CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : CodonNum = 292

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N292I292IsynatCatT656065130.99283529147-29149
N292I292IsynatCatA6560470.0071646329147-29149
N292I292TnonsynaTcaCc467545200.96684529147-29149
N292I292TnonsynaTCaCT46751550.033155129147-29149
N292I292VnonsynAtcGtc232232129147-29149
N292I292NnonsynaTcaAc9999129147-29149
N292I292LnonsynAtcCtc4646129147-29149
N292I292deldelATC---1212129147-29149
N292I292MnonsynatCatG66129147-29149
N292I292SnonsynaTcaGc55129147-29149
N292I292FnonsynAtcTtc22129147-29149
N292I292del1delaTca-c11129147-29149
N292I292del2delATC--N11129147-29149
N292I292PnonsynATCCCA11129147-29149

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N292I292IatCatT65136560All0.001246
N292I292IatCatA476560All0.000009
N292I292TaTcaCc45204675All0.000865
N292I292TaTCaCT1554675All0.00003
N292I292TaTcaCc23532363B.1.1.330.99032
N292I292TaTCaCT102363B.1.1.330.004209
N292I292IatCatT20392040B.1.1.70.001825
N292I292IatCatA12040B.1.1.70.000001
N292I292TaTcaCc395538N.50.69788
N292I292TaTCaCT143538N.50.25265
N292I292IatCatT468470AY.40.000728
N292I292IatCatA2470AY.40.000003
N292I292IatCatT439439P.10.006916
N292I292IatCatT351351B.1.177.350.242571
N292I292TaTcaCc234235N.40.995745
N292I292TaTCaCT1235N.40.004255
N292I292VAtcGtc232232All0.000044
N292I292TaTcaCc229229B.1.10.004154
N292I292IatCatT226226B.1.1.2940.286076
N292I292IatCatT217217B.1.1.4291
N292I292IatCatT193193B.1.10.003501
N292I292TaTcaCc172172N.31
N292I292TaTcaCc164164N.90.97619
N292I292IatCatT148153B.10.001356
N292I292IatCatA5153B.10.000046
N292I292IatCatT148151B.1.617.20.000557
N292I292IatCatA3151B.1.617.20.000011
N292I292TaTcaCc140140N.60.992908
N292I292IatCatT132132B.1.1.2360.910345
N292I292TaTcaCc127127B.1.1.70.000114
N292I292IatCatT100101AY.390.002471
N292I292IatCatA1101AY.390.000025
N292I292NaTcaAc9999All0.000019
N292I292TaTcaCc9696B.1.160.160.089219
N292I292IatCatT9191B.1.20.000801
N292I292IatCatT8385AY.440.000505
N292I292IatCatA285AY.440.000012
N292I292TaTcaCc8384B.10.00076
N292I292TaTCaCT184B.10.000009
N292I292IatCatT8282AY.250.000493
N292I292IatCatT8282B.1.1260.104592
N292I292IatCatT8080B.1.3510.002378
N292I292IatCatT7677AY.30.000756
N292I292IatCatA177AY.30.00001
N292I292IatCatT7171AY.1030.000441
N292I292IatCatT6868B.1.2400.014658
N292I292IatCatT6363B.1.1.4320.079747
N292I292IatCatT5858B.1.1.5190.002303
N292I292IatCatT5353B.1.1770.000698
N292I292IatCatT5252B.1.4290.001224
N292I292IatCatT4950AY.260.001387
N292I292IatCatA150AY.260.000028
N292I292IatCatT5050AY.430.000222
N292I292LAtcCtc4646All0.000009
N292I292VAtcGtc4545AY.430.000199
N292I292IatCatT4343B.1.1.280.013383
