CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : CodonNum = 261

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N261K261KsynaaAaaG564564129054-29056
N261K261deldelAAA---1818129054-29056
N261K261RnonsynaAaaGa1170.63636429054-29056
N261K261RnonsynAAACGT1110.090909129054-29056
N261K261RnonsynAAACGC1110.090909129054-29056
N261K261RnonsynAAaCGa1110.090909129054-29056
N261K261RnonsynaAAaGG1110.090909129054-29056
N261K261NnonsynaaAaaC840.529054-29056
N261K261NnonsynaaAaaT840.529054-29056
N261K261SnonsynaAAaGC430.7529054-29056
N261K261QnonsynAaaCaa420.529054-29056
N261K261QnonsynAaACaG420.529054-29056
N261K261TnonsynaAAaCT410.2529054-29056
N261K261SnonsynaAAaGT410.2529054-29056
N261K261TnonsynaAAaCG410.2529054-29056
N261K261TnonsynaAaaCa410.2529054-29056
N261K261TnonsynaAAaCC410.2529054-29056
N261K261InonsynaAaaTa33129054-29056
N261K261HnonsynAaACaC320.66666729054-29056
N261K261PnonsynAAACCT310.33333329054-29056
N261K261PnonsynAAACCC310.33333329054-29056
N261K261PnonsynAAaCCa310.33333329054-29056
N261K261HnonsynAaACaT310.33333329054-29056
N261K261EnonsynAaaGaa11129054-29056
N261K261del1delaaAaa-11129054-29056

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N261K261KaaAaaG564564All0.000108
N261K261KaaAaaG161161B.1.10.002921
N261K261KaaAaaG120120B.1.1.2510.952381
N261K261KaaAaaG8787B.1.5090.075325
N261K261KaaAaaG4545B.1.4290.001059
N261K261KaaAaaG2626B.1.1.70.000023
N261K261delAAA---1818All0.000003
N261K261RaAaaGa711All0.000001
N261K261RAAACGC111All0
N261K261RAAACGT111All0
N261K261RAAaCGa111All0
N261K261RaAAaGG111All0
N261K261KaaAaaG1111B.1.1600.000343
N261K261KaaAaaG1010AY.40.000016
N261K261KaaAaaG99AY.440.000055
N261K261KaaAaaG99B.10.000082
N261K261NaaAaaT48All0.000001
N261K261NaaAaaC48All0.000001
N261K261KaaAaaG66AY.290.000095
N261K261KaaAaaG66AY.30.00006
N261K261KaaAaaG55AY.1200.000186
N261K261KaaAaaG55AY.50.000103
N261K261KaaAaaG55B.1.20.000044
N261K261KaaAaaG55B.1.2340.00066
N261K261KaaAaaG55B.1.617.20.000019
N261K261SaAAaGC34All0.000001
N261K261QAaaCaa24All0
N261K261QAaACaG24All0
N261K261TaAAaCG14All0
N261K261TaAAaCC14All0
N261K261TaAAaCT14All0
N261K261TaAaaCa14All0
N261K261SaAAaGT14All0
N261K261RaAaaGa14AY.30.00001
N261K261RAAaCGa14AY.30.00001
N261K261RAAACGC14AY.30.00001
N261K261RAAACGT14AY.30.00001
N261K261KaaAaaG44AY.430.000018
N261K261KaaAaaG44B.1.4270.000202
N261K261IaAaaTa33All0.000001
N261K261HAaACaC23All0
N261K261PAAaCCa13All0
N261K261PAAACCT13All0
N261K261HAaACaT13All0
N261K261PAAACCC13All0
N261K261delAAA---33AY.250.000018
N261K261TaAAaCC13AY.30.00001
N261K261TaAAaCT13AY.30.00001
