CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : CodonNum = 339 & Codon = ttT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N339L339FnonsynttGttT3753580.95466729288-29290

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N339L339FttGttT358375All0.000068
N339L339FttGttT4647AY.40.000072
N339L339FttGttT4242AY.140.003697
N339L339FttGttT4041B.1.1.70.000036
N339L339FttGttT2222AY.390.000544
N339L339FttGttT2020AY.440.000122
N339L339FttGttT1616AY.120.10.005136
N339L339FttGttT1313B.1.2340.001715
N339L339FttGttT1212AY.1200.000446
N339L339FttGttT612AY.290.000095
N339L339FttGttT1010B.1.3510.000297
N339L339FttGttT99AY.430.00004
N339L339FttGttT99B.1.10.000163
N339L339FttGttT99B.1.617.20.000034
N339L339FttGttT78AY.1030.000043
N339L339FttGttT77AY.50.000145
N339L339FttGttT77B.1.1.280.002179
N339L339FttGttT77B.1.9.50.039773
N339L339FttGttT56AY.250.00003
N339L339FttGttT55AY.270.000324
N339L339FttGttT55B.1.20.000044
N339L339FttGttT55B.1.351.50.002998
N339L339FttGttT44B.10.000037
N339L339FttGttT34B.1.1770.00004
N339L339FttGttT33B.1.1.2220.000612
N339L339FttGttT22AY.1020.000053
N339L339FttGttT22AY.1190.000071
N339L339FttGttT22AY.380.000999
N339L339FttGttT22B.1.160.250.022222
N339L339FttGttT22B.1.6230.001073
N339L339FttGttT11AY.1000.000046
N339L339FttGttT11AY.1170.000085
N339L339FttGttT11AY.190.00114
N339L339FttGttT11AY.200.000039
N339L339FttGttT11AY.230.00007
N339L339FttGttT11AY.30.00001
N339L339FttGttT11AY.39.10.00004
N339L339FttGttT11AY.4.20.000022
N339L339FttGttT11AY.4.2.10.000149
N339L339FttGttT11AY.420.00004
N339L339FttGttT11AY.46.20.000635
N339L339FttGttT11AY.60.000041
N339L339FttGttT11AY.610.000105
N339L339FttGttT11AY.650.000533
N339L339FttGttT11AY.7.10.000113
N339L339FttGttT11AY.720.001361
N339L339FttGttT11B.1.1.2160.00089
N339L339FttGttT11B.1.1.3060.000438
N339L339FttGttT11B.1.1700.00431
N339L339FttGttT11B.1.177.810.000189
N339L339FttGttT11B.1.2580.000067
N339L339FttGttT11B.1.3460.001311
N339L339FttGttT11B.1.3490.000715
N339L339FttGttT11B.1.36.290.000517
N339L339FttGttT11B.1.4270.00005
N339L339FttGttT11B.1.4700.001404
N339L339FttGttT11B.1.5260.000024
N339L339FttGttT11B.1.575.10.002439
N339L339FttGttT11B.1.5950.000261
N339L339FttGttT11B.1.6120.002653
N339L339FttGttT11B.1.6210.000089
N339L339FttGttT11C.370.000116
N339L339FttGttT11C.40.01
N339L339FttGttT11D.20.000075
N339L339FttGttT11K.30.006173
N339L339FttGttT11L.30.003546