CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
N | 234 | M234I | nonsyn | atG | atT | 157953 | 73337 | 0.464296 | 28973-28975 | |
N | 234 | M234I | nonsyn | atG | atA | 157953 | 46241 | 0.292752 | 28973-28975 | |
N | 234 | M234I | nonsyn | atG | atC | 157953 | 38375 | 0.242952 | 28973-28975 | |
N | 234 | M234V | nonsyn | Atg | Gtg | 600 | 595 | 0.991667 | 28973-28975 | |
N | 234 | M234V | nonsyn | AtG | GtA | 600 | 3 | 0.005 | 28973-28975 | |
N | 234 | M234V | nonsyn | AtG | GtT | 600 | 1 | 0.00166667 | 28973-28975 | |
N | 234 | M234V | nonsyn | AtG | GtC | 600 | 1 | 0.00166667 | 28973-28975 | |
N | 234 | M234L | nonsyn | Atg | Ttg | 165 | 120 | 0.727273 | 28973-28975 | |
N | 234 | M234L | nonsyn | Atg | Ctg | 165 | 38 | 0.230303 | 28973-28975 | |
N | 234 | M234L | nonsyn | AtG | TtA | 165 | 3 | 0.0181818 | 28973-28975 | |
N | 234 | M234L | nonsyn | AtG | CtC | 165 | 2 | 0.0121212 | 28973-28975 | |
N | 234 | M234L | nonsyn | AtG | CtT | 165 | 2 | 0.0121212 | 28973-28975 | |
N | 234 | M234T | nonsyn | aTg | aCg | 97 | 96 | 0.989691 | 28973-28975 | |
N | 234 | M234T | nonsyn | aTG | aCC | 97 | 1 | 0.0103093 | 28973-28975 | |
N | 234 | M234R | nonsyn | aTg | aGg | 52 | 52 | 1 | 28973-28975 | |
N | 234 | M234del | del | ATG | --- | 41 | 41 | 1 | 28973-28975 | |
N | 234 | M234K | nonsyn | aTg | aAg | 23 | 21 | 0.913043 | 28973-28975 | |
N | 234 | M234K | nonsyn | aTG | aAA | 23 | 2 | 0.0869565 | 28973-28975 | |
N | 234 | M234F | nonsyn | AtG | TtT | 6 | 6 | 1 | 28973-28975 | |
N | 234 | M234del2 | del | ATg | --g | 5 | 3 | 0.6 | 28973-28975 | |
N | 234 | M234del2 | del | aTG | a-- | 5 | 2 | 0.4 | 28973-28975 | |
N | 234 | M234N | nonsyn | aTG | aAT | 4 | 4 | 1 | 28973-28975 | |
N | 234 | M234del1 | del | atG | at- | 3 | 2 | 0.666667 | 28973-28975 | |
N | 234 | M234del1 | del | AtG | -tC | 3 | 1 | 0.333333 | 28973-28975 | |
N | 234 | M234H | nonsyn | ATG | CAT | 2 | 2 | 1 | 28973-28975 | |
N | 234 | M234S | nonsyn | aTG | aGT | 1 | 1 | 1 | 28973-28975 | |
N | 234 | M234Q | nonsyn | ATg | CAg | 1 | 1 | 1 | 28973-28975 | |
N | 234 | M234E | nonsyn | ATg | GAg | 1 | 1 | 1 | 28973-28975 | |
N | 234 | M234G | nonsyn | ATG | GGT | 1 | 1 | 1 | 28973-28975 | |
N | 234 | M234A | nonsyn | ATG | GCT | 1 | 1 | 1 | 28973-28975 | |
N | 234 | M234X | nonsyn | ATg | TAg | 1 | 1 | 1 | 28973-28975 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
N | 234 | M234I | atG | atT | 73337 | 157953 | All | 0.014027 |
N | 234 | M234I | atG | atA | 46241 | 157953 | All | 0.008844 |
N | 234 | M234I | atG | atC | 38375 | 157953 | All | 0.00734 |
N | 234 | M234I | atG | atC | 29233 | 29464 | B.1.160 | 0.911708 |
N | 234 | M234I | atG | atT | 225 | 29464 | B.1.160 | 0.007017 |
N | 234 | M234I | atG | atA | 6 | 29464 | B.1.160 | 0.000187 |
N | 234 | M234I | atG | atA | 28845 | 28849 | B.1.526 | 0.677988 |
N | 234 | M234I | atG | atT | 4 | 28849 | B.1.526 | 0.000094 |
N | 234 | M234I | atG | atT | 18030 | 18030 | B.1.1.214 | 0.999889 |
N | 234 | M234I | atG | atT | 17725 | 17726 | B.1.429 | 0.417049 |
N | 234 | M234I | atG | atA | 1 | 17726 | B.1.429 | 0.000024 |
N | 234 | M234I | atG | atA | 13558 | 13559 | B.1.637 | 0.99072 |
N | 234 | M234I | atG | atT | 1 | 13559 | B.1.637 | 0.000073 |
N | 234 | M234I | atG | atT | 9282 | 9282 | B.1.438.1 | 0.995602 |
N | 234 | M234I | atG | atT | 5445 | 5446 | B.1.258.17 | 0.566126 |
N | 234 | M234I | atG | atC | 1 | 5446 | B.1.258.17 | 0.000104 |
N | 234 | M234I | atG | atT | 5256 | 5256 | P.2 | 0.980963 |
N | 234 | M234I | atG | atT | 1311 | 2555 | B.1 | 0.012008 |
N | 234 | M234I | atG | atA | 1061 | 2555 | B.1 | 0.009718 |
