 | B.1.221 | 0.000071 |
N | 362 | T362P | Aca | Cca | 1 | 3 | B.1.221 | 0.000071 |
N | 362 | T362P | AcA | CcT | 1 | 3 | B.1.221 | 0.000071 |
N | 362 | T362K | aCa | aAa | 3 | 3 | B.1.311 | 0.000824 |
N | 362 | T362I | aCa | aTa | 3 | 3 | B.1.329 | 0.001823 |
N | 362 | T362I | aCa | aTa | 3 | 3 | B.1.346 | 0.003932 |
N | 362 | T362K | aCa | aAa | 3 | 3 | B.1.351 | 0.000089 |
N | 362 | T362I | aCa | aTa | 3 | 3 | B.1.36.10 | 0.014354 |
N | 362 | T362I | aCa | aTa | 3 | 3 | B.1.36.17 | 0.001482 |
N | 362 | T362I | aCa | aTa | 3 | 3 | B.1.36.18 | 0.001261 |
N | 362 | T362I | aCa | aTa | 3 | 3 | B.1.36.29 | 0.001552 |
N | 362 | T362P | Aca | Cca | 3 | 3 | B.1.429 | 0.000071 |
N | 362 | T362L | ACA | CTC | 1 | 3 | B.1.437 | 0.020833 |
N | 362 | T362L | ACa | TTa | 1 | 3 | B.1.437 | 0.020833 |
N | 362 | T362L | ACa | CTa | 1 | 3 | B.1.437 | 0.020833 |
N | 362 | T362I | aCa | aTa | 2 | 3 | B.1.459 | 0.008163 |
N | 362 | T362I | aCA | aTT | 1 | 3 | B.1.459 | 0.004082 |
N | 362 | T362I | aCa | aTa | 3 | 3 | B.1.595 | 0.000783 |
N | 362 | T362I | aCa | aTa | 3 | 3 | B.3 | 0.002492 |
N | 362 | T362I | aCa | aTa | 3 | 3 | B.52 | 0.030303 |
N | 362 | T362I | aCa | aTa | 3 | 3 | P.1.12 | 0.001452 |
N | 362 | T362A | Aca | Gca | 3 | 3 | Q.1 | 0.000379 |
N | 362 | T362del | ACA | --- | 2 | 2 | 0.111111 | |
N | 362 | T362P | Aca | Cca | 2 | 2 | 0.111111 | |
N | 362 | T362I | aCa | aTa | 2 | 2 | A.1 | 0.000564 |
N | 362 | T362I | aCa | aTa | 2 | 2 | A.2.5 | 0.000998 |
N | 362 | T362I | aCa | aTa | 2 | 2 | AY.101 | 0.000981 |
N | 362 | T362K | aCa | aAa | 2 | 2 | AY.102 | 0.000053 |
N | 362 | T362T | acA | acC | 1 | 2 | AY.102 | 0.000027 |
N | 362 | T362T | acA | acT | 1 | 2 | AY.102 | 0.000027 |
N | 362 | T362T | acA | acT | 2 | 2 | AY.120 | 0.000074 |
N | 362 | T362I | aCa | aTa | 2 | 2 | AY.120.2.1 | 0.000997 |
N | 362 | T362A | Aca | Gca | 2 | 2 | AY.20 | 0.000078 |
N | 362 | T362K | aCa | aAa | 2 | 2 | AY.23.1 | 0.000835 |
N | 362 | T362Q | ACa | CAa | 1 | 2 | AY.25 | 0.000006 |
N | 362 | T362Q | ACA | CAG | 1 | 2 | AY.25 | 0.000006 |
N | 362 | T362A | Aca | Gca | 2 | 2 | AY.3 | 0.00002 |
N | 362 | T362K | aCa | aAa | 2 | 2 | AY.36 | 0.000296 |
N | 362 | T362K | aCa | aAa | 2 | 2 | AY.37 | 0.000632 |
N | 362 | T362K | aCa | aAa | 2 | 2 | AY.42 | 0.00008 |
N | 362 | T362I | aCa | aTa | 2 | 2 | AY.46 | 0.000208 |
N | 362 | T362K | aCa | aAa | 2 | 2 | AY.46.6 | 0.000144 |
N | 362 | T362T | acA | acT | 2 | 2 | AY.47 | 0.000062 |
N | 362 | T362I | aCa | aTa | 2 | 2 | AY.6 | 0.000082 |
N | 362 | T362I | aCa | aTa | 2 | 2 | AY.68 | 0.000547 |
N | 362 | T362I | aCa | aTa | 2 | 2 | AY.69 | 0.000373 |
N | 362 | T362I | aCa | aTa | 2 | 2 | AY.7.1 | 0.000225 |
N | 362 | T362I | aCa | aTa | 2 | 2 | AY.71 | 0.00095 |
N | 362 | T362T | acA | acG | 2 | 2 | AY.75.1 | 0.000361 |
N | 362 | T362I | aCa | aTa | 2 | 2 | AY.9.1 | 0.000167 |
N | 362 | T362K | aCa | aAa | 2 | 2 | AY.92 | 0.000575 |
N | 362 | T362I | aCa | aTa | 2 | 2 | AY.92 | 0.000575 |
N | 362 | T362I | aCa | aTa | 2 | 2 | AY.94 | 0.000885 |
