CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
N | 235 | S235F | nonsyn | tCt | tTt | 1140372 | 1140362 | 0.999991 | 28976-28978 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
N | 235 | S235F | tCt | tTt | 1140362 | 1140372 | All | 0.218108 |
N | 235 | S235F | tCt | tTt | 1105564 | 1105569 | B.1.1.7 | 0.989726 |
N | 235 | S235F | tCt | tTt | 7855 | 7855 | Q.1 | 0.992294 |
N | 235 | S235F | tCt | tTt | 6869 | 6869 | Q.3 | 0.996229 |
N | 235 | S235F | tCt | tTt | 6034 | 6034 | Q.8 | 0.995053 |
N | 235 | S235F | tCt | tTt | 3390 | 3390 | B.1.1 | 0.061498 |
N | 235 | S235F | tCt | tTt | 2184 | 2184 | Q.4 | 0.993179 |
N | 235 | S235F | tCt | tTt | 1592 | 1592 | Q.2 | 0.976687 |
N | 235 | S235F | tCt | tTt | 1415 | 1417 | B.1 | 0.012961 |
N | 235 | S235F | tCt | tTt | 1287 | 1287 | B.1.139 | 0.943548 |
N | 235 | S235F | tCt | tTt | 1179 | 1179 | B.1.565 | 0.955429 |
N | 235 | S235F | tCt | tTt | 900 | 900 | Q.7 | 1 |
N | 235 | S235F | tCt | tTt | 151 | 151 | Q.6 | 1 |
N | 235 | S235F | tCt | tTt | 107 | 107 | B.1.170 | 0.461207 |
N | 235 | S235F | tCt | tTt | 89 | 89 | B.1.2 | 0.000784 |
N | 235 | S235F | tCt | tTt | 87 | 87 | B.1.177 | 0.001146 |
N | 235 | S235F | tCt | tTt | 76 | 76 | B.1.177.73 | 0.043035 |
N | 235 | S235F | tCt | tTt | 76 | 76 | B.1.617.2 | 0.000286 |
N | 235 | S235F | tCt | tTt | 59 | 59 | Q.5 | 1 |
N | 235 | S235F | tCt | tTt | 57 | 57 | P.1 | 0.000898 |
N | 235 | S235F | tCt | tTt | 56 | 56 | B.1.1.507 | 0.486957 |
N | 235 | S235F | tCt | tTt | 49 | 51 | B.1.221 | 0.003481 |
N | 235 | S235F | tCt | tTt | 49 | 49 | B.1.1.409 | 0.13881 |
N | 235 | S235F | tCt | tTt | 48 | 48 | B.1.526 | 0.001128 |
N | 235 | S235F | tCt | tTt | 46 | 46 | B.1.1.220 | 0.085502 |
N | 235 | S235F | tCt | tTt | 45 | 45 | XA | 1 |
N | 235 | S235F | tCt | tTt | 39 | 39 | B.1.351 | 0.001159 |
N | 235 | S235F | tCt | tTt | 35 | 35 | B.1.177.7 | 0.00577 |
N | 235 | S235F | tCt | tTt | 33 | 33 | AY.43 | 0.000146 |
N | 235 | S235F | tCt | tTt | 33 | 33 | B.1.1.312 | 0.063098 |
N | 235 | S235F | tCt | tTt | 31 | 31 | B.1.576 | 0.028105 |
N | 235 | S235F | tCt | tTt | 28 | 28 | B.1.596 | 0.00244 |
N | 235 | S235F | tCt | tTt | 26 | 26 | B | 0.003323 |
N | 235 | S235F | tCt | tTt | 26 | 26 | B.1.429 | 0.000612 |
N | 235 | S235F | tCt | tTt | 24 | 24 | B.1.160 | 0.000749 |
N | 235 | S235F | tCt | tTt | 24 | 24 | P.1.1 | 0.007624 |
N | 235 | S235F | tCt | tTt | 23 | 23 | B.1.1.161 | 0.081272 |
N | 235 | S235F | tCt | tTt | 22 | 22 | AY.44 | 0.000134 |
N | 235 | S235F | tCt | tTt | 22 | 22 | B.1.470 | 0.030899 |
N | 235 | S235F | tCt | tTt | 22 | 22 | B.1.533 | 0.211538 |
N | 235 | S235F | tCt | tTt | 21 | 21 | B.1.1.528 | 0.100962 |
N | 235 | S235F | tCt | tTt | 19 | 19 | B.1.1.519 | 0.000755 |
N | 235 | S235F | tCt | tTt | 18 | 18 | B.1.375 | 0.014754 |
N | 235 | S235F | tCt | tTt | 18 | 18 | B.1.378 | 0.123288 |
N | 235 | S235F | tCt | tTt | 14 | 14 | B.1.1.318 | 0.004225 |
N | 235 | S235F | tCt | tTt | 14 | 14 | B.1.617.1 | 0.001806 |
N | 235 | S235F | tCt | tTt | 14 | 14 | P.1.15 | 0.003253 |
N | 235 | S235F | tCt | tTt | 13 | 13 | AY.4 | 0.00002 |
N | 235 | S235F | tCt | tTt | 13 | 13 | B.1.525 | 0.001471 |
N | 235 | S235F | tCt | tTt | 12 | 12 | C.37 | 0.001393 |
N | 235 | S235F | tCt | tTt | 11 | 11 | B.1.36 | 0.001605 |
N | 235 | S235F | tCt | tTt | 11 | 11 | B.1.580 | 0.044715 |
N | 235 | S235F | tCt | tTt | 10 | 10 | 0.555556 | |
N | 235 | S235F | tCt | tTt | 10 | 10 | AY.103 | 0.000062 |
N | 235 | S235F | tCt | tTt | 9 | 9 | AY.26 | 0.000255 |
N | 235 | S235F | tCt | tTt | 9 | 9 | AY.3 | 0.00009 |
N | 235 | S235F | tCt | tTt | 9 | 9 | B.1.427 | 0.000454 |