N | 234 | M234I | atG | atC | 183 | 2555 | B.1 | 0.001676 |
N | 234 | M234I | atG | atT | 2462 | 2477 | B.1.561 | 0.977372 |
N | 234 | M234I | atG | atC | 11 | 2477 | B.1.561 | 0.004367 |
N | 234 | M234I | atG | atA | 4 | 2477 | B.1.561 | 0.001588 |
N | 234 | M234I | atG | atT | 1947 | 1947 | A.2.5 | 0.971557 |
N | 234 | M234I | atG | atA | 1720 | 1729 | B.1.623 | 0.922747 |
N | 234 | M234I | atG | atT | 9 | 1729 | B.1.623 | 0.004828 |
N | 234 | M234I | atG | atT | 1352 | 1386 | B.1.1 | 0.024527 |
N | 234 | M234I | atG | atA | 26 | 1386 | B.1.1 | 0.000472 |
N | 234 | M234I | atG | atC | 8 | 1386 | B.1.1 | 0.000145 |
N | 234 | M234I | atG | atC | 1327 | 1356 | AY.25 | 0.007982 |
N | 234 | M234I | atG | atT | 21 | 1356 | AY.25 | 0.000126 |
N | 234 | M234I | atG | atA | 8 | 1356 | AY.25 | 0.000048 |
N | 234 | M234I | atG | atT | 1192 | 1192 | AZ.2 | 0.978654 |
N | 234 | M234I | atG | atT | 1076 | 1076 | B.1.588 | 0.979072 |
N | 234 | M234I | atG | atC | 1047 | 1048 | B.1.160.16 | 0.973048 |
N | 234 | M234I | atG | atT | 1 | 1048 | B.1.160.16 | 0.000929 |
N | 234 | M234I | atG | atC | 775 | 775 | B.1.160.8 | 0.998711 |
N | 234 | M234I | atG | atT | 629 | 629 | B.1.1.486 | 0.992114 |
N | 234 | M234I | atG | atT | 621 | 621 | A.2.5.2 | 0.976415 |
N | 234 | M234V | Atg | Gtg | 595 | 600 | All | 0.000114 |
N | 234 | M234V | AtG | GtA | 3 | 600 | All | 0.000001 |
N | 234 | M234V | AtG | GtT | 1 | 600 | All | 0 |
N | 234 | M234V | AtG | GtC | 1 | 600 | All | 0 |
N | 234 | M234I | atG | atC | 588 | 588 | B.1.160.17 | 1 |
N | 234 | M234I | atG | atC | 480 | 480 | B.1.160.7 | 0.997921 |
N | 234 | M234I | atG | atT | 421 | 466 | B.1.1.7 | 0.000377 |
N | 234 | M234I | atG | atA | 36 | 466 | B.1.1.7 | 0.000032 |
N | 234 | M234I | atG | atC | 9 | 466 | B.1.1.7 | 0.000008 |
N | 234 | M234I | atG | atC | 465 | 465 | B.1.160.14 | 0.985169 |
N | 234 | M234I | atG | atT | 463 | 463 | B.1.36.21 | 1 |
N | 234 | M234I | atG | atT | 396 | 425 | B.1.609 | 0.189837 |
N | 234 | M234I | atG | atC | 24 | 425 | B.1.609 | 0.011505 |
N | 234 | M234I | atG | atA | 5 | 425 | B.1.609 | 0.002397 |
N | 234 | M234I | atG | atT | 403 | 413 | B.1.625 | 0.948235 |
N | 234 | M234I | atG | atA | 10 | 413 | B.1.625 | 0.023529 |
N | 234 | M234I | atG | atC | 407 | 407 | B.1.160.26 | 0.985472 |
N | 234 | M234I | atG | atT | 400 | 407 | B.1.523 | 0.980392 |
N | 234 | M234I | atG | atC | 7 | 407 | B.1.523 | 0.017157 |
N | 234 | M234I | atG | atT | 400 | 400 | B.1.1.397 | 0.900901 |
N | 234 | M234I | atG | atC | 334 | 334 | B.1.160.28 | 0.976608 |
N | 234 | M234I | atG | atA | 281 | 316 | AY.44 | 0.00171 |
N | 234 | M234I | atG | atT | 33 | 316 | AY.44 | 0.000201 |
N | 234 | M234I | atG | atC | 2 | 316 | AY.44 | 0.000012 |
N | 234 | M234I | atG | atT | 222 | 278 | AY.4 | 0.000346 |
N | 234 | M234I | atG | atC | 38 | 278 | AY.4 | 0.000059 |
N | 234 | M234I | atG | atA | 18 | 278 | AY.4 | 0.000028 |
N | 234 | M234I | atG | atT | 133 | 255 | B.1.258 | 0.008851 |
N | 234 | M234I | atG | atA | 117 | 255 | B.1.258 | 0.007786 |
N | 234 | M234I | atG | atC | 5 | 255 | B.1.258 | 0.000333 |
N | 234 | M234I | atG | atT | 231 | 235 | B.1.618 | 0.931452 |
N | 234 | M234I | atG | atA | 4 | 235 | B.1.618 | 0.016129 |
N | 234 | M234I | atG | atC | 233 | 233 | B.1.160.29 | 0.983122 |
N | 234 | M234I | atG | atT | 225 | 225 | B.1.1.222 | 0.0459 |
N | 234 | M234I | atG | atC | 225 | 225 | B.1.160.24 | 0.995575 |
N | 234 | M234I | atG | atC | 225 | 225 | B.1.160.33 | 0.995575 |
N | 234 | M234I | atG | atT | 189 | 224 | B.1.2 | 0.001664 |
N | 234 | M234I | atG | atA | 31 | 224 | B.1.2 | 0.000273 |
