CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
N | 35 | A35A | syn | gcG | gcT | 30162 | 21634 | 0.71726 | 28376-28378 | |
N | 35 | A35A | syn | gcG | gcA | 30162 | 4672 | 0.154897 | 28376-28378 | |
N | 35 | A35A | syn | gcG | gcC | 30162 | 3856 | 0.127843 | 28376-28378 | |
N | 35 | A35V | nonsyn | gCg | gTg | 2835 | 2824 | 0.99612 | 28376-28378 | |
N | 35 | A35V | nonsyn | gCG | gTT | 2835 | 10 | 0.00352734 | 28376-28378 | |
N | 35 | A35V | nonsyn | gCG | gTA | 2835 | 1 | 0.000352734 | 28376-28378 | |
N | 35 | A35S | nonsyn | Gcg | Tcg | 1816 | 1662 | 0.915198 | 28376-28378 | |
N | 35 | A35S | nonsyn | GcG | TcT | 1816 | 144 | 0.0792952 | 28376-28378 | |
N | 35 | A35S | nonsyn | GcG | TcA | 1816 | 6 | 0.00330396 | 28376-28378 | |
N | 35 | A35S | nonsyn | GcG | TcC | 1816 | 4 | 0.00220264 | 28376-28378 | |
N | 35 | A35T | nonsyn | Gcg | Acg | 1814 | 1811 | 0.998346 | 28376-28378 | |
N | 35 | A35T | nonsyn | GcG | AcA | 1814 | 2 | 0.00110254 | 28376-28378 | |
N | 35 | A35T | nonsyn | GcG | AcT | 1814 | 1 | 0.000551268 | 28376-28378 | |
N | 35 | A35E | nonsyn | gCg | gAg | 54 | 42 | 0.777778 | 28376-28378 | |
N | 35 | A35E | nonsyn | gCG | gAA | 54 | 12 | 0.222222 | 28376-28378 | |
N | 35 | A35del | del | GCG | --- | 41 | 41 | 1 | 28376-28378 | |
N | 35 | A35L | nonsyn | GCg | TTg | 27 | 27 | 1 | 28376-28378 | |
N | 35 | A35P | nonsyn | Gcg | Ccg | 10 | 10 | 1 | 28376-28378 | |
N | 35 | A35G | nonsyn | gCg | gGg | 10 | 8 | 0.8 | 28376-28378 | |
N | 35 | A35G | nonsyn | gCG | gGT | 10 | 1 | 0.1 | 28376-28378 | |
N | 35 | A35G | nonsyn | gCG | gGC | 10 | 1 | 0.1 | 28376-28378 | |
N | 35 | A35del1 | del | gCg | g-g | 4 | 3 | 0.75 | 28376-28378 | |
N | 35 | A35del1 | del | gcG | gc- | 4 | 1 | 0.25 | 28376-28378 | |
N | 35 | A35del2 | del | GCg | --g | 3 | 2 | 0.666667 | 28376-28378 | |
N | 35 | A35del2 | del | GCG | --C | 3 | 1 | 0.333333 | 28376-28378 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
N | 35 | A35A | gcG | gcT | 21634 | 30162 | All | 0.004138 |
N | 35 | A35A | gcG | gcA | 4672 | 30162 | All | 0.000894 |
N | 35 | A35A | gcG | gcC | 3856 | 30162 | All | 0.000738 |
N | 35 | A35A | gcG | gcT | 4090 | 4205 | B.1.617.2 | 0.015401 |
N | 35 | A35A | gcG | gcA | 64 | 4205 | B.1.617.2 | 0.000241 |
N | 35 | A35A | gcG | gcC | 51 | 4205 | B.1.617.2 | 0.000192 |
N | 35 | A35A | gcG | gcA | 2110 | 4190 | AY.4 | 0.003284 |
N | 35 | A35A | gcG | gcC | 1162 | 4190 | AY.4 | 0.001809 |
N | 35 | A35A | gcG | gcT | 918 | 4190 | AY.4 | 0.001429 |
N | 35 | A35A | gcG | gcT | 2498 | 3084 | B.1.1.7 | 0.002236 |
N | 35 | A35A | gcG | gcA | 479 | 3084 | B.1.1.7 | 0.000429 |
N | 35 | A35A | gcG | gcC | 107 | 3084 | B.1.1.7 | 0.000096 |
N | 35 | A35V | gCg | gTg | 2824 | 2835 | All | 0.00054 |
N | 35 | A35V | gCG | gTT | 10 | 2835 | All | 0.000002 |
N | 35 | A35V | gCG | gTA | 1 | 2835 | All | 0 |
N | 35 | A35A | gcG | gcT | 2095 | 2095 | B.1.177.82 | 1 |
N | 35 | A35S | Gcg | Tcg | 1662 | 1816 | All | 0.000318 |
N | 35 | A35S | GcG | TcT | 144 | 1816 | All | 0.000028 |
N | 35 | A35S | GcG | TcA | 6 | 1816 | All | 0.000001 |
N | 35 | A35S | GcG | TcC | 4 | 1816 | All | 0.000001 |
N | 35 | A35T | Gcg | Acg | 1811 | 1814 | All | 0.000346 |
N | 35 | A35T | GcG | AcA | 2 | 1814 | All | 0 |
N | 35 | A35T | GcG | AcT | 1 | 1814 | All | 0 |
N | 35 | A35A | gcG | gcC | 1411 | 1411 | A.23.1 | 0.993662 |
N | 35 | A35A | gcG | gcT | 1375 | 1376 | B.1.621 | 0.121714 |
N | 35 | A35A | gcG | gcA | 1 | 1376 | B.1.621 | 0.000089 |
N | 35 | A35A | gcG | gcT | 1066 | 1066 | AY.46.3 | 0.995331 |
N | 35 | A35A | gcG | gcT | 1026 | 1063 | AY.43 | 0.004546 |
N | 35 | A35A | gcG | gcA | 34 | 1063 | AY.43 | 0.000151 |
N | 35 | A35A | gcG | gcC | 3 | 1063 | AY.43 | 0.000013 |
N | 35 | A35A | gcG | gcT | 1014 | 1028 | AY.102 | 0.026885 |
N | 35 | A35A | gcG | gcC | 10 | 1028 | AY.102 | 0.000265 |
N | 35 | A35A | gcG | gcA | 4 | 1028 | AY.102 | 0.000106 |
N | 35 | A35T | Gcg | Acg | 618 | 618 | AY.4 | 0.000962 |
N | 35 | A35S | Gcg | Tcg | 604 | 605 | AY.62 | 0.263181 |
N | 35 | A35S | GcG | TcA | 1 | 605 | AY.62 | 0.000436 |
N | 35 | A35A | gcG | gcA | 505 | 509 | AY.68 | 0.138243 |
N | 35 | A35A | gcG | gcT | 4 | 509 | AY.68 | 0.001095 |
N | 35 | A35A | gcG | gcT | 482 | 499 | B.1.177 | 0.006347 |
N | 35 | A35A | gcG | gcA | 11 | 499 | B.1.177 | 0.000145 |
N | 35 | A35A | gcG | gcC | 6 | 499 | B.1.177 | 0.000079 |
N | 35 | A35A | gcG | gcT | 260 | 427 | B.1.2 | 0.002289 |
N | 35 | A35A | gcG | gcC | 113 | 427 | B.1.2 | 0.000995 |
N | 35 | A35A | gcG | gcA | 54 | 427 | B.1.2 | 0.000475 |
N | 35 | A35A | gcG | gcT | 354 | 400 | AY.39 | 0.008748 |
N | 35 | A35A | gcG | gcC | 25 | 400 | AY.39 | 0.000618 |
N | 35 | A35A | gcG | gcA | 21 | 400 | AY.39 | 0.000519 |
N | 35 | A35A | gcG | gcT | 163 | 390 | P.1 | 0.002568 |
N | 35 | A35A | gcG | gcC | 142 | 390 | P.1 | 0.002237 |
N | 35 | A35A | gcG | gcA | 85 | 390 | P.1 | 0.001339 |
N | 35 | A35V | gCg | gTg | 374 | 374 | A.28 | 0.989418 |
N | 35 | A35A | gcG | gcT | 317 | 348 | AY.98.1 | 0.015353 |
N | 35 | A35A | gcG | gcA | 28 | 348 | AY.98.1 | 0.001356 |
N | 35 | A35A | gcG | gcC | 3 | 348 | AY.98.1 | 0.000145 |
N | 35 | A35S | Gcg | Tcg | 282 | 336 | B.1.2 | 0.002483 |
N | 35 | A35S | GcG | TcT | 54 | 336 | B.1.2 | 0.000475 |
N | 35 | A35A | gcG | gcT | 243 | 327 | B.1 | 0.002226 |
N | 35 | A35A | gcG | gcC | 56 | 327 | B.1 | 0.000513 |
N | 35 | A35A | gcG | gcA | 28 | 327 | B.1 | 0.000256 |
N | 35 | A35V | gCg | gTg | 326 | 326 | AY.4 | 0.000507 |
N | 35 | A35A | gcG | gcA | 299 | 326 | AY.9.2 | 0.010982 |
N | 35 | A35A | gcG | gcT | 27 | 326 | AY.9.2 | 0.000992 |
N | 35 | A35A | gcG | gcT | 267 | 302 | AY.103 | 0.001658 |
N | 35 | A35A | gcG | gcA | 24 | 302 | AY.103 | 0.000149 |
N | 35 | A35A | gcG | gcC | 11 | 302 | AY.103 | 0.000068 |
N | 35 | A35A | gcG | gcT | 243 | 293 | AY.44 | 0.001479 |
N | 35 | A35A | gcG | gcA | 33 | 293 | AY.44 | 0.000201 |
N | 35 | A35A | gcG | gcC | 17 | 293 | AY.44 | 0.000103 |
N | 35 | A35A | gcG | gcT | 263 | 263 | B.1.1.174 | 0.888514 |
N | 35 | A35A | gcG | gcT | 249 | 256 | AY.14 | 0.021915 |
N | 35 | A35A | gcG | gcA | 7 | 256 | AY.14 | 0.000616 |
N | 35 | A35A | gcG | gcT | 116 | 245 | AY.25 | 0.000698 |
N | 35 | A35A | gcG | gcA | 105 | 245 | AY.25 | 0.000632 |
N | 35 | A35A | gcG | gcC | 24 | 245 | AY.25 | 0.000144 |
N | 35 | A35A | gcG | gcT | 228 | 228 | B.1.189 | 0.978541 |
N | 35 | A35V | gCg | gTg | 191 | 192 | B.1.1.7 | 0.000171 |
N | 35 | A35V | gCG | gTA | 1 | 192 | B.1.1.7 | 0.000001 |
N | 35 | A35V | gCg | gTg | 189 | 189 | AY.44 | 0.00115 |
N | 35 | A35S | Gcg | Tcg | 184 | 184 | B.1.617.2 | 0.000693 |
N | 35 | A35T | Gcg | Acg | 165 | 165 | B.1.351 | 0.004905 |
N | 35 | A35A | gcG | gcT | 137 | 162 | AY.61 | 0.014355 |
N | 35 | A35A | gcG | gcC | 24 | 162 | AY.61 | 0.002515 |
N | 35 | A35A | gcG | gcA | 1 | 162 | AY.61 | 0.000105 |
N | 35 | A35A | gcG | gcT | 147 | 150 | B.1.1.306 | 0.064445 |
N | 35 | A35A | gcG | gcC | 3 | 150 | B.1.1.306 | 0.001315 |
N | 35 | A35A | gcG | gcT | 75 | 148 | AY.3 | 0.000746 |
N | 35 | A35A | gcG | gcA | 70 | 148 | AY.3 | 0.000696 |
N | 35 | A35A | gcG | gcC | 3 | 148 | AY.3 | 0.00003 |
N | 35 | A35V | gCg | gTg | 147 | 147 | AY.3 | 0.001462 |
N | 35 | A35T | Gcg | Acg | 146 | 146 | AY.75 | 0.008179 |
N | 35 | A35T | Gcg | Acg | 144 | 145 | B.1.617.2 | 0.000542 |
N | 35 | A35T | GcG | AcT | 1 | 145 | B.1.617.2 | 0.000004 |
N | 35 | A35A | gcG | gcT | 81 | 137 | B.1.526 | 0.001904 |
N | 35 | A35A | gcG | gcA | 45 | 137 | B.1.526 | 0.001058 |
N | 35 | A35A | gcG | gcC | 11 | 137 | B.1.526 | 0.000259 |
N | 35 | A35A | gcG | gcC | 55 | 126 | B.1.1 | 0.000998 |
N | 35 | A35A | gcG | gcA | 37 | 126 | B.1.1 | 0.000671 |
N | 35 | A35A | gcG | gcT | 34 | 126 | B.1.1 | 0.000617 |
N | 35 | A35A | gcG | gcT | 108 | 124 | B.1.1.519 | 0.004289 |
N | 35 | A35A | gcG | gcA | 8 | 124 | B.1.1.519 | 0.000318 |
N | 35 | A35A | gcG | gcC | 8 | 124 | B.1.1.519 | 0.000318 |
N | 35 | A35A | gcG | gcC | 123 | 123 | B.1.1.301 | 0.145047 |
N | 35 | A35V | gCg | gTg | 120 | 120 | B.1.617.2 | 0.000452 |
N | 35 | A35A | gcG | gcT | 112 | 119 | AY.98 | 0.008847 |
N | 35 | A35A | gcG | gcC | 5 | 119 | AY.98 | 0.000395 |
N | 35 | A35A | gcG | gcA | 2 | 119 | AY.98 | 0.000158 |
N | 35 | A35A | gcG | gcC | 95 | 109 | B.1.177.7 | 0.015661 |
N | 35 | A35A | gcG | gcT | 14 | 109 | B.1.177.7 | 0.002308 |
N | 35 | A35A | gcG | gcT | 108 | 108 | B.1.1.528 | 0.519231 |
N | 35 | A35A | gcG | gcT | 101 | 108 | B.1.258.17 | 0.010501 |
N | 35 | A35A | gcG | gcC | 7 | 108 | B.1.258.17 | 0.000728 |
N | 35 | A35A | gcG | gcT | 103 | 107 | AY.29 | 0.001625 |
