CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : CodonNum = 252

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N252A252SnonsynGctTct33793379129027-29029
N252A252VnonsyngCtgTt16821682129027-29029
N252A252AsyngcTgcC7635620.73656629027-29029
N252A252AsyngcTgcA7631820.23853229027-29029
N252A252AsyngcTgcG763190.024901729027-29029
N252A252TnonsynGctAct2082070.99519229027-29029
N252A252TnonsynGcTAcG20810.0048076929027-29029
N252A252deldelGCT---4242129027-29029
N252A252DnonsyngCtgAt2424129027-29029
N252A252GnonsyngCtgGt760.85714329027-29029
N252A252GnonsyngCTgGG710.14285729027-29029
N252A252PnonsynGctCct650.83333329027-29029
N252A252del1delgcTgc-630.529027-29029
N252A252del1delGct-ct630.529027-29029
N252A252PnonsynGcTCcG610.16666729027-29029
N252A252FnonsynGCtTTt33129027-29029
N252A252del2delGCT--C11129027-29029
N252A252LnonsynGCtCTt11129027-29029
N252A252EnonsyngCTgAG11129027-29029
N252A252NnonsynGCtAAt11129027-29029
N252A252YnonsynGCtTAt11129027-29029
N252A252KnonsynGCTAAG11129027-29029

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N252A252SGctTct33793379All0.000646
N252A252VgCtgTt16821682All0.000322
N252A252AgcTgcC562763All0.000107
N252A252AgcTgcA182763All0.000035
N252A252AgcTgcG19763All0.000004
N252A252SGctTct478478AY.40.000744
N252A252VgCtgTt444444AY.40.000691
N252A252SGctTct414414B.1.1.70.000371
N252A252SGctTct404404AY.390.009983
N252A252SGctTct315315B.1.1.2980.271552
N252A252SGctTct288288B.1.177.190.412017
N252A252VgCtgTt270270B.1.617.20.001017
N252A252AgcTgcC219228B.1.1.70.000196
N252A252AgcTgcA6228B.1.1.70.000005
N252A252AgcTgcG3228B.1.1.70.000003
N252A252TGctAct207208All0.00004
N252A252TGcTAcG1208All0
N252A252VgCtgTt168168B.1.1.70.00015
N252A252SGctTct128128B.1.3510.003805
N252A252SGctTct104104B.1.617.20.000392
N252A252AgcTgcC102103AY.230.007114
N252A252AgcTgcA1103AY.230.00007
N252A252VgCtgTt8181AY.30.000806
N252A252SGctTct8181AY.430.000359
N252A252SGctTct8080B.1.2430.005567
N252A252SGctTct7272AY.1030.000447
N252A252AgcTgcC5066AY.40.000078
N252A252AgcTgcA1366AY.40.00002
N252A252AgcTgcG366AY.40.000005
N252A252SGctTct6666B.10.000605
N252A252VgCtgTt6262B.1.5960.005403
N252A252SGctTct6060B.1.177.790.140515
N252A252VgCtgTt5555AY.1030.000341
N252A252SGctTct5454B.1.1600.001684
N252A252SGctTct5353AY.440.000323
N252A252VgCtgTt5151AY.440.00031
N252A252TGctAct4848AY.430.000213
N252A252SGctTct4545AY.9.2.10.088933
N252A252delGCT---4242All0.000008
N252A252SGctTct4141AY.30.000408
N252A252TGctAct4141B.1.1.70.000037
N252A252AgcTgcA3939AY.1020.001034
N252A252AgcTgcA3737AY.1090.027367
N252A252SGctTct3636AY.800.040632
N252A252VgCtgTt3535AY.980.002765
N252A252AgcTgcA2335B.1.617.20.000087
N252A252AgcTgcC1235B.1.617.20.000045
N252A252VgCtgTt3131AY.140.002728
N252A252AgcTgcA3031AY.390.000741