N292I292IatCatT4343M.11
N292I292TaTcaCc4242N.10.711864
N292I292IatCatT4141B.1.1600.001279
N292I292VAtcGtc3939P.10.000614
N292I292IatCatT3535R.10.00315
N292I292TaTcaCc3434N.101
N292I292TaTcaCc3434N.71
N292I292NaTcaAc3232AY.40.00005
N292I292TaTcaCc3232N.81
N292I292TaTcaCc3131AY.250.000186
N292I292IatCatT3131C.370.003598
N292I292IatCatT2929B.1.1.1920.066975
N292I292IatCatT2929B.1.1.2140.001608
N292I292TaTcaCc2626AK.10.329114
N292I292IatCatT2626AY.3.10.002217
N292I292TaTcaCc2626AY.40.00004
N292I292IatCatT2626B.1.177.810.004922
N292I292TaTcaCc2626N.21
N292I292IatCatT2424AY.290.000379
N292I292IatCatT2222AY.1000.001012
N292I292VAtcGtc2222AY.40.000034
N292I292NaTcaAc2222AY.4.50.002365
N292I292IatCatT2121AY.1190.000741
N292I292NaTcaAc2121B.1.1770.000277
N292I292IatCatT2121B.1.3110.005766
N292I292IatCatT1421B.1.360.002043
N292I292IatCatA721B.1.360.001021
N292I292IatCatT1919AY.50.000392
N292I292TaTcaCc1919B.1.1390.01393
N292I292TaTcaCc1919B.1.177.440.00986
N292I292TaTcaCc1818AY.440.00011
N292I292TaTcaCc1717B.1.1.5190.000675
N292I292IatCatT1717B.1.5250.001924
N292I292IatCatT1616AY.1170.001352
N292I292IatCatT1616B.1.1.2820.186047
N292I292IatCatT1616B.1.1.630.006173
N292I292IatCatA1315AY.470.000404
N292I292IatCatT215AY.470.000062
N292I292IatCatT1515B.1.5090.012987
N292I292IatCatT1313AY.1020.000345
N292I292LAtcCtc1313AY.250.000078
N292I292IatCatT1313B.1.1.4340.004531
N292I292VAtcGtc1313B.1.1.70.000012
N292I292IatCatT1313B.1.5260.000306
N292I292delATC---1212All0.000002
N292I292IatCatT1212AY.4.20.00026
N292I292IatCatT1111AY.46.40.00181
N292I292VAtcGtc1111AY.46.60.000794
N292I292IatCatT1111B.1.1.2440.169231
N292I292IatCatT1111B.1.617.10.001419
N292I292VAtcGtc1111B.1.617.20.000041
N292I292IatCatT1010AY.1200.000372
N292I292VAtcGtc1010B.1.1.5190.000397
N292I292IatCatT1010B.1.177.540.006064
N292I292TaTcaCc1010B.1.20.000088
N292I292IatCatT1010B.1.2580.000665
N292I292IatCatT1010B.1.438.10.001073
N292I292TaTcaCc1010B.1.617.20.000038
N292I292TaTcaCc99AY.30.00009
N292I292IatCatT89AY.330.000534
N292I292IatCatA19AY.330.000067
N292I292VAtcGtc99B.10.000082
N292I292IatCatT99B.1.1.1330.076271
N292I292IatCatT99B.1.1.2580.029316
N292I292TaTcaCc99B.1.1600.000281
N292I292TaTcaCc99B.1.3510.000268
N292I292IatCatT99P.1.20.010405
N292I292IatCatT88AY.610.000838
N292I292IatCatT88AY.690.001493
N292I292IatCatT88B.1.1.2910.005939
N292I292IatCatT88B.1.1.700.002729
N292I292IatCatT88B.1.160.140.016949
N292I292TaTcaCc88B.1.177.750.008325
N292I292VAtcGtc88B.1.2210.000568
N292I292TaTcaCc88B.1.4290.000188
N292I292IatCatT88Q.80.001319
N292I292TaTcaCc77AY.1020.000186
N292I292LAtcCtc77AY.1200.00026
N292I292IatCatT77AY.450.000852