N | 362 | T362I | aCa | aTa | 2 | 2 | AY.95 | 0.001522 |
N | 362 | T362K | aCa | aAa | 2 | 2 | AZ.2.1 | 0.01626 |
N | 362 | T362del | ACA | --- | 2 | 2 | B.1 | 0.000018 |
N | 362 | T362P | AcA | CcT | 1 | 2 | B.1.1 | 0.000018 |
N | 362 | T362P | Aca | Cca | 1 | 2 | B.1.1 | 0.000018 |
N | 362 | T362N | aCA | aAT | 1 | 2 | B.1.1 | 0.000018 |
N | 362 | T362N | aCA | aAC | 1 | 2 | B.1.1 | 0.000018 |
N | 362 | T362A | Aca | Gca | 2 | 2 | B.1.1.1 | 0.000653 |
N | 362 | T362I | aCa | aTa | 2 | 2 | B.1.1.153 | 0.002191 |
N | 362 | T362K | aCa | aAa | 2 | 2 | B.1.1.214 | 0.000111 |
N | 362 | T362I | aCa | aTa | 2 | 2 | B.1.1.222 | 0.000408 |
N | 362 | T362I | aCa | aTa | 2 | 2 | B.1.1.294 | 0.002532 |
N | 362 | T362T | acA | acT | 2 | 2 | B.1.1.306 | 0.000877 |
N | 362 | T362I | aCa | aTa | 2 | 2 | B.1.1.397 | 0.004505 |
N | 362 | T362I | aCa | aTa | 2 | 2 | B.1.1.432 | 0.002532 |
N | 362 | T362I | aCa | aTa | 2 | 2 | B.1.1.50 | 0.001358 |
N | 362 | T362H | ACA | CAC | 2 | 2 | B.1.1.7 | 0.000002 |
N | 362 | T362I | aCa | aTa | 2 | 2 | B.1.111 | 0.00235 |
N | 362 | T362I | aCa | aTa | 2 | 2 | B.1.126 | 0.002551 |
N | 362 | T362I | aCa | aTa | 2 | 2 | B.1.128 | 0.001271 |
N | 362 | T362X | ACa | TAa | 1 | 2 | B.1.160 | 0.000031 |
N | 362 | T362X | ACa | TGa | 1 | 2 | B.1.160 | 0.000031 |
N | 362 | T362G | ACA | GGC | 1 | 2 | B.1.160 | 0.000031 |
N | 362 | T362G | ACa | GGa | 1 | 2 | B.1.160 | 0.000031 |
N | 362 | T362I | aCa | aTa | 2 | 2 | B.1.170 | 0.008621 |
N | 362 | T362Q | ACA | CAG | 1 | 2 | B.1.177 | 0.000013 |
N | 362 | T362Y | ACA | TAC | 1 | 2 | B.1.177 | 0.000013 |
N | 362 | T362N | aCA | aAC | 1 | 2 | B.1.177 | 0.000013 |
N | 362 | T362Q | ACa | CAa | 1 | 2 | B.1.177 | 0.000013 |
N | 362 | T362Y | ACA | TAT | 1 | 2 | B.1.177 | 0.000013 |
N | 362 | T362N | aCA | aAT | 1 | 2 | B.1.177 | 0.000013 |
N | 362 | T362K | aCa | aAa | 2 | 2 | B.1.177.21 | 0.000153 |
N | 362 | T362I | aCa | aTa | 2 | 2 | B.1.177.52 | 0.003515 |
N | 362 | T362I | aCa | aTa | 2 | 2 | B.1.177.56 | 0.001335 |
N | 362 | T362I | aCa | aTa | 2 | 2 | B.1.177.58 | 0.002663 |
N | 362 | T362I | aCa | aTa | 2 | 2 | B.1.177.79 | 0.004684 |
N | 362 | T362A | Aca | Gca | 2 | 2 | B.1.199 | 0.008264 |
N | 362 | T362A | Aca | Gca | 2 | 2 | B.1.2 | 0.000018 |
N | 362 | T362H | ACA | CAC | 1 | 2 | B.1.2 | 0.000009 |
N | 362 | T362C | ACA | TGC | 1 | 2 | B.1.2 | 0.000009 |
N | 362 | T362N | aCA | aAT | 1 | 2 | B.1.2 | 0.000009 |
N | 362 | T362Y | ACA | TAT | 1 | 2 | B.1.2 | 0.000009 |
N | 362 | T362H | ACA | CAT | 1 | 2 | B.1.2 | 0.000009 |
N | 362 | T362N | aCA | aAC | 1 | 2 | B.1.2 | 0.000009 |
N | 362 | T362X | ACa | TGa | 1 | 2 | B.1.2 | 0.000009 |
N | 362 | T362Y | ACA | TAC | 1 | 2 | B.1.2 | 0.000009 |
N | 362 | T362C | ACA | TGT | 1 | 2 | B.1.2 | 0.000009 |
N | 362 | T362X | ACa | TAa | 1 | 2 | B.1.2 | 0.000009 |
N | 362 | T362I | aCa | aTa | 2 | 2 | B.1.214 | 0.007326 |
N | 362 | T362N | aCA | aAT | 1 | 2 | B.1.221 | 0.000071 |
N | 362 | T362H | ACA | CAT | 1 | 2 | B.1.221 | 0.000071 |