N | 234 | M234I | atG | atC | 4 | 224 | B.1.2 | 0.000035 |
N | 234 | M234I | atG | atT | 220 | 220 | B.1.349 | 0.157255 |
N | 234 | M234I | atG | atT | 212 | 215 | B.1.427 | 0.010705 |
N | 234 | M234I | atG | atA | 3 | 215 | B.1.427 | 0.000151 |
N | 234 | M234I | atG | atC | 206 | 206 | B.1.160.23 | 0.995169 |
N | 234 | M234I | atG | atT | 205 | 205 | A.2.5.1 | 0.985577 |
N | 234 | M234I | atG | atC | 198 | 198 | B.1.160.30 | 0.589286 |
N | 234 | M234I | atG | atC | 195 | 196 | B.1.160.15 | 0.965347 |
N | 234 | M234I | atG | atT | 1 | 196 | B.1.160.15 | 0.00495 |
N | 234 | M234I | atG | atT | 126 | 193 | B.1.617.2 | 0.000474 |
N | 234 | M234I | atG | atA | 56 | 193 | B.1.617.2 | 0.000211 |
N | 234 | M234I | atG | atC | 11 | 193 | B.1.617.2 | 0.000041 |
N | 234 | M234I | atG | atC | 186 | 186 | B.1.160.32 | 0.798283 |
N | 234 | M234I | atG | atC | 174 | 174 | B.1.160.11 | 0.994286 |
N | 234 | M234L | Atg | Ttg | 120 | 165 | All | 0.000023 |
N | 234 | M234L | Atg | Ctg | 38 | 165 | All | 0.000007 |
N | 234 | M234L | AtG | TtA | 3 | 165 | All | 0.000001 |
N | 234 | M234L | AtG | CtT | 2 | 165 | All | 0 |
N | 234 | M234L | AtG | CtC | 2 | 165 | All | 0 |
N | 234 | M234I | atG | atC | 154 | 154 | B.1.160.12 | 0.987179 |
N | 234 | M234V | Atg | Gtg | 148 | 148 | B.1.1.7 | 0.000132 |
N | 234 | M234I | atG | atC | 146 | 146 | B.1.160.22 | 0.986486 |
N | 234 | M234I | atG | atA | 117 | 139 | B.1.36 | 0.01707 |
N | 234 | M234I | atG | atT | 18 | 139 | B.1.36 | 0.002626 |
N | 234 | M234I | atG | atC | 4 | 139 | B.1.36 | 0.000584 |
N | 234 | M234I | atG | atT | 139 | 139 | C.23 | 0.80814 |
N | 234 | M234I | atG | atC | 138 | 138 | B.1.160.9 | 0.992806 |
N | 234 | M234I | atG | atC | 135 | 135 | B.1.160.18 | 0.985401 |
N | 234 | M234I | atG | atC | 124 | 124 | B.1.160.31 | 1 |
N | 234 | M234I | atG | atT | 122 | 124 | B.1.596 | 0.010631 |
N | 234 | M234I | atG | atA | 2 | 124 | B.1.596 | 0.000174 |
N | 234 | M234I | atG | atT | 123 | 123 | AZ.2.1 | 1 |
N | 234 | M234I | atG | atC | 121 | 121 | AB.1 | 0.991803 |
N | 234 | M234I | atG | atC | 114 | 114 | B.1.160.10 | 0.919355 |
N | 234 | M234V | Atg | Gtg | 105 | 105 | AY.44 | 0.000639 |
N | 234 | M234T | aTg | aCg | 96 | 97 | All | 0.000018 |
N | 234 | M234T | aTG | aCC | 1 | 97 | All | 0 |
N | 234 | M234I | atG | atT | 96 | 96 | A.2.5.3 | 0.989691 |
N | 234 | M234I | atG | atC | 90 | 90 | B.1.160.25 | 1 |
N | 234 | M234I | atG | atT | 60 | 85 | P.1 | 0.000945 |
N | 234 | M234I | atG | atC | 18 | 85 | P.1 | 0.000284 |
N | 234 | M234I | atG | atA | 7 | 85 | P.1 | 0.00011 |
N | 234 | M234I | atG | atC | 81 | 82 | B.1.160.20 | 0.723214 |
N | 234 | M234I | atG | atT | 1 | 82 | B.1.160.20 | 0.008929 |
N | 234 | M234I | atG | atT | 72 | 72 | B.1.1.28 | 0.022409 |
N | 234 | M234I | atG | atT | 71 | 71 | AY.34 | 0.006885 |
N | 234 | M234I | atG | atT | 69 | 70 | B.1.1.50 | 0.046843 |
N | 234 | M234I | atG | atC | 1 | 70 | B.1.1.50 | 0.000679 |
N | 234 | M234I | atG | atC | 57 | 68 | B.1.177 | 0.000751 |
N | 234 | M234I | atG | atT | 11 | 68 | B.1.177 | 0.000145 |
N | 234 | M234I | atG | atT | 67 | 67 | B.1.438 | 0.437908 |
N | 234 | M234I | atG | atT | 55 | 66 | AY.26 | 0.001557 |
N | 234 | M234I | atG | atC | 11 | 66 | AY.26 | 0.000311 |
N | 234 | M234I | atG | atC | 53 | 66 | B.1.221 | 0.003765 |
N | 234 | M234I | atG | atT | 11 | 66 | B.1.221 | 0.000781 |
N | 234 | M234I | atG | atA | 2 | 66 | B.1.221 | 0.000142 |
N | 234 | M234I | atG | atC | 65 | 65 | B.1.160.27 | 0.984848 |
N | 234 | M234V | Atg | Gtg | 64 | 64 | B.1.177.82 | 0.030549 |