N | 235 | S235F | tCt | tTt | 9 | 9 | C.36.3 | 0.005105 |
N | 235 | S235F | tCt | tTt | 9 | 9 | P.1.17 | 0.001456 |
N | 235 | S235F | tCt | tTt | 8 | 8 | P.1.12 | 0.003872 |
N | 235 | S235F | tCt | tTt | 7 | 7 | AY.30 | 0.00277 |
N | 235 | S235F | tCt | tTt | 7 | 7 | AY.39 | 0.000173 |
N | 235 | S235F | tCt | tTt | 7 | 7 | B.1.1.10 | 0.007804 |
N | 235 | S235F | tCt | tTt | 7 | 7 | B.1.1.294 | 0.008861 |
N | 235 | S235F | tCt | tTt | 7 | 7 | B.1.1.413 | 0.048276 |
N | 235 | S235F | tCt | tTt | 7 | 7 | B.1.258 | 0.000466 |
N | 235 | S235F | tCt | tTt | 7 | 7 | B.1.311 | 0.001922 |
N | 235 | S235F | tCt | tTt | 7 | 7 | B.1.595 | 0.001827 |
N | 235 | S235F | tCt | tTt | 6 | 6 | AY.118 | 0.000376 |
N | 235 | S235F | tCt | tTt | 6 | 6 | AY.25 | 0.000036 |
N | 235 | S235F | tCt | tTt | 6 | 6 | AY.68 | 0.001642 |
N | 235 | S235F | tCt | tTt | 6 | 6 | B.1.177.81 | 0.001136 |
N | 235 | S235F | tCt | tTt | 6 | 6 | B.1.258.17 | 0.000624 |
N | 235 | S235F | tCt | tTt | 6 | 6 | B.1.411 | 0.022222 |
N | 235 | S235F | tCt | tTt | 6 | 6 | B.1.623 | 0.003219 |
N | 235 | S235F | tCt | tTt | 5 | 5 | AY.4.2.1 | 0.000745 |
N | 235 | S235F | tCt | tTt | 5 | 5 | AY.42 | 0.000201 |
N | 235 | S235F | tCt | tTt | 5 | 5 | B.1.1.389 | 0.030303 |
N | 235 | S235F | tCt | tTt | 5 | 5 | B.1.1.39 | 0.002548 |
N | 235 | S235F | tCt | tTt | 5 | 5 | B.1.1.70 | 0.001705 |
N | 235 | S235F | tCt | tTt | 5 | 5 | B.1.206 | 0.004078 |
N | 235 | S235F | tCt | tTt | 4 | 4 | A | 0.001548 |
N | 235 | S235F | tCt | tTt | 4 | 4 | AY.102 | 0.000106 |
N | 235 | S235F | tCt | tTt | 4 | 4 | AY.23 | 0.000279 |
N | 235 | S235F | tCt | tTt | 4 | 4 | AY.33 | 0.000267 |
N | 235 | S235F | tCt | tTt | 4 | 4 | AY.36 | 0.000593 |
N | 235 | S235F | tCt | tTt | 4 | 4 | B.1.1.141 | 0.008048 |
N | 235 | S235F | tCt | tTt | 4 | 4 | B.1.1.28 | 0.001245 |
N | 235 | S235F | tCt | tTt | 4 | 4 | B.1.1.524 | 0.083333 |
N | 235 | S235F | tCt | tTt | 4 | 4 | B.1.157 | 0.01194 |
N | 235 | S235F | tCt | tTt | 4 | 4 | B.1.177.31 | 0.045977 |
N | 235 | S235F | tCt | tTt | 4 | 4 | B.1.177.86 | 0.000734 |
N | 235 | S235F | tCt | tTt | 4 | 4 | B.1.234 | 0.000528 |
N | 235 | S235F | tCt | tTt | 4 | 4 | B.1.260 | 0.013378 |
N | 235 | S235F | tCt | tTt | 4 | 4 | B.1.564 | 0.001704 |
N | 235 | S235F | tCt | tTt | 4 | 4 | C.39 | 0.075472 |
N | 235 | S235F | tCt | tTt | 4 | 4 | P.1.10.1 | 0.03252 |
N | 235 | S235F | tCt | tTt | 4 | 4 | R.1 | 0.00036 |
N | 235 | S235F | tCt | tTt | 3 | 3 | AY.29 | 0.000047 |
N | 235 | S235F | tCt | tTt | 3 | 3 | AY.46 | 0.000312 |
N | 235 | S235F | tCt | tTt | 3 | 3 | AY.47 | 0.000093 |
N | 235 | S235F | tCt | tTt | 3 | 3 | AY.54 | 0.000286 |
N | 235 | S235F | tCt | tTt | 3 | 3 | AY.75 | 0.000168 |
N | 235 | S235F | tCt | tTt | 3 | 3 | B.1.1.216 | 0.002671 |
N | 235 | S235F | tCt | tTt | 3 | 3 | B.1.1.306 | 0.001315 |
N | 235 | S235F | tCt | tTt | 3 | 3 | B.1.1.525 | 0.016393 |
N | 235 | S235F | tCt | tTt | 3 | 3 | B.1.177.12 | 0.000455 |
N | 235 | S235F | tCt | tTt | 3 | 3 | B.1.214 | 0.010989 |
N | 235 | S235F | tCt | tTt | 3 | 3 | B.1.243 | 0.000209 |
N | 235 | S235F | tCt | tTt | 3 | 3 | B.1.361 | 0.003866 |
N | 235 | S235F | tCt | tTt | 3 | 3 | B.1.438.1 | 0.000322 |
N | 235 | S235F | tCt | tTt | 3 | 3 | B.1.575 | 0.00091 |
N | 235 | S235F | tCt | tTt | 3 | 3 | B.1.609 | 0.001438 |
N | 235 | S235F | tCt | tTt | 3 | 3 | B.1.620 | 0.002838 |
N | 235 | S235F | tCt | tTt | 3 | 3 | P.1.13 | 0.002695 |
N | 235 | S235F | tCt | tTt | 3 | 3 | P.1.16 | 0.001122 |
N | 235 | S235F | tCt | tTt | 2 | 2 | A.1 | 0.000564 |
N | 235 | S235F | tCt | tTt | 2 | 2 | A.2.5 | 0.000998 |
N | 235 | S235F | tCt | tTt | 2 | 2 | AY.16 | 0.000759 |