N | 35 | A35A | gcG | gcC | 3 | 107 | AY.29 | 0.000047 |
N | 35 | A35A | gcG | gcA | 1 | 107 | AY.29 | 0.000016 |
N | 35 | A35T | Gcg | Acg | 106 | 106 | AY.46.4 | 0.017437 |
N | 35 | A35V | gCg | gTg | 104 | 104 | AY.42 | 0.004184 |
N | 35 | A35A | gcG | gcT | 63 | 95 | B.1.1.222 | 0.012852 |
N | 35 | A35A | gcG | gcA | 25 | 95 | B.1.1.222 | 0.0051 |
N | 35 | A35A | gcG | gcC | 7 | 95 | B.1.1.222 | 0.001428 |
N | 35 | A35A | gcG | gcC | 93 | 93 | A.23 | 0.978947 |
N | 35 | A35S | Gcg | Tcg | 86 | 87 | B.1.1.7 | 0.000077 |
N | 35 | A35S | GcG | TcT | 1 | 87 | B.1.1.7 | 0.000001 |
N | 35 | A35A | gcG | gcT | 75 | 85 | AY.117 | 0.006339 |
N | 35 | A35A | gcG | gcC | 9 | 85 | AY.117 | 0.000761 |
N | 35 | A35A | gcG | gcA | 1 | 85 | AY.117 | 0.000085 |
N | 35 | A35A | gcG | gcT | 64 | 83 | B.1.36 | 0.009338 |
N | 35 | A35A | gcG | gcC | 17 | 83 | B.1.36 | 0.00248 |
N | 35 | A35A | gcG | gcA | 2 | 83 | B.1.36 | 0.000292 |
N | 35 | A35A | gcG | gcT | 66 | 82 | B.1.429 | 0.001553 |
N | 35 | A35A | gcG | gcA | 16 | 82 | B.1.429 | 0.000376 |
N | 35 | A35A | gcG | gcT | 67 | 81 | AY.6 | 0.002756 |
N | 35 | A35A | gcG | gcA | 14 | 81 | AY.6 | 0.000576 |
N | 35 | A35A | gcG | gcT | 70 | 78 | B.1.240 | 0.015089 |
N | 35 | A35A | gcG | gcA | 8 | 78 | B.1.240 | 0.001725 |
N | 35 | A35A | gcG | gcT | 67 | 75 | AY.46 | 0.006973 |
N | 35 | A35A | gcG | gcC | 6 | 75 | AY.46 | 0.000624 |
N | 35 | A35A | gcG | gcA | 2 | 75 | AY.46 | 0.000208 |
N | 35 | A35T | Gcg | Acg | 75 | 75 | B.1.1.7 | 0.000067 |
N | 35 | A35T | Gcg | Acg | 74 | 74 | AY.3 | 0.000736 |
N | 35 | A35A | gcG | gcT | 66 | 72 | AY.5 | 0.001363 |
N | 35 | A35A | gcG | gcA | 5 | 72 | AY.5 | 0.000103 |
N | 35 | A35A | gcG | gcC | 1 | 72 | AY.5 | 0.000021 |
N | 35 | A35V | gCg | gTg | 71 | 72 | B.1 | 0.00065 |
N | 35 | A35V | gCG | gTT | 1 | 72 | B.1 | 0.000009 |
N | 35 | A35V | gCg | gTg | 71 | 71 | B.1.466.2 | 0.027778 |
N | 35 | A35S | GcG | TcT | 67 | 69 | AY.4.5 | 0.007202 |
N | 35 | A35S | Gcg | Tcg | 2 | 69 | AY.4.5 | 0.000215 |
N | 35 | A35S | Gcg | Tcg | 69 | 69 | AY.75 | 0.003866 |
N | 35 | A35V | gCg | gTg | 69 | 69 | B.1.177 | 0.000909 |
N | 35 | A35A | gcG | gcT | 47 | 66 | AY.26 | 0.001331 |
N | 35 | A35A | gcG | gcC | 15 | 66 | AY.26 | 0.000425 |
N | 35 | A35A | gcG | gcA | 4 | 66 | AY.26 | 0.000113 |
N | 35 | A35A | gcG | gcA | 32 | 66 | B.1.160 | 0.000998 |
N | 35 | A35A | gcG | gcT | 28 | 66 | B.1.160 | 0.000873 |
N | 35 | A35A | gcG | gcC | 6 | 66 | B.1.160 | 0.000187 |
N | 35 | A35A | gcG | gcT | 62 | 62 | AY.94 | 0.027446 |
N | 35 | A35A | gcG | gcT | 60 | 60 | B.1.1.277 | 0.045524 |
N | 35 | A35A | gcG | gcT | 58 | 58 | AY.34.1 | 0.029577 |
N | 35 | A35A | gcG | gcT | 55 | 58 | AY.36 | 0.008152 |
N | 35 | A35A | gcG | gcA | 2 | 58 | AY.36 | 0.000296 |
N | 35 | A35A | gcG | gcC | 1 | 58 | AY.36 | 0.000148 |
N | 35 | A35V | gCg | gTg | 57 | 57 | B.1.575 | 0.017294 |
N | 35 | A35T | Gcg | Acg | 56 | 56 | B.1.1 | 0.001016 |
N | 35 | A35A | gcG | gcT | 56 | 56 | B.1.258.7 | 0.107075 |
N | 35 | A35E | gCg | gAg | 42 | 54 | All | 0.000008 |
N | 35 | A35E | gCG | gAA | 12 | 54 | All | 0.000002 |
N | 35 | A35A | gcG | gcT | 27 | 54 | AY.20 | 0.001049 |
N | 35 | A35A | gcG | gcA | 22 | 54 | AY.20 | 0.000855 |
N | 35 | A35A | gcG | gcC | 5 | 54 | AY.20 | 0.000194 |
N | 35 | A35V | gCg | gTg | 54 | 54 | D.2 | 0.004052 |
N | 35 | A35A | gcG | gcT | 51 | 53 | AY.120 | 0.001896 |
N | 35 | A35A | gcG | gcC | 2 | 53 | AY.120 | 0.000074 |
N | 35 | A35S | Gcg | Tcg | 50 | 53 | AY.4 | 0.000078 |
N | 35 | A35S | GcG | TcC | 3 | 53 | AY.4 | 0.000005 |
N | 35 | A35A | gcG | gcT | 47 | 53 | AY.42 | 0.001891 |
N | 35 | A35A | gcG | gcA | 4 | 53 | AY.42 | 0.000161 |
N | 35 | A35A | gcG | gcC | 2 | 53 | AY.42 | 0.00008 |
N | 35 | A35V | gCg | gTg | 53 | 53 | AY.47 | 0.001649 |
N | 35 | A35V | gCg | gTg | 52 | 52 | B.1.2 | 0.000458 |
N | 35 | A35A | gcG | gcT | 47 | 52 | B.1.258 | 0.003128 |
N | 35 | A35A | gcG | gcC | 3 | 52 | B.1.258 | 0.0002 |
N | 35 | A35A | gcG | gcA | 2 | 52 | B.1.258 | 0.000133 |
N | 35 | A35A | gcG | gcT | 38 | 51 | AY.100 | 0.001748 |
N | 35 | A35A | gcG | gcA | 10 | 51 | AY.100 | 0.00046 |
N | 35 | A35A | gcG | gcC | 3 | 51 | AY.100 | 0.000138 |
N | 35 | A35A | gcG | gcT | 27 | 51 | AY.119 | 0.000953 |
N | 35 | A35A | gcG | gcA | 15 | 51 | AY.119 | 0.00053 |
N | 35 | A35A | gcG | gcC | 9 | 51 | AY.119 | 0.000318 |
N | 35 | A35A | gcG | gcT | 50 | 51 | B.1.177.77 | 0.036311 |
N | 35 | A35A | gcG | gcA | 1 | 51 | B.1.177.77 | 0.000726 |
N | 35 | A35A | gcG | gcT | 48 | 51 | P.2 | 0.008959 |
N | 35 | A35A | gcG | gcA | 3 | 51 | P.2 | 0.00056 |
N | 35 | A35S | Gcg | Tcg | 48 | 48 | B.1 | 0.00044 |
N | 35 | A35V | gCg | gTg | 47 | 47 | B.1.1 | 0.000853 |
N | 35 | A35S | Gcg | Tcg | 46 | 46 | AY.100 | 0.002116 |
N | 35 | A35T | Gcg | Acg | 46 | 46 | B.1.177 | 0.000606 |
N | 35 | A35A | gcG | gcT | 41 | 46 | B.1.351 | 0.001219 |
N | 35 | A35A | gcG | gcA | 5 | 46 | B.1.351 | 0.000149 |
N | 35 | A35A | gcG | gcA | 29 | 45 | AY.77 | 0.032694 |
N | 35 | A35A | gcG | gcT | 16 | 45 | AY.77 | 0.018038 |
N | 35 | A35V | gCg | gTg | 45 | 45 | P.1 | 0.000709 |
N | 35 | A35A | gcG | gcT | 41 | 44 | AY.69 | 0.007654 |
N | 35 | A35A | gcG | gcC | 3 | 44 | AY.69 | 0.00056 |
N | 35 | A35S | Gcg | Tcg | 44 | 44 | B.1.359 | 1 |
N | 35 | A35A | gcG | gcT | 44 | 44 | B.1.404 | 0.057292 |
N | 35 | A35A | gcG | gcT | 42 | 42 | B.1.1.518 | 0.265823 |
N | 35 | A35V | gCg | gTg | 42 | 42 | B.1.243 | 0.002923 |
N | 35 | A35V | gCg | gTg | 42 | 42 | B.1.258 | 0.002795 |
N | 35 | A35del | GCG | --- | 41 | 41 | All | 0.000008 |
N | 35 | A35A | gcG | gcT | 24 | 41 | AY.39.1 | 0.000951 |
N | 35 | A35A | gcG | gcA | 17 | 41 | AY.39.1 | 0.000673 |
N | 35 | A35T | Gcg | Acg | 40 | 40 | AY.25 | 0.000241 |
N | 35 | A35A | gcG | gcT | 39 | 40 | B.1.1.159 | 0.182243 |
N | 35 | A35A | gcG | gcA | 1 | 40 | B.1.1.159 | 0.004673 |
N | 35 | A35A | gcG | gcT | 35 | 39 | AY.113 | 0.004984 |
N | 35 | A35A | gcG | gcC | 2 | 39 | AY.113 | 0.000285 |
N | 35 | A35A | gcG | gcA | 2 | 39 | AY.113 | 0.000285 |
N | 35 | A35V | gCg | gTg | 38 | 39 | AY.25 | 0.000229 |
N | 35 | A35V | gCG | gTT | 1 | 39 | AY.25 | 0.000006 |
N | 35 | A35A | gcG | gcT | 37 | 39 | AY.45 | 0.004502 |
N | 35 | A35A | gcG | gcC | 2 | 39 | AY.45 | 0.000243 |
N | 35 | A35A | gcG | gcA | 26 | 38 | AY.46.6 | 0.001877 |
N | 35 | A35A | gcG | gcT | 12 | 38 | AY.46.6 | 0.000866 |
N | 35 | A35A | gcG | gcT | 37 | 38 | AY.75.1 | 0.006671 |
N | 35 | A35A | gcG | gcA | 1 | 38 | AY.75.1 | 0.00018 |
N | 35 | A35A | gcG | gcT | 32 | 38 | AY.92 | 0.009193 |
N | 35 | A35A | gcG | gcA | 3 | 38 | AY.92 | 0.000862 |
N | 35 | A35A | gcG | gcC | 3 | 38 | AY.92 | 0.000862 |
N | 35 | A35A | gcG | gcT | 32 | 37 | AY.33 | 0.002137 |
N | 35 | A35A | gcG | gcC | 5 | 37 | AY.33 | 0.000334 |
N | 35 | A35A | gcG | gcT | 35 | 35 | B.1.241 | 0.028409 |
N | 35 | A35A | gcG | gcT | 33 | 35 | B.1.609 | 0.01582 |
N | 35 | A35A | gcG | gcC | 2 | 35 | B.1.609 | 0.000959 |
N | 35 | A35A | gcG | gcT | 30 | 34 | AY.4.2 | 0.000651 |
N | 35 | A35A | gcG | gcA | 3 | 34 | AY.4.2 | 0.000065 |
N | 35 | A35A | gcG | gcC | 1 | 34 | AY.4.2 | 0.000022 |
N | 35 | A35V | gCg | gTg | 34 | 34 | B.1.637 | 0.002484 |
N | 35 | A35V | gCg | gTg | 33 | 33 | B.1.1.33 | 0.013889 |
N | 35 | A35A | gcG | gcT | 33 | 33 | B.1.628 | 0.011628 |
N | 35 | A35V | gCg | gTg | 32 | 32 | AY.103 | 0.000199 |
N | 35 | A35A | gcG | gcT | 32 | 32 | AY.116 | 0.009177 |
N | 35 | A35A | gcG | gcT | 32 | 32 | B.1.239 | 0.039072 |
N | 35 | A35A | gcG | gcT | 31 | 31 | AD.2 | 0.006788 |
N | 35 | A35A | gcG | gcT | 15 | 31 | P.1.14 | 0.000717 |
N | 35 | A35A | gcG | gcA | 13 | 31 | P.1.14 | 0.000621 |
N | 35 | A35A | gcG | gcC | 3 | 31 | P.1.14 | 0.000143 |
N | 35 | A35A | gcG | gcA | 29 | 30 | B.1.177.81 | 0.00549 |
N | 35 | A35A | gcG | gcT | 1 | 30 | B.1.177.81 | 0.000189 |
N | 35 | A35V | gCg | gTg | 29 | 29 | AY.11 | 0.038822 |
N | 35 | A35A | gcG | gcT | 25 | 29 | AY.23 | 0.001744 |
N | 35 | A35A | gcG | gcA | 3 | 29 | AY.23 | 0.000209 |
N | 35 | A35A | gcG | gcC | 1 | 29 | AY.23 | 0.00007 |
N | 35 | A35A | gcG | gcT | 28 | 28 | B.1.1.214 | 0.001553 |
N | 35 | A35V | gCg | gTg | 28 | 28 | Q.6 | 0.18543 |
N | 35 | A35L | GCg | TTg | 27 | 27 | All | 0.000005 |
N | 35 | A35A | gcG | gcT | 14 | 27 | AY.47 | 0.000435 |
N | 35 | A35A | gcG | gcC | 10 | 27 | AY.47 | 0.000311 |
N | 35 | A35A | gcG | gcA | 3 | 27 | AY.47 | 0.000093 |
N | 35 | A35A | gcG | gcT | 24 | 27 | AY.9 | 0.001622 |
N | 35 | A35A | gcG | gcA | 2 | 27 | AY.9 | 0.000135 |
N | 35 | A35A | gcG | gcC | 1 | 27 | AY.9 | 0.000068 |
N | 35 | A35A | gcG | gcT | 27 | 27 | B.1.1.274 | 0.136364 |