N252A252AgcTgcC131AY.390.000025
N252A252SGctTct3030AY.250.00018
N252A252AgcTgcC2930AY.30.000288
N252A252AgcTgcA130AY.30.00001
N252A252SGctTct2929B.1.10.000526
N252A252VgCtgTt2828B.1.20.000247
N252A252VgCtgTt2727AY.4.50.002902
N252A252VgCtgTt2727AY.430.00012
N252A252SGctTct2727B.1.20.000238
N252A252SGctTct2727P.10.000425
N252A252SGctTct2626B.1.1770.000342
N252A252DgCtgAt2424All0.000005
N252A252VgCtgTt2424B.1.5610.009528
N252A252SGctTct2020B.1.1.2070.023641
N252A252SGctTct2020B.1.1.700.006821
N252A252TGctAct1919AY.40.00003
N252A252VgCtgTt1717B.1.2430.001183
N252A252VgCtgTt1515B.10.000137
N252A252SGctTct1515B.1.1.3690.006693
N252A252SGctTct1515B.1.177.291
N252A252AgcTgcC1414AY.1030.000087
N252A252VgCtgTt1414AY.250.000084
N252A252VgCtgTt1414AY.330.000935
N252A252VgCtgTt1414AY.9.20.000514
N252A252SGctTct1414B.1.1.5190.000556
N252A252TGctAct1414B.1.617.20.000053
N252A252TGctAct1313AY.1170.001099
N252A252VgCtgTt1313AY.98.10.00063
N252A252AgcTgcC1313B.1.1.5000.26
N252A252SGctTct1313B.1.1200.1
N252A252SGctTct1313B.1.4290.000306
N252A252AgcTgcC1112B.10.000101
N252A252AgcTgcA112B.10.000009
N252A252VgCtgTt1212B.1.1.4200.012072
N252A252SGctTct1212B.1.5260.000282
N252A252SGctTct1111AY.1200.000409
N252A252VgCtgTt1111AY.260.000311
N252A252VgCtgTt1111B.1.10.0002
N252A252SGctTct1010AY.200.000389
N252A252SGctTct99AY.1020.000239
N252A252VgCtgTt99AY.290.000142
N252A252VgCtgTt99AY.340.000873
N252A252SGctTct99AY.640.005357
N252A252VgCtgTt99AY.90.000608
N252A252SGctTct88AY.980.000632
N252A252AgcTgcC48B.1.10.000073
N252A252AgcTgcA38B.1.10.000054
N252A252AgcTgcG18B.1.10.000018
N252A252SGctTct88B.1.1.1530.008762
N252A252VgCtgTt88B.1.1.1590.037383
N252A252SGctTct88B.1.5960.000697
N252A252GgCtgGt67All0.000001
N252A252GgCTgGG17All0
N252A252VgCtgTt77AY.1190.000247
N252A252AgcTgcA47AY.440.000024
N252A252AgcTgcC37AY.440.000018
N252A252SGctTct77AY.450.000852
N252A252VgCtgTt77AY.470.000218
N252A252DgCtgAt77AY.470.000218
N252A252SGctTct77AY.9.20.000257
N252A252SGctTct77AY.98.10.000339
N252A252VgCtgTt77B.1.1770.000092
N252A252VgCtgTt77B.1.177.730.003964
N252A252AgcTgcA47B.1.20.000035
N252A252AgcTgcC27B.1.20.000018
N252A252AgcTgcG17B.1.20.000009
N252A252SGctTct77B.1.5750.002124
N252A252SGctTct77P.1.70.002235
N252A252PGctCct56All0.000001
N252A252del1Gct-ct36All0.000001
N252A252del1gcTgc-36All0.000001
N252A252PGcTCcG16All0
N252A252VgCtgTt66AY.1010.002943
N252A252SGctTct66AY.1170.000507
N252A252AgcTgcG46AY.1190.000141
N252A252AgcTgcA26AY.1190.000071
N252A252AgcTgcC66AY.150.013333
N252A252SGctTct66AY.330.000401
N252A252VgCtgTt66AY.390.000148
N252A252SGctTct66AY.46.50.00119
N252A252SGctTct66AY.990.006296
N252A252SGctTct66B.1.1.3180.001811
N252A252delGCT---66B.1.1.70.000005
N252A252VgCtgTt66B.1.1600.000187
