CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
N | 348 | D348H | nonsyn | Gat | Cat | 2159 | 2157 | 0.999074 | 29315-29317 | |
N | 348 | D348H | nonsyn | GaT | CaC | 2159 | 2 | 0.000926355 | 29315-29317 | |
N | 348 | D348D | syn | gaT | gaC | 1580 | 1580 | 1 | 29315-29317 | |
N | 348 | D348Y | nonsyn | Gat | Tat | 1571 | 1570 | 0.999363 | 29315-29317 | |
N | 348 | D348Y | nonsyn | GaT | TaC | 1571 | 1 | 0.000636537 | 29315-29317 | |
N | 348 | D348N | nonsyn | Gat | Aat | 166 | 165 | 0.993976 | 29315-29317 | |
N | 348 | D348N | nonsyn | GaT | AaC | 166 | 1 | 0.0060241 | 29315-29317 | |
N | 348 | D348G | nonsyn | gAt | gGt | 152 | 150 | 0.986842 | 29315-29317 | |
N | 348 | D348G | nonsyn | gAT | gGG | 152 | 1 | 0.00657895 | 29315-29317 | |
N | 348 | D348G | nonsyn | gAT | gGA | 152 | 1 | 0.00657895 | 29315-29317 | |
N | 348 | D348A | nonsyn | gAt | gCt | 99 | 99 | 1 | 29315-29317 | |
N | 348 | D348V | nonsyn | gAt | gTt | 28 | 26 | 0.928571 | 29315-29317 | |
N | 348 | D348V | nonsyn | gAT | gTC | 28 | 1 | 0.0357143 | 29315-29317 | |
N | 348 | D348V | nonsyn | gAT | gTA | 28 | 1 | 0.0357143 | 29315-29317 | |
N | 348 | D348E | nonsyn | gaT | gaG | 24 | 16 | 0.666667 | 29315-29317 | |
N | 348 | D348E | nonsyn | gaT | gaA | 24 | 8 | 0.333333 | 29315-29317 | |
N | 348 | D348del | del | GAT | --- | 16 | 16 | 1 | 29315-29317 | |
N | 348 | D348del2 | del | GAt | --t | 3 | 2 | 0.666667 | 29315-29317 | |
N | 348 | D348del2 | del | gAT | g-- | 3 | 1 | 0.333333 | 29315-29317 | |
N | 348 | D348I | nonsyn | GAt | ATt | 3 | 1 | 0.333333 | 29315-29317 | |
N | 348 | D348I | nonsyn | GAT | ATC | 3 | 1 | 0.333333 | 29315-29317 | |
N | 348 | D348I | nonsyn | GAT | ATA | 3 | 1 | 0.333333 | 29315-29317 | |
N | 348 | D348S | nonsyn | GAt | AGt | 2 | 2 | 1 | 29315-29317 | |
N | 348 | D348K | nonsyn | GaT | AaA | 1 | 1 | 1 | 29315-29317 | |
N | 348 | D348P | nonsyn | GAt | CCt | 1 | 1 | 1 | 29315-29317 | |
N | 348 | D348Q | nonsyn | GaT | CaA | 1 | 1 | 1 | 29315-29317 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
N | 348 | D348H | Gat | Cat | 2157 | 2159 | All | 0.000413 |
N | 348 | D348H | GaT | CaC | 2 | 2159 | All | 0 |
N | 348 | D348D | gaT | gaC | 1580 | 1580 | All | 0.000302 |
N | 348 | D348Y | Gat | Tat | 1570 | 1571 | All | 0.0003 |
N | 348 | D348Y | GaT | TaC | 1 | 1571 | All | 0 |
N | 348 | D348D | gaT | gaC | 631 | 631 | B.1.1.432 | 0.798734 |
N | 348 | D348H | Gat | Cat | 468 | 468 | AU.3 | 0.987342 |
N | 348 | D348H | Gat | Cat | 273 | 273 | AY.4 | 0.000425 |
N | 348 | D348Y | Gat | Tat | 261 | 261 | B.1.1.7 | 0.000234 |
N | 348 | D348H | Gat | Cat | 227 | 227 | B.1.1.7 | 0.000203 |
N | 348 | D348Y | Gat | Tat | 202 | 202 | AY.4 | 0.000314 |
N | 348 | D348H | Gat | Cat | 179 | 179 | P.1 | 0.00282 |
N | 348 | D348N | Gat | Aat | 165 | 166 | All | 0.000032 |
N | 348 | D348N | GaT | AaC | 1 | 166 | All | 0 |
N | 348 | D348G | gAt | gGt | 150 | 152 | All | 0.000029 |
N | 348 | D348G | gAT | gGG | 1 | 152 | All | 0 |
N | 348 | D348G | gAT | gGA | 1 | 152 | All | 0 |
N | 348 | D348D | gaT | gaC | 128 | 128 | B.1.1.7 | 0.000115 |
N | 348 | D348Y | Gat | Tat | 113 | 113 | AY.3 | 0.001124 |
N | 348 | D348Y | Gat | Tat | 113 | 113 | B.1.617.2 | 0.000425 |
N | 348 | D348H | Gat | Cat | 102 | 102 | AY.43 | 0.000452 |
N | 348 | D348A | gAt | gCt | 99 | 99 | All | 0.000019 |
N | 348 | D348A | gAt | gCt | 87 | 87 | AY.23 | 0.006068 |
N | 348 | D348Y | Gat | Tat | 86 | 86 | AY.7 | 0.016856 |
N | 348 | D348D | gaT | gaC | 83 | 83 | AY.4 | 0.000129 |
N | 348 | D348D | gaT | gaC | 72 | 72 | AY.5 | 0.001487 |
N | 348 | D348D | gaT | gaC | 71 | 71 | B.1.617.2 | 0.000267 |
N | 348 | D348D | gaT | gaC | 69 | 69 | B.1 | 0.000632 |
N | 348 | D348N | Gat | Aat | 61 | 61 | B.1.1.7 | 0.000055 |
N | 348 | D348D | gaT | gaC | 60 | 60 | P.1.14 | 0.002868 |
N | 348 | D348D | gaT | gaC | 59 | 59 | B.1.2 | 0.00052 |
N | 348 | D348H | Gat | Cat | 54 | 54 | B.1.617.2 | 0.000203 |
N | 348 | D348H | Gat | Cat | 47 | 47 | AY.44 | 0.000286 |
N | 348 | D348H | Gat | Cat | 43 | 44 | AY.103 | 0.000267 |
N | 348 | D348H | GaT | CaC | 1 | 44 | AY.103 | 0.000006 |
N | 348 | D348Y | Gat | Tat | 43 | 43 | AY.43 | 0.000191 |
N | 348 | D348Y | Gat | Tat | 43 | 43 | B.1.160 | 0.001341 |
N | 348 | D348H | Gat | Cat | 41 | 41 | B.1.1.519 | 0.001628 |
N | 348 | D348Y | Gat | Tat | 40 | 40 | B.1.2 | 0.000352 |
N | 348 | D348Y | Gat | Tat | 39 | 39 | AY.44 | 0.000237 |
N | 348 | D348Y | Gat | Tat | 38 | 38 | AY.25 | 0.000229 |
N | 348 | D348Y | Gat | Tat | 37 | 37 | B.1 | 0.000339 |
N | 348 | D348Y | Gat | Tat | 37 | 37 | B.1.526 | 0.00087 |
N | 348 | D348H | Gat | Cat | 36 | 36 | B.1.383 | 0.324324 |
N | 348 | D348H | Gat | Cat | 35 | 35 | AY.33 | 0.002337 |
N | 348 | D348G | gAt | gGt | 35 | 35 | B.1.1.7 | 0.000031 |
N | 348 | D348H | Gat | Cat | 35 | 35 | B.1.2 | 0.000308 |