N292I292IatCatT67AY.750.000336
N292I292IatCatA17AY.750.000056
N292I292IatCatT77B.1.1.2160.006233
N292I292TaTcaCc77B.1.1.3930.777778
N292I292TaTcaCc77B.1.1770.000092
N292I292VAtcGtc77B.1.5950.001827
N292I292TaTcaCc77B.1.6090.003356
N292I292LAtcCtc77B.1.617.20.000026
N292I292IatCatT67B.1.6210.000531
N292I292IatCatA17B.1.6210.000089
N292I292TaTcaCc77P.10.00011
N292I292MatCatG66All0.000001
N292I292IatCatT66AY.200.000233
N292I292TaTcaCc66AY.430.000027
N292I292IatCatT66AY.460.000624
N292I292VAtcGtc66AY.690.00112
N292I292TaTcaCc66AZ.50.021053
N292I292TaTcaCc66B.1.1.280.001867
N292I292IatCatT66B.1.1.3170.00247
N292I292IatCatT66B.1.1.390.003058
N292I292IatCatT66B.1.1.4420.111111
N292I292IatCatT66B.1.4160.007614
N292I292IatCatT66B.1.4270.000303
N292I292IatCatT66P.1.140.000287
N292I292IatCatT66Q.10.000758
N292I292IatCatT55A0.001935
N292I292SaTcaGc55All0.000001
N292I292VAtcGtc55AY.1030.000031
N292I292IatCatT55AY.1140.001156
N292I292TaTcaCc55AY.340.000485
N292I292VAtcGtc55AY.470.000156
N292I292NaTcaAc55AY.90.000338
N292I292IatCatT55AY.90.000338
N292I292IatCatT55AY.9.10.000419
N292I292IatCatT55B.1.1.2220.00102
N292I292IatCatT55B.1.1.3060.002192
N292I292IatCatT55B.1.36.290.002587
N292I292IatCatT55P.1.120.00242
N292I292VAtcGtc44AY.1020.000106
N292I292MatCatG44AY.1030.000025
N292I292IatCatT44AY.1210.000541
N292I292VAtcGtc44AY.250.000024
N292I292IatCatT44AY.46.30.003735
N292I292IatCatT44AY.520.003257
N292I292IatCatT44AY.60.000165
N292I292TaTcaCc44AY.750.000224
N292I292IatCatT44AY.80.002424
N292I292NaTcaAc44AY.80.002424
N292I292IatCatT44AY.980.000316
N292I292IatCatT44AY.99.20.000369
N292I292VAtcGtc44B.1.10.000073
N292I292IatCatT44B.1.1.1890.006051
N292I292IatCatT44B.1.1.2630.006231
N292I292IatCatT44B.1.1.3510.011173
N292I292TaTcaCc44B.1.2210.000284
N292I292IatCatT44B.1.2340.000528
N292I292IatCatT44B.1.36.190.037037
N292I292IatCatT44B.1.621.10.002023
N292I292IatCatT44D.20.0003
N292I292IatCatT44P.20.000747
N292I292IatCatT33A.180.15
N292I292IatCatT33AY.1010.001471
N292I292VAtcGtc33AY.1200.000112
N292I292TaTcaCc33AY.200.000117
N292I292IatCatT23AY.230.000139
N292I292IatCatA13AY.230.00007
N292I292VAtcGtc33AY.260.000085
N292I292IatCatT33AY.270.000194
N292I292IatCatT33AY.39.10.000119
N292I292IatCatT33AY.400.002893
N292I292TaTcaCc33AY.420.000121
N292I292delATC---33AY.430.000013
N292I292VAtcGtc33AY.50.000062
N292I292IatCatT33AY.75.10.000541
N292I292IatCatT33AY.910.002191
N292I292IatCatT33B.1.1.2200.005576
N292I292IatCatT33B.1.1.2720.015625
N292I292TaTcaCc33B.1.1.3030.008287
N292I292IatCatT33B.1.1.3180.000905
N292I292IatCatT33B.1.1.3480.002389
N292I292IatCatT33B.1.1110.003525
N292I292IatCatT33B.1.177.460.002755