N252A252TGctAct66B.1.20.000053
N252A252SGctTct66D.20.00045
N252A252SGctTct66Q.40.002729
N252A252SGctTct55AY.1000.00023
N252A252VgCtgTt55AY.1020.000133
N252A252SGctTct55AY.230.000349
N252A252AgcTgcC45AY.250.000024
N252A252AgcTgcG15AY.250.000006
N252A252SGctTct55AY.260.000142
N252A252SGctTct55AY.290.000079
N252A252TGctAct55AY.30.00005
N252A252SGctTct55AY.39.10.000198
N252A252SGctTct55AY.410.00147
N252A252SGctTct55AY.50.000103
N252A252SGctTct55AY.610.000524
N252A252DgCtgAt55B.10.000046
N252A252TGctAct55B.10.000046
N252A252VgCtgTt55B.1.1.2690.006766
N252A252SGctTct55B.1.1.3110.001791
N252A252SGctTct55B.1.2210.000355
N252A252VgCtgTt55B.1.2210.000355
N252A252VgCtgTt55B.1.3510.000149
N252A252SGctTct55B.1.351.30.004382
N252A252SGctTct55B.1.360.00073
N252A252SGctTct55B.1.619.10.003207
N252A252VgCtgTt55B.1.6250.011765
N252A252VgCtgTt55B.400.001821
N252A252TGctAct44AY.1020.000106
N252A252VgCtgTt44AY.1060.00134
N252A252VgCtgTt44AY.1170.000338
N252A252SGctTct44AY.1190.000141
N252A252VgCtgTt44AY.230.000279
N252A252VgCtgTt44AY.3.10.000341
N252A252VgCtgTt44AY.39.10.000158
N252A252VgCtgTt44AY.420.000161
N252A252TGctAct44AY.440.000024
N252A252DgCtgAt44AY.610.000419
N252A252SGctTct44AY.75.10.000721
N252A252SGctTct44AY.90.00027
N252A252AgcTgcC44B.1.1470.003023
N252A252AgcTgcC44B.1.177.120.000607
N252A252SGctTct44B.1.177.210.000306
N252A252AgcTgcC44B.1.177.560.00267
N252A252SGctTct44B.1.2580.000266
N252A252AgcTgcC44P.10.000063
N252A252VgCtgTt44P.1.140.000191
N252A252TGctAct44P.1.140.000191
N252A252FGCtTTt33All0.000001
N252A252delGCT---33AY.1030.000019
N252A252VgCtgTt33AY.1110.000549
N252A252SGctTct33AY.16.10.00141
N252A252delGCT---33AY.250.000018
N252A252TGctAct33AY.460.000312
N252A252SGctTct33AY.460.000312
N252A252SGctTct33AY.470.000093
N252A252AgcTgcC33AY.470.000093
N252A252TGctAct33AY.50.000062
N252A252SGctTct33AY.7.10.000338
N252A252VgCtgTt33AY.750.000168
N252A252VgCtgTt33AY.920.000862
N252A252AgcTgcC33B0.000383
N252A252SGctTct33B0.000383
N252A252SGctTct33B.1.1.2220.000612
N252A252SGctTct33B.1.1.3060.001315
N252A252VgCtgTt33B.1.1.4080.083333
N252A252AgcTgcC23B.1.1770.000026
N252A252AgcTgcA13B.1.1770.000013
N252A252VgCtgTt33B.1.177.210.000229
N252A252AgcTgcC33B.1.177.520.005272
N252A252VgCtgTt33B.1.2340.000396
N252A252AgcTgcG23B.1.2430.000139
N252A252AgcTgcC13B.1.2430.00007
N252A252VgCtgTt33B.1.2580.0002
N252A252VgCtgTt33B.1.258.170.000312
N252A252SGctTct33B.1.3690.000856
N252A252TGctAct33B.1.3960.002117
N252A252SGctTct33B.1.5250.000339
N252A252VgCtgTt33B.1.5260.000071
N252A252AgcTgcC33B.1.5710.029126
N252A252VgCtgTt33B.1.5770.002062
N252A252SGctTct33B.1.617.10.000387
N252A252AgcTgcA23B.1.6210.000177
N252A252AgcTgcC13B.1.6210.000089
N252A252SGctTct33B.40.006623
N252A252SGctTct33P.1.140.000143
N252A252SGctTct33P.1.40.00293