N | 35 | A35A | gcG | gcT | 26 | 27 | B.1.396 | 0.018349 |
N | 35 | A35A | gcG | gcA | 1 | 27 | B.1.396 | 0.000706 |
N | 35 | A35T | Gcg | Acg | 27 | 27 | B.1.526 | 0.000635 |
N | 35 | A35A | gcG | gcT | 20 | 26 | AY.9.1 | 0.001674 |
N | 35 | A35A | gcG | gcA | 6 | 26 | AY.9.1 | 0.000502 |
N | 35 | A35V | gCg | gTg | 26 | 26 | B.1.1.519 | 0.001032 |
N | 35 | A35A | gcG | gcT | 25 | 26 | B.1.637 | 0.001827 |
N | 35 | A35A | gcG | gcA | 1 | 26 | B.1.637 | 0.000073 |
N | 35 | A35V | gCg | gTg | 23 | 25 | B.1.466 | 0.534884 |
N | 35 | A35V | gCG | gTT | 2 | 25 | B.1.466 | 0.046512 |
N | 35 | A35L | GCg | TTg | 24 | 24 | AY.4 | 0.000037 |
N | 35 | A35S | Gcg | Tcg | 24 | 24 | AY.43 | 0.000106 |
N | 35 | A35A | gcG | gcA | 13 | 23 | B | 0.001662 |
N | 35 | A35A | gcG | gcT | 9 | 23 | B | 0.00115 |
N | 35 | A35A | gcG | gcC | 1 | 23 | B | 0.000128 |
N | 35 | A35A | gcG | gcA | 23 | 23 | C.36 | 0.020947 |
N | 35 | A35A | gcG | gcC | 11 | 22 | A | 0.004257 |
N | 35 | A35A | gcG | gcA | 9 | 22 | A | 0.003483 |
N | 35 | A35A | gcG | gcT | 2 | 22 | A | 0.000774 |
N | 35 | A35T | Gcg | Acg | 22 | 22 | AY.26 | 0.000623 |
N | 35 | A35A | gcG | gcT | 22 | 22 | B.1.177.53 | 0.052632 |
N | 35 | A35A | gcG | gcT | 11 | 22 | B.1.617.1 | 0.001419 |
N | 35 | A35A | gcG | gcA | 11 | 22 | B.1.617.1 | 0.001419 |
N | 35 | A35A | gcG | gcT | 12 | 22 | R.1 | 0.00108 |
N | 35 | A35A | gcG | gcA | 8 | 22 | R.1 | 0.00072 |
N | 35 | A35A | gcG | gcC | 2 | 22 | R.1 | 0.00018 |
N | 35 | A35A | gcG | gcA | 14 | 21 | AY.75 | 0.000784 |
N | 35 | A35A | gcG | gcT | 7 | 21 | AY.75 | 0.000392 |
N | 35 | A35A | gcG | gcT | 20 | 21 | B.1.177.21 | 0.001529 |
N | 35 | A35A | gcG | gcA | 1 | 21 | B.1.177.21 | 0.000076 |
N | 35 | A35A | gcG | gcT | 16 | 21 | B.1.427 | 0.000808 |
N | 35 | A35A | gcG | gcA | 3 | 21 | B.1.427 | 0.000151 |
N | 35 | A35A | gcG | gcC | 2 | 21 | B.1.427 | 0.000101 |
N | 35 | A35V | gCg | gTg | 20 | 20 | AY.46 | 0.002082 |
N | 35 | A35A | gcG | gcT | 18 | 20 | AY.84 | 0.007874 |
N | 35 | A35A | gcG | gcC | 2 | 20 | AY.84 | 0.000875 |
N | 35 | A35A | gcG | gcC | 14 | 20 | B.1.1.216 | 0.012467 |
N | 35 | A35A | gcG | gcT | 4 | 20 | B.1.1.216 | 0.003562 |
N | 35 | A35A | gcG | gcA | 2 | 20 | B.1.1.216 | 0.001781 |
N | 35 | A35T | Gcg | Acg | 20 | 20 | B.1.1.415 | 1 |
N | 35 | A35A | gcG | gcT | 15 | 20 | B.1.1.432 | 0.018987 |
N | 35 | A35A | gcG | gcA | 5 | 20 | B.1.1.432 | 0.006329 |
N | 35 | A35T | Gcg | Acg | 19 | 19 | AY.102 | 0.000504 |
N | 35 | A35A | gcG | gcT | 15 | 19 | AY.121 | 0.00203 |
N | 35 | A35A | gcG | gcA | 2 | 19 | AY.121 | 0.000271 |
N | 35 | A35A | gcG | gcC | 2 | 19 | AY.121 | 0.000271 |
N | 35 | A35T | Gcg | Acg | 19 | 19 | B.1.2 | 0.000167 |
N | 35 | A35S | Gcg | Tcg | 13 | 18 | AY.25 | 0.000078 |
N | 35 | A35S | GcG | TcA | 5 | 18 | AY.25 | 0.00003 |
N | 35 | A35V | gCg | gTg | 18 | 18 | AY.43 | 0.00008 |
N | 35 | A35A | gcG | gcT | 15 | 18 | AY.99.2 | 0.001382 |
N | 35 | A35A | gcG | gcC | 3 | 18 | AY.99.2 | 0.000276 |
N | 35 | A35A | gcG | gcA | 18 | 18 | B.1.1.63 | 0.006944 |
N | 35 | A35A | gcG | gcT | 18 | 18 | B.1.177.4 | 0.003799 |
N | 35 | A35A | gcG | gcA | 18 | 18 | B.1.505 | 0.078947 |
N | 35 | A35S | Gcg | Tcg | 18 | 18 | B.1.526 | 0.000423 |
N | 35 | A35T | Gcg | Acg | 18 | 18 | P.1 | 0.000284 |
N | 35 | A35S | Gcg | Tcg | 17 | 17 | AE.8 | 0.008313 |
N | 35 | A35V | gCg | gTg | 17 | 17 | AY.23 | 0.001186 |
N | 35 | A35T | Gcg | Acg | 17 | 17 | AY.43 | 0.000075 |
N | 35 | A35A | gcG | gcT | 10 | 17 | AY.5.3 | 0.003374 |
N | 35 | A35A | gcG | gcC | 7 | 17 | AY.5.3 | 0.002362 |
N | 35 | A35A | gcG | gcT | 17 | 17 | AY.7.2 | 0.009508 |
N | 35 | A35A | gcG | gcT | 17 | 17 | B.1.1.341 | 1 |
N | 35 | A35V | gCg | gTg | 17 | 17 | B.1.351.2 | 0.005144 |
N | 35 | A35E | gCg | gAg | 16 | 16 | AY.3 | 0.000159 |
N | 35 | A35V | gCg | gTg | 16 | 16 | AY.5 | 0.00033 |
N | 35 | A35A | gcG | gcT | 16 | 16 | AY.64 | 0.009524 |
N | 35 | A35V | gCg | gTg | 16 | 16 | B.1.1.230 | 0.146789 |
N | 35 | A35T | Gcg | Acg | 16 | 16 | B.1.1.317 | 0.006587 |
N | 35 | A35V | gCg | gTg | 16 | 16 | B.1.160 | 0.000499 |
N | 35 | A35V | gCg | gTg | 16 | 16 | B.1.270 | 0.089888 |
N | 35 | A35V | gCg | gTg | 14 | 16 | B.1.351 | 0.000416 |
N | 35 | A35V | gCG | gTT | 2 | 16 | B.1.351 | 0.000059 |
N | 35 | A35A | gcG | gcT | 16 | 16 | B.1.538 | 0.129032 |
N | 35 | A35T | Gcg | Acg | 16 | 16 | B.1.637 | 0.001169 |
N | 35 | A35A | gcG | gcT | 16 | 16 | P.1.2 | 0.018497 |
N | 35 | A35A | gcG | gcT | 14 | 15 | AY.118 | 0.000877 |
N | 35 | A35A | gcG | gcA | 1 | 15 | AY.118 | 0.000063 |
N | 35 | A35A | gcG | gcT | 15 | 15 | AY.73 | 0.00998 |
N | 35 | A35S | GcG | TcT | 15 | 15 | B.1.1.1 | 0.0049 |
N | 35 | A35E | gCg | gAg | 12 | 15 | B.1.1.7 | 0.000011 |
N | 35 | A35E | gCG | gAA | 3 | 15 | B.1.1.7 | 0.000003 |
N | 35 | A35A | gcG | gcT | 15 | 15 | B.1.177.16 | 0.009967 |
N | 35 | A35S | Gcg | Tcg | 15 | 15 | B.1.258 | 0.000998 |
N | 35 | A35A | gcG | gcT | 11 | 15 | B.1.525 | 0.001245 |
N | 35 | A35A | gcG | gcA | 2 | 15 | B.1.525 | 0.000226 |
N | 35 | A35A | gcG | gcC | 2 | 15 | B.1.525 | 0.000226 |
N | 35 | A35A | gcG | gcT | 14 | 15 | B.1.575 | 0.004248 |
N | 35 | A35A | gcG | gcA | 1 | 15 | B.1.575 | 0.000303 |
N | 35 | A35V | gCg | gTg | 15 | 15 | B.33 | 0.319149 |
N | 35 | A35A | gcG | gcT | 13 | 14 | AY.111 | 0.002381 |
N | 35 | A35A | gcG | gcA | 1 | 14 | AY.111 | 0.000183 |
N | 35 | A35S | Gcg | Tcg | 11 | 14 | AY.20 | 0.000428 |
N | 35 | A35S | GcG | TcT | 3 | 14 | AY.20 | 0.000117 |
N | 35 | A35A | gcG | gcT | 14 | 14 | B.1.1.416 | 0.01267 |
N | 35 | A35S | Gcg | Tcg | 14 | 14 | P.1 | 0.000221 |
N | 35 | A35T | Gcg | Acg | 13 | 13 | AY.103 | 0.000081 |
N | 35 | A35A | gcG | gcT | 13 | 13 | AY.34 | 0.001261 |
N | 35 | A35A | gcG | gcA | 8 | 13 | AY.74 | 0.000925 |
N | 35 | A35A | gcG | gcT | 5 | 13 | AY.74 | 0.000578 |
N | 35 | A35A | gcG | gcT | 7 | 13 | B.1.1.28 | 0.002179 |
N | 35 | A35A | gcG | gcC | 5 | 13 | B.1.1.28 | 0.001556 |
N | 35 | A35A | gcG | gcA | 1 | 13 | B.1.1.28 | 0.000311 |
N | 35 | A35A | gcG | gcT | 13 | 13 | P.1.16 | 0.004863 |
N | 35 | A35A | gcG | gcT | 7 | 12 | AY.120.1 | 0.002247 |
N | 35 | A35A | gcG | gcC | 5 | 12 | AY.120.1 | 0.001605 |
N | 35 | A35A | gcG | gcT | 11 | 12 | AY.13 | 0.001771 |
N | 35 | A35A | gcG | gcA | 1 | 12 | AY.13 | 0.000161 |
N | 35 | A35A | gcG | gcT | 12 | 12 | AY.3.1 | 0.001023 |
N | 35 | A35A | gcG | gcT | 12 | 12 | AY.4.5 | 0.00129 |
N | 35 | A35A | gcG | gcT | 11 | 12 | AY.48 | 0.005116 |
N | 35 | A35A | gcG | gcA | 1 | 12 | AY.48 | 0.000465 |
N | 35 | A35A | gcG | gcT | 11 | 12 | AY.54 | 0.001049 |
N | 35 | A35A | gcG | gcA | 1 | 12 | AY.54 | 0.000095 |
N | 35 | A35A | gcG | gcT | 12 | 12 | B.1.1.487 | 0.067039 |
N | 35 | A35A | gcG | gcT | 11 | 12 | B.1.466.2 | 0.004304 |
N | 35 | A35A | gcG | gcA | 1 | 12 | B.1.466.2 | 0.000391 |
N | 35 | A35A | gcG | gcT | 11 | 12 | B.1.470 | 0.015449 |
N | 35 | A35A | gcG | gcA | 1 | 12 | B.1.470 | 0.001404 |
N | 35 | A35A | gcG | gcT | 12 | 12 | B.1.599 | 0.043796 |
N | 35 | A35A | gcG | gcT | 6 | 12 | Q.8 | 0.000989 |
N | 35 | A35A | gcG | gcA | 5 | 12 | Q.8 | 0.000825 |
N | 35 | A35A | gcG | gcC | 1 | 12 | Q.8 | 0.000165 |
N | 35 | A35V | gCg | gTg | 11 | 11 | AY.102 | 0.000292 |
N | 35 | A35A | gcG | gcT | 11 | 11 | AY.15 | 0.024444 |
N | 35 | A35V | gCg | gTg | 11 | 11 | AY.20 | 0.000428 |
N | 35 | A35V | gCg | gTg | 11 | 11 | AY.39 | 0.000272 |
N | 35 | A35A | gcG | gcC | 6 | 11 | B.1.1.1 | 0.00196 |
N | 35 | A35A | gcG | gcT | 3 | 11 | B.1.1.1 | 0.00098 |
N | 35 | A35A | gcG | gcA | 2 | 11 | B.1.1.1 | 0.000653 |
N | 35 | A35V | gCg | gTg | 11 | 11 | B.1.1.263 | 0.017134 |
N | 35 | A35A | gcG | gcT | 9 | 11 | B.1.221 | 0.000639 |
N | 35 | A35A | gcG | gcA | 2 | 11 | B.1.221 | 0.000142 |
N | 35 | A35P | Gcg | Ccg | 10 | 10 | All | 0.000002 |
N | 35 | A35G | gCg | gGg | 8 | 10 | All | 0.000002 |
N | 35 | A35G | gCG | gGC | 1 | 10 | All | 0 |
N | 35 | A35G | gCG | gGT | 1 | 10 | All | 0 |
N | 35 | A35S | Gcg | Tcg | 10 | 10 | AY.103 | 0.000062 |
N | 35 | A35A | gcG | gcT | 8 | 10 | AY.110 | 0.000902 |
N | 35 | A35A | gcG | gcC | 2 | 10 | AY.110 | 0.000225 |
N | 35 | A35A | gcG | gcT | 10 | 10 | AY.19 | 0.011403 |
N | 35 | A35A | gcG | gcT | 8 | 10 | AY.46.4 | 0.001316 |
N | 35 | A35A | gcG | gcC | 1 | 10 | AY.46.4 | 0.000165 |
N | 35 | A35A | gcG | gcA | 1 | 10 | AY.46.4 | 0.000165 |
N | 35 | A35A | gcG | gcT | 9 | 10 | AY.5.4 | 0.00249 |
N | 35 | A35A | gcG | gcA | 1 | 10 | AY.5.4 | 0.000277 |
N | 35 | A35A | gcG | gcC | 7 | 10 | AY.59 | 0.003708 |
N | 35 | A35A | gcG | gcT | 3 | 10 | AY.59 | 0.001589 |