N | 235 | S235F | tCt | tTt | 2 | 2 | AY.16.1 | 0.00094 |
N | 235 | S235F | tCt | tTt | 2 | 2 | AY.2 | 0.000712 |
N | 235 | S235F | tCt | tTt | 2 | 2 | AY.5 | 0.000041 |
N | 235 | S235F | tCt | tTt | 2 | 2 | AY.52 | 0.001629 |
N | 235 | S235F | tCt | tTt | 2 | 2 | AY.55 | 0.001835 |
N | 235 | S235F | tCt | tTt | 2 | 2 | AY.75.1 | 0.000361 |
N | 235 | S235F | tCt | tTt | 2 | 2 | AY.98.1 | 0.000097 |
N | 235 | S235F | tCt | tTt | 2 | 2 | AZ.3 | 0.00304 |
N | 235 | S235F | tCt | tTt | 2 | 2 | B.1.1.1 | 0.000653 |
N | 235 | S235F | tCt | tTt | 2 | 2 | B.1.1.142 | 0.035088 |
N | 235 | S235F | tCt | tTt | 2 | 2 | B.1.1.229 | 0.011494 |
N | 235 | S235F | tCt | tTt | 2 | 2 | B.1.1.25 | 0.001137 |
N | 235 | S235F | tCt | tTt | 2 | 2 | B.1.1.299 | 0.02439 |
N | 235 | S235F | tCt | tTt | 2 | 2 | B.1.1.315 | 0.016949 |
N | 235 | S235F | tCt | tTt | 2 | 2 | B.1.1.326 | 0.003521 |
N | 235 | S235F | tCt | tTt | 2 | 2 | B.1.1.34 | 0.026316 |
N | 235 | S235F | tCt | tTt | 2 | 2 | B.1.1.37 | 0.000386 |
N | 235 | S235F | tCt | tTt | 2 | 2 | B.1.1.374 | 0.004751 |
N | 235 | S235F | tCt | tTt | 2 | 2 | B.1.1.420 | 0.002012 |
N | 235 | S235F | tCt | tTt | 2 | 2 | B.1.1.523 | 0.003125 |
N | 235 | S235F | tCt | tTt | 2 | 2 | B.1.177.44 | 0.001038 |
N | 235 | S235F | tCt | tTt | 2 | 2 | B.1.214.2 | 0.001199 |
N | 235 | S235F | tCt | tTt | 2 | 2 | B.1.284 | 0.026316 |
N | 235 | S235F | tCt | tTt | 2 | 2 | B.1.349 | 0.00143 |
N | 235 | S235F | tCt | tTt | 2 | 2 | B.1.362 | 0.003082 |
N | 235 | S235F | tCt | tTt | 2 | 2 | B.1.456 | 0.006536 |
N | 235 | S235F | tCt | tTt | 2 | 2 | B.1.473 | 0.038462 |
N | 235 | S235F | tCt | tTt | 2 | 2 | B.1.551 | 0.002581 |
N | 235 | S235F | tCt | tTt | 2 | 2 | B.1.619 | 0.001742 |
N | 235 | S235F | tCt | tTt | 2 | 2 | B.1.627 | 0.00404 |
N | 235 | S235F | tCt | tTt | 2 | 2 | B.1.628 | 0.000705 |
N | 235 | S235F | tCt | tTt | 2 | 2 | B.1.636 | 0.013423 |
N | 235 | S235F | tCt | tTt | 2 | 2 | B.1.637 | 0.000146 |
N | 235 | S235F | tCt | tTt | 2 | 2 | C.16 | 0.002121 |
N | 235 | S235F | tCt | tTt | 2 | 2 | P.1.10 | 0.000539 |
N | 235 | S235F | tCt | tTt | 2 | 2 | P.1.14 | 0.000096 |
N | 235 | S235F | tCt | tTt | 1 | 1 | A.2.5.2 | 0.001572 |
N | 235 | S235F | tCt | tTt | 1 | 1 | A.23.1 | 0.000704 |
N | 235 | S235F | tCt | tTt | 1 | 1 | A.27 | 0.001656 |
N | 235 | S235F | tCt | tTt | 1 | 1 | A.7 | 0.055556 |
N | 235 | S235F | tCt | tTt | 1 | 1 | AY.100 | 0.000046 |
N | 235 | S235F | tCt | tTt | 1 | 1 | AY.110 | 0.000113 |
N | 235 | S235F | tCt | tTt | 1 | 1 | AY.116 | 0.000287 |
N | 235 | S235F | tCt | tTt | 1 | 1 | AY.119 | 0.000035 |
N | 235 | S235F | tCt | tTt | 1 | 1 | AY.121 | 0.000135 |
N | 235 | S235F | tCt | tTt | 1 | 1 | AY.19 | 0.00114 |
N | 235 | S235F | tCt | tTt | 1 | 1 | AY.20 | 0.000039 |
N | 235 | S235F | tCt | tTt | 1 | 1 | AY.3.1 | 0.000085 |
N | 235 | S235F | tCt | tTt | 1 | 1 | AY.34 | 0.000097 |
N | 235 | S235F | tCt | tTt | 1 | 1 | AY.34.1 | 0.00051 |
N | 235 | S235F | tCt | tTt | 1 | 1 | AY.4.5 | 0.000107 |
N | 235 | S235F | tCt | tTt | 1 | 1 | AY.40 | 0.000964 |
N | 235 | S235F | tCt | tTt | 1 | 1 | AY.45 | 0.000122 |
N | 235 | S235F | tCt | tTt | 1 | 1 | AY.5.4 | 0.000277 |
N | 235 | S235F | tCt | tTt | 1 | 1 | AY.53 | 0.000288 |
N | 235 | S235F | tCt | tTt | 1 | 1 | AY.59 | 0.00053 |
N | 235 | S235F | tCt | tTt | 1 | 1 | AY.61 | 0.000105 |
N | 235 | S235F | tCt | tTt | 1 | 1 | AY.65 | 0.000533 |
N | 235 | S235F | tCt | tTt | 1 | 1 | AY.77 | 0.001127 |
N | 235 | S235F | tCt | tTt | 1 | 1 | AY.84 | 0.000437 |
N | 235 | S235F | tCt | tTt | 1 | 1 | AY.9.2 | 0.000037 |
N | 235 | S235F | tCt | tTt | 1 | 1 | AY.95 | 0.000761 |
N | 235 | S235F | tCt | tTt | 1 | 1 | AY.96 | 0.002075 |