N252A252VgCtgTt33R.10.00027
N252A252TGctAct22AY.1000.000092
N252A252GgCtgGt22AY.1030.000012
N252A252SGctTct22AY.1160.000574
N252A252VgCtgTt22AY.116.10.000623
N252A252TGctAct22AY.116.10.000623
N252A252AgcTgcC22AY.1170.000169
N252A252VgCtgTt22AY.1180.000125
N252A252TGctAct22AY.1190.000071
N252A252SGctTct22AY.1210.000271
N252A252VgCtgTt22AY.130.000322
N252A252SGctTct22AY.140.000176
N252A252VgCtgTt22AY.160.000759
N252A252VgCtgTt22AY.200.000078
N252A252TGctAct22AY.230.000139
N252A252AgcTgcC22AY.290.000032
N252A252SGctTct22AY.300.000791
N252A252SGctTct22AY.360.000296
N252A252VgCtgTt22AY.4.20.000043
N252A252SGctTct22AY.4.20.000043
N252A252AgcTgcC22AY.4.2.10.000298
N252A252SGctTct22AY.4.50.000215
N252A252AgcTgcA12AY.4.50.000107
N252A252AgcTgcC12AY.4.50.000107
N252A252delGCT---22AY.440.000012
N252A252VgCtgTt22AY.460.000208
N252A252TGctAct22AY.46.50.000397
N252A252delGCT---22AY.470.000062
N252A252VgCtgTt22AY.50.000041
N252A252SGctTct22AY.5.30.000675
N252A252VgCtgTt22AY.510.001818
N252A252SGctTct22AY.530.000575
N252A252VgCtgTt22AY.590.001059
N252A252delGCT---22AY.750.000112
N252A252SGctTct22AY.770.002255
N252A252SGctTct22AY.9.10.000167
N252A252AgcTgcA22AY.920.000575
N252A252SGctTct22AY.940.000885
N252A252SGctTct22AY.950.001522
N252A252VgCtgTt22AY.99.20.000184
N252A252TGcTAcG12B.1.10.000018
N252A252TGctAct12B.1.10.000018
N252A252SGctTct22B.1.1.1640.010309
N252A252SGctTct22B.1.1.2140.000111
N252A252VgCtgTt22B.1.1.2140.000111
N252A252VgCtgTt22B.1.1.2160.001781
N252A252SGctTct22B.1.1.250.001137
N252A252VgCtgTt22B.1.1.3070.005063
N252A252SGctTct22B.1.1.330.000842
N252A252VgCtgTt22B.1.1.370.000386
N252A252SGctTct22B.1.1.4340.000697
N252A252delGCT---22B.1.1.5190.000079
N252A252VgCtgTt22B.1.130.004751
N252A252SGctTct22B.1.177.320.002699
N252A252SGctTct22B.1.177.730.001133
N252A252SGctTct22B.1.3010.011834
N252A252AgcTgcC22B.1.3240.00321
N252A252AgcTgcC22B.1.3510.000059
N252A252AgcTgcA22B.1.36.180.00084
N252A252SGctTct22B.1.3960.001411
N252A252SGctTct22B.1.4270.000101
N252A252TGctAct22B.1.438.10.000215
N252A252AgcTgcC22B.1.466.20.000782
N252A252VgCtgTt22B.1.4700.002809
N252A252VgCtgTt22B.1.5090.001732
N252A252TGctAct22B.1.5260.000047
N252A252SGctTct22B.1.5390.035088
N252A252AgcTgcC22B.1.5640.000852
N252A252AgcTgcC22B.1.5960.000174
N252A252del1gcTgc-22B.1.617.10.000258
N252A252DgCtgAt22B.1.617.20.000008
N252A252SGctTct22B.1.6210.000177
N252A252AgcTgcC22B.40.004415
N252A252VgCtgTt22P.10.000032
N252A252AgcTgcC22P.1.140.000096
N252A252SGctTct22P.20.000373
N252A252SGctTct22R.10.00018
N252A252SGctTct11A0.000387
N252A252VgCtgTt11A.10.000282
N252A252AgcTgcC11A.2.50.000499
N252A252AgcTgcC11A.70.055556
N252A252VgCtgTt11AD.20.000219
N252A252KGCTAAG11All0
N252A252EgCTgAG11All0
N252A252del2GCT--C11All0