N | 362 | T362C | ACA | TGT | 1 | 2 | B.1.221 | 0.000071 |
N | 362 | T362C | ACA | TGC | 1 | 2 | B.1.221 | 0.000071 |
N | 362 | T362X | ACa | TGa | 1 | 2 | B.1.221 | 0.000071 |
N | 362 | T362Y | ACA | TAC | 1 | 2 | B.1.221 | 0.000071 |
N | 362 | T362H | ACA | CAC | 1 | 2 | B.1.221 | 0.000071 |
N | 362 | T362N | aCA | aAC | 1 | 2 | B.1.221 | 0.000071 |
N | 362 | T362Y | ACA | TAT | 1 | 2 | B.1.221 | 0.000071 |
N | 362 | T362X | ACa | TAa | 1 | 2 | B.1.221 | 0.000071 |
N | 362 | T362T | acA | acT | 1 | 2 | B.1.221 | 0.000071 |
N | 362 | T362T | acA | acC | 1 | 2 | B.1.221 | 0.000071 |
N | 362 | T362I | aCa | aTa | 2 | 2 | B.1.241 | 0.001623 |
N | 362 | T362K | aCa | aAa | 2 | 2 | B.1.243 | 0.000139 |
N | 362 | T362T | acA | acT | 1 | 2 | B.1.258 | 0.000067 |
N | 362 | T362T | acA | acG | 1 | 2 | B.1.258 | 0.000067 |
N | 362 | T362T | acA | acG | 2 | 2 | B.1.351 | 0.000059 |
N | 362 | T362I | aCa | aTa | 2 | 2 | B.1.369 | 0.00057 |
N | 362 | T362T | acA | acC | 2 | 2 | B.1.395 | 0.014085 |
N | 362 | T362I | aCa | aTa | 2 | 2 | B.1.398 | 0.005952 |
N | 362 | T362I | aCa | aTa | 2 | 2 | B.1.411 | 0.007407 |
N | 362 | T362T | acA | acT | 1 | 2 | B.1.427 | 0.00005 |
N | 362 | T362T | acA | acG | 1 | 2 | B.1.427 | 0.00005 |
N | 362 | T362I | aCa | aTa | 2 | 2 | B.1.428 | 0.002041 |
N | 362 | T362S | AcA | TcC | 1 | 2 | B.1.437 | 0.020833 |
N | 362 | T362S | Aca | Tca | 1 | 2 | B.1.437 | 0.020833 |
N | 362 | T362I | aCA | aTC | 1 | 2 | B.1.437 | 0.020833 |
N | 362 | T362P | AcA | CcC | 1 | 2 | B.1.437 | 0.020833 |
N | 362 | T362I | aCa | aTa | 1 | 2 | B.1.437 | 0.020833 |
N | 362 | T362P | Aca | Cca | 1 | 2 | B.1.437 | 0.020833 |
N | 362 | T362I | aCa | aTa | 2 | 2 | B.1.456 | 0.006536 |
N | 362 | T362K | aCa | aAa | 2 | 2 | B.1.526 | 0.000047 |
N | 362 | T362K | aCa | aAa | 2 | 2 | B.1.561 | 0.000794 |
N | 362 | T362A | Aca | Gca | 2 | 2 | B.1.596 | 0.000174 |
N | 362 | T362I | aCa | aTa | 2 | 2 | B.1.601 | 0.060606 |
N | 362 | T362M | aCA | aTG | 2 | 2 | B.1.617.2 | 0.000008 |
N | 362 | T362del1 | aCa | a-a | 2 | 2 | B.1.617.2 | 0.000008 |
N | 362 | T362A | Aca | Gca | 2 | 2 | B.1.621 | 0.000177 |
N | 362 | T362K | aCa | aAa | 2 | 2 | B.1.623 | 0.001073 |
N | 362 | T362I | aCa | aTa | 2 | 2 | C.26 | 0.014706 |
N | 362 | T362K | aCa | aAa | 2 | 2 | C.36 | 0.001821 |
N | 362 | T362K | aCa | aAa | 2 | 2 | C.37 | 0.000232 |
N | 362 | T362A | Aca | Gca | 2 | 2 | P.1 | 0.000032 |
N | 362 | T362del | ACA | --- | 2 | 2 | P.1 | 0.000032 |
N | 362 | T362X | ACa | TAa | 1 | 2 | P.1 | 0.000016 |
N | 362 | T362X | ACA | TAG | 1 | 2 | P.1 | 0.000016 |
N | 362 | T362L | ACa | TTa | 1 | 2 | P.1 | 0.000016 |
N | 362 | T362L | ACA | TTG | 1 | 2 | P.1 | 0.000016 |
N | 362 | T362K | aCa | aAa | 2 | 2 | P.1.14 | 0.000096 |
N | 362 | T362I | aCa | aTa | 2 | 2 | S.1 | 0.009901 |
N | 362 | T362I | aCa | aTa | 1 | 1 | A | 0.000387 |
N | 362 | T362K | aCa | aAa | 1 | 1 | A.2.5 | 0.000499 |
N | 362 | T362K | aCa | aAa | 1 | 1 | A.23.1 | 0.000704 |
N | 362 | T362R | aCa | aGa | 1 | 1 | A.27 | 0.001656 |