N292I292IatCatT33B.1.177.600.000655
N292I292IatCatT33B.1.2210.000213
N292I292IatCatA33B.1.4560.009804
N292I292IatCatT33B.1.5160.005871
N292I292IatCatT33B.1.6370.000219
N292I292IatCatT33P.1.10.000953
N292I292IatCatT33P.1.100.000808
N292I292IatCatT33P.1.150.000697
N292I292TaTcaCc220.111111
N292I292IatCatT22A.10.000564
N292I292FAtcTtc22All0
N292I292TaTcaCc22AY.1190.000071
N292I292NaTcaAc22AY.1200.000074
N292I292LAtcCtc22AY.120.20.002571
N292I292IatCatT22AY.280.003781
N292I292TaTcaCc22AY.290.000032
N292I292IatCatT22AY.320.001065
N292I292IatCatT22AY.370.000632
N292I292VAtcGtc22AY.390.000049
N292I292TaTcaCc22AY.390.000049
N292I292IatCatT22AY.420.00008
N292I292TaTcaCc22AY.46.20.001271
N292I292IatCatT22AY.46.60.000144
N292I292TaTcaCc22AY.470.000062
N292I292IatCatT22AY.550.001835
N292I292NaTcaAc22AY.580.001815
N292I292IatCatT22AY.590.001059
N292I292IatCatT22AY.700.000417
N292I292IatCatT22AY.990.002099
N292I292LAtcCtc22B.1.10.000036
N292I292IatCatT22B.1.1.1280.014184
N292I292LAtcCtc22B.1.1.1700.002494
N292I292IatCatT22B.1.1.1740.006757
N292I292IatCatT22B.1.1.2430.008163
N292I292IatCatT22B.1.1.2690.002706
N292I292TaTcaCc22B.1.1.3180.000604
N292I292SaTcaGc22B.1.1.3180.000604
N292I292IatCatT22B.1.1.3290.007692
N292I292IatCatT22B.1.1.5210.010695
N292I292LAtcCtc22B.1.1.70.000002
N292I292IatCatT22B.1.110.30.001437
N292I292VAtcGtc22B.1.160.280.005848
N292I292IatCatT22B.1.177.420.001789
N292I292IatCatT22B.1.177.70.00033
N292I292IatCatT22B.1.177.750.002081
N292I292IatCatT22B.1.214.30.014286
N292I292TaTcaCc22B.1.36.180.00084
N292I292IatCatA12B.1.36.180.00042
N292I292IatCatT12B.1.36.180.00042
N292I292IatCatT22B.1.36.220.002415
N292I292IatCatT22B.1.36.80.002
N292I292IatCatT22B.1.4700.002809
N292I292TaTcaCc22B.1.4990.002101
N292I292IatCatT22B.1.4990.002101
N292I292TaTcaCc22B.1.5260.000047
N292I292IatCatT22B.1.5410.00885
N292I292IatCatT22B.1.5640.000852
N292I292TaTcaCc22B.1.5960.000174
N292I292SaTcaGc22B.1.617.20.000008
N292I292IatCatT22B.1.6190.001742
N292I292TaTcaCc22B.40.004415
N292I292IatCatT22P.1.70.000639
N292I292IatCatT22S.10.009901
N292I292IatCatT11A.20.000662
N292I292TaTcaCc11A.20.000662
N292I292IatCatA11A.270.001656
N292I292IatCatT11AD.20.000219
N292I292PATCCCA11All0
N292I292del1aTca-c11All0
N292I292del2ATC--N11All0
N292I292TaTcaCc11AY.1030.000006
N292I292IatCatT11AY.1050.000643
N292I292IatCatT11AY.1060.000335
N292I292IatCatT11AY.1090.00074
N292I292VAtcGtc11AY.1130.000142
N292I292IatCatT11AY.1130.000142
N292I292TaTcaCc11AY.1170.000085
N292I292IatCatT11AY.1180.000063
N292I292IatCatT11AY.120.000316
N292I292TaTcaCc11AY.130.000161
N292I292IatCatT11AY.140.000088
N292I292NaTcaAc11AY.170.008197