N | 234 | M234I | atG | atT | 55 | 57 | B.1.1.318 | 0.016596 |
N | 234 | M234I | atG | atA | 2 | 57 | B.1.1.318 | 0.000604 |
N | 234 | M234I | atG | atT | 56 | 57 | B.1.595 | 0.014614 |
N | 234 | M234I | atG | atA | 1 | 57 | B.1.595 | 0.000261 |
N | 234 | M234I | atG | atT | 53 | 56 | AY.103 | 0.000329 |
N | 234 | M234I | atG | atA | 2 | 56 | AY.103 | 0.000012 |
N | 234 | M234I | atG | atC | 1 | 56 | AY.103 | 0.000006 |
N | 234 | M234R | aTg | aGg | 52 | 52 | All | 0.00001 |
N | 234 | M234I | atG | atT | 52 | 52 | B.1.438.2 | 1 |
N | 234 | M234I | atG | atT | 50 | 50 | B.1.429.1 | 0.60241 |
N | 234 | M234I | atG | atC | 45 | 49 | B.1.1.39 | 0.022936 |
N | 234 | M234I | atG | atT | 4 | 49 | B.1.1.39 | 0.002039 |
N | 234 | M234I | atG | atC | 49 | 49 | B.1.160.21 | 1 |
N | 234 | M234I | atG | atT | 48 | 49 | B.1.460 | 0.857143 |
N | 234 | M234I | atG | atC | 1 | 49 | B.1.460 | 0.017857 |
N | 234 | M234I | atG | atT | 45 | 46 | AY.3 | 0.000448 |
N | 234 | M234I | atG | atC | 1 | 46 | AY.3 | 0.00001 |
N | 234 | M234R | aTg | aGg | 46 | 46 | AY.4 | 0.000072 |
N | 234 | M234del | ATG | --- | 41 | 41 | All | 0.000008 |
N | 234 | M234L | Atg | Ttg | 23 | 41 | B.1 | 0.000211 |
N | 234 | M234L | Atg | Ctg | 18 | 41 | B.1 | 0.000165 |
N | 234 | M234V | Atg | Gtg | 40 | 40 | B.1.617.2 | 0.000151 |
N | 234 | M234I | atG | atA | 39 | 39 | B.1.1.351 | 0.108939 |
N | 234 | M234I | atG | atT | 38 | 38 | B.1.478 | 0.447059 |
N | 234 | M234I | atG | atT | 14 | 37 | B | 0.001789 |
N | 234 | M234I | atG | atA | 14 | 37 | B | 0.001789 |
N | 234 | M234I | atG | atC | 9 | 37 | B | 0.00115 |
N | 234 | M234I | atG | atT | 34 | 37 | B.1.1.519 | 0.00135 |
N | 234 | M234I | atG | atA | 3 | 37 | B.1.1.519 | 0.000119 |
N | 234 | M234I | atG | atC | 36 | 36 | B.1.160.13 | 1 |
N | 234 | M234I | atG | atA | 18 | 35 | B.1.177.73 | 0.010193 |
N | 234 | M234I | atG | atC | 12 | 35 | B.1.177.73 | 0.006795 |
N | 234 | M234I | atG | atT | 5 | 35 | B.1.177.73 | 0.002831 |
N | 234 | M234V | Atg | Gtg | 34 | 34 | AY.4.2 | 0.000737 |
N | 234 | M234I | atG | atT | 33 | 34 | B.1.585 | 0.916667 |
N | 234 | M234I | atG | atA | 1 | 34 | B.1.585 | 0.027778 |
N | 234 | M234I | atG | atT | 21 | 33 | B.1.111 | 0.024677 |
N | 234 | M234I | atG | atA | 12 | 33 | B.1.111 | 0.014101 |
N | 234 | M234I | atG | atA | 33 | 33 | B.1.346 | 0.04325 |
N | 234 | M234I | atG | atT | 24 | 30 | AY.43 | 0.000106 |
N | 234 | M234I | atG | atC | 5 | 30 | AY.43 | 0.000022 |
N | 234 | M234I | atG | atA | 1 | 30 | AY.43 | 0.000004 |
N | 234 | M234I | atG | atC | 30 | 30 | B.1.177.31 | 0.344828 |
N | 234 | M234I | atG | atC | 30 | 30 | B.1.177.44 | 0.015568 |
N | 234 | M234I | atG | atT | 30 | 30 | B.1.239 | 0.03663 |
N | 234 | M234I | atG | atT | 30 | 30 | B.1.328 | 0.9375 |
N | 234 | M234V | Atg | Gtg | 29 | 29 | AY.46.6 | 0.002094 |
N | 234 | M234I | atG | atT | 28 | 28 | AY.13 | 0.004507 |
N | 234 | M234I | atG | atC | 28 | 28 | B.1.160.19 | 1 |
N | 234 | M234I | atG | atA | 28 | 28 | B.1.324 | 0.044944 |
N | 234 | M234I | atG | atT | 22 | 27 | B.1.311 | 0.006041 |
N | 234 | M234I | atG | atA | 5 | 27 | B.1.311 | 0.001373 |
N | 234 | M234I | atG | atT | 26 | 26 | B.1.1.306 | 0.011399 |
N | 234 | M234I | atG | atC | 26 | 26 | B.1.1.445 | 0.962963 |
N | 234 | M234I | atG | atT | 26 | 26 | B.1.588.1 | 1 |
N | 234 | M234I | atG | atC | 23 | 25 | B.1.1.265 | 0.072555 |
N | 234 | M234I | atG | atA | 1 | 25 | B.1.1.265 | 0.003155 |
N | 234 | M234I | atG | atT | 1 | 25 | B.1.1.265 | 0.003155 |
N | 234 | M234I | atG | atT | 25 | 25 | B.1.459 | 0.102041 |
N | 234 | M234K | aTg | aAg | 21 | 23 | All | 0.000004 |