N | 35 | A35V | gCg | gTg | 10 | 10 | AY.61 | 0.001048 |
N | 35 | A35A | gcG | gcT | 10 | 10 | AY.62 | 0.004357 |
N | 35 | A35A | gcG | gcT | 10 | 10 | AY.86 | 0.008299 |
N | 35 | A35A | gcG | gcT | 6 | 10 | AY.89 | 0.029412 |
N | 35 | A35A | gcG | gcC | 4 | 10 | AY.89 | 0.019608 |
N | 35 | A35T | Gcg | Acg | 10 | 10 | B.1.1.416 | 0.00905 |
N | 35 | A35del | GCG | --- | 10 | 10 | B.1.1.7 | 0.000009 |
N | 35 | A35S | Gcg | Tcg | 10 | 10 | B.1.351 | 0.000297 |
N | 35 | A35V | gCg | gTg | 7 | 10 | B.1.36 | 0.001021 |
N | 35 | A35V | gCG | gTT | 3 | 10 | B.1.36 | 0.000438 |
N | 35 | A35A | gcG | gcT | 9 | 10 | B.1.561 | 0.003573 |
N | 35 | A35A | gcG | gcA | 1 | 10 | B.1.561 | 0.000397 |
N | 35 | A35A | gcG | gcT | 8 | 10 | C.37 | 0.000929 |
N | 35 | A35A | gcG | gcC | 1 | 10 | C.37 | 0.000116 |
N | 35 | A35A | gcG | gcA | 1 | 10 | C.37 | 0.000116 |
N | 35 | A35A | gcG | gcA | 7 | 9 | AY.27 | 0.000453 |
N | 35 | A35A | gcG | gcT | 2 | 9 | AY.27 | 0.000129 |
N | 35 | A35V | gCg | gTg | 9 | 9 | AY.4.2 | 0.000195 |
N | 35 | A35A | gcG | gcT | 6 | 9 | AY.4.4 | 0.002455 |
N | 35 | A35A | gcG | gcC | 3 | 9 | AY.4.4 | 0.001227 |
N | 35 | A35T | Gcg | Acg | 9 | 9 | AY.44 | 0.000055 |
N | 35 | A35A | gcG | gcT | 6 | 9 | AY.7.1 | 0.000676 |
N | 35 | A35A | gcG | gcC | 2 | 9 | AY.7.1 | 0.000225 |
N | 35 | A35A | gcG | gcA | 1 | 9 | AY.7.1 | 0.000113 |
N | 35 | A35A | gcG | gcT | 9 | 9 | B.1.1.311 | 0.003223 |
N | 35 | A35A | gcG | gcT | 8 | 9 | B.1.243 | 0.000557 |
N | 35 | A35A | gcG | gcA | 1 | 9 | B.1.243 | 0.00007 |
N | 35 | A35A | gcG | gcA | 8 | 9 | B.1.36.8 | 0.008 |
N | 35 | A35A | gcG | gcC | 1 | 9 | B.1.36.8 | 0.001 |
N | 35 | A35A | gcG | gcT | 5 | 9 | B.1.596 | 0.000436 |
N | 35 | A35A | gcG | gcA | 4 | 9 | B.1.596 | 0.000349 |
N | 35 | A35V | gCg | gTg | 8 | 8 | AY.100 | 0.000368 |
N | 35 | A35A | gcG | gcT | 7 | 8 | AY.35 | 0.001631 |
N | 35 | A35A | gcG | gcA | 1 | 8 | AY.35 | 0.000233 |
N | 35 | A35A | gcG | gcT | 8 | 8 | AY.4.2.1 | 0.001192 |
N | 35 | A35A | gcG | gcT | 8 | 8 | AY.51 | 0.007273 |
N | 35 | A35A | gcG | gcT | 8 | 8 | AY.58 | 0.00726 |
N | 35 | A35T | Gcg | Acg | 8 | 8 | B.1 | 0.000073 |
N | 35 | A35A | gcG | gcT | 8 | 8 | B.1.1.157 | 0.007306 |
N | 35 | A35A | gcG | gcT | 8 | 8 | B.1.1.318 | 0.002414 |
N | 35 | A35A | gcG | gcA | 4 | 8 | B.1.177.56 | 0.00267 |
N | 35 | A35A | gcG | gcT | 4 | 8 | B.1.177.56 | 0.00267 |
N | 35 | A35A | gcG | gcT | 5 | 8 | B.1.456 | 0.01634 |
N | 35 | A35A | gcG | gcC | 2 | 8 | B.1.456 | 0.006536 |
N | 35 | A35A | gcG | gcA | 1 | 8 | B.1.456 | 0.003268 |
N | 35 | A35A | gcG | gcT | 6 | 7 | A.1 | 0.001691 |
N | 35 | A35A | gcG | gcC | 1 | 7 | A.1 | 0.000282 |
N | 35 | A35V | gCg | gTg | 7 | 7 | AY.26 | 0.000198 |
N | 35 | A35S | Gcg | Tcg | 7 | 7 | AY.74 | 0.00081 |
N | 35 | A35A | gcG | gcA | 7 | 7 | B.1.1.265 | 0.022082 |
N | 35 | A35V | gCg | gTg | 6 | 7 | B.1.221 | 0.000426 |
N | 35 | A35V | gCG | gTT | 1 | 7 | B.1.221 | 0.000071 |
N | 35 | A35A | gcG | gcT | 7 | 7 | B.1.234 | 0.000924 |
N | 35 | A35A | gcG | gcT | 7 | 7 | B.1.324 | 0.011236 |
N | 35 | A35A | gcG | gcT | 7 | 7 | B.1.356 | 0.01209 |
N | 35 | A35A | gcG | gcT | 4 | 7 | B.1.36.29 | 0.002069 |
N | 35 | A35A | gcG | gcC | 2 | 7 | B.1.36.29 | 0.001035 |
N | 35 | A35A | gcG | gcA | 1 | 7 | B.1.36.29 | 0.000517 |
N | 35 | A35A | gcG | gcT | 6 | 7 | B.1.369 | 0.001711 |
N | 35 | A35A | gcG | gcA | 1 | 7 | B.1.369 | 0.000285 |
N | 35 | A35A | gcG | gcT | 7 | 7 | B.1.389 | 0.007014 |
N | 35 | A35A | gcG | gcT | 7 | 7 | B.1.619.1 | 0.00449 |
N | 35 | A35A | gcG | gcT | 7 | 7 | B.1.623 | 0.003755 |
N | 35 | A35A | gcG | gcT | 7 | 7 | P.5 | 0.09589 |
N | 35 | A35V | gCg | gTg | 6 | 6 | A | 0.002322 |
N | 35 | A35A | gcG | gcT | 6 | 6 | A.19 | 0.056604 |
N | 35 | A35A | gcG | gcT | 4 | 6 | A.2.5 | 0.001996 |
N | 35 | A35A | gcG | gcC | 2 | 6 | A.2.5 | 0.000998 |
N | 35 | A35V | gCg | gTg | 6 | 6 | AY.113 | 0.000854 |
N | 35 | A35A | gcG | gcT | 6 | 6 | AY.16 | 0.002278 |
N | 35 | A35A | gcG | gcT | 4 | 6 | AY.16.1 | 0.00188 |
N | 35 | A35A | gcG | gcA | 1 | 6 | AY.16.1 | 0.00047 |
N | 35 | A35A | gcG | gcC | 1 | 6 | AY.16.1 | 0.00047 |
N | 35 | A35S | Gcg | Tcg | 6 | 6 | AY.3 | 0.00006 |
N | 35 | A35T | Gcg | Acg | 6 | 6 | AY.39 | 0.000148 |
N | 35 | A35A | gcG | gcC | 6 | 6 | AY.39.1.1 | 0.004348 |
N | 35 | A35A | gcG | gcT | 6 | 6 | AY.41 | 0.001764 |
N | 35 | A35A | gcG | gcT | 6 | 6 | AY.46.2 | 0.003812 |
N | 35 | A35A | gcG | gcT | 6 | 6 | AY.53 | 0.001725 |
N | 35 | A35V | gCg | gTg | 6 | 6 | AY.54 | 0.000572 |
N | 35 | A35V | gCg | gTg | 6 | 6 | AY.56 | 0.009631 |
N | 35 | A35V | gCg | gTg | 6 | 6 | AY.6 | 0.000247 |
N | 35 | A35A | gcG | gcC | 4 | 6 | AY.66 | 0.004278 |
N | 35 | A35A | gcG | gcT | 2 | 6 | AY.66 | 0.002139 |
N | 35 | A35V | gCg | gTg | 6 | 6 | AY.7.1 | 0.000676 |
N | 35 | A35A | gcG | gcT | 5 | 6 | AY.70 | 0.001043 |
N | 35 | A35A | gcG | gcA | 1 | 6 | AY.70 | 0.000209 |
N | 35 | A35V | gCg | gTg | 6 | 6 | AY.99.2 | 0.000553 |
N | 35 | A35A | gcG | gcT | 6 | 6 | B.1.1.526 | 0.021277 |
N | 35 | A35T | Gcg | Acg | 6 | 6 | B.1.313 | 0.039474 |
N | 35 | A35A | gcG | gcT | 6 | 6 | B.1.588 | 0.00546 |
N | 35 | A35A | gcG | gcT | 5 | 6 | B.1.595 | 0.001305 |
N | 35 | A35A | gcG | gcA | 1 | 6 | B.1.595 | 0.000261 |
N | 35 | A35V | gCg | gTg | 6 | 6 | B.1.625 | 0.014118 |
N | 35 | A35A | gcG | gcA | 2 | 6 | P.1.12 | 0.000968 |
N | 35 | A35A | gcG | gcC | 2 | 6 | P.1.12 | 0.000968 |
N | 35 | A35A | gcG | gcT | 2 | 6 | P.1.12 | 0.000968 |
N | 35 | A35A | gcG | gcA | 5 | 6 | P.1.15 | 0.001162 |
N | 35 | A35A | gcG | gcT | 1 | 6 | P.1.15 | 0.000232 |
N | 35 | A35A | gcG | gcT | 4 | 5 | AP.1 | 0.006006 |
N | 35 | A35A | gcG | gcA | 1 | 5 | AP.1 | 0.001502 |
N | 35 | A35A | gcG | gcT | 4 | 5 | AY.1 | 0.001583 |
N | 35 | A35A | gcG | gcC | 1 | 5 | AY.1 | 0.000396 |
N | 35 | A35A | gcG | gcC | 4 | 5 | AY.101 | 0.001962 |
N | 35 | A35A | gcG | gcT | 1 | 5 | AY.101 | 0.00049 |
N | 35 | A35A | gcG | gcT | 5 | 5 | AY.108 | 0.005513 |
N | 35 | A35V | gCg | gTg | 5 | 5 | AY.119 | 0.000177 |
N | 35 | A35A | gcG | gcC | 4 | 5 | AY.12 | 0.001264 |
N | 35 | A35A | gcG | gcT | 1 | 5 | AY.12 | 0.000316 |
N | 35 | A35T | Gcg | Acg | 3 | 5 | AY.3.1 | 0.000256 |
N | 35 | A35T | GcG | AcA | 2 | 5 | AY.3.1 | 0.000171 |
N | 35 | A35A | gcG | gcT | 3 | 5 | AY.37 | 0.000948 |
N | 35 | A35A | gcG | gcA | 2 | 5 | AY.37 | 0.000632 |
N | 35 | A35A | gcG | gcT | 4 | 5 | AY.38 | 0.001997 |
N | 35 | A35A | gcG | gcA | 1 | 5 | AY.38 | 0.000499 |
N | 35 | A35V | gCg | gTg | 5 | 5 | AY.39.1 | 0.000198 |
N | 35 | A35T | Gcg | Acg | 5 | 5 | AY.46.5 | 0.000992 |
N | 35 | A35T | Gcg | Acg | 5 | 5 | AY.6 | 0.000206 |
N | 35 | A35V | gCg | gTg | 5 | 5 | AY.75 | 0.00028 |
N | 35 | A35A | gcG | gcT | 5 | 5 | AY.87 | 0.004163 |
N | 35 | A35V | gCg | gTg | 5 | 5 | B | 0.000639 |
N | 35 | A35S | Gcg | Tcg | 5 | 5 | B.1.1 | 0.000091 |
N | 35 | A35V | gCg | gTg | 5 | 5 | B.1.1.28 | 0.001556 |
N | 35 | A35A | gcG | gcT | 5 | 5 | B.1.1.355 | 0.076923 |
N | 35 | A35T | Gcg | Acg | 5 | 5 | B.1.160 | 0.000156 |
N | 35 | A35A | gcG | gcC | 5 | 5 | B.1.160.26 | 0.012107 |
N | 35 | A35A | gcG | gcT | 3 | 5 | B.1.177.12 | 0.000455 |
N | 35 | A35A | gcG | gcC | 2 | 5 | B.1.177.12 | 0.000303 |
N | 35 | A35S | Gcg | Tcg | 5 | 5 | B.1.446 | 0.1 |
N | 35 | A35A | gcG | gcT | 5 | 5 | B.1.499 | 0.005252 |
N | 35 | A35A | gcG | gcT | 5 | 5 | B.1.564 | 0.002129 |
N | 35 | A35A | gcG | gcT | 5 | 5 | B.1.570 | 0.014706 |
N | 35 | A35A | gcG | gcA | 5 | 5 | B.1.576 | 0.004533 |
N | 35 | A35T | Gcg | Acg | 5 | 5 | B.1.582 | 0.002453 |
N | 35 | A35A | gcG | gcT | 5 | 5 | B.1.625 | 0.011765 |
N | 35 | A35A | gcG | gcT | 3 | 5 | D.2 | 0.000225 |
N | 35 | A35A | gcG | gcC | 2 | 5 | D.2 | 0.00015 |
N | 35 | A35V | gCg | gTg | 5 | 5 | P.1.7 | 0.001596 |
N | 35 | A35del1 | gCg | g-g | 3 | 4 | All | 0.000001 |
N | 35 | A35del1 | gcG | gc- | 1 | 4 | All | 0 |
N | 35 | A35A | gcG | gcT | 3 | 4 | AY.106 | 0.001005 |
N | 35 | A35A | gcG | gcA | 1 | 4 | AY.106 | 0.000335 |
N | 35 | A35A | gcG | gcT | 4 | 4 | AY.24 | 0.001724 |
N | 35 | A35E | gCG | gAA | 3 | 4 | AY.25 | 0.000018 |
N | 35 | A35E | gCg | gAg | 1 | 4 | AY.25 | 0.000006 |
N | 35 | A35V | gCg | gTg | 4 | 4 | AY.29 | 0.000063 |
N | 35 | A35V | gCg | gTg | 4 | 4 | AY.34 | 0.000388 |
N | 35 | A35T | Gcg | Acg | 4 | 4 | AY.42 | 0.000161 |
N | 35 | A35T | Gcg | Acg | 4 | 4 | AY.47 | 0.000124 |
N | 35 | A35del | GCG | --- | 4 | 4 | AY.5 | 0.000083 |
N | 35 | A35A | gcG | gcA | 2 | 4 | AY.67 | 0.000929 |
N | 35 | A35A | gcG | gcT | 2 | 4 | AY.67 | 0.000929 |
N | 35 | A35A | gcG | gcT | 4 | 4 | AY.71 | 0.0019 |