N | 362 | T362I | aCa | aTa | 1 | 1 | A.29 | 0.005319 |
N | 362 | T362del2 | ACA | M-- | 1 | 1 | All | 0 |
N | 362 | T362S | Aca | Tca | 1 | 1 | AY.102 | 0.000027 |
N | 362 | T362I | aCa | aTa | 1 | 1 | AY.105 | 0.000643 |
N | 362 | T362I | aCa | aTa | 1 | 1 | AY.108 | 0.001103 |
N | 362 | T362R | aCa | aGa | 1 | 1 | AY.111 | 0.000183 |
N | 362 | T362K | aCa | aAa | 1 | 1 | AY.113 | 0.000142 |
N | 362 | T362del | ACA | --- | 1 | 1 | AY.114 | 0.000231 |
N | 362 | T362I | aCa | aTa | 1 | 1 | AY.116.1 | 0.000311 |
N | 362 | T362A | Aca | Gca | 1 | 1 | AY.120 | 0.000037 |
N | 362 | T362I | aCa | aTa | 1 | 1 | AY.120.1 | 0.000321 |
N | 362 | T362T | acA | acG | 1 | 1 | AY.121 | 0.000135 |
N | 362 | T362I | aCa | aTa | 1 | 1 | AY.14 | 0.000088 |
N | 362 | T362K | aCa | aAa | 1 | 1 | AY.14 | 0.000088 |
N | 362 | T362I | aCa | aTa | 1 | 1 | AY.23.1 | 0.000417 |
N | 362 | T362T | acA | acT | 1 | 1 | AY.25 | 0.000006 |
N | 362 | T362R | aCa | aGa | 1 | 1 | AY.26 | 0.000028 |
N | 362 | T362del | ACA | --- | 1 | 1 | AY.26 | 0.000028 |
N | 362 | T362T | acA | acG | 1 | 1 | AY.29 | 0.000016 |
N | 362 | T362I | aCa | aTa | 1 | 1 | AY.29.1 | 0.000221 |
N | 362 | T362A | Aca | Gca | 1 | 1 | AY.3.1 | 0.000085 |
N | 362 | T362K | aCa | aAa | 1 | 1 | AY.32 | 0.000532 |
N | 362 | T362I | aCa | aTa | 1 | 1 | AY.32 | 0.000532 |
N | 362 | T362T | acA | acT | 1 | 1 | AY.34 | 0.000097 |
N | 362 | T362S | Aca | Tca | 1 | 1 | AY.4 | 0.000002 |
N | 362 | T362I | aCa | aTa | 1 | 1 | AY.4.4 | 0.000409 |
N | 362 | T362T | acA | acG | 1 | 1 | AY.4.5 | 0.000107 |
N | 362 | T362K | aCa | aAa | 1 | 1 | AY.4.5 | 0.000107 |
N | 362 | T362K | aCa | aAa | 1 | 1 | AY.41 | 0.000294 |
N | 362 | T362R | aCa | aGa | 1 | 1 | AY.42 | 0.00004 |
N | 362 | T362del | ACA | --- | 1 | 1 | AY.43 | 0.000004 |
N | 362 | T362P | Aca | Cca | 1 | 1 | AY.44 | 0.000006 |
N | 362 | T362K | aCa | aAa | 1 | 1 | AY.45 | 0.000122 |
N | 362 | T362R | aCa | aGa | 1 | 1 | AY.45 | 0.000122 |
N | 362 | T362R | aCa | aGa | 1 | 1 | AY.46 | 0.000104 |
N | 362 | T362P | Aca | Cca | 1 | 1 | AY.46.1 | 0.001027 |
N | 362 | T362K | aCa | aAa | 1 | 1 | AY.47 | 0.000031 |
N | 362 | T362I | aCa | aTa | 1 | 1 | AY.49 | 0.003195 |
N | 362 | T362A | Aca | Gca | 1 | 1 | AY.5 | 0.000021 |
N | 362 | T362T | acA | acC | 1 | 1 | AY.5 | 0.000021 |
N | 362 | T362K | aCa | aAa | 1 | 1 | AY.5 | 0.000021 |
N | 362 | T362T | acA | acC | 1 | 1 | AY.5.4 | 0.000277 |
N | 362 | T362I | aCa | aTa | 1 | 1 | AY.51 | 0.000909 |
N | 362 | T362I | aCa | aTa | 1 | 1 | AY.52 | 0.000814 |
N | 362 | T362K | aCa | aAa | 1 | 1 | AY.54 | 0.000095 |
N | 362 | T362P | Aca | Cca | 1 | 1 | AY.61 | 0.000105 |
N | 362 | T362T | acA | acT | 1 | 1 | AY.61 | 0.000105 |
N | 362 | T362I | aCa | aTa | 1 | 1 | AY.63 | 0.000387 |
N | 362 | T362I | aCa | aTa | 1 | 1 | AY.65 | 0.000533 |
N | 362 | T362del | ACA | --- | 1 | 1 | AY.67 | 0.000464 |
N | 362 | T362I | aCa | aTa | 1 | 1 | AY.7 | 0.000196 |
N | 362 | T362I | aCa | aTa | 1 | 1 | AY.72 | 0.001361 |