N | 234 | M234K | aTG | aAA | 2 | 23 | All | 0 |
N | 234 | M234I | atG | atA | 15 | 22 | B.1.1.416 | 0.013575 |
N | 234 | M234I | atG | atT | 7 | 22 | B.1.1.416 | 0.006335 |
N | 234 | M234I | atG | atT | 15 | 22 | B.1.367 | 0.011886 |
N | 234 | M234I | atG | atA | 7 | 22 | B.1.367 | 0.005547 |
N | 234 | M234V | Atg | Gtg | 21 | 21 | AY.118 | 0.001316 |
N | 234 | M234V | Atg | Gtg | 21 | 21 | AY.54 | 0.002002 |
N | 234 | M234I | atG | atC | 21 | 21 | AY.64 | 0.0125 |
N | 234 | M234I | atG | atT | 21 | 21 | B.1.1.203 | 0.355932 |
N | 234 | M234I | atG | atA | 18 | 21 | B.1.177.7 | 0.002967 |
N | 234 | M234I | atG | atT | 2 | 21 | B.1.177.7 | 0.00033 |
N | 234 | M234I | atG | atC | 1 | 21 | B.1.177.7 | 0.000165 |
N | 234 | M234I | atG | atC | 20 | 21 | B.1.258.11 | 0.007927 |
N | 234 | M234I | atG | atT | 1 | 21 | B.1.258.11 | 0.000396 |
N | 234 | M234I | atG | atT | 20 | 21 | B.1.582 | 0.009814 |
N | 234 | M234I | atG | atC | 1 | 21 | B.1.582 | 0.000491 |
N | 234 | M234T | aTg | aCg | 20 | 20 | B.1.617.2 | 0.000075 |
N | 234 | M234I | atG | atA | 17 | 18 | AY.42 | 0.000684 |
N | 234 | M234I | atG | atT | 1 | 18 | AY.42 | 0.00004 |
N | 234 | M234I | atG | atT | 14 | 18 | B.1.567 | 0.046667 |
N | 234 | M234I | atG | atA | 3 | 18 | B.1.567 | 0.01 |
N | 234 | M234I | atG | atC | 1 | 18 | B.1.567 | 0.003333 |
N | 234 | M234T | aTg | aCg | 16 | 16 | AY.4 | 0.000025 |
N | 234 | M234I | atG | atT | 16 | 16 | B.1.1.277 | 0.01214 |
N | 234 | M234I | atG | atT | 15 | 15 | B.1.633 | 0.625 |
N | 234 | M234I | atG | atT | 11 | 14 | AY.102 | 0.000292 |
N | 234 | M234I | atG | atA | 2 | 14 | AY.102 | 0.000053 |
N | 234 | M234I | atG | atC | 1 | 14 | AY.102 | 0.000027 |
N | 234 | M234I | atG | atT | 12 | 13 | AY.75 | 0.000672 |
N | 234 | M234I | atG | atA | 1 | 13 | AY.75 | 0.000056 |
N | 234 | M234L | Atg | Ttg | 13 | 13 | B.1.1.306 | 0.005699 |
N | 234 | M234I | atG | atT | 13 | 13 | B.1.438.3 | 1 |
N | 234 | M234I | atG | atA | 13 | 13 | B.1.574 | 0.027957 |
N | 234 | M234L | Atg | Ttg | 13 | 13 | B.1.617.2 | 0.000049 |
N | 234 | M234I | atG | atT | 12 | 12 | AY.29 | 0.000189 |
N | 234 | M234V | Atg | Gtg | 12 | 12 | B.1.177.38 | 0.125 |
N | 234 | M234I | atG | atT | 10 | 12 | B.1.351 | 0.000297 |
N | 234 | M234I | atG | atA | 1 | 12 | B.1.351 | 0.00003 |
N | 234 | M234I | atG | atC | 1 | 12 | B.1.351 | 0.00003 |
N | 234 | M234I | atG | atT | 8 | 12 | B.1.36.29 | 0.004139 |
N | 234 | M234I | atG | atC | 3 | 12 | B.1.36.29 | 0.001552 |
N | 234 | M234I | atG | atA | 1 | 12 | B.1.36.29 | 0.000517 |
N | 234 | M234I | atG | atT | 12 | 12 | B.1.9.5 | 0.068182 |
N | 234 | M234I | atG | atT | 11 | 11 | AY.20 | 0.000428 |
N | 234 | M234I | atG | atT | 7 | 11 | AY.23 | 0.000488 |
N | 234 | M234I | atG | atC | 3 | 11 | AY.23 | 0.000209 |
N | 234 | M234I | atG | atA | 1 | 11 | AY.23 | 0.00007 |
N | 234 | M234V | Atg | Gtg | 11 | 11 | AY.4 | 0.000017 |
N | 234 | M234I | atG | atT | 8 | 11 | AY.5 | 0.000165 |
N | 234 | M234I | atG | atA | 3 | 11 | AY.5 | 0.000062 |
N | 234 | M234I | atG | atT | 9 | 11 | AY.61 | 0.000943 |
N | 234 | M234I | atG | atA | 1 | 11 | AY.61 | 0.000105 |
N | 234 | M234I | atG | atC | 1 | 11 | AY.61 | 0.000105 |
N | 234 | M234I | atG | atT | 11 | 11 | B.1.1.1 | 0.003594 |
N | 234 | M234I | atG | atT | 9 | 11 | B.1.1.294 | 0.011392 |
N | 234 | M234I | atG | atC | 2 | 11 | B.1.1.294 | 0.002532 |
N | 234 | M234I | atG | atC | 11 | 11 | B.1.177.43 | 0.016248 |
N | 234 | M234I | atG | atT | 11 | 11 | B.1.540 | 0.106796 |
N | 234 | M234V | Atg | Gtg | 10 | 10 | AY.3 | 0.000099 |
N | 234 | M234I | atG | atT | 10 | 10 | AY.3.1 | 0.000853 |