N | 35 | A35A | gcG | gcC | 4 | 4 | AY.79 | 0.004843 |
N | 35 | A35V | gCg | gTg | 4 | 4 | B.1.1.214 | 0.000222 |
N | 35 | A35A | gcG | gcT | 4 | 4 | B.1.1.240 | 0.018779 |
N | 35 | A35A | gcG | gcC | 2 | 4 | B.1.1.25 | 0.001137 |
N | 35 | A35A | gcG | gcA | 1 | 4 | B.1.1.25 | 0.000569 |
N | 35 | A35A | gcG | gcT | 1 | 4 | B.1.1.25 | 0.000569 |
N | 35 | A35A | gcG | gcT | 3 | 4 | B.1.1.294 | 0.003797 |
N | 35 | A35A | gcG | gcA | 1 | 4 | B.1.1.294 | 0.001266 |
N | 35 | A35A | gcG | gcT | 3 | 4 | B.1.1.317 | 0.001235 |
N | 35 | A35A | gcG | gcA | 1 | 4 | B.1.1.317 | 0.000412 |
N | 35 | A35A | gcG | gcT | 2 | 4 | B.1.1.326 | 0.003521 |
N | 35 | A35A | gcG | gcA | 2 | 4 | B.1.1.326 | 0.003521 |
N | 35 | A35A | gcG | gcA | 3 | 4 | B.1.1.33 | 0.001263 |
N | 35 | A35A | gcG | gcT | 1 | 4 | B.1.1.33 | 0.000421 |
N | 35 | A35A | gcG | gcA | 3 | 4 | B.1.1.433 | 0.004274 |
N | 35 | A35A | gcG | gcC | 1 | 4 | B.1.1.433 | 0.001425 |
N | 35 | A35A | gcG | gcA | 4 | 4 | B.1.1.434 | 0.001394 |
N | 35 | A35A | gcG | gcT | 3 | 4 | B.1.1.50 | 0.002037 |
N | 35 | A35A | gcG | gcC | 1 | 4 | B.1.1.50 | 0.000679 |
N | 35 | A35A | gcG | gcT | 4 | 4 | B.1.111 | 0.0047 |
N | 35 | A35A | gcG | gcT | 4 | 4 | B.1.160.14 | 0.008475 |
N | 35 | A35A | gcG | gcT | 4 | 4 | B.1.177.57 | 0.001124 |
N | 35 | A35A | gcG | gcT | 2 | 4 | B.1.177.73 | 0.001133 |
N | 35 | A35A | gcG | gcA | 2 | 4 | B.1.177.73 | 0.001133 |
N | 35 | A35A | gcG | gcA | 3 | 4 | B.1.177.8 | 0.002257 |
N | 35 | A35A | gcG | gcT | 1 | 4 | B.1.177.8 | 0.000752 |
N | 35 | A35G | gCg | gGg | 4 | 4 | B.1.2 | 0.000035 |
N | 35 | A35T | Gcg | Acg | 4 | 4 | B.1.243 | 0.000278 |
N | 35 | A35S | Gcg | Tcg | 4 | 4 | B.1.333 | 0.042105 |
N | 35 | A35V | gCg | gTg | 4 | 4 | B.1.427 | 0.000202 |
N | 35 | A35A | gcG | gcT | 4 | 4 | B.1.453 | 0.012945 |
N | 35 | A35A | gcG | gcT | 4 | 4 | B.1.459 | 0.016327 |
N | 35 | A35A | gcG | gcT | 4 | 4 | B.1.480 | 0.00995 |
N | 35 | A35V | gCg | gTg | 4 | 4 | B.1.497 | 0.001259 |
N | 35 | A35A | gcG | gcT | 4 | 4 | B.3 | 0.003322 |
N | 35 | A35A | gcG | gcT | 4 | 4 | C.36.3 | 0.002269 |
N | 35 | A35A | gcG | gcT | 4 | 4 | P.1.10 | 0.001078 |
N | 35 | A35T | Gcg | Acg | 4 | 4 | P.1.14 | 0.000191 |
N | 35 | A35V | gCg | gTg | 4 | 4 | P.2 | 0.000747 |
N | 35 | A35A | gcG | gcT | 3 | 3 | A.2 | 0.001985 |
N | 35 | A35del2 | GCg | --g | 2 | 3 | All | 0 |
N | 35 | A35del2 | GCG | --C | 1 | 3 | All | 0 |
N | 35 | A35S | Gcg | Tcg | 3 | 3 | AY.101 | 0.001471 |
N | 35 | A35S | Gcg | Tcg | 3 | 3 | AY.102 | 0.00008 |
N | 35 | A35A | gcG | gcT | 3 | 3 | AY.105 | 0.001929 |
N | 35 | A35A | gcG | gcT | 3 | 3 | AY.114 | 0.000693 |
N | 35 | A35A | gcG | gcT | 3 | 3 | AY.116.1 | 0.000934 |
N | 35 | A35A | gcG | gcC | 3 | 3 | AY.2 | 0.001068 |
N | 35 | A35T | Gcg | Acg | 3 | 3 | AY.23 | 0.000209 |
N | 35 | A35T | Gcg | Acg | 3 | 3 | AY.27 | 0.000194 |
N | 35 | A35A | gcG | gcT | 2 | 3 | AY.30 | 0.000791 |
N | 35 | A35A | gcG | gcA | 1 | 3 | AY.30 | 0.000396 |
N | 35 | A35del | GCG | --- | 3 | 3 | AY.4 | 0.000005 |
N | 35 | A35E | gCg | gAg | 2 | 3 | AY.4 | 0.000003 |
N | 35 | A35E | gCG | gAA | 1 | 3 | AY.4 | 0.000002 |
N | 35 | A35del | GCG | --- | 3 | 3 | AY.43 | 0.000013 |
N | 35 | A35S | Gcg | Tcg | 3 | 3 | AY.44 | 0.000018 |
N | 35 | A35T | Gcg | Acg | 3 | 3 | AY.46.6 | 0.000217 |
N | 35 | A35A | gcG | gcT | 2 | 3 | AY.52 | 0.001629 |
N | 35 | A35A | gcG | gcA | 1 | 3 | AY.52 | 0.000814 |
N | 35 | A35A | gcG | gcA | 3 | 3 | AY.56 | 0.004815 |
N | 35 | A35V | gCg | gTg | 3 | 3 | AY.75.1 | 0.000541 |
N | 35 | A35A | gcG | gcT | 3 | 3 | AY.78 | 0.004622 |
N | 35 | A35A | gcG | gcT | 3 | 3 | AY.82 | 0.004071 |
N | 35 | A35A | gcG | gcT | 3 | 3 | AY.93 | 0.000819 |
N | 35 | A35A | gcG | gcT | 3 | 3 | B.1.1.141 | 0.006036 |
N | 35 | A35V | gCg | gTg | 3 | 3 | B.1.1.204 | 0.009119 |
N | 35 | A35A | gcG | gcT | 3 | 3 | B.1.1.220 | 0.005576 |
N | 35 | A35A | gcG | gcT | 3 | 3 | B.1.1.258 | 0.009772 |
N | 35 | A35A | gcG | gcT | 2 | 3 | B.1.1.263 | 0.003115 |
N | 35 | A35A | gcG | gcC | 1 | 3 | B.1.1.263 | 0.001558 |
N | 35 | A35V | gCg | gTg | 3 | 3 | B.1.1.318 | 0.000905 |
N | 35 | A35A | gcG | gcT | 3 | 3 | B.1.1.372 | 0.002066 |
N | 35 | A35V | gCg | gTg | 3 | 3 | B.1.1.383 | 0.1875 |
N | 35 | A35A | gcG | gcC | 2 | 3 | B.1.1.39 | 0.001019 |
N | 35 | A35A | gcG | gcT | 1 | 3 | B.1.1.39 | 0.00051 |
N | 35 | A35V | gCg | gTg | 3 | 3 | B.1.1.434 | 0.001046 |
N | 35 | A35S | Gcg | Tcg | 3 | 3 | B.1.1.519 | 0.000119 |
N | 35 | A35V | gCg | gTg | 3 | 3 | B.1.108 | 0.017442 |
N | 35 | A35V | gCg | gTg | 3 | 3 | B.1.111 | 0.003525 |
N | 35 | A35V | gCg | gTg | 3 | 3 | B.1.177.6 | 0.00293 |
N | 35 | A35A | gcG | gcT | 3 | 3 | B.1.177.79 | 0.007026 |
N | 35 | A35V | gCg | gTg | 3 | 3 | B.1.177.81 | 0.000568 |
N | 35 | A35A | gcG | gcA | 2 | 3 | B.1.311 | 0.000549 |
N | 35 | A35A | gcG | gcT | 1 | 3 | B.1.311 | 0.000275 |
N | 35 | A35A | gcG | gcT | 3 | 3 | B.1.398 | 0.008929 |
N | 35 | A35V | gCg | gTg | 3 | 3 | B.1.429 | 0.000071 |
N | 35 | A35A | gcG | gcT | 3 | 3 | B.1.438.1 | 0.000322 |
N | 35 | A35V | gCg | gTg | 3 | 3 | B.1.526 | 0.000071 |
N | 35 | A35A | gcG | gcT | 3 | 3 | B.1.551 | 0.003871 |
N | 35 | A35A | gcG | gcA | 3 | 3 | B.1.558 | 0.013699 |
N | 35 | A35T | Gcg | Acg | 3 | 3 | B.1.596 | 0.000261 |
N | 35 | A35A | gcG | gcT | 3 | 3 | B.1.9.4 | 0.018405 |
N | 35 | A35A | gcG | gcT | 3 | 3 | B.1.96 | 0.056604 |
N | 35 | A35V | gCg | gTg | 3 | 3 | B.4 | 0.006623 |
N | 35 | A35A | gcG | gcC | 2 | 3 | B.6.6 | 0.001778 |
N | 35 | A35A | gcG | gcT | 1 | 3 | B.6.6 | 0.000889 |
N | 35 | A35A | gcG | gcT | 3 | 3 | C.23 | 0.017442 |
N | 35 | A35V | gCg | gTg | 3 | 3 | C.35 | 0.002322 |
N | 35 | A35A | gcG | gcT | 3 | 3 | L.3 | 0.010638 |
N | 35 | A35A | gcG | gcT | 2 | 3 | N.6 | 0.014184 |
N | 35 | A35A | gcG | gcA | 1 | 3 | N.6 | 0.007092 |
N | 35 | A35A | gcG | gcT | 2 | 3 | P.1.7 | 0.000639 |
N | 35 | A35A | gcG | gcA | 1 | 3 | P.1.7 | 0.000319 |
N | 35 | A35A | gcG | gcT | 3 | 3 | P.6 | 0.009434 |
N | 35 | A35A | gcG | gcT | 3 | 3 | Q.1 | 0.000379 |
N | 35 | A35A | gcG | gcT | 3 | 3 | Q.3 | 0.000435 |
N | 35 | A35A | gcG | gcT | 2 | 3 | W.4 | 0.002703 |
N | 35 | A35A | gcG | gcC | 1 | 3 | W.4 | 0.001351 |
N | 35 | A35T | Gcg | Acg | 2 | 2 | A | 0.000774 |
N | 35 | A35V | gCg | gTg | 2 | 2 | A.2.4 | 0.006734 |
N | 35 | A35A | gcG | gcT | 2 | 2 | A.21 | 0.00554 |
N | 35 | A35A | gcG | gcT | 2 | 2 | A.27 | 0.003311 |
N | 35 | A35A | gcG | gcT | 2 | 2 | AE.6 | 0.076923 |
N | 35 | A35A | gcG | gcA | 2 | 2 | AM.4 | 0.007143 |
N | 35 | A35T | Gcg | Acg | 2 | 2 | AY.100 | 0.000092 |
N | 35 | A35A | gcG | gcA | 2 | 2 | AY.109 | 0.001479 |
N | 35 | A35S | Gcg | Tcg | 2 | 2 | AY.110 | 0.000225 |
N | 35 | A35V | gCg | gTg | 2 | 2 | AY.111 | 0.000366 |
N | 35 | A35S | Gcg | Tcg | 2 | 2 | AY.117 | 0.000169 |
N | 35 | A35S | Gcg | Tcg | 2 | 2 | AY.120 | 0.000074 |
N | 35 | A35T | Gcg | Acg | 2 | 2 | AY.14 | 0.000176 |
N | 35 | A35V | gCg | gTg | 2 | 2 | AY.16 | 0.000759 |
N | 35 | A35A | gcG | gcT | 2 | 2 | AY.22 | 0.004184 |
N | 35 | A35del | GCG | --- | 2 | 2 | AY.23 | 0.000139 |
N | 35 | A35S | Gcg | Tcg | 2 | 2 | AY.26 | 0.000057 |
N | 35 | A35P | Gcg | Ccg | 2 | 2 | AY.29 | 0.000032 |
N | 35 | A35T | Gcg | Acg | 2 | 2 | AY.29 | 0.000032 |
N | 35 | A35A | gcG | gcT | 2 | 2 | AY.29.1 | 0.000441 |
N | 35 | A35S | Gcg | Tcg | 2 | 2 | AY.37 | 0.000632 |
N | 35 | A35S | Gcg | Tcg | 2 | 2 | AY.38 | 0.000999 |
N | 35 | A35S | Gcg | Tcg | 2 | 2 | AY.39 | 0.000049 |
N | 35 | A35A | gcG | gcT | 2 | 2 | AY.4.1 | 0.001475 |
N | 35 | A35S | Gcg | Tcg | 2 | 2 | AY.45 | 0.000243 |
N | 35 | A35V | gCg | gTg | 2 | 2 | AY.45 | 0.000243 |
N | 35 | A35del | GCG | --- | 2 | 2 | AY.46 | 0.000208 |
N | 35 | A35A | gcG | gcT | 2 | 2 | AY.46.1 | 0.002053 |
N | 35 | A35V | gCg | gTg | 2 | 2 | AY.46.6 | 0.000144 |
N | 35 | A35V | gCg | gTg | 2 | 2 | AY.48 | 0.00093 |
N | 35 | A35S | Gcg | Tcg | 2 | 2 | AY.5 | 0.000041 |
N | 35 | A35T | Gcg | Acg | 2 | 2 | AY.53 | 0.000575 |
N | 35 | A35A | gcG | gcT | 2 | 2 | AY.55 | 0.001835 |
N | 35 | A35V | gCg | gTg | 2 | 2 | AY.65 | 0.001066 |
N | 35 | A35T | Gcg | Acg | 2 | 2 | AY.65 | 0.001066 |
N | 35 | A35A | gcG | gcT | 2 | 2 | AY.7 | 0.000392 |
N | 35 | A35V | gCg | gTg | 2 | 2 | AY.72 | 0.002721 |
N | 35 | A35A | gcG | gcT | 2 | 2 | AY.85 | 0.000854 |
N | 35 | A35A | gcG | gcA | 1 | 2 | AY.91 | 0.00073 |
N | 35 | A35A | gcG | gcT | 1 | 2 | AY.91 | 0.00073 |
N | 35 | A35V | gCg | gTg | 2 | 2 | AY.98 | 0.000158 |
N | 35 | A35A | gcG | gcT | 2 | 2 | AY.99 | 0.002099 |
N | 35 | A35A | gcG | gcT | 2 | 2 | AZ.2 | 0.001642 |
N | 35 | A35T | Gcg | Acg | 2 | 2 | B | 0.000256 |