N | 348 | D348D | gaT | gaC | 32 | 32 | AY.103 | 0.000199 |
N | 348 | D348Y | Gat | Tat | 31 | 31 | B.1.1.214 | 0.001719 |
N | 348 | D348H | Gat | Cat | 29 | 29 | B.1 | 0.000266 |
N | 348 | D348V | gAt | gTt | 26 | 28 | All | 0.000005 |
N | 348 | D348V | gAT | gTC | 1 | 28 | All | 0 |
N | 348 | D348V | gAT | gTA | 1 | 28 | All | 0 |
N | 348 | D348H | Gat | Cat | 27 | 27 | AY.39.1 | 0.00107 |
N | 348 | D348Y | Gat | Tat | 26 | 26 | B.1.1 | 0.000472 |
N | 348 | D348G | gAt | gGt | 25 | 25 | AY.120 | 0.000929 |
N | 348 | D348E | gaT | gaG | 16 | 24 | All | 0.000003 |
N | 348 | D348E | gaT | gaA | 8 | 24 | All | 0.000002 |
N | 348 | D348N | Gat | Aat | 24 | 24 | AY.4 | 0.000037 |
N | 348 | D348H | Gat | Cat | 24 | 24 | B.1.1.176 | 0.010545 |
N | 348 | D348D | gaT | gaC | 24 | 24 | B.1.22 | 0.031621 |
N | 348 | D348H | Gat | Cat | 21 | 21 | AY.20 | 0.000816 |
N | 348 | D348H | Gat | Cat | 21 | 21 | B.1.429 | 0.000494 |
N | 348 | D348H | Gat | Cat | 21 | 21 | P.1.15 | 0.004879 |
N | 348 | D348D | gaT | gaC | 20 | 20 | AY.44 | 0.000122 |
N | 348 | D348H | Gat | Cat | 19 | 19 | AY.3 | 0.000189 |
N | 348 | D348D | gaT | gaC | 19 | 19 | AY.71 | 0.009026 |
N | 348 | D348H | Gat | Cat | 19 | 19 | B.1.1 | 0.000345 |
N | 348 | D348D | gaT | gaC | 17 | 17 | B.1.1 | 0.000308 |
N | 348 | D348Y | Gat | Tat | 17 | 17 | B.1.351 | 0.000505 |
N | 348 | D348Y | Gat | Tat | 17 | 17 | P.1 | 0.000268 |
N | 348 | D348del | GAT | --- | 16 | 16 | All | 0.000003 |
N | 348 | D348D | gaT | gaC | 16 | 16 | AY.26 | 0.000453 |
N | 348 | D348Y | Gat | Tat | 15 | 15 | AY.39 | 0.000371 |
N | 348 | D348H | Gat | Cat | 15 | 15 | AY.85 | 0.006408 |
N | 348 | D348D | gaT | gaC | 15 | 15 | B.1.1.37 | 0.002893 |
N | 348 | D348Y | Gat | Tat | 14 | 14 | AY.117 | 0.001183 |
N | 348 | D348H | Gat | Cat | 14 | 14 | AY.25 | 0.000084 |
N | 348 | D348G | gAt | gGt | 14 | 14 | AY.4 | 0.000022 |
N | 348 | D348H | Gat | Cat | 14 | 14 | AY.5 | 0.000289 |
N | 348 | D348H | Gat | Cat | 14 | 14 | AY.69 | 0.002613 |
N | 348 | D348D | gaT | gaC | 14 | 14 | B.1.177.60 | 0.003058 |
N | 348 | D348Y | Gat | Tat | 14 | 14 | B.1.351.2 | 0.004236 |
N | 348 | D348H | Gat | Cat | 14 | 14 | D.2 | 0.001051 |
N | 348 | D348H | Gat | Cat | 13 | 13 | AY.120 | 0.000483 |
N | 348 | D348H | Gat | Cat | 13 | 13 | AY.4.3 | 0.010943 |
N | 348 | D348H | Gat | Cat | 13 | 13 | B.1.525 | 0.001471 |
N | 348 | D348D | gaT | gaC | 13 | 13 | P.1 | 0.000205 |
N | 348 | D348D | gaT | gaC | 12 | 12 | AY.43 | 0.000053 |
N | 348 | D348D | gaT | gaC | 12 | 12 | AY.99.2 | 0.001106 |
N | 348 | D348Y | Gat | Tat | 12 | 12 | B.1.1.519 | 0.000477 |
N | 348 | D348Y | Gat | Tat | 12 | 12 | B.1.311 | 0.003295 |
N | 348 | D348D | gaT | gaC | 12 | 12 | P.1.17 | 0.001941 |
N | 348 | D348Y | Gat | Tat | 11 | 11 | AY.33 | 0.000735 |
N | 348 | D348V | gAt | gTt | 11 | 11 | B.1.1.7 | 0.00001 |
N | 348 | D348D | gaT | gaC | 11 | 11 | B.1.177 | 0.000145 |
N | 348 | D348H | Gat | Cat | 11 | 11 | B.1.221 | 0.000781 |
N | 348 | D348Y | Gat | Tat | 10 | 10 | AY.102 | 0.000265 |
N | 348 | D348G | gAt | gGt | 10 | 10 | AY.25 | 0.00006 |
N | 348 | D348H | Gat | Cat | 10 | 10 | AY.98.1 | 0.000484 |
N | 348 | D348G | gAt | gGt | 10 | 10 | B.1 | 0.000092 |
N | 348 | D348Y | Gat | Tat | 10 | 10 | B.1.1.222 | 0.00204 |
N | 348 | D348H | Gat | Cat | 10 | 10 | B.1.177 | 0.000132 |
N | 348 | D348Y | Gat | Tat | 10 | 10 | B.1.177 | 0.000132 |
N | 348 | D348H | Gat | Cat | 10 | 10 | B.1.466.2 | 0.003912 |
N | 348 | D348Y | Gat | Tat | 9 | 9 | AY.47 | 0.00028 |
N | 348 | D348H | Gat | Cat | 9 | 9 | AY.75 | 0.000504 |
N | 348 | D348N | Gat | Aat | 9 | 9 | B.1.1.519 | 0.000357 |
N | 348 | D348Y | Gat | Tat | 9 | 9 | B.1.177.12 | 0.001365 |
N | 348 | D348G | gAt | gGt | 9 | 9 | B.1.313 | 0.059211 |
N | 348 | D348H | Gat | Cat | 9 | 9 | B.1.596 | 0.000784 |
N | 348 | D348D | gaT | gaC | 8 | 8 | AY.102 | 0.000212 |
N | 348 | D348Y | Gat | Tat | 8 | 8 | AY.20 | 0.000311 |
N | 348 | D348D | gaT | gaC | 8 | 8 | AY.25 | 0.000048 |
N | 348 | D348Y | Gat | Tat | 8 | 8 | AY.42 | 0.000322 |
N | 348 | D348H | Gat | Cat | 8 | 8 | B.1.427 | 0.000404 |
N | 348 | D348N | Gat | Aat | 8 | 8 | B.1.429 | 0.000188 |
N | 348 | D348H | Gat | Cat | 7 | 7 | AY.16 | 0.002658 |
N | 348 | D348D | gaT | gaC | 7 | 7 | AY.3 | 0.00007 |
N | 348 | D348D | gaT | gaC | 7 | 7 | AY.33 | 0.000467 |
N | 348 | D348H | Gat | Cat | 7 | 7 | AY.39 | 0.000173 |
N | 348 | D348D | gaT | gaC | 7 | 7 | AY.4.2 | 0.000152 |
N | 348 | D348Y | Gat | Tat | 7 | 7 | AY.98.1 | 0.000339 |
N | 348 | D348H | Gat | Cat | 7 | 7 | B.1.1.372 | 0.004821 |
N | 348 | D348D | gaT | gaC | 7 | 7 | B.1.36 | 0.001021 |
N | 348 | D348H | Gat | Cat | 7 | 7 | B.1.526 | 0.000165 |
N | 348 | D348Y | Gat | Tat | 7 | 7 | B.1.558 | 0.031963 |
N | 348 | D348G | gAt | gGt | 6 | 7 | B.1.617.2 | 0.000023 |
N | 348 | D348G | gAT | gGG | 1 | 7 | B.1.617.2 | 0.000004 |