N | 234 | M234I | atG | atT | 10 | 10 | AY.46.6 | 0.000722 |
N | 234 | M234I | atG | atT | 10 | 10 | B.1.1.433 | 0.014245 |
N | 234 | M234I | atG | atT | 10 | 10 | B.1.1.63 | 0.003858 |
N | 234 | M234T | aTg | aCg | 10 | 10 | B.1.1.7 | 0.000009 |
N | 234 | M234I | atG | atT | 10 | 10 | B.1.243 | 0.000696 |
N | 234 | M234I | atG | atT | 10 | 10 | B.1.258.24 | 0.107527 |
N | 234 | M234I | atG | atT | 10 | 10 | B.1.258.4 | 0.034483 |
N | 234 | M234V | Atg | Gtg | 10 | 10 | B.1.429 | 0.000235 |
N | 234 | M234I | atG | atT | 10 | 10 | B.4 | 0.022075 |
N | 234 | M234I | atG | atC | 10 | 10 | R.1 | 0.0009 |
N | 234 | M234V | Atg | Gtg | 9 | 9 | AY.25 | 0.000054 |
N | 234 | M234I | atG | atT | 6 | 9 | AY.39 | 0.000148 |
N | 234 | M234I | atG | atC | 3 | 9 | AY.39 | 0.000074 |
N | 234 | M234I | atG | atT | 9 | 9 | B.1.1.56 | 0.160714 |
N | 234 | M234del | ATG | --- | 9 | 9 | B.1.1.7 | 0.000008 |
N | 234 | M234I | atG | atA | 7 | 9 | B.1.214.2 | 0.004197 |
N | 234 | M234I | atG | atT | 1 | 9 | B.1.214.2 | 0.0006 |
N | 234 | M234I | atG | atC | 1 | 9 | B.1.214.2 | 0.0006 |
N | 234 | M234I | atG | atT | 7 | 9 | B.1.356 | 0.01209 |
N | 234 | M234I | atG | atA | 2 | 9 | B.1.356 | 0.003454 |
N | 234 | M234I | atG | atC | 6 | 9 | B.1.509 | 0.005195 |
N | 234 | M234I | atG | atT | 3 | 9 | B.1.509 | 0.002597 |
N | 234 | M234I | atG | atT | 9 | 9 | B.1.617.1 | 0.001161 |
N | 234 | M234I | atG | atA | 5 | 8 | AY.16 | 0.001898 |
N | 234 | M234I | atG | atT | 2 | 8 | AY.16 | 0.000759 |
N | 234 | M234I | atG | atC | 1 | 8 | AY.16 | 0.00038 |
N | 234 | M234I | atG | atT | 7 | 8 | AY.47 | 0.000218 |
N | 234 | M234I | atG | atC | 1 | 8 | AY.47 | 0.000031 |
N | 234 | M234L | Atg | Ctg | 8 | 8 | AY.9 | 0.000541 |
N | 234 | M234L | Atg | Ttg | 8 | 8 | B.1.1 | 0.000145 |
N | 234 | M234I | atG | atT | 7 | 8 | B.1.1.216 | 0.006233 |
N | 234 | M234I | atG | atC | 1 | 8 | B.1.1.216 | 0.00089 |
N | 234 | M234I | atG | atT | 8 | 8 | B.1.1.291 | 0.005939 |
N | 234 | M234V | Atg | Gtg | 8 | 8 | B.1.2 | 0.00007 |
N | 234 | M234I | atG | atT | 8 | 8 | B.1.236 | 0.016427 |
N | 234 | M234I | atG | atC | 4 | 8 | B.1.375 | 0.003279 |
N | 234 | M234I | atG | atT | 4 | 8 | B.1.375 | 0.003279 |
N | 234 | M234V | Atg | Gtg | 8 | 8 | P.1 | 0.000126 |
N | 234 | M234I | atG | atT | 3 | 7 | A | 0.001161 |
N | 234 | M234I | atG | atA | 3 | 7 | A | 0.001161 |
N | 234 | M234I | atG | atC | 1 | 7 | A | 0.000387 |
N | 234 | M234T | aTg | aCg | 7 | 7 | AY.103 | 0.000043 |
N | 234 | M234I | atG | atT | 7 | 7 | AY.16.1 | 0.003289 |
N | 234 | M234I | atG | atT | 7 | 7 | AY.27 | 0.000453 |
N | 234 | M234L | Atg | Ttg | 7 | 7 | AY.35 | 0.001631 |
N | 234 | M234I | atG | atT | 7 | 7 | AY.4.5 | 0.000752 |
N | 234 | M234I | atG | atT | 7 | 7 | AY.9.1 | 0.000586 |
N | 234 | M234I | atG | atT | 7 | 7 | B.1.1.45 | 0.098592 |
N | 234 | M234I | atG | atT | 7 | 7 | B.1.1.51 | 0.012027 |
N | 234 | M234L | Atg | Ttg | 5 | 7 | B.1.2 | 0.000044 |
N | 234 | M234L | Atg | Ctg | 2 | 7 | B.1.2 | 0.000018 |
N | 234 | M234V | Atg | Gtg | 7 | 7 | B.1.351 | 0.000208 |
N | 234 | M234I | atG | atA | 7 | 7 | B.1.636 | 0.04698 |
N | 234 | M234I | atG | atT | 5 | 7 | P.1.17 | 0.000809 |
N | 234 | M234I | atG | atA | 2 | 7 | P.1.17 | 0.000324 |
N | 234 | M234L | Atg | Ttg | 6 | 6 | A.5 | 0.011538 |
N | 234 | M234F | AtG | TtT | 6 | 6 | All | 0.000001 |
N | 234 | M234V | Atg | Gtg | 6 | 6 | AY.103 | 0.000037 |
N | 234 | M234I | atG | atA | 5 | 6 | AY.105 | 0.003215 |
N | 234 | M234I | atG | atT | 1 | 6 | AY.105 | 0.000643 |
N | 234 | M234I | atG | atT | 5 | 6 | AY.33 | 0.000334 |
N | 234 | M234I | atG | atC | 1 | 6 | AY.33 | 0.000067 |