N | 35 | A35S | Gcg | Tcg | 2 | 2 | B | 0.000256 |
N | 35 | A35del1 | gCg | g-g | 2 | 2 | B.1 | 0.000018 |
N | 35 | A35P | Gcg | Ccg | 2 | 2 | B.1 | 0.000018 |
N | 35 | A35E | gCg | gAg | 2 | 2 | B.1 | 0.000018 |
N | 35 | A35V | gCg | gTg | 2 | 2 | B.1.1.1 | 0.000653 |
N | 35 | A35A | gcG | gcA | 1 | 2 | B.1.1.135 | 0.004695 |
N | 35 | A35A | gcG | gcC | 1 | 2 | B.1.1.135 | 0.004695 |
N | 35 | A35A | gcG | gcT | 2 | 2 | B.1.1.186 | 0.006873 |
N | 35 | A35A | gcG | gcA | 2 | 2 | B.1.1.205 | 0.007435 |
N | 35 | A35S | Gcg | Tcg | 2 | 2 | B.1.1.216 | 0.001781 |
N | 35 | A35V | gCg | gTg | 2 | 2 | B.1.1.25 | 0.001137 |
N | 35 | A35A | gcG | gcC | 1 | 2 | B.1.1.284 | 0.000107 |
N | 35 | A35A | gcG | gcT | 1 | 2 | B.1.1.284 | 0.000107 |
N | 35 | A35A | gcG | gcT | 2 | 2 | B.1.1.304 | 0.005618 |
N | 35 | A35T | Gcg | Acg | 2 | 2 | B.1.1.306 | 0.000877 |
N | 35 | A35V | gCg | gTg | 2 | 2 | B.1.1.317 | 0.000823 |
N | 35 | A35V | gCg | gTg | 2 | 2 | B.1.1.337 | 0.007194 |
N | 35 | A35S | Gcg | Tcg | 2 | 2 | B.1.1.339 | 0.021053 |
N | 35 | A35A | gcG | gcA | 1 | 2 | B.1.1.368 | 0.003086 |
N | 35 | A35A | gcG | gcC | 1 | 2 | B.1.1.368 | 0.003086 |
N | 35 | A35A | gcG | gcT | 1 | 2 | B.1.1.389 | 0.006061 |
N | 35 | A35A | gcG | gcA | 1 | 2 | B.1.1.389 | 0.006061 |
N | 35 | A35A | gcG | gcT | 2 | 2 | B.1.1.412 | 0.015267 |
N | 35 | A35A | gcG | gcC | 2 | 2 | B.1.1.461 | 0.024096 |
N | 35 | A35A | gcG | gcT | 1 | 2 | B.1.1.464 | 0.001473 |
N | 35 | A35A | gcG | gcC | 1 | 2 | B.1.1.464 | 0.001473 |
N | 35 | A35T | Gcg | Acg | 2 | 2 | B.1.1.519 | 0.000079 |
N | 35 | A35V | gCg | gTg | 2 | 2 | B.1.1.526 | 0.007092 |
N | 35 | A35A | gcG | gcT | 2 | 2 | B.1.1.70 | 0.000682 |
N | 35 | A35A | gcG | gcT | 2 | 2 | B.1.157 | 0.00597 |
N | 35 | A35A | gcG | gcT | 2 | 2 | B.1.170 | 0.008621 |
N | 35 | A35A | gcG | gcA | 1 | 2 | B.1.177.17 | 0.000821 |
N | 35 | A35A | gcG | gcT | 1 | 2 | B.1.177.17 | 0.000821 |
N | 35 | A35S | Gcg | Tcg | 2 | 2 | B.1.177.20 | 0.003035 |
N | 35 | A35A | gcG | gcT | 2 | 2 | B.1.177.35 | 0.001382 |
N | 35 | A35A | gcG | gcT | 1 | 2 | B.1.177.44 | 0.000519 |
N | 35 | A35A | gcG | gcC | 1 | 2 | B.1.177.44 | 0.000519 |
N | 35 | A35A | gcG | gcA | 2 | 2 | B.1.177.60 | 0.000437 |
N | 35 | A35A | gcG | gcT | 2 | 2 | B.1.178 | 0.047619 |
N | 35 | A35E | gCg | gAg | 2 | 2 | B.1.2 | 0.000018 |
N | 35 | A35A | gcG | gcA | 1 | 2 | B.1.214.2 | 0.0006 |
N | 35 | A35A | gcG | gcT | 1 | 2 | B.1.214.2 | 0.0006 |
N | 35 | A35A | gcG | gcT | 2 | 2 | B.1.218 | 0.010309 |
N | 35 | A35A | gcG | gcT | 1 | 2 | B.1.236 | 0.002053 |
N | 35 | A35A | gcG | gcC | 1 | 2 | B.1.236 | 0.002053 |
N | 35 | A35S | Gcg | Tcg | 2 | 2 | B.1.239 | 0.002442 |
N | 35 | A35T | Gcg | Acg | 2 | 2 | B.1.258 | 0.000133 |
N | 35 | A35A | gcG | gcT | 2 | 2 | B.1.258.24 | 0.021505 |
N | 35 | A35A | gcG | gcT | 2 | 2 | B.1.258.3 | 0.00335 |
N | 35 | A35A | gcG | gcT | 2 | 2 | B.1.260 | 0.006689 |
N | 35 | A35A | gcG | gcA | 1 | 2 | B.1.349 | 0.000715 |
N | 35 | A35A | gcG | gcT | 1 | 2 | B.1.349 | 0.000715 |
N | 35 | A35A | gcG | gcT | 2 | 2 | B.1.351.3 | 0.001753 |
N | 35 | A35V | gCg | gTg | 2 | 2 | B.1.351.5 | 0.001199 |
N | 35 | A35A | gcG | gcA | 2 | 2 | B.1.351.5 | 0.001199 |
N | 35 | A35T | Gcg | Acg | 2 | 2 | B.1.36 | 0.000292 |
N | 35 | A35A | gcG | gcC | 1 | 2 | B.1.36.24 | 0.006173 |
N | 35 | A35A | gcG | gcT | 1 | 2 | B.1.36.24 | 0.006173 |
N | 35 | A35T | Gcg | Acg | 2 | 2 | B.1.36.8 | 0.002 |
N | 35 | A35A | gcG | gcA | 2 | 2 | B.1.361 | 0.002577 |
N | 35 | A35T | Gcg | Acg | 2 | 2 | B.1.381 | 0.015625 |
N | 35 | A35V | gCg | gTg | 2 | 2 | B.1.398 | 0.005952 |
N | 35 | A35A | gcG | gcT | 2 | 2 | B.1.400 | 0.000858 |
N | 35 | A35V | gCg | gTg | 2 | 2 | B.1.415.1 | 0.015152 |
N | 35 | A35A | gcG | gcC | 1 | 2 | B.1.416 | 0.001269 |
N | 35 | A35A | gcG | gcA | 1 | 2 | B.1.416 | 0.001269 |
N | 35 | A35A | gcG | gcT | 2 | 2 | B.1.422 | 0.001625 |
N | 35 | A35A | gcG | gcT | 2 | 2 | B.1.428 | 0.002041 |
N | 35 | A35A | gcG | gcT | 2 | 2 | B.1.436 | 0.002058 |
N | 35 | A35A | gcG | gcT | 2 | 2 | B.1.443 | 0.009346 |
N | 35 | A35A | gcG | gcA | 2 | 2 | B.1.468 | 0.011429 |
N | 35 | A35A | gcG | gcT | 2 | 2 | B.1.492 | 0.014085 |
N | 35 | A35A | gcG | gcT | 2 | 2 | B.1.549 | 0.014388 |
N | 35 | A35A | gcG | gcT | 2 | 2 | B.1.582 | 0.000981 |
N | 35 | A35V | gCg | gTg | 2 | 2 | B.1.595 | 0.000522 |
N | 35 | A35S | Gcg | Tcg | 2 | 2 | B.1.596 | 0.000174 |
N | 35 | A35V | gCg | gTg | 2 | 2 | B.1.609 | 0.000959 |
N | 35 | A35del | GCG | --- | 2 | 2 | B.1.617.2 | 0.000008 |
N | 35 | A35G | gCG | gGT | 1 | 2 | B.1.617.2 | 0.000004 |
N | 35 | A35G | gCg | gGg | 1 | 2 | B.1.617.2 | 0.000004 |
N | 35 | A35A | gcG | gcA | 2 | 2 | B.1.620 | 0.001892 |
N | 35 | A35V | gCg | gTg | 2 | 2 | B.1.621.1 | 0.001012 |
N | 35 | A35A | gcG | gcC | 1 | 2 | B.3.1 | 0.001658 |
N | 35 | A35A | gcG | gcA | 1 | 2 | B.3.1 | 0.001658 |
N | 35 | A35A | gcG | gcT | 2 | 2 | B.40 | 0.000729 |
N | 35 | A35S | Gcg | Tcg | 2 | 2 | C.36.3.1 | 0.005435 |
N | 35 | A35S | Gcg | Tcg | 2 | 2 | C.37 | 0.000232 |
N | 35 | A35V | gCg | gTg | 2 | 2 | C.37 | 0.000232 |
N | 35 | A35A | gcG | gcT | 2 | 2 | N.5 | 0.003534 |
N | 35 | A35V | gCg | gTg | 2 | 2 | P.1.10 | 0.000539 |
N | 35 | A35V | gCg | gTg | 2 | 2 | P.1.13 | 0.001797 |
N | 35 | A35S | Gcg | Tcg | 2 | 2 | P.1.14 | 0.000096 |
N | 35 | A35E | gCG | gAA | 2 | 2 | P.1.16 | 0.000748 |
N | 35 | A35V | gCg | gTg | 2 | 2 | Q.8 | 0.00033 |
N | 35 | A35T | Gcg | Acg | 1 | 1 | A.1 | 0.000282 |
N | 35 | A35V | gCg | gTg | 1 | 1 | A.2 | 0.000662 |
N | 35 | A35A | gcG | gcT | 1 | 1 | A.2.5.2 | 0.001572 |
N | 35 | A35S | GcG | TcC | 1 | 1 | A.23.1 | 0.000704 |
N | 35 | A35V | gCg | gTg | 1 | 1 | A.27 | 0.001656 |
N | 35 | A35T | Gcg | Acg | 1 | 1 | AD.2 | 0.000219 |
N | 35 | A35A | gcG | gcT | 1 | 1 | AE.1 | 0.011364 |
N | 35 | A35A | gcG | gcT | 1 | 1 | AE.3 | 0.032258 |
N | 35 | A35A | gcG | gcT | 1 | 1 | AE.4 | 0.043478 |
N | 35 | A35A | gcG | gcT | 1 | 1 | AE.8 | 0.000489 |
N | 35 | A35A | gcG | gcA | 1 | 1 | AU.1 | 0.001266 |
N | 35 | A35A | gcG | gcT | 1 | 1 | AY.10 | 0.00053 |
N | 35 | A35E | gCg | gAg | 1 | 1 | AY.103 | 0.000006 |
N | 35 | A35A | gcG | gcC | 1 | 1 | AY.104 | 0.001984 |
N | 35 | A35T | Gcg | Acg | 1 | 1 | AY.106 | 0.000335 |
N | 35 | A35A | gcG | gcT | 1 | 1 | AY.107 | 0.000466 |
N | 35 | A35A | gcG | gcT | 1 | 1 | AY.11 | 0.001339 |
N | 35 | A35T | Gcg | Acg | 1 | 1 | AY.113 | 0.000142 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | AY.113 | 0.000142 |
N | 35 | A35T | Gcg | Acg | 1 | 1 | AY.118 | 0.000063 |
N | 35 | A35E | gCg | gAg | 1 | 1 | AY.118 | 0.000063 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | AY.119 | 0.000035 |
N | 35 | A35T | Gcg | Acg | 1 | 1 | AY.119 | 0.000035 |
N | 35 | A35del | GCG | --- | 1 | 1 | AY.120 | 0.000037 |
N | 35 | A35V | gCg | gTg | 1 | 1 | AY.120 | 0.000037 |
N | 35 | A35V | gCg | gTg | 1 | 1 | AY.121 | 0.000135 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | AY.13 | 0.000161 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | AY.14 | 0.000088 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | AY.16 | 0.00038 |
N | 35 | A35V | gCg | gTg | 1 | 1 | AY.18 | 0.010101 |
N | 35 | A35A | gcG | gcA | 1 | 1 | AY.23.1 | 0.000417 |
N | 35 | A35V | gCg | gTg | 1 | 1 | AY.24 | 0.000431 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | AY.24 | 0.000431 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | AY.27 | 0.000065 |
N | 35 | A35T | Gcg | Acg | 1 | 1 | AY.28 | 0.00189 |
N | 35 | A35E | gCg | gAg | 1 | 1 | AY.29 | 0.000016 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | AY.29 | 0.000016 |
N | 35 | A35P | Gcg | Ccg | 1 | 1 | AY.3 | 0.00001 |
N | 35 | A35G | gCg | gGg | 1 | 1 | AY.3 | 0.00001 |
N | 35 | A35P | Gcg | Ccg | 1 | 1 | AY.3.1 | 0.000085 |
N | 35 | A35V | gCg | gTg | 1 | 1 | AY.3.1 | 0.000085 |
N | 35 | A35V | gCg | gTg | 1 | 1 | AY.30 | 0.000396 |
N | 35 | A35A | gcG | gcT | 1 | 1 | AY.31 | 0.018519 |
N | 35 | A35V | gCg | gTg | 1 | 1 | AY.32 | 0.000532 |
N | 35 | A35V | gCg | gTg | 1 | 1 | AY.33 | 0.000067 |
N | 35 | A35V | gCg | gTg | 1 | 1 | AY.35 | 0.000233 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | AY.36 | 0.000148 |
N | 35 | A35T | Gcg | Acg | 1 | 1 | AY.38 | 0.000499 |
N | 35 | A35L | GCg | TTg | 1 | 1 | AY.39 | 0.000025 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | AY.39.1 | 0.00004 |
N | 35 | A35G | gCg | gGg | 1 | 1 | AY.4 | 0.000002 |
N | 35 | A35V | gCg | gTg | 1 | 1 | AY.4.2.1 | 0.000149 |
N | 35 | A35del | GCG | --- | 1 | 1 | AY.4.4 | 0.000409 |
N | 35 | A35V | gCg | gTg | 1 | 1 | AY.4.5 | 0.000107 |
N | 35 | A35T | Gcg | Acg | 1 | 1 | AY.4.5 | 0.000107 |