N | 235 | S235F | tCt | tTt | 1 | 1 | AY.98 | 0.000079 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.135 | 0.004695 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.148 | 0.008772 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.153 | 0.001095 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.162 | 0.029412 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.171 | 0.003676 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.174 | 0.003378 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.231 | 0.003096 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.236 | 0.006897 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.237 | 0.005405 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.241 | 0.00207 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.254 | 0.011236 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.265 | 0.003155 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.27 | 0.00565 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.275 | 0.011236 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.277 | 0.000759 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.291 | 0.000742 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.301 | 0.001179 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.317 | 0.000412 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.343 | 0.020833 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.356 | 0.008547 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.365 | 0.005587 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.368 | 0.003086 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.370 | 0.012658 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.372 | 0.000689 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.4 | 0.002976 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.406 | 0.006494 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.416 | 0.000905 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.437 | 0.010417 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.440 | 0.011765 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.462 | 0.008621 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.464 | 0.001473 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.50 | 0.000679 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.51 | 0.001718 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.526 | 0.003546 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.54 | 0.003021 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.55 | 0.012987 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.56 | 0.017857 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.61 | 0.008772 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.63 | 0.000386 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.83 | 0.00271 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.89 | 0.006061 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.1.99 | 0.02381 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.110.3 | 0.000718 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.149 | 0.003425 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.160.15 | 0.00495 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.160.7 | 0.002079 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.177.19 | 0.001431 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.177.35 | 0.000691 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.177.4 | 0.000211 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.177.41 | 0.0025 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.177.51 | 0.004566 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.177.52 | 0.001757 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.177.53 | 0.002392 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.177.54 | 0.000606 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.177.58 | 0.001332 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.177.6 | 0.000977 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.177.67 | 0.007634 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.177.69 | 0.001484 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.177.77 | 0.000726 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.177.8 | 0.000752 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.210 | 0.002132 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.218 | 0.005155 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.237 | 0.004975 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.258.14 | 0.00098 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.301 | 0.005917 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.351.2 | 0.000303 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.36.10 | 0.004785 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.36.18 | 0.00042 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.36.2 | 0.010753 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.36.31 | 0.001751 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.36.33 | 0.007576 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.36.38 | 0.001642 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.367 | 0.000792 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.369 | 0.000285 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.389 | 0.001002 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.396 | 0.000706 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.397 | 0.004854 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.398 | 0.002976 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.415.1 | 0.007576 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.416 | 0.001269 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.416.1 | 0.001563 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.432 | 0.011236 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.433 | 0.003195 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.462 | 0.007246 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.466.1 | 0.007194 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.485 | 0.014925 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.505 | 0.004386 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.517 | 0.000427 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.524 | 0.001406 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.530 | 0.007143 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.561 | 0.000397 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.599 | 0.00365 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.617.3 | 0.002985 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.621 | 0.000089 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.625 | 0.002353 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.634 | 0.003425 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.1.94 | 0.027027 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.11 | 0.005128 |
N | 235 | S235F | tCt | tTt | 1 | 1 | B.4 | 0.002208 |
N | 235 | S235F | tCt | tTt | 1 | 1 | C.17 | 0.055556 |
N | 235 | S235F | tCt | tTt | 1 | 1 | C.37.1 | 0.002618 |
N | 235 | S235F | tCt | tTt | 1 | 1 | C.38 | 0.008065 |
N | 235 | S235F | tCt | tTt | 1 | 1 | Y.1 | 0.012821 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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