CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : CodonNum = 257

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N257K257KsynaaGaaA37173717129042-29044
N257K257RnonsynaAgaGg183183129042-29044
N257K257deldelAAG---1515129042-29044
N257K257EnonsynAagGag870.87529042-29044
N257K257NnonsynaaGaaT860.7529042-29044
N257K257NnonsynaaGaaC820.2529042-29044
N257K257EnonsynAaGGaA810.12529042-29044
N257K257QnonsynAagCag55129042-29044
N257K257TnonsynaAgaCg33129042-29044
N257K257del1delaAGaG-310.33333329042-29044
N257K257del1delaaGaa-310.33333329042-29044
N257K257del1delAag-ag310.33333329042-29044
N257K257MnonsynaAgaTg22129042-29044
N257K257GnonsynAAgGGg11129042-29044
N257K257LnonsynAAgTTg11129042-29044
N257K257del2delaAGa--11129042-29044
N257K257VnonsynAAgGTg11129042-29044
N257K257SnonsynaAGaGC11129042-29044

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N257K257KaaGaaA37173717All0.000711
N257K257KaaGaaA16411641B.1.1.70.001469
N257K257KaaGaaA988988B.1.3890.98998
N257K257RaAgaGg183183All0.000035
N257K257KaaGaaA163163B.1.1.2840.017506
N257K257KaaGaaA124124B.10.001136
N257K257KaaGaaA116116AY.90.007841
N257K257KaaGaaA9797B.1.4970.030532
N257K257KaaGaaA9191Q.80.015007
N257K257KaaGaaA6161B.1.617.20.00023
N257K257KaaGaaA6060AY.440.000365
N257K257RaAgaGg3838B.1.1.70.000034
N257K257RaAgaGg3535AY.40.000054
N257K257KaaGaaA3535AY.430.000155
N257K257KaaGaaA3333AY.40.000051
N257K257KaaGaaA2626B.1.1770.000342
N257K257KaaGaaA2323AY.1030.000143
N257K257KaaGaaA2323B.1.1.5190.000913
N257K257KaaGaaA2323C.370.002669
N257K257KaaGaaA2020B.1.20.000176
N257K257RaAgaGg1818AY.1200.000669
N257K257RaAgaGg1717B.1.617.20.000064
N257K257delAAG---1515All0.000003
N257K257KaaGaaA1313AY.30.000129
N257K257KaaGaaA1212B.1.2180.061856
N257K257RaAgaGg1010B.1.5260.000235
N257K257KaaGaaA99AY.500.007194
N257K257EAagGag78All0.000001
N257K257NaaGaaT68All0.000001
N257K257NaaGaaC28All0
N257K257EAaGGaA18All0
N257K257KaaGaaA88AY.250.000048
N257K257KaaGaaA88B.1.6370.000585
N257K257KaaGaaA88P.1.70.002554
N257K257KaaGaaA77P.10.00011
N257K257KaaGaaA66AY.50.000124
N257K257KaaGaaA66B.1.10.000109
N257K257RaAgaGg66B.1.20.000053
N257K257QAagCag55All0.000001
N257K257RaAgaGg55AY.1030.000031
N257K257KaaGaaA55AY.1170.000423
N257K257KaaGaaA55AY.130.000805
N257K257RaAgaGg55AY.200.000194
N257K257RaAgaGg55AY.98.10.000242
N257K257KaaGaaA55B.1.6090.002397
N257K257RaAgaGg44B.1.3110.001098
N257K257KaaGaaA44Q.10.000505
N257K257TaAgaCg33All0.000001
N257K257del1aAGaG-13All0
N257K257del1aaGaa-13All0
N257K257del1Aag-ag13All0
N257K257KaaGaaA33AU.30.006329
N257K257KaaGaaA33AY.1020.00008
N257K257KaaGaaA33AY.1200.000112
N257K257RaAgaGg33AY.250.000018
N257K257KaaGaaA33AY.340.000291
N257K257RaAgaGg33AY.430.000013
N257K257KaaGaaA33AY.740.000347
N257K257KaaGaaA33B.1.1.2160.002671
N257K257KaaGaaA33B.1.2580.0002
N257K257KaaGaaA33B.1.36.390.006652
N257K257KaaGaaA33B.1.4270.000151
N257K257RaAgaGg33B.1.4290.000071
N257K257KaaGaaA33B.1.5090.002597
N257K257KaaGaaA33P.1.160.001122
N257K257KaaGaaA220.111111
N257K257MaAgaTg22All0
N257K257RaAgaGg22AY.1020.000053
N257K257KaaGaaA22AY.1060.00067
N257K257KaaGaaA22AY.1190.000071
N257K257delAAG---22AY.250.000012
N257K257MaAgaTg22AY.250.000012
N257K257KaaGaaA22AY.260.000057
N257K257RaAgaGg22AY.3.10.000171
N257K257KaaGaaA22AY.650.001066
N257K257KaaGaaA22AY.690.000373
N257K257KaaGaaA22AY.750.000112
N257K257KaaGaaA22AY.980.000158
N257K257RaAgaGg22B.10.000018
N257K257delAAG---22B.10.000018