N | 35 | A35V | gCg | gTg | 1 | 1 | AY.40 | 0.000964 |
N | 35 | A35T | Gcg | Acg | 1 | 1 | AY.40 | 0.000964 |
N | 35 | A35L | GCg | TTg | 1 | 1 | AY.44 | 0.000006 |
N | 35 | A35E | gCG | gAA | 1 | 1 | AY.44 | 0.000006 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | AY.46 | 0.000104 |
N | 35 | A35T | Gcg | Acg | 1 | 1 | AY.46 | 0.000104 |
N | 35 | A35V | gCg | gTg | 1 | 1 | AY.46.4 | 0.000165 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | AY.46.4 | 0.000165 |
N | 35 | A35V | gCg | gTg | 1 | 1 | AY.46.5 | 0.000198 |
N | 35 | A35A | gcG | gcT | 1 | 1 | AY.46.5 | 0.000198 |
N | 35 | A35del | GCG | --- | 1 | 1 | AY.46.6 | 0.000072 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | AY.46.6 | 0.000072 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | AY.47 | 0.000031 |
N | 35 | A35A | gcG | gcT | 1 | 1 | AY.49 | 0.003195 |
N | 35 | A35T | Gcg | Acg | 1 | 1 | AY.5 | 0.000021 |
N | 35 | A35del | GCG | --- | 1 | 1 | AY.5.3 | 0.000337 |
N | 35 | A35T | Gcg | Acg | 1 | 1 | AY.5.3 | 0.000337 |
N | 35 | A35V | gCg | gTg | 1 | 1 | AY.5.4 | 0.000277 |
N | 35 | A35A | gcG | gcT | 1 | 1 | AY.50 | 0.000799 |
N | 35 | A35A | gcG | gcT | 1 | 1 | AY.57 | 0.000656 |
N | 35 | A35A | gcG | gcT | 1 | 1 | AY.60 | 0.000938 |
N | 35 | A35del | GCG | --- | 1 | 1 | AY.60 | 0.000938 |
N | 35 | A35S | GcG | TcT | 1 | 1 | AY.61 | 0.000105 |
N | 35 | A35A | gcG | gcT | 1 | 1 | AY.65 | 0.000533 |
N | 35 | A35V | gCg | gTg | 1 | 1 | AY.69 | 0.000187 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | AY.7 | 0.000196 |
N | 35 | A35T | Gcg | Acg | 1 | 1 | AY.70 | 0.000209 |
N | 35 | A35T | Gcg | Acg | 1 | 1 | AY.71 | 0.000475 |
N | 35 | A35A | gcG | gcT | 1 | 1 | AY.72 | 0.001361 |
N | 35 | A35V | gCg | gTg | 1 | 1 | AY.73 | 0.000665 |
N | 35 | A35V | gCg | gTg | 1 | 1 | AY.74 | 0.000116 |
N | 35 | A35del2 | GCg | --g | 1 | 1 | AY.75.1 | 0.00018 |
N | 35 | A35T | Gcg | Acg | 1 | 1 | AY.75.1 | 0.00018 |
N | 35 | A35A | gcG | gcA | 1 | 1 | AY.76 | 0.004831 |
N | 35 | A35T | Gcg | Acg | 1 | 1 | AY.77 | 0.001127 |
N | 35 | A35A | gcG | gcA | 1 | 1 | AY.83 | 0.001724 |
N | 35 | A35A | gcG | gcT | 1 | 1 | AY.88 | 0.000884 |
N | 35 | A35V | gCg | gTg | 1 | 1 | AY.88 | 0.000884 |
N | 35 | A35V | gCg | gTg | 1 | 1 | AY.9 | 0.000068 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | AY.9 | 0.000068 |
N | 35 | A35del | GCG | --- | 1 | 1 | AY.9.1 | 0.000084 |
N | 35 | A35V | gCg | gTg | 1 | 1 | AY.9.1 | 0.000084 |
N | 35 | A35V | gCg | gTg | 1 | 1 | AY.9.2 | 0.000037 |
N | 35 | A35T | Gcg | Acg | 1 | 1 | AY.9.2 | 0.000037 |
N | 35 | A35A | gcG | gcT | 1 | 1 | AY.90 | 0.000684 |
N | 35 | A35T | Gcg | Acg | 1 | 1 | AY.91 | 0.00073 |
N | 35 | A35V | gCg | gTg | 1 | 1 | AY.92 | 0.000287 |
N | 35 | A35V | gCg | gTg | 1 | 1 | AY.96 | 0.002075 |
N | 35 | A35A | gcG | gcT | 1 | 1 | AY.96 | 0.002075 |
N | 35 | A35T | Gcg | Acg | 1 | 1 | AY.96 | 0.002075 |
N | 35 | A35E | gCG | gAA | 1 | 1 | AY.97 | 0.001701 |
N | 35 | A35E | gCg | gAg | 1 | 1 | AY.98.1 | 0.000048 |
N | 35 | A35V | gCg | gTg | 1 | 1 | AY.98.1 | 0.000048 |
N | 35 | A35del | GCG | --- | 1 | 1 | AY.99 | 0.001049 |
N | 35 | A35A | gcG | gcT | 1 | 1 | AY.99.1 | 0.001553 |
N | 35 | A35V | gCg | gTg | 1 | 1 | AY.99.1 | 0.001553 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | AY.99.2 | 0.000092 |
N | 35 | A35T | Gcg | Acg | 1 | 1 | AY.99.2 | 0.000092 |
N | 35 | A35del | GCG | --- | 1 | 1 | B.1 | 0.000009 |
N | 35 | A35del | GCG | --- | 1 | 1 | B.1.1 | 0.000018 |
N | 35 | A35G | gCg | gGg | 1 | 1 | B.1.1 | 0.000018 |
N | 35 | A35A | gcG | gcC | 1 | 1 | B.1.1.10 | 0.001115 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | B.1.1.113 | 0.006993 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.1.123 | 0.017857 |
N | 35 | A35del | GCG | --- | 1 | 1 | B.1.1.139 | 0.022727 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.1.148 | 0.008772 |
N | 35 | A35A | gcG | gcA | 1 | 1 | B.1.1.153 | 0.001095 |
N | 35 | A35A | gcG | gcC | 1 | 1 | B.1.1.16 | 0.055556 |
N | 35 | A35A | gcG | gcC | 1 | 1 | B.1.1.161 | 0.003534 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | B.1.1.189 | 0.001513 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.1.210 | 0.005714 |
N | 35 | A35del | GCG | --- | 1 | 1 | B.1.1.216 | 0.00089 |
N | 35 | A35T | Gcg | Acg | 1 | 1 | B.1.1.216 | 0.00089 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.1.217 | 0.003636 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.1.231 | 0.003096 |
N | 35 | A35A | gcG | gcA | 1 | 1 | B.1.1.241 | 0.00207 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | B.1.1.279 | 0.001121 |
N | 35 | A35T | Gcg | Acg | 1 | 1 | B.1.1.284 | 0.000107 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | B.1.1.284 | 0.000107 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.1.294 | 0.001266 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.1.302 | 0.002075 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.1.306 | 0.000438 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | B.1.1.306 | 0.000438 |
N | 35 | A35A | gcG | gcA | 1 | 1 | B.1.1.307 | 0.002532 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | B.1.1.311 | 0.000358 |
N | 35 | A35A | gcG | gcA | 1 | 1 | B.1.1.312 | 0.001912 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.1.316 | 0.000925 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.1.316 | 0.000925 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | B.1.1.323 | 0.014085 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.1.326 | 0.001761 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | B.1.1.33 | 0.000421 |
N | 35 | A35A | gcG | gcA | 1 | 1 | B.1.1.348 | 0.000796 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.1.351 | 0.002793 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.1.351 | 0.002793 |
N | 35 | A35A | gcG | gcA | 1 | 1 | B.1.1.359 | 0.027778 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.1.366 | 0.015873 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.1.369 | 0.000446 |
N | 35 | A35T | Gcg | Acg | 1 | 1 | B.1.1.37 | 0.000193 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.1.37 | 0.000193 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.1.37 | 0.000193 |
N | 35 | A35S | GcG | TcT | 1 | 1 | B.1.1.372 | 0.000689 |
N | 35 | A35A | gcG | gcA | 1 | 1 | B.1.1.376 | 0.005952 |
N | 35 | A35A | gcG | gcC | 1 | 1 | B.1.1.398 | 0.003226 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.1.413 | 0.006897 |
N | 35 | A35A | gcG | gcC | 1 | 1 | B.1.1.413 | 0.006897 |
N | 35 | A35A | gcG | gcA | 1 | 1 | B.1.1.428 | 0.009434 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | B.1.1.434 | 0.000349 |
N | 35 | A35A | gcG | gcC | 1 | 1 | B.1.1.462 | 0.008621 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.1.463 | 0.0625 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | B.1.1.485 | 0.016667 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | B.1.1.50 | 0.000679 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.1.517 | 0.006803 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.1.523 | 0.001563 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.1.523 | 0.001563 |
N | 35 | A35S | GcG | TcT | 1 | 1 | B.1.1.528 | 0.004808 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.1.53 | 0.013699 |
N | 35 | A35T | Gcg | Acg | 1 | 1 | B.1.1.63 | 0.000386 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.1.63 | 0.000386 |
N | 35 | A35P | Gcg | Ccg | 1 | 1 | B.1.1.63 | 0.000386 |
N | 35 | A35P | Gcg | Ccg | 1 | 1 | B.1.1.7 | 0.000001 |
N | 35 | A35G | gCG | gGC | 1 | 1 | B.1.1.7 | 0.000001 |
N | 35 | A35A | gcG | gcC | 1 | 1 | B.1.1.83 | 0.00271 |
N | 35 | A35A | gcG | gcA | 1 | 1 | B.1.1.98 | 0.018519 |
N | 35 | A35A | gcG | gcA | 1 | 1 | B.1.147 | 0.000756 |
N | 35 | A35A | gcG | gcA | 1 | 1 | B.1.153 | 0.018868 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | B.1.157 | 0.002985 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.160.30 | 0.002976 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.160.8 | 0.001289 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.167 | 0.007812 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.170 | 0.00431 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | B.1.177 | 0.000013 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.177.10 | 0.000878 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.177.12 | 0.000152 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.177.19 | 0.001431 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.177.20 | 0.001517 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.177.42 | 0.000894 |