N | 362 | T362K | aCa | aAa | 1 | 1 | AY.75 | 0.000056 |
N | 362 | T362del | ACA | --- | 1 | 1 | AY.78 | 0.001541 |
N | 362 | T362I | aCa | aTa | 1 | 1 | AY.78 | 0.001541 |
N | 362 | T362I | aCa | aTa | 1 | 1 | AY.87 | 0.000833 |
N | 362 | T362I | aCa | aTa | 1 | 1 | AY.88 | 0.000884 |
N | 362 | T362T | acA | acG | 1 | 1 | AY.88 | 0.000884 |
N | 362 | T362K | aCa | aAa | 1 | 1 | AY.9.1 | 0.000084 |
N | 362 | T362T | acA | acG | 1 | 1 | AY.9.2 | 0.000037 |
N | 362 | T362I | aCa | aTa | 1 | 1 | AY.90 | 0.000684 |
N | 362 | T362K | aCa | aAa | 1 | 1 | AY.93 | 0.000273 |
N | 362 | T362K | aCa | aAa | 1 | 1 | AY.98.1 | 0.000048 |
N | 362 | T362I | aCa | aTa | 1 | 1 | AY.99 | 0.001049 |
N | 362 | T362I | aCa | aTa | 1 | 1 | AY.99.1 | 0.001553 |
N | 362 | T362K | aCa | aAa | 1 | 1 | AY.99.2 | 0.000092 |
N | 362 | T362T | acA | acC | 1 | 1 | AY.99.2 | 0.000092 |
N | 362 | T362I | aCa | aTa | 1 | 1 | AZ.2 | 0.000821 |
N | 362 | T362K | aCa | aAa | 1 | 1 | B | 0.000128 |
N | 362 | T362H | ACA | CAT | 1 | 1 | B.1.1 | 0.000018 |
N | 362 | T362Q | ACa | CAa | 1 | 1 | B.1.1 | 0.000018 |
N | 362 | T362N | aCA | aAT | 1 | 1 | B.1.1.1 | 0.000327 |
N | 362 | T362K | aCa | aAa | 1 | 1 | B.1.1.1 | 0.000327 |
N | 362 | T362T | acA | acT | 1 | 1 | B.1.1.1 | 0.000327 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.1.115 | 0.008929 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.1.132 | 0.014925 |
N | 362 | T362del | ACA | --- | 1 | 1 | B.1.1.139 | 0.022727 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.1.152 | 0.04 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.1.176 | 0.000439 |
N | 362 | T362K | aCa | aAa | 1 | 1 | B.1.1.189 | 0.001513 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.1.192 | 0.002309 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.1.200 | 0.007463 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.1.217 | 0.003636 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.1.220 | 0.001859 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.1.225 | 0.007194 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.1.25 | 0.000569 |
N | 362 | T362A | Aca | Gca | 1 | 1 | B.1.1.25 | 0.000569 |
N | 362 | T362L | ACa | TTa | 1 | 1 | B.1.1.27 | 0.00565 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.1.273 | 0.006757 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.1.277 | 0.000759 |
N | 362 | T362K | aCa | aAa | 1 | 1 | B.1.1.28 | 0.000311 |
N | 362 | T362A | Aca | Gca | 1 | 1 | B.1.1.284 | 0.000107 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.1.306 | 0.000438 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.1.308 | 0.011765 |
N | 362 | T362K | aCa | aAa | 1 | 1 | B.1.1.317 | 0.000412 |
N | 362 | T362T | acA | acG | 1 | 1 | B.1.1.317 | 0.000412 |
N | 362 | T362K | aCa | aAa | 1 | 1 | B.1.1.318 | 0.000302 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.1.318 | 0.000302 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.1.337 | 0.003597 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.1.348 | 0.000796 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.1.351 | 0.002793 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.1.366 | 0.015873 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.1.369 | 0.000446 |