N261K261PAAaCCa13AY.30.00001
N261K261PAAACCC13AY.30.00001
N261K261PAAACCT13AY.30.00001
N261K261TaAaaCa13AY.30.00001
N261K261KaaAaaG33B.1.5260.000071
N261K261NaaAaaC220.111111
N261K261KaaAaaG22AY.1020.000053
N261K261RaAaaGa22AY.1180.000125
N261K261KaaAaaG22AY.1190.000071
N261K261KaaAaaG22AY.200.000078
N261K261KaaAaaG22AY.250.000012
N261K261KaaAaaG22AY.260.000057
N261K261NaaAaaC12AY.30.00001
N261K261NaaAaaT12AY.30.00001
N261K261HAaACaT12AY.30.00001
N261K261HAaACaC12AY.30.00001
N261K261SaAAaGC12AY.30.00001
N261K261SaAAaGT12AY.30.00001
N261K261NaaAaaT22B.10.000018
N261K261delAAA---22B.10.000018
N261K261KaaAaaG22B.1.3610.002577
N261K261KaaAaaG22P.1.140.000096
N261K261KaaAaaG11A.190.009434
N261K261EAaaGaa11All0
N261K261del1aaAaa-11All0
N261K261delAAA---11AY.1000.000046
N261K261delAAA---11AY.1020.000027
N261K261KaaAaaG11AY.1030.000006
N261K261KaaAaaG11AY.1060.000335
N261K261KaaAaaG11AY.1210.000135
N261K261KaaAaaG11AY.16.10.00047
N261K261RaAaaGa11AY.200.000039
N261K261QAaaCaa11AY.30.00001
N261K261KaaAaaG11AY.340.000097
N261K261delAAA---11AY.430.000004
N261K261IaAaaTa11AY.430.000004
N261K261delAAA---11AY.440.000006
N261K261SaAAaGC11AY.440.000006
N261K261KaaAaaG11AY.5.30.000337
N261K261KaaAaaG11AY.540.000095
N261K261delAAA---11AY.670.000464
N261K261delAAA---11AY.750.000056
N261K261KaaAaaG11AY.90.000068
N261K261delAAA---11AY.9.20.000037
N261K261KaaAaaG11AY.98.10.000048
N261K261SaAAaGC11B0.000128
N261K261KaaAaaG11B0.000128
N261K261TaAAaCG11B.10.000009
N261K261delAAA---11B.1.10.000018
N261K261EAaaGaa11B.1.10.000018
N261K261KaaAaaG11B.1.1.2190.005
N261K261KaaAaaG11B.1.1.2220.000204
N261K261RaAAaGG11B.1.1.270.00565
N261K261KaaAaaG11B.1.1.4040.015873
N261K261HAaACaC11B.1.1.70.000001
N261K261QAaaCaa11B.1.1.70.000001
N261K261NaaAaaC11B.1.1.70.000001
N261K261KaaAaaG11B.1.1260.001276
N261K261KaaAaaG11B.1.160.230.004831
N261K261RaAaaGa11B.1.177.630.002703
N261K261delAAA---11B.1.177.830.001481
N261K261IaAaaTa11B.1.351.20.000303
N261K261KaaAaaG11B.1.360.000146
N261K261delAAA---11B.1.3690.000285
N261K261delAAA---11B.1.4390.005917
N261K261KaaAaaG11B.1.5250.000113
N261K261RaAaaGa11B.1.5250.000113
N261K261QAaACaG11B.1.5600.00463
N261K261NaaAaaT11B.1.5610.000397
N261K261KaaAaaG11B.1.5610.000397
N261K261QAaACaG11B.1.617.20.000004
N261K261IaAaaTa11B.1.617.20.000004
N261K261del1aaAaa-11B.1.617.20.000004
N261K261delAAA---11B.1.617.20.000004
N261K261RaAaaGa11B.1.617.20.000004
N261K261KaaAaaG11B.1.6210.000089
N261K261KaaAaaG11B.1.6370.000073
N261K261KaaAaaG11B.1.940.027027
N261K261KaaAaaG11P.10.000016
N261K261KaaAaaG11P.1.100.000269
N261K261delAAA---11P.1.150.000232