N | 348 | D348Y | Gat | Tat | 7 | 7 | P.1.16 | 0.002619 |
N | 348 | D348H | Gat | Cat | 6 | 6 | AY.102 | 0.000159 |
N | 348 | D348D | gaT | gaC | 6 | 6 | AY.23 | 0.000418 |
N | 348 | D348H | Gat | Cat | 6 | 6 | AY.23 | 0.000418 |
N | 348 | D348Y | Gat | Tat | 6 | 6 | AY.5 | 0.000124 |
N | 348 | D348Y | Gat | Tat | 6 | 6 | AY.82 | 0.008141 |
N | 348 | D348H | Gat | Cat | 6 | 6 | B.1.1.284 | 0.000644 |
N | 348 | D348D | gaT | gaC | 6 | 6 | B.1.111 | 0.007051 |
N | 348 | D348H | Gat | Cat | 6 | 6 | B.1.409 | 0.004687 |
N | 348 | D348Y | Gat | Tat | 6 | 6 | B.1.429 | 0.000141 |
N | 348 | D348H | Gat | Cat | 6 | 6 | B.1.497 | 0.001889 |
N | 348 | D348Y | Gat | Tat | 6 | 6 | B.1.637 | 0.000438 |
N | 348 | D348N | Gat | Aat | 4 | 5 | 0.222222 | |
N | 348 | D348N | GaT | AaC | 1 | 5 | 0.055556 | |
N | 348 | D348D | gaT | gaC | 5 | 5 | AY.120.1 | 0.001605 |
N | 348 | D348Y | Gat | Tat | 5 | 5 | AY.14 | 0.00044 |
N | 348 | D348Y | Gat | Tat | 5 | 5 | AY.26 | 0.000142 |
N | 348 | D348D | gaT | gaC | 5 | 5 | B | 0.000639 |
N | 348 | D348Y | Gat | Tat | 5 | 5 | B.1.1.67 | 0.022831 |
N | 348 | D348Y | Gat | Tat | 5 | 5 | B.1.221 | 0.000355 |
N | 348 | D348H | Gat | Cat | 5 | 5 | B.1.243 | 0.000348 |
N | 348 | D348Y | Gat | Tat | 5 | 5 | B.1.617.1 | 0.000645 |
N | 348 | D348N | Gat | Aat | 5 | 5 | B.1.617.2 | 0.000019 |
N | 348 | D348Y | Gat | Tat | 5 | 5 | B.1.621 | 0.000443 |
N | 348 | D348H | Gat | Cat | 5 | 5 | B.1.634 | 0.017123 |
N | 348 | D348D | gaT | gaC | 5 | 5 | C.37 | 0.00058 |
N | 348 | D348H | Gat | Cat | 5 | 5 | P.1.12 | 0.00242 |
N | 348 | D348H | Gat | Cat | 5 | 5 | P.1.14 | 0.000239 |
N | 348 | D348G | gAt | gGt | 4 | 4 | AY.103 | 0.000025 |
N | 348 | D348Y | Gat | Tat | 4 | 4 | AY.119 | 0.000141 |
N | 348 | D348Y | Gat | Tat | 4 | 4 | AY.12 | 0.001264 |
N | 348 | D348Y | Gat | Tat | 4 | 4 | AY.121 | 0.000541 |
N | 348 | D348H | Gat | Cat | 4 | 4 | AY.26 | 0.000113 |
N | 348 | D348Y | Gat | Tat | 4 | 4 | AY.29 | 0.000063 |
N | 348 | D348Y | Gat | Tat | 4 | 4 | AY.32 | 0.00213 |
N | 348 | D348G | gAt | gGt | 4 | 4 | AY.39 | 0.000099 |
N | 348 | D348D | gaT | gaC | 4 | 4 | AY.39.1 | 0.000158 |
N | 348 | D348N | Gat | Aat | 4 | 4 | AY.43 | 0.000018 |
N | 348 | D348H | Gat | Cat | 4 | 4 | AY.61 | 0.000419 |
N | 348 | D348A | gAt | gCt | 4 | 4 | AY.9.2 | 0.000147 |
N | 348 | D348H | Gat | Cat | 4 | 4 | AY.99.2 | 0.000369 |
N | 348 | D348D | gaT | gaC | 4 | 4 | B.1.1.158 | 0.04878 |
N | 348 | D348D | gaT | gaC | 4 | 4 | B.1.1.216 | 0.003562 |
N | 348 | D348Y | Gat | Tat | 4 | 4 | B.1.1.301 | 0.004717 |
N | 348 | D348Y | Gat | Tat | 4 | 4 | B.1.1.318 | 0.001207 |
N | 348 | D348Y | Gat | Tat | 4 | 4 | B.1.110.3 | 0.002874 |
N | 348 | D348H | Gat | Cat | 4 | 4 | B.1.128 | 0.002541 |
N | 348 | D348Y | Gat | Tat | 4 | 4 | B.1.128 | 0.002541 |
N | 348 | D348Y | Gat | Tat | 4 | 4 | B.1.177.21 | 0.000306 |
N | 348 | D348Y | Gat | Tat | 4 | 4 | B.1.36 | 0.000584 |
N | 348 | D348H | Gat | Cat | 4 | 4 | B.1.36.26 | 0.011429 |
N | 348 | D348H | Gat | Cat | 4 | 4 | B.1.459 | 0.016327 |
N | 348 | D348Y | Gat | Tat | 4 | 4 | B.1.596 | 0.000349 |
N | 348 | D348Y | Gat | Tat | 4 | 4 | P.1.1 | 0.001271 |
N | 348 | D348D | gaT | gaC | 4 | 4 | P.1.4 | 0.003906 |
N | 348 | D348H | Gat | Cat | 4 | 4 | Q.1 | 0.000505 |
N | 348 | D348V | gAT | gTC | 1 | 3 | 0.055556 | |
N | 348 | D348I | GAt | ATt | 1 | 3 | 0.055556 | |
N | 348 | D348V | gAT | gTA | 1 | 3 | 0.055556 | |
N | 348 | D348V | gAt | gTt | 1 | 3 | 0.055556 | |
N | 348 | D348I | GAT | ATC | 1 | 3 | 0.055556 | |
N | 348 | D348I | GAT | ATA | 1 | 3 | 0.055556 | |
N | 348 | D348D | gaT | gaC | 3 | 3 | A | 0.001161 |
N | 348 | D348D | gaT | gaC | 3 | 3 | A.28 | 0.007937 |
N | 348 | D348del2 | GAt | --t | 2 | 3 | All | 0 |
N | 348 | D348I | GAt | ATt | 1 | 3 | All | 0 |
N | 348 | D348del2 | gAT | g-- | 1 | 3 | All | 0 |
N | 348 | D348I | GAT | ATC | 1 | 3 | All | 0 |
N | 348 | D348I | GAT | ATA | 1 | 3 | All | 0 |
N | 348 | D348H | Gat | Cat | 3 | 3 | AY.118 | 0.000188 |
N | 348 | D348N | Gat | Aat | 3 | 3 | AY.20 | 0.000117 |
N | 348 | D348N | Gat | Aat | 3 | 3 | AY.25 | 0.000018 |
N | 348 | D348Y | Gat | Tat | 3 | 3 | AY.3.1 | 0.000256 |
N | 348 | D348H | Gat | Cat | 3 | 3 | AY.30 | 0.001187 |
N | 348 | D348Y | Gat | Tat | 3 | 3 | AY.34 | 0.000291 |
N | 348 | D348D | gaT | gaC | 3 | 3 | AY.35 | 0.000699 |
N | 348 | D348H | Gat | Cat | 3 | 3 | AY.4.2 | 0.000065 |
N | 348 | D348G | gAt | gGt | 3 | 3 | AY.4.2.1 | 0.000447 |
N | 348 | D348Y | Gat | Tat | 3 | 3 | AY.4.5 | 0.000322 |
N | 348 | D348H | Gat | Cat | 3 | 3 | AY.42 | 0.000121 |
N | 348 | D348H | Gat | Cat | 3 | 3 | AY.46.6 | 0.000217 |
N | 348 | D348H | Gat | Cat | 3 | 3 | AY.47 | 0.000093 |
N | 348 | D348H | Gat | Cat | 3 | 3 | AY.6 | 0.000123 |
N | 348 | D348Y | Gat | Tat | 3 | 3 | AY.9.1 | 0.000251 |
N | 348 | D348H | Gat | Cat | 3 | 3 | AY.98 | 0.000237 |
