CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : CodonNum = 314

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N314F314FsynttCttT14791479129213-29215
N314F314LnonsynttCttA75630.8429213-29215
N314F314LnonsynTtcCtc7580.10666729213-29215
N314F314LnonsynttCttG7540.053333329213-29215
N314F314deldelTTC---3636129213-29215
N314F314SnonsyntTctCc66129213-29215
N314F314del1delttCtt-44129213-29215
N314F314VnonsynTtcGtc44129213-29215
N314F314CnonsyntTctGc22129213-29215
N314F314InonsynTtcAtc22129213-29215
N314F314YnonsyntTctAc22129213-29215
N314F314WnonsyntTCtGG11129213-29215
N314F314XnonsyntTCtAA11129213-29215

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N314F314FttCttT14791479All0.000283
N314F314FttCttT307307B.1.1.70.000275
N314F314FttCttT219219B.1.617.20.000825
N314F314FttCttT203203AE.80.099267
N314F314FttCttT8686B.1.177.670.656489
N314F314LttCttA6375All0.000012
N314F314LTtcCtc875All0.000002
N314F314LttCttG475All0.000001
N314F314FttCttT6565B.1.4710.177596
N314F314FttCttT5454AY.920.015513
N314F314FttCttT5050AY.130.008049
N314F314FttCttT4545AY.220.094142
N314F314FttCttT4040P.10.00063
N314F314FttCttT3737AY.250.000223
N314F314FttCttT3737B.1.20.000326
N314F314delTTC---3636All0.000007
N314F314FttCttT3636AY.980.002844
N314F314FttCttT3333B.1.1.4211
N314F314LttCttA2525AY.40.000039
N314F314FttCttT2121B.1.5260.000494
N314F314FttCttT1818AY.40.000028
N314F314LttCttA1818AY.4.50.001935
N314F314FttCttT1717AY.430.000075
N314F314FttCttT1414B.1.36.180.005882
N314F314FttCttT1212B.10.00011
N314F314FttCttT1111AY.390.000272
N314F314FttCttT1111AY.440.000067
N314F314FttCttT1010AY.230.000697
N314F314FttCttT99AY.16.10.004229
N314F314FttCttT88P.1.140.000382
N314F314FttCttT77B.1.3960.00494
N314F314StTctCc66All0.000001
N314F314FttCttT66AY.480.002791
N314F314FttCttT66AY.98.10.000291
N314F314FttCttT66B.1.10.000109
N314F314LttCttA55AY.90.000338
N314F314delTTC---55B.1.1.70.000004
N314F314FttCttT55B.1.1770.000066
N314F314FttCttT55P.1.10.001588
N314F314FttCttT55Q.80.000825
N314F314VTtcGtc44All0.000001
N314F314del1ttCtt-44All0.000001
N314F314FttCttT44AY.1190.000141
N314F314LttCttA44AY.80.002424
N314F314FttCttT44B.1.1.630.001543
N314F314delTTC---44B.1.1770.000053
N314F314FttCttT44B.1.5880.00364
N314F314FttCttT44P.1.150.000929
N314F314FttCttT33AY.1020.00008
N314F314FttCttT33AY.1130.000427
N314F314FttCttT33AY.680.000821
N314F314LttCttA23B.10.000018
N314F314LTtcCtc13B.10.000009
N314F314delTTC---33B.1.10.000054
N314F314delTTC---33B.1.617.20.000011
N314F314FttCttT33B.1.6210.000266
N314F314LttCttG220.111111
N314F314YtTctAc220.111111
N314F314YtTctAc22All0
N314F314ITtcAtc22All0
N314F314CtTctGc22All0
N314F314FttCttT22AY.1030.000012
N314F314FttCttT22AY.1080.002205
N314F314FttCttT22AY.260.000057
N314F314FttCttT22AY.290.000032
N314F314FttCttT22AY.30.00002
N314F314FttCttT22AY.4.20.000043
N314F314FttCttT22AY.750.000112
N314F314FttCttT22AY.870.001665
N314F314StTctCc22B.10.000018
N314F314VTtcGtc22B.10.000018
N314F314LttCttA22B.1.10.000036
N314F314LttCttA12B.1.1.70.000001
N314F314LTtcCtc12B.1.1.70.000001
N314F314LTtcCtc22B.1.1770.000026