N292I292TaTcaCc11AY.20.000356
N292I292VAtcGtc11AY.200.000039
N292I292TaTcaCc11AY.230.00007
N292I292VAtcGtc11AY.230.00007
N292I292LAtcCtc11AY.230.00007
N292I292delATC---11AY.250.000006
N292I292TaTcaCc11AY.260.000028
N292I292VAtcGtc11AY.280.00189
N292I292NaTcaAc11AY.30.00001
N292I292MatCatG11AY.300.000396
N292I292IatCatT11AY.310.018519
N292I292IatCatT11AY.350.000233
N292I292VAtcGtc11AY.39.10.00004
N292I292TaTcaCc11AY.39.10.00004
N292I292LAtcCtc11AY.40.000002
N292I292VAtcGtc11AY.4.20.000022
N292I292IatCatT11AY.4.2.10.000149
N292I292IatCatT11AY.4.50.000107
N292I292LAtcCtc11AY.420.00004
N292I292SaTcaGc11AY.430.000004
N292I292LAtcCtc11AY.430.000004
N292I292LAtcCtc11AY.440.000006
N292I292TaTcaCc11AY.46.10.001027
N292I292IatCatT11AY.46.50.000198
N292I292IatCatT11AY.5.30.000337
N292I292IatCatT11AY.5.40.000277
N292I292MatCatG11AY.510.000909
N292I292VAtcGtc11AY.540.000095
N292I292VAtcGtc11AY.60.000041
N292I292IatCatT11AY.640.000595
N292I292delATC---11AY.670.000464
N292I292IatCatT11AY.670.000464
N292I292TaTcaCc11AY.680.000274
N292I292IatCatT11AY.7.10.000113
N292I292TaTcaCc11AY.730.000665
N292I292delATC---11AY.750.000056
N292I292IatCatT11AY.770.001127
N292I292TaTcaCc11AY.790.001211
N292I292IatCatT11AY.810.001992
N292I292IatCatT11AY.860.00083
N292I292NaTcaAc11AY.870.000833
N292I292IatCatT11AY.880.000884
N292I292TaTcaCc11AY.9.20.000037
N292I292IatCatT11AY.9.20.000037
N292I292IatCatT11AY.930.000273
N292I292TaTcaCc11AY.930.000273
N292I292IatCatT11AY.950.000761
N292I292NaTcaAc11AY.960.002075
N292I292TaTcaCc11AY.98.10.000048
N292I292TaTcaCc11AY.99.20.000092
N292I292delATC---11B.10.000009
N292I292NaTcaAc11B.10.000009
N292I292delATC---11B.1.10.000018
N292I292IatCatT11B.1.1.100.001115
N292I292IatCatT11B.1.1.1170.009709
N292I292IatCatT11B.1.1.1210.002427
N292I292IatCatT11B.1.1.1940.00495
N292I292IatCatT11B.1.1.1980.001468
N292I292TaTcaCc11B.1.1.270.00565
N292I292IatCatT11B.1.1.2840.000107
N292I292VAtcGtc11B.1.1.3060.000438
N292I292IatCatT11B.1.1.3120.001912
N292I292TaTcaCc11B.1.1.3320.03125
N292I292TaTcaCc11B.1.1.3560.008547
N292I292TaTcaCc11B.1.1.3620.005618
N292I292IatCatT11B.1.1.3720.000689
N292I292IatCatT11B.1.1.3970.002252
N292I292IatCatT11B.1.1.4130.006897
N292I292IatCatT11B.1.1.4160.000905
N292I292IatCatT11B.1.1.4170.002703
N292I292VAtcGtc11B.1.1.4580.041667
N292I292IatCatT11B.1.1.5230.001563
N292I292IatCatT11B.1.1.5260.003546
N292I292IatCatT11B.1.1.530.013699
N292I292del2ATC--N11B.1.1.70.000001
N292I292NaTcaAc11B.1.1.70.000001
N292I292TaTcaCc11B.1.1.700.000341
N292I292TaTcaCc11B.1.1040.00369
N292I292IatCatT11B.1.1460.004237
N292I292IatCatT11B.1.160.210.020408
N292I292TaTcaCc11B.1.1700.00431