N257K257RaAgaGg22B.1.10.000036
N257K257EAagGag22B.1.10.000036
N257K257KaaGaaA22B.1.1.3260.003521
N257K257KaaGaaA22B.1.1.330.000842
N257K257QAagCag22B.1.1.70.000002
N257K257NaaGaaC22B.1.1.70.000002
N257K257KaaGaaA22B.1.1.700.000682
N257K257KaaGaaA22B.1.177.810.000379
N257K257RaAgaGg22B.1.3510.000059
N257K257KaaGaaA22B.1.4000.000858
N257K257KaaGaaA22B.1.6000.011696
N257K257KaaGaaA22B.1.6210.000177
N257K257RaAgaGg22P.10.000032
N257K257KaaGaaA22P.1.120.000968
N257K257RaAgaGg22P.1.140.000096
N257K257KaaGaaA11AE.80.000489
N257K257SaAGaGC11All0
N257K257LAAgTTg11All0
N257K257GAAgGGg11All0
N257K257VAAgGTg11All0
N257K257del2aAGa--11All0
N257K257delAAG---11AY.1000.000046
N257K257EAagGag11AY.1040.001984
N257K257RaAgaGg11AY.1170.000085
N257K257KaaGaaA11AY.120.000316
N257K257RaAgaGg11AY.120.000316
N257K257KaaGaaA11AY.200.000039
N257K257RaAgaGg11AY.260.000028
N257K257RaAgaGg11AY.390.000025
N257K257RaAgaGg11AY.4.20.000022
N257K257KaaGaaA11AY.4.20.000022
N257K257RaAgaGg11AY.410.000294
N257K257RaAgaGg11AY.440.000006
N257K257delAAG---11AY.440.000006
N257K257KaaGaaA11AY.450.000122
N257K257KaaGaaA11AY.460.000104
N257K257KaaGaaA11AY.46.50.000198
N257K257KaaGaaA11AY.470.000031
N257K257delAAG---11AY.670.000464
N257K257delAAG---11AY.750.000056
N257K257KaaGaaA11AY.75.10.00018
N257K257RaAgaGg11AY.75.10.00018
N257K257delAAG---11AY.9.20.000037
N257K257RaAgaGg11AY.930.000273
N257K257RaAgaGg11AY.980.000079
N257K257KaaGaaA11AY.98.10.000048
N257K257KaaGaaA11AY.99.20.000092
N257K257EAagGag11B0.000128
N257K257EAagGag11B.10.000009
N257K257LAAgTTg11B.10.000009
N257K257QAagCag11B.10.000009
N257K257NaaGaaT11B.10.000009
N257K257GAAgGGg11B.1.10.000018
N257K257delAAG---11B.1.10.000018
N257K257del1Aag-ag11B.1.10.000018
N257K257EAaGGaA11B.1.1.270.00565
N257K257KaaGaaA11B.1.1.2730.006757
N257K257RaAgaGg11B.1.1.2910.000742
N257K257KaaGaaA11B.1.1.2970.002237
N257K257VAAgGTg11B.1.1.70.000001
N257K257del1aaGaa-11B.1.1.70.000001
N257K257TaAgaCg11B.1.1.70.000001
N257K257EAagGag11B.1.1.70.000001
N257K257KaaGaaA11B.1.1280.000635
N257K257KaaGaaA11B.1.130.002375
N257K257SaAGaGC11B.1.177.630.002703
N257K257KaaGaaA11B.1.177.730.000566
N257K257TaAgaCg11B.1.177.730.000566
N257K257delAAG---11B.1.177.830.001481
N257K257KaaGaaA11B.1.177.840.006667
N257K257NaaGaaT11B.1.177.860.000183
N257K257KaaGaaA11B.1.2430.00007
N257K257RaAgaGg11B.1.2580.000067
N257K257RaAgaGg11B.1.258.170.000104
N257K257KaaGaaA11B.1.258.170.000104
N257K257RaAgaGg11B.1.2650.001271
N257K257RaAgaGg11B.1.3360.002439
N257K257KaaGaaA11B.1.360.000146
N257K257delAAG---11B.1.3690.000285
N257K257KaaGaaA11B.1.4290.000024
N257K257delAAG---11B.1.4390.005917
N257K257KaaGaaA11B.1.466.20.000391
N257K257KaaGaaA11B.1.5250.000113
N257K257KaaGaaA11B.1.5260.000024
N257K257KaaGaaA11B.1.5410.004425
N257K257KaaGaaA11B.1.5950.000261
N257K257NaaGaaT11B.1.5950.000261
N257K257del1aAGaG-11B.1.617.10.000129
N257K257QAagCag11B.1.617.20.000004
N257K257delAAG---11B.1.617.20.000004
N257K257KaaGaaA11B.1.617.30.002985
N257K257delAAG---11B.1.6210.000089
N257K257KaaGaaA11B.4.60.016667
N257K257EAagGag11B.550.00295
N257K257NaaGaaT11B.60.00091
N257K257NaaGaaT11D.20.000075
N257K257RaAgaGg11D.20.000075
N257K257KaaGaaA11D.20.000075
N257K257QAagCag11D.20.000075
N257K257TaAgaCg11P.1.10.000318
N257K257KaaGaaA11P.1.140.000048
N257K257del2aAGa--11P.1.150.000232
N257K257KaaGaaA11P.1.17.10.000875
N257K257NaaGaaT11Q.30.000145
N257K257RaAgaGg11Q.40.000455
N257K257KaaGaaA11R.10.00009