N | 348 | D348D | gaT | gaC | 3 | 3 | B.1.1.159 | 0.014019 |
N | 348 | D348D | gaT | gaC | 3 | 3 | B.1.1.220 | 0.005576 |
N | 348 | D348D | gaT | gaC | 3 | 3 | B.1.1.222 | 0.000612 |
N | 348 | D348D | gaT | gaC | 3 | 3 | B.1.1.244 | 0.046154 |
N | 348 | D348Y | Gat | Tat | 3 | 3 | B.1.1.25 | 0.001706 |
N | 348 | D348H | Gat | Cat | 3 | 3 | B.1.1.526 | 0.010638 |
N | 348 | D348Y | Gat | Tat | 3 | 3 | B.1.1.70 | 0.001023 |
N | 348 | D348E | gaT | gaG | 3 | 3 | B.1.177 | 0.00004 |
N | 348 | D348E | gaT | gaG | 3 | 3 | B.1.177.10 | 0.002634 |
N | 348 | D348Y | Gat | Tat | 3 | 3 | B.1.199 | 0.012397 |
N | 348 | D348Y | Gat | Tat | 3 | 3 | B.1.243 | 0.000209 |
N | 348 | D348Y | Gat | Tat | 3 | 3 | B.1.258 | 0.0002 |
N | 348 | D348G | gAt | gGt | 3 | 3 | B.1.36 | 0.000438 |
N | 348 | D348H | Gat | Cat | 3 | 3 | B.1.36.29 | 0.001552 |
N | 348 | D348H | Gat | Cat | 3 | 3 | B.1.36.8 | 0.003 |
N | 348 | D348D | gaT | gaC | 3 | 3 | B.1.375 | 0.002459 |
N | 348 | D348Y | Gat | Tat | 3 | 3 | B.1.427 | 0.000151 |
N | 348 | D348D | gaT | gaC | 3 | 3 | B.1.466.2 | 0.001174 |
N | 348 | D348Y | Gat | Tat | 3 | 3 | B.1.561 | 0.001191 |
N | 348 | D348D | gaT | gaC | 3 | 3 | B.1.596 | 0.000261 |
N | 348 | D348E | gaT | gaA | 2 | 3 | B.1.617.2 | 0.000008 |
N | 348 | D348E | gaT | gaG | 1 | 3 | B.1.617.2 | 0.000004 |
N | 348 | D348H | Gat | Cat | 3 | 3 | B.1.621 | 0.000266 |
N | 348 | D348Y | Gat | Tat | 3 | 3 | B.27 | 0.046154 |
N | 348 | D348N | Gat | Aat | 3 | 3 | C.38 | 0.024194 |
N | 348 | D348N | Gat | Aat | 3 | 3 | P.1 | 0.000047 |
N | 348 | D348Y | Gat | Tat | 3 | 3 | P.1.14 | 0.000143 |
N | 348 | D348del | GAT | --- | 2 | 2 | 0.111111 | |
N | 348 | D348S | GAt | AGt | 2 | 2 | All | 0 |
N | 348 | D348H | Gat | Cat | 2 | 2 | AU.1 | 0.002532 |
N | 348 | D348Y | Gat | Tat | 2 | 2 | AY.10 | 0.00106 |
N | 348 | D348Y | Gat | Tat | 2 | 2 | AY.100 | 0.000092 |
N | 348 | D348Y | Gat | Tat | 2 | 2 | AY.103 | 0.000012 |
N | 348 | D348N | Gat | Aat | 2 | 2 | AY.103 | 0.000012 |
N | 348 | D348H | Gat | Cat | 2 | 2 | AY.108 | 0.002205 |
N | 348 | D348H | Gat | Cat | 2 | 2 | AY.119 | 0.000071 |
N | 348 | D348Y | Gat | Tat | 2 | 2 | AY.120 | 0.000074 |
N | 348 | D348Y | Gat | Tat | 2 | 2 | AY.13 | 0.000322 |
N | 348 | D348D | gaT | gaC | 2 | 2 | AY.20 | 0.000078 |
N | 348 | D348Y | Gat | Tat | 2 | 2 | AY.23 | 0.000139 |
N | 348 | D348N | Gat | Aat | 2 | 2 | AY.26 | 0.000057 |
N | 348 | D348Y | Gat | Tat | 2 | 2 | AY.27 | 0.000129 |
N | 348 | D348Y | Gat | Tat | 2 | 2 | AY.28 | 0.003781 |
N | 348 | D348G | gAt | gGt | 2 | 2 | AY.29 | 0.000032 |
N | 348 | D348D | gaT | gaC | 2 | 2 | AY.3.1 | 0.000171 |
N | 348 | D348E | gaT | gaA | 2 | 2 | AY.33 | 0.000134 |
N | 348 | D348D | gaT | gaC | 2 | 2 | AY.37 | 0.000632 |
N | 348 | D348V | gAt | gTt | 2 | 2 | AY.4 | 0.000003 |
N | 348 | D348Y | Gat | Tat | 2 | 2 | AY.4.2 | 0.000043 |
N | 348 | D348G | gAt | gGt | 1 | 2 | AY.44 | 0.000006 |
N | 348 | D348G | gAT | gGA | 1 | 2 | AY.44 | 0.000006 |
N | 348 | D348Y | Gat | Tat | 2 | 2 | AY.45 | 0.000243 |
N | 348 | D348Y | Gat | Tat | 2 | 2 | AY.46 | 0.000208 |
N | 348 | D348H | Gat | Cat | 2 | 2 | AY.46.4 | 0.000329 |
N | 348 | D348D | gaT | gaC | 2 | 2 | AY.47 | 0.000062 |
N | 348 | D348Y | Gat | Tat | 2 | 2 | AY.48 | 0.00093 |
N | 348 | D348H | Gat | Cat | 2 | 2 | AY.5.4 | 0.000553 |
N | 348 | D348Y | Gat | Tat | 2 | 2 | AY.53 | 0.000575 |
N | 348 | D348D | gaT | gaC | 2 | 2 | AY.6 | 0.000082 |
N | 348 | D348Y | Gat | Tat | 2 | 2 | AY.62 | 0.000871 |
N | 348 | D348N | Gat | Aat | 2 | 2 | AY.63 | 0.000774 |
N | 348 | D348D | gaT | gaC | 2 | 2 | AY.69 | 0.000373 |
N | 348 | D348Y | Gat | Tat | 2 | 2 | AY.74 | 0.000231 |
N | 348 | D348N | Gat | Aat | 2 | 2 | AY.75.1 | 0.000361 |
N | 348 | D348Y | Gat | Tat | 2 | 2 | AY.9 | 0.000135 |
N | 348 | D348H | Gat | Cat | 2 | 2 | AY.9.2 | 0.000073 |
N | 348 | D348Y | Gat | Tat | 2 | 2 | B.1.1.117 | 0.019417 |
N | 348 | D348Y | Gat | Tat | 2 | 2 | B.1.1.207 | 0.002364 |
N | 348 | D348H | Gat | Cat | 2 | 2 | B.1.1.222 | 0.000408 |
N | 348 | D348H | Gat | Cat | 2 | 2 | B.1.1.25 | 0.001137 |
N | 348 | D348Y | Gat | Tat | 2 | 2 | B.1.1.263 | 0.003115 |
N | 348 | D348H | Gat | Cat | 2 | 2 | B.1.1.294 | 0.002532 |
N | 348 | D348H | Gat | Cat | 2 | 2 | B.1.1.33 | 0.000842 |
N | 348 | D348Y | Gat | Tat | 2 | 2 | B.1.1.354 | 0.008772 |
N | 348 | D348Y | Gat | Tat | 2 | 2 | B.1.1.39 | 0.001019 |
N | 348 | D348Y | Gat | Tat | 2 | 2 | B.1.1.4 | 0.005952 |
N | 348 | D348N | Gat | Aat | 2 | 2 | B.1.160 | 0.000062 |
N | 348 | D348H | Gat | Cat | 2 | 2 | B.1.177.73 | 0.001133 |
N | 348 | D348H | Gat | Cat | 2 | 2 | B.1.177.8 | 0.001505 |
N | 348 | D348G | gAt | gGt | 2 | 2 | B.1.2 | 0.000018 |
N | 348 | D348E | gaT | gaA | 1 | 2 | B.1.2 | 0.000009 |
N | 348 | D348E | gaT | gaG | 1 | 2 | B.1.2 | 0.000009 |
N | 348 | D348D | gaT | gaC | 2 | 2 | B.1.206 | 0.001631 |