N | 35 | A35A | gcG | gcC | 1 | 1 | B.1.177.43 | 0.001477 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.177.5 | 0.001242 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.177.50 | 0.004695 |
N | 35 | A35T | Gcg | Acg | 1 | 1 | B.1.177.6 | 0.000977 |
N | 35 | A35del | GCG | --- | 1 | 1 | B.1.177.63 | 0.002703 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.177.65 | 0.000665 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.177.73 | 0.000566 |
N | 35 | A35del | GCG | --- | 1 | 1 | B.1.177.75 | 0.001041 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.177.75 | 0.001041 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.177.77 | 0.000726 |
N | 35 | A35A | gcG | gcC | 1 | 1 | B.1.177.86 | 0.000183 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.177.9 | 0.001332 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.181 | 0.019608 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.206 | 0.000816 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.213 | 0.014925 |
N | 35 | A35A | gcG | gcC | 1 | 1 | B.1.214 | 0.003663 |
N | 35 | A35del | GCG | --- | 1 | 1 | B.1.221 | 0.000071 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | B.1.221 | 0.000071 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.23 | 0.006061 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.232 | 0.000537 |
N | 35 | A35del1 | gcG | gc- | 1 | 1 | B.1.234 | 0.000132 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.234 | 0.000132 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | B.1.243 | 0.00007 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.247 | 0.014925 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.260 | 0.003344 |
N | 35 | A35A | gcG | gcA | 1 | 1 | B.1.265 | 0.001271 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.289 | 0.00266 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | B.1.289 | 0.00266 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.291 | 0.019231 |
N | 35 | A35T | Gcg | Acg | 1 | 1 | B.1.298 | 0.002114 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.332 | 0.003497 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.348 | 0.018182 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.349 | 0.000715 |
N | 35 | A35E | gCG | gAA | 1 | 1 | B.1.351 | 0.00003 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | B.1.351.2 | 0.000303 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.351.3 | 0.000876 |
N | 35 | A35A | gcG | gcC | 1 | 1 | B.1.36.10 | 0.004785 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.36.16 | 0.001425 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | B.1.36.17 | 0.000494 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.36.22 | 0.001208 |
N | 35 | A35T | Gcg | Acg | 1 | 1 | B.1.36.22 | 0.001208 |
N | 35 | A35T | Gcg | Acg | 1 | 1 | B.1.36.29 | 0.000517 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.36.31 | 0.001751 |
N | 35 | A35A | gcG | gcA | 1 | 1 | B.1.36.36 | 0.000602 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.36.36 | 0.000602 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.36.37 | 0.002778 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.367 | 0.000792 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | B.1.367 | 0.000792 |
N | 35 | A35A | gcG | gcA | 1 | 1 | B.1.375 | 0.00082 |
N | 35 | A35A | gcG | gcA | 1 | 1 | B.1.385 | 0.010638 |
N | 35 | A35A | gcG | gcA | 1 | 1 | B.1.390 | 0.010638 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.393 | 0.028571 |
N | 35 | A35A | gcG | gcA | 1 | 1 | B.1.402 | 0.009804 |
N | 35 | A35T | Gcg | Acg | 1 | 1 | B.1.403 | 0.003268 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.404 | 0.001302 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.422 | 0.000812 |
N | 35 | A35T | Gcg | Acg | 1 | 1 | B.1.427 | 0.00005 |
N | 35 | A35E | gCg | gAg | 1 | 1 | B.1.429 | 0.000024 |
N | 35 | A35T | Gcg | Acg | 1 | 1 | B.1.429 | 0.000024 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.438.1 | 0.000107 |
N | 35 | A35T | Gcg | Acg | 1 | 1 | B.1.438.1 | 0.000107 |
N | 35 | A35del | GCG | --- | 1 | 1 | B.1.439 | 0.005917 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.459 | 0.004082 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.462 | 0.007246 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.471 | 0.002732 |
N | 35 | A35A | gcG | gcA | 1 | 1 | B.1.474 | 0.001901 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.501 | 0.007353 |
N | 35 | A35A | gcG | gcA | 1 | 1 | B.1.509 | 0.000866 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.509 | 0.000866 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.518 | 0.011765 |
N | 35 | A35A | gcG | gcC | 1 | 1 | B.1.523 | 0.002451 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.524 | 0.001406 |
N | 35 | A35P | Gcg | Ccg | 1 | 1 | B.1.525 | 0.000113 |
N | 35 | A35A | gcG | gcA | 1 | 1 | B.1.537 | 0.02 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.560 | 0.00463 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.564 | 0.000426 |
N | 35 | A35A | gcG | gcA | 1 | 1 | B.1.566 | 0.019231 |
N | 35 | A35A | gcG | gcA | 1 | 1 | B.1.568 | 0.001111 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.574 | 0.002151 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.575.1 | 0.002439 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.577 | 0.000687 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | B.1.582 | 0.000491 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.582 | 0.000491 |
N | 35 | A35del1 | gCg | g-g | 1 | 1 | B.1.596 | 0.000087 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.597 | 0.00463 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.606 | 0.006024 |
N | 35 | A35del2 | GCg | --g | 1 | 1 | B.1.606 | 0.006024 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.610 | 0.003546 |
N | 35 | A35del2 | GCG | --C | 1 | 1 | B.1.617.2 | 0.000004 |
N | 35 | A35L | GCg | TTg | 1 | 1 | B.1.617.2 | 0.000004 |
N | 35 | A35E | gCg | gAg | 1 | 1 | B.1.617.2 | 0.000004 |
N | 35 | A35T | Gcg | Acg | 1 | 1 | B.1.621 | 0.000089 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.621 | 0.000089 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.621.1 | 0.000506 |
N | 35 | A35P | Gcg | Ccg | 1 | 1 | B.1.628 | 0.000352 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.1.628 | 0.000352 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.1.634 | 0.003425 |
N | 35 | A35A | gcG | gcA | 1 | 1 | B.1.9 | 0.006173 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.18 | 0.043478 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.29 | 0.003509 |
N | 35 | A35A | gcG | gcA | 1 | 1 | B.39 | 0.002331 |
N | 35 | A35E | gCg | gAg | 1 | 1 | B.4 | 0.002208 |
N | 35 | A35T | Gcg | Acg | 1 | 1 | B.40 | 0.000364 |
N | 35 | A35V | gCg | gTg | 1 | 1 | B.40 | 0.000364 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.41 | 0.008 |
N | 35 | A35A | gcG | gcT | 1 | 1 | B.45 | 0.003831 |
N | 35 | A35A | gcG | gcT | 1 | 1 | C.1.2 | 0.004255 |
N | 35 | A35V | gCg | gTg | 1 | 1 | C.16 | 0.00106 |
N | 35 | A35A | gcG | gcT | 1 | 1 | C.18 | 0.002591 |
N | 35 | A35V | gCg | gTg | 1 | 1 | C.18 | 0.002591 |
N | 35 | A35V | gCg | gTg | 1 | 1 | C.32 | 0.023256 |
N | 35 | A35S | GcG | TcT | 1 | 1 | C.35 | 0.000774 |
N | 35 | A35A | gcG | gcT | 1 | 1 | C.35 | 0.000774 |
N | 35 | A35A | gcG | gcC | 1 | 1 | M.3 | 0.076923 |
N | 35 | A35V | gCg | gTg | 1 | 1 | N.5 | 0.001767 |
N | 35 | A35A | gcG | gcT | 1 | 1 | P.1.1 | 0.000318 |
N | 35 | A35V | gCg | gTg | 1 | 1 | P.1.12 | 0.000484 |
N | 35 | A35V | gCg | gTg | 1 | 1 | P.1.14 | 0.000048 |
N | 35 | A35A | gcG | gcT | 1 | 1 | P.1.17 | 0.000162 |
N | 35 | A35V | gCg | gTg | 1 | 1 | P.1.17 | 0.000162 |
N | 35 | A35A | gcG | gcT | 1 | 1 | P.1.4 | 0.000977 |
N | 35 | A35V | gCg | gTg | 1 | 1 | P.1.4 | 0.000977 |
N | 35 | A35T | Gcg | Acg | 1 | 1 | P.1.7 | 0.000319 |
N | 35 | A35A | gcG | gcT | 1 | 1 | P.1.8 | 0.004785 |
N | 35 | A35A | gcG | gcT | 1 | 1 | P.1.9 | 0.004808 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | P.1.9 | 0.004808 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | P.2 | 0.000187 |
N | 35 | A35V | gCg | gTg | 1 | 1 | P.3 | 0.001595 |
N | 35 | A35A | gcG | gcA | 1 | 1 | P.3 | 0.001595 |
N | 35 | A35V | gCg | gTg | 1 | 1 | Q.3 | 0.000145 |
N | 35 | A35A | gcG | gcC | 1 | 1 | Q.4 | 0.000455 |
N | 35 | A35S | Gcg | Tcg | 1 | 1 | R.1 | 0.00009 |
N | 35 | A35T | Gcg | Acg | 1 | 1 | R.1 | 0.00009 |
N | 35 | A35V | gCg | gTg | 1 | 1 | R.1 | 0.00009 |
N | 35 | A35T | Gcg | Acg | 1 | 1 | S.1 | 0.00495 |
N | 35 | A35A | gcG | gcC | 1 | 1 | U.1 | 0.012821 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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