N | 234 | M234L | Atg | Ttg | 4 | 6 | AY.43 | 0.000018 |
N | 234 | M234L | Atg | Ctg | 1 | 6 | AY.43 | 0.000004 |
N | 234 | M234L | AtG | CtC | 1 | 6 | AY.43 | 0.000004 |
N | 234 | M234I | atG | atT | 6 | 6 | B.1.1.448 | 0.012195 |
N | 234 | M234I | atG | atT | 6 | 6 | B.1.351.5 | 0.003597 |
N | 234 | M234I | atG | atT | 6 | 6 | B.1.400 | 0.002574 |
N | 234 | M234I | atG | atT | 4 | 6 | B.1.409 | 0.003125 |
N | 234 | M234I | atG | atC | 2 | 6 | B.1.409 | 0.001563 |
N | 234 | M234I | atG | atT | 6 | 6 | B.1.466.2 | 0.002347 |
N | 234 | M234I | atG | atT | 5 | 5 | A.30 | 0.714286 |
N | 234 | M234del2 | ATg | --g | 3 | 5 | All | 0.000001 |
N | 234 | M234del2 | aTG | a-- | 2 | 5 | All | 0 |
N | 234 | M234I | atG | atC | 5 | 5 | AY.116 | 0.001434 |
N | 234 | M234T | aTg | aCg | 5 | 5 | AY.117 | 0.000423 |
N | 234 | M234T | aTg | aCg | 5 | 5 | AY.25 | 0.00003 |
N | 234 | M234I | atG | atT | 4 | 5 | AY.45 | 0.000487 |
N | 234 | M234I | atG | atA | 1 | 5 | AY.45 | 0.000122 |
N | 234 | M234del | ATG | --- | 5 | 5 | B.1 | 0.000046 |
N | 234 | M234T | aTg | aCg | 5 | 5 | B.1 | 0.000046 |
N | 234 | M234L | Atg | Ttg | 5 | 5 | B.1.1.189 | 0.007564 |
N | 234 | M234V | Atg | Gtg | 5 | 5 | B.1.1.219 | 0.025 |
N | 234 | M234I | atG | atT | 5 | 5 | B.1.1.220 | 0.009294 |
N | 234 | M234I | atG | atT | 5 | 5 | B.1.1.284 | 0.000537 |
N | 234 | M234I | atG | atT | 5 | 5 | B.1.1.506 | 0.185185 |
N | 234 | M234I | atG | atT | 5 | 5 | B.1.1.67 | 0.022831 |
N | 234 | M234I | atG | atT | 5 | 5 | B.1.281 | 0.108696 |
N | 234 | M234I | atG | atT | 5 | 5 | B.1.320 | 0.006227 |
N | 234 | M234I | atG | atT | 5 | 5 | B.1.470 | 0.007022 |
N | 234 | M234I | atG | atT | 5 | 5 | B.1.580 | 0.020325 |
N | 234 | M234I | atG | atT | 5 | 5 | C.14 | 0.021645 |
N | 234 | M234I | atG | atT | 5 | 5 | C.36 | 0.004554 |
N | 234 | M234I | atG | atT | 3 | 5 | P.1.15 | 0.000697 |
N | 234 | M234I | atG | atC | 2 | 5 | P.1.15 | 0.000465 |
N | 234 | M234I | atG | atT | 5 | 5 | P.5 | 0.068493 |
N | 234 | M234N | aTG | aAT | 4 | 4 | All | 0.000001 |
N | 234 | M234T | aTg | aCg | 4 | 4 | AY.20 | 0.000155 |
N | 234 | M234K | aTg | aAg | 4 | 4 | AY.43 | 0.000018 |
N | 234 | M234V | Atg | Gtg | 4 | 4 | AY.43 | 0.000018 |
N | 234 | M234I | atG | atT | 3 | 4 | AY.95 | 0.002283 |
N | 234 | M234I | atG | atA | 1 | 4 | AY.95 | 0.000761 |
N | 234 | M234I | atG | atT | 4 | 4 | AY.99.2 | 0.000369 |
N | 234 | M234K | aTg | aAg | 3 | 4 | B.1 | 0.000027 |
N | 234 | M234K | aTG | aAA | 1 | 4 | B.1 | 0.000009 |
N | 234 | M234I | atG | atT | 4 | 4 | B.1.1.161 | 0.014134 |
N | 234 | M234I | atG | atT | 4 | 4 | B.1.1.261 | 0.034483 |
N | 234 | M234I | atG | atT | 4 | 4 | B.1.1.370 | 0.050633 |
N | 234 | M234L | Atg | Ttg | 2 | 4 | B.1.1.7 | 0.000002 |
N | 234 | M234L | AtG | CtC | 1 | 4 | B.1.1.7 | 0.000001 |
N | 234 | M234L | Atg | Ctg | 1 | 4 | B.1.1.7 | 0.000001 |
N | 234 | M234I | atG | atT | 4 | 4 | B.1.177.77 | 0.002905 |
N | 234 | M234I | atG | atC | 4 | 4 | B.1.260 | 0.013378 |
N | 234 | M234I | atG | atC | 4 | 4 | B.1.465 | 0.015209 |
N | 234 | M234I | atG | atT | 3 | 4 | B.1.468 | 0.017143 |
N | 234 | M234I | atG | atC | 1 | 4 | B.1.468 | 0.005714 |
N | 234 | M234I | atG | atC | 4 | 4 | B.1.473 | 0.076923 |
N | 234 | M234I | atG | atT | 3 | 4 | B.1.525 | 0.000339 |
N | 234 | M234I | atG | atA | 1 | 4 | B.1.525 | 0.000113 |
N | 234 | M234I | atG | atA | 4 | 4 | B.1.575 | 0.001214 |
N | 234 | M234I | atG | atT | 4 | 4 | B.1.621 | 0.000354 |
N | 234 | M234I | atG | atT | 4 | 4 | B.4.1 | 0.075472 |
N | 234 | M234I | atG | atT | 3 | 4 | D.2 | 0.000225 |
N | 234 | M234I | atG | atA | 1 | 4 | D.2 | 0.000075 |