N | 348 | D348N | Gat | Aat | 2 | 2 | B.1.221 | 0.000142 |
N | 348 | D348H | Gat | Cat | 2 | 2 | B.1.240 | 0.000431 |
N | 348 | D348H | Gat | Cat | 2 | 2 | B.1.258.10 | 0.022727 |
N | 348 | D348Y | Gat | Tat | 2 | 2 | B.1.305 | 0.004301 |
N | 348 | D348N | Gat | Aat | 2 | 2 | B.1.351 | 0.000059 |
N | 348 | D348H | Gat | Cat | 2 | 2 | B.1.351 | 0.000059 |
N | 348 | D348H | Gat | Cat | 2 | 2 | B.1.400 | 0.000858 |
N | 348 | D348H | Gat | Cat | 2 | 2 | B.1.575 | 0.000607 |
N | 348 | D348H | Gat | Cat | 2 | 2 | B.1.593 | 0.021739 |
N | 348 | D348G | gAt | gGt | 2 | 2 | B.1.600 | 0.011696 |
N | 348 | D348H | Gat | Cat | 2 | 2 | B.1.619.1 | 0.001283 |
N | 348 | D348H | Gat | Cat | 2 | 2 | B.6 | 0.00182 |
N | 348 | D348H | Gat | Cat | 2 | 2 | C.1 | 0.004785 |
N | 348 | D348Y | Gat | Tat | 2 | 2 | C.37 | 0.000232 |
N | 348 | D348G | gAt | gGt | 2 | 2 | D.2 | 0.00015 |
N | 348 | D348G | gAt | gGt | 2 | 2 | P.1 | 0.000032 |
N | 348 | D348H | Gat | Cat | 2 | 2 | P.1.2 | 0.002312 |
N | 348 | D348H | Gat | Cat | 2 | 2 | Q.8 | 0.00033 |
N | 348 | D348D | gaT | gaC | 2 | 2 | R.1 | 0.00018 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | 0.055556 | |
N | 348 | D348D | gaT | gaC | 1 | 1 | 0.055556 | |
N | 348 | D348E | gaT | gaA | 1 | 1 | 0.055556 | |
N | 348 | D348K | GaT | AaA | 1 | 1 | 0.055556 | |
N | 348 | D348Y | Gat | Tat | 1 | 1 | A | 0.000387 |
N | 348 | D348N | Gat | Aat | 1 | 1 | A | 0.000387 |
N | 348 | D348A | gAt | gCt | 1 | 1 | A.2 | 0.000662 |
N | 348 | D348H | Gat | Cat | 1 | 1 | A.2 | 0.000662 |
N | 348 | D348N | Gat | Aat | 1 | 1 | A.2.4 | 0.003367 |
N | 348 | D348N | Gat | Aat | 1 | 1 | A.2.5 | 0.000499 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | A.3 | 0.002096 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | AD.2 | 0.000219 |
N | 348 | D348H | Gat | Cat | 1 | 1 | AE.8 | 0.000489 |
N | 348 | D348K | GaT | AaA | 1 | 1 | All | 0 |
N | 348 | D348Q | GaT | CaA | 1 | 1 | All | 0 |
N | 348 | D348P | GAt | CCt | 1 | 1 | All | 0 |
N | 348 | D348N | Gat | Aat | 1 | 1 | AT.1 | 0.005128 |
N | 348 | D348H | Gat | Cat | 1 | 1 | AU.2 | 0.002421 |
N | 348 | D348H | Gat | Cat | 1 | 1 | AY.10 | 0.00053 |
N | 348 | D348N | Gat | Aat | 1 | 1 | AY.10 | 0.00053 |
N | 348 | D348H | Gat | Cat | 1 | 1 | AY.100 | 0.000046 |
N | 348 | D348G | gAt | gGt | 1 | 1 | AY.102 | 0.000027 |
N | 348 | D348del | GAT | --- | 1 | 1 | AY.103 | 0.000006 |
N | 348 | D348H | Gat | Cat | 1 | 1 | AY.104 | 0.001984 |
N | 348 | D348N | Gat | Aat | 1 | 1 | AY.105 | 0.000643 |
N | 348 | D348H | Gat | Cat | 1 | 1 | AY.110 | 0.000113 |
N | 348 | D348D | gaT | gaC | 1 | 1 | AY.116 | 0.000287 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | AY.116 | 0.000287 |
N | 348 | D348S | GAt | AGt | 1 | 1 | AY.117 | 0.000085 |
N | 348 | D348D | gaT | gaC | 1 | 1 | AY.117 | 0.000085 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | AY.118 | 0.000063 |
N | 348 | D348G | gAt | gGt | 1 | 1 | AY.118 | 0.000063 |
N | 348 | D348D | gaT | gaC | 1 | 1 | AY.120 | 0.000037 |
N | 348 | D348H | Gat | Cat | 1 | 1 | AY.121 | 0.000135 |
N | 348 | D348G | gAt | gGt | 1 | 1 | AY.121 | 0.000135 |
N | 348 | D348H | Gat | Cat | 1 | 1 | AY.13 | 0.000161 |
N | 348 | D348D | gaT | gaC | 1 | 1 | AY.14 | 0.000088 |
N | 348 | D348D | gaT | gaC | 1 | 1 | AY.16 | 0.00038 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | AY.16 | 0.00038 |
N | 348 | D348V | gAt | gTt | 1 | 1 | AY.16 | 0.00038 |
N | 348 | D348H | Gat | Cat | 1 | 1 | AY.18 | 0.010101 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | AY.19 | 0.00114 |
N | 348 | D348N | Gat | Aat | 1 | 1 | AY.23 | 0.00007 |
N | 348 | D348V | gAt | gTt | 1 | 1 | AY.25 | 0.000006 |
N | 348 | D348D | gaT | gaC | 1 | 1 | AY.27 | 0.000065 |
N | 348 | D348G | gAt | gGt | 1 | 1 | AY.27 | 0.000065 |
N | 348 | D348H | Gat | Cat | 1 | 1 | AY.27 | 0.000065 |
N | 348 | D348H | Gat | Cat | 1 | 1 | AY.29 | 0.000016 |
N | 348 | D348N | Gat | Aat | 1 | 1 | AY.3 | 0.00001 |
N | 348 | D348G | gAt | gGt | 1 | 1 | AY.3.1 | 0.000085 |
N | 348 | D348H | Gat | Cat | 1 | 1 | AY.3.1 | 0.000085 |
N | 348 | D348N | Gat | Aat | 1 | 1 | AY.3.1 | 0.000085 |
N | 348 | D348D | gaT | gaC | 1 | 1 | AY.30 | 0.000396 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | AY.30 | 0.000396 |
N | 348 | D348D | gaT | gaC | 1 | 1 | AY.32 | 0.000532 |
N | 348 | D348H | Gat | Cat | 1 | 1 | AY.34 | 0.000097 |
N | 348 | D348D | gaT | gaC | 1 | 1 | AY.34.1 | 0.00051 |
N | 348 | D348H | Gat | Cat | 1 | 1 | AY.36 | 0.000148 |
N | 348 | D348V | gAt | gTt | 1 | 1 | AY.37 | 0.000316 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | AY.37 | 0.000316 |
N | 348 | D348E | gaT | gaG | 1 | 1 | AY.39 | 0.000025 |
N | 348 | D348A | gAt | gCt | 1 | 1 | AY.4 | 0.000002 |
N | 348 | D348S | GAt | AGt | 1 | 1 | AY.4 | 0.000002 |
N | 348 | D348E | gaT | gaG | 1 | 1 | AY.4 | 0.000002 |