N252A252YGCtTAt11All0
N252A252NGCtAAt11All0
N252A252LGCtCTt11All0
N252A252VgCtgTt11AY.10.000396
N252A252AgcTgcC11AY.1000.000046
N252A252delGCT---11AY.1000.000046
N252A252VgCtgTt11AY.1000.000046
N252A252SGctTct11AY.1010.00049
N252A252delGCT---11AY.1020.000027
N252A252DgCtgAt11AY.1030.000006
N252A252TGctAct11AY.1030.000006
N252A252AgcTgcA11AY.1050.000643
N252A252SGctTct11AY.1060.000335
N252A252delGCT---11AY.1080.001103
N252A252SGctTct11AY.1090.00074
N252A252VgCtgTt11AY.1090.00074
N252A252SGctTct11AY.1100.000113
N252A252SGctTct11AY.1110.000183
N252A252TGctAct11AY.1130.000142
N252A252SGctTct11AY.1130.000142
N252A252AgcTgcC11AY.1140.000231
N252A252AgcTgcC11AY.1160.000287
N252A252SGctTct11AY.1180.000063
N252A252SGctTct11AY.120.000316
N252A252TGctAct11AY.1200.000037
N252A252VgCtgTt11AY.1200.000037
N252A252AgcTgcC11AY.130.000161
N252A252SGctTct11AY.160.00038
N252A252SGctTct11AY.220.002092
N252A252GgCtgGt11AY.230.00007
N252A252SGctTct11AY.23.10.000417
N252A252SGctTct11AY.240.000431
N252A252TGctAct11AY.250.000006
N252A252DgCtgAt11AY.250.000006
N252A252DgCtgAt11AY.260.000028
N252A252TGctAct11AY.290.000016
N252A252VgCtgTt11AY.29.10.000221
N252A252FGCtTTt11AY.30.00001
N252A252SGctTct11AY.3.10.000085
N252A252TGctAct11AY.3.10.000085
N252A252VgCtgTt11AY.300.000396
N252A252VgCtgTt11AY.320.000532
N252A252SGctTct11AY.340.000097
N252A252AgcTgcC11AY.380.000499
N252A252VgCtgTt11AY.380.000499
N252A252FGCtTTt11AY.40.000002
N252A252GgCtgGt11AY.40.000002
N252A252VgCtgTt11AY.4.10.000737
N252A252AgcTgcC11AY.4.20.000022
N252A252SGctTct11AY.4.40.000409
N252A252SGctTct11AY.420.00004
N252A252AgcTgcC11AY.430.000004
N252A252PGctCct11AY.440.000006
N252A252VgCtgTt11AY.450.000122
N252A252AgcTgcA11AY.460.000104
N252A252AgcTgcC11AY.46.20.000635
N252A252SGctTct11AY.46.30.000934
N252A252TGctAct11AY.46.40.000165
N252A252SGctTct11AY.46.40.000165
N252A252VgCtgTt11AY.46.60.000072
N252A252TGctAct11AY.470.000031
N252A252AgcTgcC11AY.50.000021
N252A252FGCtTTt11AY.50.000021
N252A252AgcTgcA11AY.5.30.000337
N252A252AgcTgcA11AY.5.40.000277
N252A252VgCtgTt11AY.5.40.000277
N252A252AgcTgcA11AY.500.000799
N252A252VgCtgTt11AY.540.000095
N252A252delGCT---11AY.540.000095
N252A252SGctTct11AY.540.000095
N252A252SGctTct11AY.550.000917
N252A252AgcTgcC11AY.60.000041
N252A252TGctAct11AY.60.000041
N252A252SGctTct11AY.60.000041
N252A252SGctTct11AY.650.000533
N252A252SGctTct11AY.670.000464
N252A252SGctTct11AY.70.000196
N252A252SGctTct11AY.700.000209
N252A252SGctTct11AY.740.000116
N252A252VgCtgTt11AY.75.10.00018
N252A252VgCtgTt11AY.820.001357
N252A252AgcTgcA11AY.840.000437
N252A252SGctTct11AY.850.000427
N252A252AgcTgcA11AY.850.000427
N252A252SGctTct11AY.870.000833
N252A252AgcTgcA11AY.890.004902
N252A252VgCtgTt11AY.9.10.000084
N252A252delGCT---11AY.9.20.000037