N292I292FAtcTtc11B.1.1770.000013
N292I292IatCatT11B.1.177.230.003236
N292I292IatCatA11B.1.177.40.000211
N292I292VAtcGtc11B.1.177.510.004566
N292I292TaTcaCc11B.1.177.510.004566
N292I292PATCCCA11B.1.177.630.002703
N292I292VAtcGtc11B.1.177.70.000165
N292I292IatCatT11B.1.177.730.000566
N292I292TaTcaCc11B.1.177.730.000566
N292I292IatCatT11B.1.177.770.000726
N292I292IatCatT11B.1.177.830.001481
N292I292delATC---11B.1.177.830.001481
N292I292IatCatT11B.1.177.860.000183
N292I292NaTcaAc11B.1.177.870.000728
N292I292delATC---11B.1.20.000009
N292I292del1aTca-c11B.1.20.000009
N292I292NaTcaAc11B.1.20.000009
N292I292VAtcGtc11B.1.20.000009
N292I292TaTcaCc11B.1.2010.005682
N292I292IatCatT11B.1.2100.002132
N292I292IatCatT11B.1.2140.003663
N292I292IatCatT11B.1.214.10.02
N292I292VAtcGtc11B.1.214.20.0006
N292I292delATC---11B.1.2210.000071
N292I292VAtcGtc11B.1.2340.000132
N292I292TaTcaCc11B.1.2580.000067
N292I292IatCatT11B.1.258.110.000396
N292I292IatCatT11B.1.258.120.007874
N292I292IatCatT11B.1.3190.003049
N292I292IatCatT11B.1.3240.001605
N292I292IatCatT11B.1.3440.008197
N292I292LAtcCtc11B.1.3510.00003
N292I292IatCatT11B.1.351.20.000303
N292I292FAtcTtc11B.1.36.360.000602
N292I292IatCatT11B.1.3610.001289
N292I292IatCatT11B.1.3620.001541
N292I292IatCatT11B.1.362.10.066667
N292I292IatCatT11B.1.3800.006623
N292I292IatCatT11B.1.3890.001002
N292I292TaTcaCc11B.1.4040.001302
N292I292IatCatT11B.1.4260.001009
N292I292IatCatT11B.1.4280.00102
N292I292LAtcCtc11B.1.4290.000024
N292I292LAtcCtc11B.1.438.10.000107
N292I292TaTcaCc11B.1.4590.004082
N292I292IatCatT11B.1.466.20.000391
N292I292TaTcaCc11B.1.466.20.000391
N292I292IatCatT11B.1.4710.002732
N292I292IatCatT11B.1.4730.019231
N292I292TaTcaCc11B.1.4790.038462
N292I292IatCatT11B.1.5240.001406
N292I292NaTcaAc11B.1.5250.000113
N292I292LAtcCtc11B.1.5260.000024
N292I292IatCatA11B.1.5330.009615
N292I292LAtcCtc11B.1.5400.009709
N292I292IatCatT11B.1.5510.00129
N292I292delATC---11B.1.5600.00463
N292I292IatCatT11B.1.5610.000397
N292I292IatCatT11B.1.5960.000087
N292I292IatCatT11B.1.5990.00365
N292I292NaTcaAc11B.1.5990.00365
N292I292NaTcaAc11B.1.617.20.000004
N292I292TaTcaCc11B.1.6210.000089
N292I292IatCatT11B.1.6280.000352
N292I292TaTcaCc11B.1.910.002075
N292I292IatCatT11B.400.000364
N292I292TaTcaCc11C.1.20.004255
N292I292IatCatT11C.20.016129
N292I292TaTcaCc11C.270.018519
N292I292IatCatT11C.360.000911
N292I292TaTcaCc11C.370.000116
N292I292TaTcaCc11C.390.018868
N292I292LAtcCtc11D.20.000075
N292I292TaTcaCc11P.1.120.000484
N292I292TaTcaCc11P.1.150.000232
N292I292TaTcaCc11P.1.70.000319
N292I292TaTcaCc11P.20.000187
N292I292IatCatT11P.30.001595
N292I292IatCatT11Q.30.000145
N292I292VAtcGtc11R.10.00009