N | 348 | D348G | gAt | gGt | 1 | 1 | AY.4.2 | 0.000022 |
N | 348 | D348del2 | gAT | g-- | 1 | 1 | AY.4.2.1 | 0.000149 |
N | 348 | D348H | Gat | Cat | 1 | 1 | AY.4.4 | 0.000409 |
N | 348 | D348A | gAt | gCt | 1 | 1 | AY.42 | 0.00004 |
N | 348 | D348G | gAt | gGt | 1 | 1 | AY.43 | 0.000004 |
N | 348 | D348E | gaT | gaG | 1 | 1 | AY.44 | 0.000006 |
N | 348 | D348A | gAt | gCt | 1 | 1 | AY.44 | 0.000006 |
N | 348 | D348V | gAt | gTt | 1 | 1 | AY.44 | 0.000006 |
N | 348 | D348E | gaT | gaG | 1 | 1 | AY.45 | 0.000122 |
N | 348 | D348N | Gat | Aat | 1 | 1 | AY.45 | 0.000122 |
N | 348 | D348H | Gat | Cat | 1 | 1 | AY.45 | 0.000122 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | AY.46.4 | 0.000165 |
N | 348 | D348V | gAt | gTt | 1 | 1 | AY.46.4 | 0.000165 |
N | 348 | D348G | gAt | gGt | 1 | 1 | AY.46.4 | 0.000165 |
N | 348 | D348D | gaT | gaC | 1 | 1 | AY.46.6 | 0.000072 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | AY.46.6 | 0.000072 |
N | 348 | D348N | Gat | Aat | 1 | 1 | AY.47 | 0.000031 |
N | 348 | D348N | Gat | Aat | 1 | 1 | AY.5 | 0.000021 |
N | 348 | D348D | gaT | gaC | 1 | 1 | AY.54 | 0.000095 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | AY.55 | 0.000917 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | AY.6 | 0.000041 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | AY.61 | 0.000105 |
N | 348 | D348A | gAt | gCt | 1 | 1 | AY.61 | 0.000105 |
N | 348 | D348E | gaT | gaG | 1 | 1 | AY.61 | 0.000105 |
N | 348 | D348D | gaT | gaC | 1 | 1 | AY.65 | 0.000533 |
N | 348 | D348del | GAT | --- | 1 | 1 | AY.67 | 0.000464 |
N | 348 | D348H | Gat | Cat | 1 | 1 | AY.68 | 0.000274 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | AY.68 | 0.000274 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | AY.69 | 0.000187 |
N | 348 | D348H | Gat | Cat | 1 | 1 | AY.7.2 | 0.000559 |
N | 348 | D348H | Gat | Cat | 1 | 1 | AY.70 | 0.000209 |
N | 348 | D348H | Gat | Cat | 1 | 1 | AY.74 | 0.000116 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | AY.75.1 | 0.00018 |
N | 348 | D348D | gaT | gaC | 1 | 1 | AY.79 | 0.001211 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | AY.83 | 0.001724 |
N | 348 | D348G | gAt | gGt | 1 | 1 | AY.84 | 0.000437 |
N | 348 | D348D | gaT | gaC | 1 | 1 | AY.87 | 0.000833 |
N | 348 | D348H | Gat | Cat | 1 | 1 | AY.87 | 0.000833 |
N | 348 | D348H | Gat | Cat | 1 | 1 | AY.88 | 0.000884 |
N | 348 | D348V | gAt | gTt | 1 | 1 | AY.9 | 0.000068 |
N | 348 | D348H | Gat | Cat | 1 | 1 | AY.9 | 0.000068 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | AY.9.2 | 0.000037 |
N | 348 | D348E | gaT | gaA | 1 | 1 | AY.9.2 | 0.000037 |
N | 348 | D348D | gaT | gaC | 1 | 1 | AY.90 | 0.000684 |
N | 348 | D348H | Gat | Cat | 1 | 1 | AY.92 | 0.000287 |
N | 348 | D348D | gaT | gaC | 1 | 1 | AY.92 | 0.000287 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | AY.92 | 0.000287 |
N | 348 | D348H | Gat | Cat | 1 | 1 | AY.93 | 0.000273 |
N | 348 | D348Y | GaT | TaC | 1 | 1 | AY.94 | 0.000443 |
N | 348 | D348A | gAt | gCt | 1 | 1 | AY.94 | 0.000443 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | AY.95 | 0.000761 |
N | 348 | D348G | gAt | gGt | 1 | 1 | AY.98 | 0.000079 |
N | 348 | D348D | gaT | gaC | 1 | 1 | AY.98.1 | 0.000048 |
N | 348 | D348H | Gat | Cat | 1 | 1 | AY.99 | 0.001049 |
N | 348 | D348D | gaT | gaC | 1 | 1 | AY.99 | 0.001049 |
N | 348 | D348del2 | GAt | --t | 1 | 1 | AY.99 | 0.001049 |
N | 348 | D348H | Gat | Cat | 1 | 1 | AZ.3 | 0.00152 |
N | 348 | D348H | Gat | Cat | 1 | 1 | B | 0.000128 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B | 0.000128 |
N | 348 | D348del | GAT | --- | 1 | 1 | B.1 | 0.000009 |
N | 348 | D348E | gaT | gaA | 1 | 1 | B.1 | 0.000009 |
N | 348 | D348A | gAt | gCt | 1 | 1 | B.1 | 0.000009 |
N | 348 | D348del | GAT | --- | 1 | 1 | B.1.1 | 0.000018 |
N | 348 | D348N | Gat | Aat | 1 | 1 | B.1.1 | 0.000018 |
N | 348 | D348P | GAt | CCt | 1 | 1 | B.1.1 | 0.000018 |
N | 348 | D348D | gaT | gaC | 1 | 1 | B.1.1.10 | 0.001115 |
N | 348 | D348del | GAT | --- | 1 | 1 | B.1.1.139 | 0.022727 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.1.141 | 0.002012 |
N | 348 | D348H | Gat | Cat | 1 | 1 | B.1.1.153 | 0.001095 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.1.157 | 0.000913 |
N | 348 | D348D | gaT | gaC | 1 | 1 | B.1.1.186 | 0.003436 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.1.187 | 0.00885 |
N | 348 | D348D | gaT | gaC | 1 | 1 | B.1.1.198 | 0.001468 |
N | 348 | D348E | gaT | gaG | 1 | 1 | B.1.1.207 | 0.001182 |
N | 348 | D348D | gaT | gaC | 1 | 1 | B.1.1.214 | 0.000055 |
N | 348 | D348N | Gat | Aat | 1 | 1 | B.1.1.214 | 0.000055 |
N | 348 | D348E | gaT | gaG | 1 | 1 | B.1.1.216 | 0.00089 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.1.216 | 0.00089 |
N | 348 | D348D | gaT | gaC | 1 | 1 | B.1.1.25 | 0.000569 |