N252A252TGctAct11AY.9.20.000037
N252A252TGctAct11AY.910.00073
N252A252VgCtgTt11AY.910.00073
N252A252AgcTgcG11AY.990.001049
N252A252AgcTgcC11AY.99.20.000092
N252A252TGctAct11AY.99.20.000092
N252A252SGctTct11AY.99.20.000092
N252A252VgCtgTt11B0.000128
N252A252TGctAct11B0.000128
N252A252delGCT---11B.10.000009
N252A252PGctCct11B.10.000009
N252A252del2GCT--C11B.10.000009
N252A252del1gcTgc-11B.10.000009
N252A252KGCTAAG11B.1.10.000018
N252A252del1Gct-ct11B.1.10.000018
N252A252delGCT---11B.1.10.000018
N252A252PGctCct11B.1.10.000018
N252A252DgCtgAt11B.1.10.000018
N252A252NGCtAAt11B.1.10.000018
N252A252EgCTgAG11B.1.10.000018
N252A252SGctTct11B.1.1.100.001115
N252A252VgCtgTt11B.1.1.1890.001513
N252A252AgcTgcC11B.1.1.2140.000055
N252A252DgCtgAt11B.1.1.2200.001859
N252A252VgCtgTt11B.1.1.2220.000204
N252A252LGCtCTt11B.1.1.270.00565
N252A252VgCtgTt11B.1.1.2700.010309
N252A252AgcTgcC11B.1.1.280.000311
N252A252SGctTct11B.1.1.280.000311
N252A252TGctAct11B.1.1.2840.000107
N252A252SGctTct11B.1.1.2960.018182
N252A252delGCT---11B.1.1.3060.000438
N252A252TGctAct11B.1.1.3560.008547
N252A252AgcTgcC11B.1.1.3690.000446
N252A252PGctCct11B.1.1.370.000193
N252A252SGctTct11B.1.1.3970.002252
N252A252SGctTct11B.1.1.4090.002833
N252A252AgcTgcC11B.1.1.4330.001425
N252A252SGctTct11B.1.1.5070.008696
N252A252SGctTct11B.1.1.580.005376
N252A252PGcTCcG11B.1.1.70.000001
N252A252GgCTgGG11B.1.1.70.000001
N252A252AgcTgcC11B.1.1.700.000341
N252A252SGctTct11B.1.1.830.00271
N252A252VgCtgTt11B.1.110.30.000718
N252A252SGctTct11B.1.110.30.000718
N252A252VgCtgTt11B.1.1280.000635
N252A252SGctTct11B.1.130.002375
N252A252SGctTct11B.1.1390.000733
N252A252delGCT---11B.1.1470.000756
N252A252VgCtgTt11B.1.160.150.00495
N252A252SGctTct11B.1.160.260.002421
N252A252delGCT---11B.1.1770.000013
N252A252PGctCct11B.1.1770.000013
N252A252TGctAct11B.1.1770.000013
N252A252TGctAct11B.1.177.100.000878
N252A252delGCT---11B.1.177.440.000519
N252A252SGctTct11B.1.177.550.002331
N252A252SGctTct11B.1.177.570.000281
N252A252AgcTgcC11B.1.177.630.002703
N252A252VgCtgTt11B.1.177.630.002703
N252A252VgCtgTt11B.1.177.650.000665
N252A252SGctTct11B.1.177.750.001041
N252A252AgcTgcC11B.1.177.810.000189
N252A252delGCT---11B.1.177.830.001481
N252A252VgCtgTt11B.1.177.860.000183
N252A252del1Gct-ct11B.1.2060.000816
N252A252VgCtgTt11B.1.2140.003663
N252A252VgCtgTt11B.1.214.20.0006
N252A252AgcTgcC11B.1.230.006061
N252A252SGctTct11B.1.2360.002053
N252A252SGctTct11B.1.2370.004975
N252A252SGctTct11B.1.2400.000216
N252A252TGctAct11B.1.2430.00007
N252A252SGctTct11B.1.258.110.000396
N252A252AgcTgcC11B.1.2600.003344
N252A252SGctTct11B.1.2650.001271
N252A252delGCT---11B.1.2790.000514
N252A252SGctTct11B.1.2810.021739
N252A252AgcTgcC11B.1.2910.019231
N252A252AgcTgcC11B.1.30.002618