N | 362 | T362del | ACA | --- | 1 | 1 | B.1.1.37 | 0.000193 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.1.37 | 0.000193 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.1.372 | 0.000689 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.1.374 | 0.002375 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.1.376 | 0.005952 |
N | 362 | T362A | Aca | Gca | 1 | 1 | B.1.1.377 | 0.001381 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.1.380 | 0.009804 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.1.381 | 0.04 |
N | 362 | T362K | aCa | aAa | 1 | 1 | B.1.1.397 | 0.002252 |
N | 362 | T362K | aCa | aAa | 1 | 1 | B.1.1.48 | 0.002874 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.1.5 | 0.008333 |
N | 362 | T362T | acA | acT | 1 | 1 | B.1.1.519 | 0.00004 |
N | 362 | T362del2 | ACA | M-- | 1 | 1 | B.1.1.7 | 0.000001 |
N | 362 | T362A | Aca | Gca | 1 | 1 | B.1.1.99 | 0.02381 |
N | 362 | T362K | aCa | aAa | 1 | 1 | B.1.111 | 0.001175 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.14 | 0.017544 |
N | 362 | T362K | aCa | aAa | 1 | 1 | B.1.146 | 0.004237 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.147 | 0.000756 |
N | 362 | T362K | aCa | aAa | 1 | 1 | B.1.160 | 0.000031 |
N | 362 | T362C | ACA | TGC | 1 | 1 | B.1.160 | 0.000031 |
N | 362 | T362D | ACA | GAC | 1 | 1 | B.1.160 | 0.000031 |
N | 362 | T362E | ACa | GAa | 1 | 1 | B.1.160 | 0.000031 |
N | 362 | T362R | aCa | aGa | 1 | 1 | B.1.160 | 0.000031 |
N | 362 | T362Y | ACA | TAC | 1 | 1 | B.1.160 | 0.000031 |
N | 362 | T362N | aCA | aAC | 1 | 1 | B.1.160 | 0.000031 |
N | 362 | T362T | acA | acC | 1 | 1 | B.1.160 | 0.000031 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.160.14 | 0.002119 |
N | 362 | T362T | acA | acG | 1 | 1 | B.1.160.26 | 0.002421 |
N | 362 | T362del | ACA | --- | 1 | 1 | B.1.162 | 0.005025 |
N | 362 | T362F | ACA | TTT | 1 | 1 | B.1.177 | 0.000013 |
N | 362 | T362R | aCa | aGa | 1 | 1 | B.1.177 | 0.000013 |
N | 362 | T362H | ACA | CAT | 1 | 1 | B.1.177 | 0.000013 |
N | 362 | T362M | aCA | aTG | 1 | 1 | B.1.177 | 0.000013 |
N | 362 | T362K | aCa | aAa | 1 | 1 | B.1.177.12 | 0.000152 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.177.15 | 0.000631 |
N | 362 | T362K | aCa | aAa | 1 | 1 | B.1.177.17 | 0.000821 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.177.21 | 0.000076 |
N | 362 | T362K | aCa | aAa | 1 | 1 | B.1.177.35 | 0.000691 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.177.45 | 0.000381 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.177.6 | 0.000977 |
N | 362 | T362R | aCa | aGa | 1 | 1 | B.1.177.60 | 0.000218 |
N | 362 | T362A | Aca | Gca | 1 | 1 | B.1.177.60 | 0.000218 |
N | 362 | T362S | aCA | aGT | 1 | 1 | B.1.177.63 | 0.002703 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.177.81 | 0.000189 |