N314F314FttCttT22B.1.177.600.000437
N314F314FttCttT22B.1.177.810.000379
N314F314FttCttT22B.1.177.860.000367
N314F314FttCttT22B.1.2580.000133
N314F314FttCttT22B.1.360.000292
N314F314FttCttT22B.1.36.290.001035
N314F314FttCttT22B.1.4220.001625
N314F314FttCttT22B.1.5960.000174
N314F314FttCttT22P.20.000373
N314F314VTtcGtc110.055556
N314F314WtTCtGG11All0
N314F314XtTCtAA11All0
N314F314FttCttT11AY.1000.000046
N314F314delTTC---11AY.1020.000027
N314F314FttCttT11AY.120.000316
N314F314FttCttT11AY.1200.000037
N314F314LttCttA11AY.1200.000037
N314F314LttCttA11AY.170.008197
N314F314FttCttT11AY.190.00114
N314F314delTTC---11AY.200.000039
N314F314FttCttT11AY.200.000039
N314F314VTtcGtc11AY.230.00007
N314F314StTctCc11AY.250.000006
N314F314delTTC---11AY.250.000006
N314F314FttCttT11AY.330.000067
N314F314delTTC---11AY.340.000097
N314F314LTtcCtc11AY.360.000148
N314F314FttCttT11AY.360.000148
N314F314delTTC---11AY.40.000002
N314F314FttCttT11AY.4.40.000409
N314F314FttCttT11AY.420.00004
N314F314delTTC---11AY.430.000004
N314F314FttCttT11AY.470.000031
N314F314delTTC---11AY.50.000021
N314F314FttCttT11AY.50.000021
N314F314FttCttT11AY.530.000288
N314F314FttCttT11AY.550.000917
N314F314ITtcAtc11AY.570.000656
N314F314LttCttA11AY.580.000907
N314F314del1ttCtt-11AY.610.000105
N314F314delTTC---11AY.670.000464
N314F314FttCttT11AY.690.000187
N314F314delTTC---11AY.750.000056
N314F314FttCttT11AY.770.001127
N314F314delTTC---11AY.780.001541
N314F314FttCttT11AY.860.00083
N314F314LttCttA11AY.870.000833
N314F314del1ttCtt-11B0.000128
N314F314delTTC---11B.10.000009
N314F314FttCttT11B.1.1.1210.002427
N314F314LttCttG11B.1.1.1390.022727
N314F314FttCttT11B.1.1.1610.003534
N314F314FttCttT11B.1.1.2140.000055
N314F314FttCttT11B.1.1.2220.000204
N314F314FttCttT11B.1.1.2650.003155
N314F314LttCttG11B.1.1.270.00565
N314F314FttCttT11B.1.1.2790.001121
N314F314delTTC---11B.1.1.2790.001121
N314F314CtTctGc11B.1.1.3180.000302
N314F314FttCttT11B.1.1.5190.00004
N314F314del1ttCtt-11B.1.1.70.000001
N314F314FttCttT11B.1.1600.000031
N314F314LTtcCtc11B.1.177.310.011494
N314F314XtTCtAA11B.1.177.630.002703
N314F314delTTC---11B.1.177.830.001481
N314F314LTtcCtc11B.1.20.000009
N314F314delTTC---11B.1.20.000009
N314F314StTctCc11B.1.2210.000071
N314F314FttCttT11B.1.2210.000071
N314F314FttCttT11B.1.2320.000537
N314F314FttCttT11B.1.2410.000812
N314F314delTTC---11B.1.2580.000067
N314F314delTTC---11B.1.258.160.001637
N314F314FttCttT11B.1.2600.003344
N314F314FttCttT11B.1.3190.003049
N314F314FttCttT11B.1.36.20.010753
N314F314WtTCtGG11B.1.36.290.000517
N314F314FttCttT11B.1.3690.000285
N314F314delTTC---11B.1.4270.00005
N314F314FttCttT11B.1.4290.000024
N314F314LTtcCtc11B.1.466.20.000391
N314F314CtTctGc11B.1.466.20.000391
N314F314LttCttA11B.1.5990.00365
N314F314delTTC---11B.1.6100.003546
N314F314StTctCc11B.1.6120.002653
N314F314delTTC---11B.1.617.10.000129
N314F314LttCttA11B.1.617.20.000004
N314F314delTTC---11B.1.617.30.002985
N314F314del1ttCtt-11B.1.6280.000352
N314F314delTTC---11B.1.6300.005236
N314F314ITtcAtc11B.60.00091
N314F314StTctCc11D.20.000075
N314F314FttCttT11D.20.000075
N314F314FttCttT11P.1.120.000484