N252A252VgCtgTt11B.1.3110.000275
N252A252SGctTct11B.1.3110.000275
N252A252AgcTgcC11B.1.3380.008621
N252A252AgcTgcC11B.1.3500.002933
N252A252delGCT---11B.1.3510.00003
N252A252SGctTct11B.1.351.20.000303
N252A252VgCtgTt11B.1.36.180.00042
N252A252AgcTgcC11B.1.36.290.000517
N252A252AgcTgcG11B.1.36.310.001751
N252A252SGctTct11B.1.36.350.002604
N252A252SGctTct11B.1.36.70.004
N252A252del1Gct-ct11B.1.36.80.001
N252A252AgcTgcG11B.1.3670.000792
N252A252SGctTct11B.1.3670.000792
N252A252VgCtgTt11B.1.3690.000285
N252A252delGCT---11B.1.3690.000285
N252A252VgCtgTt11B.1.380.032258
N252A252AgcTgcC11B.1.4090.000781
N252A252SGctTct11B.1.4090.000781
N252A252delGCT---11B.1.4150.014286
N252A252VgCtgTt11B.1.4270.00005
N252A252AgcTgcC11B.1.4270.00005
N252A252VgCtgTt11B.1.4290.000024
N252A252delGCT---11B.1.4390.005917
N252A252SGctTct11B.1.4590.004082
N252A252AgcTgcC11B.1.4620.007246
N252A252SGctTct11B.1.4730.019231
N252A252VgCtgTt11B.1.5170.000427
N252A252SGctTct11B.1.5170.000427
N252A252SGctTct11B.1.5230.002451
N252A252SGctTct11B.1.5240.001406
N252A252VgCtgTt11B.1.5250.000113
N252A252AgcTgcC11B.1.5250.000113
N252A252SGctTct11B.1.5400.009709
N252A252SGctTct11B.1.5600.00463
N252A252AgcTgcC11B.1.5600.00463
N252A252SGctTct11B.1.5610.000397
N252A252SGctTct11B.1.5700.002941
N252A252delGCT---11B.1.5800.004065
N252A252AgcTgcC11B.1.5820.000491
N252A252AgcTgcA11B.1.5950.000261
N252A252SGctTct11B.1.6100.003546
N252A252VgCtgTt11B.1.617.10.000129
N252A252delGCT---11B.1.617.10.000129
N252A252delGCT---11B.1.617.20.000004
N252A252SGctTct11B.1.6200.000946
N252A252VgCtgTt11B.1.6200.000946
N252A252delGCT---11B.1.6210.000089
N252A252SGctTct11B.1.621.10.000506
N252A252YGCtTAt11B.1.6230.000536
N252A252DgCtgAt11B.1.6230.000536
N252A252SGctTct11B.1.6230.000536
N252A252SGctTct11B.1.6270.00202
N252A252VgCtgTt11B.1.6370.000073
N252A252VgCtgTt11B.1.9.40.006135
N252A252TGctAct11B.260.014706
N252A252VgCtgTt11B.390.002331
N252A252AgcTgcC11B.4.50.011905
N252A252AgcTgcC11B.400.000364
N252A252SGctTct11B.400.000364
N252A252SGctTct11C.10.002392
N252A252SGctTct11C.260.007353
N252A252SGctTct11C.370.000116
N252A252GgCtgGt11C.370.000116
N252A252VgCtgTt11D.20.000075
N252A252AgcTgcC11D.20.000075
N252A252TGctAct11D.20.000075
N252A252SGctTct11P.1.100.000269
N252A252VgCtgTt11P.1.100.000269
N252A252SGctTct11P.1.130.000898
N252A252AgcTgcC11P.1.150.000232
N252A252SGctTct11P.1.170.000162
N252A252VgCtgTt11P.1.170.000162
N252A252SGctTct11P.1.17.10.000875
N252A252AgcTgcC11P.20.000187
N252A252GgCtgGt11P.70.004367
N252A252AgcTgcC11Q.10.000126
N252A252delGCT---11Q.20.000613
N252A252AgcTgcG11Q.30.000145
N252A252AgcTgcA11Q.80.000165
N252A252VgCtgTt11Q.80.000165
N252A252SGctTct11Q.80.000165
N252A252SGctTct11U.10.012821

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.