N | 362 | T362K | aCa | aAa | 1 | 1 | B.1.177.86 | 0.000183 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.195 | 0.005025 |
N | 362 | T362Q | ACa | CAa | 1 | 1 | B.1.2 | 0.000009 |
N | 362 | T362K | aCa | aAa | 1 | 1 | B.1.206 | 0.000816 |
N | 362 | T362Q | ACa | CAa | 1 | 1 | B.1.221 | 0.000071 |
N | 362 | T362del | ACA | --- | 1 | 1 | B.1.221 | 0.000071 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.232 | 0.000537 |
N | 362 | T362P | Aca | Cca | 1 | 1 | B.1.234 | 0.000132 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.235 | 0.002519 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.239 | 0.001221 |
N | 362 | T362Q | ACa | CAa | 1 | 1 | B.1.258 | 0.000067 |
N | 362 | T362N | aCA | aAT | 1 | 1 | B.1.258 | 0.000067 |
N | 362 | T362P | Aca | Cca | 1 | 1 | B.1.258 | 0.000067 |
N | 362 | T362R | aCa | aGa | 1 | 1 | B.1.258.11 | 0.000396 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.258.14 | 0.00098 |
N | 362 | T362R | aCa | aGa | 1 | 1 | B.1.258.17 | 0.000104 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.260 | 0.003344 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.284 | 0.013158 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.289 | 0.00266 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.319 | 0.003049 |
N | 362 | T362T | acA | acG | 1 | 1 | B.1.336 | 0.002439 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.351.1 | 0.038462 |
N | 362 | T362K | aCa | aAa | 1 | 1 | B.1.351.3 | 0.000876 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.356 | 0.001727 |
N | 362 | T362T | acA | acC | 1 | 1 | B.1.36 | 0.000146 |
N | 362 | T362A | Aca | Gca | 1 | 1 | B.1.36 | 0.000146 |
N | 362 | T362K | aCa | aAa | 1 | 1 | B.1.36.29 | 0.000517 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.36.34 | 0.021277 |
N | 362 | T362del1 | aCa | a-a | 1 | 1 | B.1.36.8 | 0.001 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.36.9 | 0.003215 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.361 | 0.001289 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.367 | 0.000792 |
N | 362 | T362K | aCa | aAa | 1 | 1 | B.1.398 | 0.002976 |
N | 362 | T362T | acA | acT | 1 | 1 | B.1.399 | 0.001934 |
N | 362 | T362K | aCa | aAa | 1 | 1 | B.1.409 | 0.000781 |
N | 362 | T362del | ACA | --- | 1 | 1 | B.1.415 | 0.014286 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.415 | 0.014286 |
N | 362 | T362A | Aca | Gca | 1 | 1 | B.1.429 | 0.000024 |
N | 362 | T362T | acA | acG | 1 | 1 | B.1.429 | 0.000024 |
N | 362 | T362del | ACA | --- | 1 | 1 | B.1.429 | 0.000024 |
N | 362 | T362H | ACA | CAC | 1 | 1 | B.1.437 | 0.020833 |
N | 362 | T362Q | ACa | CAa | 1 | 1 | B.1.437 | 0.020833 |
N | 362 | T362X | ACa | TAa | 1 | 1 | B.1.437 | 0.020833 |
N | 362 | T362T | acA | acC | 1 | 1 | B.1.437 | 0.020833 |
N | 362 | T362N | aCA | aAC | 1 | 1 | B.1.437 | 0.020833 |
N | 362 | T362K | aCa | aAa | 1 | 1 | B.1.437 | 0.020833 |
N | 362 | T362Y | ACA | TAC | 1 | 1 | B.1.437 | 0.020833 |