N | 348 | D348H | GaT | CaC | 1 | 1 | B.1.1.27 | 0.00565 |
N | 348 | D348D | gaT | gaC | 1 | 1 | B.1.1.279 | 0.001121 |
N | 348 | D348H | Gat | Cat | 1 | 1 | B.1.1.28 | 0.000311 |
N | 348 | D348D | gaT | gaC | 1 | 1 | B.1.1.284 | 0.000107 |
N | 348 | D348D | gaT | gaC | 1 | 1 | B.1.1.306 | 0.000438 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.1.316 | 0.000925 |
N | 348 | D348H | Gat | Cat | 1 | 1 | B.1.1.326 | 0.001761 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.1.348 | 0.000796 |
N | 348 | D348H | Gat | Cat | 1 | 1 | B.1.1.369 | 0.000446 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.1.37 | 0.000193 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.1.371 | 0.010417 |
N | 348 | D348H | Gat | Cat | 1 | 1 | B.1.1.389 | 0.006061 |
N | 348 | D348N | Gat | Aat | 1 | 1 | B.1.1.391 | 0.008547 |
N | 348 | D348H | Gat | Cat | 1 | 1 | B.1.1.40 | 0.034483 |
N | 348 | D348G | gAt | gGt | 1 | 1 | B.1.1.416 | 0.000905 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.1.419 | 0.007407 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.1.50 | 0.000679 |
N | 348 | D348D | gaT | gaC | 1 | 1 | B.1.1.519 | 0.00004 |
N | 348 | D348del | GAT | --- | 1 | 1 | B.1.1.519 | 0.00004 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.1.63 | 0.000386 |
N | 348 | D348del2 | GAt | --t | 1 | 1 | B.1.1.7 | 0.000001 |
N | 348 | D348del | GAT | --- | 1 | 1 | B.1.1.7 | 0.000001 |
N | 348 | D348D | gaT | gaC | 1 | 1 | B.1.1.89 | 0.006061 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.1.89 | 0.006061 |
N | 348 | D348A | gAt | gCt | 1 | 1 | B.1.105 | 0.009615 |
N | 348 | D348V | gAt | gTt | 1 | 1 | B.1.120 | 0.007692 |
N | 348 | D348H | Gat | Cat | 1 | 1 | B.1.160 | 0.000031 |
N | 348 | D348D | gaT | gaC | 1 | 1 | B.1.160 | 0.000031 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.160.14 | 0.002119 |
N | 348 | D348V | gAt | gTt | 1 | 1 | B.1.160.16 | 0.000929 |
N | 348 | D348H | Gat | Cat | 1 | 1 | B.1.160.23 | 0.004831 |
N | 348 | D348H | Gat | Cat | 1 | 1 | B.1.166 | 0.008475 |
N | 348 | D348N | Gat | Aat | 1 | 1 | B.1.177 | 0.000013 |
N | 348 | D348H | Gat | Cat | 1 | 1 | B.1.177.12 | 0.000152 |
N | 348 | D348G | gAt | gGt | 1 | 1 | B.1.177.4 | 0.000211 |
N | 348 | D348N | Gat | Aat | 1 | 1 | B.1.177.42 | 0.000894 |
N | 348 | D348del | GAT | --- | 1 | 1 | B.1.177.45 | 0.000381 |
N | 348 | D348D | gaT | gaC | 1 | 1 | B.1.177.50 | 0.004695 |
N | 348 | D348Q | GaT | CaA | 1 | 1 | B.1.177.63 | 0.002703 |
N | 348 | D348D | gaT | gaC | 1 | 1 | B.1.177.69 | 0.001484 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.177.73 | 0.000566 |
N | 348 | D348N | Gat | Aat | 1 | 1 | B.1.177.81 | 0.000189 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.177.82 | 0.000477 |
N | 348 | D348H | Gat | Cat | 1 | 1 | B.1.177.82 | 0.000477 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.177.84 | 0.006667 |
N | 348 | D348G | gAt | gGt | 1 | 1 | B.1.177.86 | 0.000183 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.177.86 | 0.000183 |
N | 348 | D348H | Gat | Cat | 1 | 1 | B.1.177.87 | 0.000728 |
N | 348 | D348D | gaT | gaC | 1 | 1 | B.1.179 | 0.003759 |
N | 348 | D348N | Gat | Aat | 1 | 1 | B.1.2 | 0.000009 |
N | 348 | D348D | gaT | gaC | 1 | 1 | B.1.201 | 0.005682 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.215 | 0.009615 |
N | 348 | D348H | Gat | Cat | 1 | 1 | B.1.234 | 0.000132 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.235 | 0.002519 |
N | 348 | D348H | Gat | Cat | 1 | 1 | B.1.239 | 0.001221 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.240 | 0.000216 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.241 | 0.000812 |
N | 348 | D348H | Gat | Cat | 1 | 1 | B.1.258 | 0.000067 |
N | 348 | D348D | gaT | gaC | 1 | 1 | B.1.258 | 0.000067 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.258.14 | 0.00098 |
N | 348 | D348D | gaT | gaC | 1 | 1 | B.1.258.17 | 0.000104 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.258.4 | 0.003448 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.320 | 0.001245 |
N | 348 | D348D | gaT | gaC | 1 | 1 | B.1.351.3 | 0.000876 |
N | 348 | D348H | Gat | Cat | 1 | 1 | B.1.351.5 | 0.0006 |
N | 348 | D348H | Gat | Cat | 1 | 1 | B.1.36 | 0.000146 |
N | 348 | D348H | Gat | Cat | 1 | 1 | B.1.36.10 | 0.004785 |
N | 348 | D348H | Gat | Cat | 1 | 1 | B.1.36.18 | 0.00042 |
N | 348 | D348D | gaT | gaC | 1 | 1 | B.1.36.26 | 0.002857 |
N | 348 | D348D | gaT | gaC | 1 | 1 | B.1.36.27 | 0.000763 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.36.29 | 0.000517 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.36.8 | 0.001 |
N | 348 | D348H | Gat | Cat | 1 | 1 | B.1.361 | 0.001289 |
N | 348 | D348del | GAT | --- | 1 | 1 | B.1.362 | 0.001541 |
N | 348 | D348H | Gat | Cat | 1 | 1 | B.1.362 | 0.001541 |
N | 348 | D348D | gaT | gaC | 1 | 1 | B.1.363 | 0.012987 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.367 | 0.000792 |