N | 362 | T362F | ACA | TTC | 1 | 1 | B.1.437 | 0.020833 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.462 | 0.007246 |
N | 362 | T362T | acA | acG | 1 | 1 | B.1.470 | 0.001404 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.471 | 0.002732 |
N | 362 | T362del | ACA | --- | 1 | 1 | B.1.526 | 0.000024 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.527 | 0.003704 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.535 | 0.028571 |
N | 362 | T362K | aCa | aAa | 1 | 1 | B.1.565 | 0.00081 |
N | 362 | T362T | acA | acC | 1 | 1 | B.1.565 | 0.00081 |
N | 362 | T362K | aCa | aAa | 1 | 1 | B.1.575 | 0.000303 |
N | 362 | T362T | acA | acT | 1 | 1 | B.1.588 | 0.00091 |
N | 362 | T362K | aCa | aAa | 1 | 1 | B.1.596 | 0.000087 |
N | 362 | T362K | aCa | aAa | 1 | 1 | B.1.596.1 | 0.009346 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.599 | 0.00365 |
N | 362 | T362T | acA | acC | 1 | 1 | B.1.609 | 0.000479 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.609 | 0.000479 |
N | 362 | T362K | aCa | aAa | 1 | 1 | B.1.609 | 0.000479 |
N | 362 | T362N | aCA | aAC | 1 | 1 | B.1.609 | 0.000479 |
N | 362 | T362A | Aca | Gca | 1 | 1 | B.1.617.1 | 0.000129 |
N | 362 | T362S | Aca | Tca | 1 | 1 | B.1.617.2 | 0.000004 |
N | 362 | T362K | aCa | aAa | 1 | 1 | B.1.621.1 | 0.000506 |
N | 362 | T362T | acA | acG | 1 | 1 | B.1.627 | 0.00202 |
N | 362 | T362del | ACA | --- | 1 | 1 | B.1.630 | 0.005236 |
N | 362 | T362P | Aca | Cca | 1 | 1 | B.1.637 | 0.000073 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.78 | 0.008547 |
N | 362 | T362K | aCa | aAa | 1 | 1 | B.1.78 | 0.008547 |
N | 362 | T362E | ACa | GAa | 1 | 1 | B.1.9 | 0.006173 |
N | 362 | T362K | aCa | aAa | 1 | 1 | B.1.9 | 0.006173 |
N | 362 | T362A | Aca | Gca | 1 | 1 | B.1.9 | 0.006173 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.1.9 | 0.006173 |
N | 362 | T362V | ACa | GTa | 1 | 1 | B.1.9 | 0.006173 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.4 | 0.002208 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.6.6 | 0.000889 |
N | 362 | T362I | aCa | aTa | 1 | 1 | B.60 | 0.015873 |
N | 362 | T362K | aCa | aAa | 1 | 1 | C.26 | 0.007353 |
N | 362 | T362A | Aca | Gca | 1 | 1 | C.36.3 | 0.000567 |
N | 362 | T362T | acA | acT | 1 | 1 | C.37 | 0.000116 |
N | 362 | T362K | aCa | aAa | 1 | 1 | D.2 | 0.000075 |
N | 362 | T362T | acA | acG | 1 | 1 | N.2 | 0.038462 |
N | 362 | T362M | aCA | aTG | 1 | 1 | P.1 | 0.000016 |
N | 362 | T362T | acA | acG | 1 | 1 | P.1.15 | 0.000232 |
N | 362 | T362I | aCa | aTa | 1 | 1 | P.1.16 | 0.000374 |
N | 362 | T362I | aCa | aTa | 1 | 1 | P.1.17 | 0.000162 |
N | 362 | T362I | aCa | aTa | 1 | 1 | P.1.2 | 0.001156 |
N | 362 | T362K | aCa | aAa | 1 | 1 | P.1.2 | 0.001156 |
N | 362 | T362I | aCa | aTa | 1 | 1 | P.3 | 0.001595 |
N | 362 | T362K | aCa | aAa | 1 | 1 | Q.1 | 0.000126 |
N | 362 | T362R | aCa | aGa | 1 | 1 | Q.1 | 0.000126 |
N | 362 | T362I | aCa | aTa | 1 | 1 | Y.1 | 0.012821 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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