N | 348 | D348H | Gat | Cat | 1 | 1 | B.1.389 | 0.001002 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.391 | 0.001127 |
N | 348 | D348del | GAT | --- | 1 | 1 | B.1.400 | 0.000429 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.400 | 0.000429 |
N | 348 | D348H | Gat | Cat | 1 | 1 | B.1.402 | 0.009804 |
N | 348 | D348del | GAT | --- | 1 | 1 | B.1.415 | 0.014286 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.415.1 | 0.007576 |
N | 348 | D348D | gaT | gaC | 1 | 1 | B.1.427 | 0.00005 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.428 | 0.00102 |
N | 348 | D348H | Gat | Cat | 1 | 1 | B.1.428.2 | 0.033333 |
N | 348 | D348G | gAt | gGt | 1 | 1 | B.1.429 | 0.000024 |
N | 348 | D348D | gaT | gaC | 1 | 1 | B.1.429 | 0.000024 |
N | 348 | D348del | GAT | --- | 1 | 1 | B.1.434 | 0.052632 |
N | 348 | D348N | Gat | Aat | 1 | 1 | B.1.462 | 0.007246 |
N | 348 | D348H | Gat | Cat | 1 | 1 | B.1.462 | 0.007246 |
N | 348 | D348H | Gat | Cat | 1 | 1 | B.1.474 | 0.001901 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.497 | 0.000315 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.517 | 0.000427 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.523 | 0.002451 |
N | 348 | D348H | Gat | Cat | 1 | 1 | B.1.524 | 0.001406 |
N | 348 | D348D | gaT | gaC | 1 | 1 | B.1.525 | 0.000113 |
N | 348 | D348V | gAt | gTt | 1 | 1 | B.1.526 | 0.000024 |
N | 348 | D348N | Gat | Aat | 1 | 1 | B.1.526 | 0.000024 |
N | 348 | D348D | gaT | gaC | 1 | 1 | B.1.526 | 0.000024 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.541 | 0.004425 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.551 | 0.00129 |
N | 348 | D348H | Gat | Cat | 1 | 1 | B.1.560 | 0.00463 |
N | 348 | D348H | Gat | Cat | 1 | 1 | B.1.561 | 0.000397 |
N | 348 | D348D | gaT | gaC | 1 | 1 | B.1.564 | 0.000426 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.567 | 0.003333 |
N | 348 | D348D | gaT | gaC | 1 | 1 | B.1.567 | 0.003333 |
N | 348 | D348D | gaT | gaC | 1 | 1 | B.1.571 | 0.009709 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.577 | 0.000687 |
N | 348 | D348H | Gat | Cat | 1 | 1 | B.1.582 | 0.000491 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.582 | 0.000491 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.587 | 0.001898 |
N | 348 | D348D | gaT | gaC | 1 | 1 | B.1.595 | 0.000261 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.595 | 0.000261 |
N | 348 | D348N | Gat | Aat | 1 | 1 | B.1.596.1 | 0.009346 |
N | 348 | D348D | gaT | gaC | 1 | 1 | B.1.609 | 0.000479 |
N | 348 | D348H | Gat | Cat | 1 | 1 | B.1.617.1 | 0.000129 |
N | 348 | D348D | gaT | gaC | 1 | 1 | B.1.617.1 | 0.000129 |
N | 348 | D348del | GAT | --- | 1 | 1 | B.1.617.2 | 0.000004 |
N | 348 | D348H | Gat | Cat | 1 | 1 | B.1.620 | 0.000946 |
N | 348 | D348N | Gat | Aat | 1 | 1 | B.1.621 | 0.000089 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.628 | 0.000352 |
N | 348 | D348del | GAT | --- | 1 | 1 | B.1.630 | 0.005236 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.1.635 | 0.017544 |
N | 348 | D348V | gAt | gTt | 1 | 1 | B.1.637 | 0.000073 |
N | 348 | D348D | gaT | gaC | 1 | 1 | B.1.78 | 0.008547 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.15 | 0.017544 |
N | 348 | D348D | gaT | gaC | 1 | 1 | B.23 | 0.002924 |
N | 348 | D348D | gaT | gaC | 1 | 1 | B.29 | 0.003509 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.40 | 0.000364 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | B.45 | 0.003831 |
N | 348 | D348V | gAt | gTt | 1 | 1 | C.36 | 0.000911 |
N | 348 | D348H | Gat | Cat | 1 | 1 | C.36 | 0.000911 |
N | 348 | D348H | Gat | Cat | 1 | 1 | C.36.3 | 0.000567 |
N | 348 | D348H | Gat | Cat | 1 | 1 | C.37 | 0.000116 |
N | 348 | D348E | gaT | gaG | 1 | 1 | N.3 | 0.005814 |
N | 348 | D348H | Gat | Cat | 1 | 1 | N.4 | 0.004255 |
N | 348 | D348V | gAt | gTt | 1 | 1 | P.1 | 0.000016 |
N | 348 | D348D | gaT | gaC | 1 | 1 | P.1.1 | 0.000318 |
N | 348 | D348H | Gat | Cat | 1 | 1 | P.1.1 | 0.000318 |
N | 348 | D348H | Gat | Cat | 1 | 1 | P.1.13 | 0.000898 |
N | 348 | D348G | gAt | gGt | 1 | 1 | P.1.14 | 0.000048 |
N | 348 | D348D | gaT | gaC | 1 | 1 | P.1.15 | 0.000232 |
N | 348 | D348H | Gat | Cat | 1 | 1 | P.1.16 | 0.000374 |
N | 348 | D348H | Gat | Cat | 1 | 1 | P.1.7 | 0.000319 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | P.1.7 | 0.000319 |
N | 348 | D348H | Gat | Cat | 1 | 1 | P.3 | 0.001595 |
N | 348 | D348D | gaT | gaC | 1 | 1 | Q.1 | 0.000126 |
N | 348 | D348H | Gat | Cat | 1 | 1 | Q.7 | 0.001111 |
N | 348 | D348D | gaT | gaC | 1 | 1 | Q.8 | 0.000165 |
N | 348 | D348N | Gat | Aat | 1 | 1 | Q.8 | 0.000165 |
N | 348 | D348Y | Gat | Tat | 1 | 1 | R.1 | 0.00009 |
N | 348 | D348G | gAt | gGt | 1 | 1 | W.1 | 0.008696 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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