N | 234 | M234I | atG | atT | 4 | 4 | N.6 | 0.028369 |
N | 234 | M234I | atG | atT | 3 | 4 | P.1.1 | 0.000953 |
N | 234 | M234I | atG | atA | 1 | 4 | P.1.1 | 0.000318 |
N | 234 | M234del1 | atG | at- | 2 | 3 | All | 0 |
N | 234 | M234del1 | AtG | -tC | 1 | 3 | All | 0 |
N | 234 | M234V | Atg | Gtg | 3 | 3 | AU.2 | 0.007264 |
N | 234 | M234I | atG | atT | 3 | 3 | AY.113 | 0.000427 |
N | 234 | M234I | atG | atT | 3 | 3 | AY.118 | 0.000188 |
N | 234 | M234I | atG | atC | 2 | 3 | AY.119 | 0.000071 |
N | 234 | M234I | atG | atT | 1 | 3 | AY.119 | 0.000035 |
N | 234 | M234L | Atg | Ttg | 3 | 3 | AY.23 | 0.000209 |
N | 234 | M234L | Atg | Ttg | 3 | 3 | AY.25 | 0.000018 |
N | 234 | M234L | Atg | Ttg | 2 | 3 | AY.4 | 0.000003 |
N | 234 | M234L | Atg | Ctg | 1 | 3 | AY.4 | 0.000002 |
N | 234 | M234I | atG | atT | 2 | 3 | AY.4.2 | 0.000043 |
N | 234 | M234I | atG | atC | 1 | 3 | AY.4.2 | 0.000022 |
N | 234 | M234T | aTg | aCg | 3 | 3 | AY.43 | 0.000013 |
N | 234 | M234V | Atg | Gtg | 3 | 3 | AY.5 | 0.000062 |
N | 234 | M234I | atG | atA | 2 | 3 | AY.62 | 0.000871 |
N | 234 | M234I | atG | atT | 1 | 3 | AY.62 | 0.000436 |
N | 234 | M234I | atG | atT | 3 | 3 | AY.68 | 0.000821 |
N | 234 | M234I | atG | atT | 3 | 3 | AY.75.1 | 0.000541 |
N | 234 | M234I | atG | atT | 3 | 3 | B.1.1.101 | 0.03 |
N | 234 | M234L | Atg | Ttg | 3 | 3 | B.1.1.28 | 0.000934 |
N | 234 | M234I | atG | atT | 3 | 3 | B.1.1.312 | 0.005736 |
N | 234 | M234I | atG | atT | 3 | 3 | B.1.1.317 | 0.001235 |
N | 234 | M234I | atG | atT | 2 | 3 | B.1.1.372 | 0.001377 |
N | 234 | M234I | atG | atA | 1 | 3 | B.1.1.372 | 0.000689 |
N | 234 | M234I | atG | atT | 3 | 3 | B.1.1.521 | 0.016043 |
N | 234 | M234I | atG | atT | 3 | 3 | B.1.1.54 | 0.009063 |
N | 234 | M234I | atG | atT | 3 | 3 | B.1.1.95 | 0.058824 |
N | 234 | M234I | atG | atT | 2 | 3 | B.1.139 | 0.001466 |
N | 234 | M234I | atG | atA | 1 | 3 | B.1.139 | 0.000733 |
N | 234 | M234I | atG | atT | 2 | 3 | B.1.157 | 0.00597 |
N | 234 | M234I | atG | atC | 1 | 3 | B.1.157 | 0.002985 |
N | 234 | M234V | Atg | Gtg | 3 | 3 | B.1.177 | 0.00004 |
N | 234 | M234I | atG | atT | 3 | 3 | B.1.240 | 0.000647 |
N | 234 | M234I | atG | atT | 2 | 3 | B.1.369 | 0.00057 |
N | 234 | M234I | atG | atA | 1 | 3 | B.1.369 | 0.000285 |
N | 234 | M234I | atG | atA | 3 | 3 | B.1.389 | 0.003006 |
N | 234 | M234I | atG | atT | 3 | 3 | B.1.462 | 0.021739 |
N | 234 | M234L | AtG | TtA | 3 | 3 | B.1.526 | 0.000071 |
N | 234 | M234I | atG | atA | 3 | 3 | B.1.530 | 0.021429 |
N | 234 | M234V | AtG | GtA | 3 | 3 | B.1.623 | 0.001609 |
N | 234 | M234I | atG | atT | 3 | 3 | C.33 | 0.176471 |
N | 234 | M234I | atG | atT | 3 | 3 | P.6 | 0.009434 |
N | 234 | M234L | AtG | CtT | 1 | 2 | 0.055556 | |
N | 234 | M234L | Atg | Ctg | 1 | 2 | 0.055556 | |
N | 234 | M234H | ATG | CAT | 2 | 2 | All | 0 |
N | 234 | M234I | atG | atC | 2 | 2 | AY.117 | 0.000169 |
N | 234 | M234T | aTg | aCg | 2 | 2 | AY.118 | 0.000125 |
N | 234 | M234I | atG | atT | 2 | 2 | AY.120 | 0.000074 |
N | 234 | M234I | atG | atT | 2 | 2 | AY.121 | 0.000271 |
N | 234 | M234I | atG | atT | 2 | 2 | AY.14 | 0.000176 |
N | 234 | M234I | atG | atT | 2 | 2 | AY.29.1 | 0.000441 |
N | 234 | M234F | AtG | TtT | 2 | 2 | AY.29.1 | 0.000441 |
N | 234 | M234T | aTg | aCg | 2 | 2 | AY.3 | 0.00002 |
N | 234 | M234R | aTg | aGg | 2 | 2 | AY.3 | 0.00002 |
N | 234 | M234I | atG | atT | 2 | 2 | AY.34.1 | 0.00102 |
N | 234 | M234V | Atg | Gtg | 2 | 2 | AY.35 | 0.000466 |
N | 234 | M234V | Atg | Gtg | 2 | 2 | AY.36 | 0.000296 |
N | 234 | M234K | aTg | aAg | 2 | 2 | AY.4 | 0.000003 |
N | 234 | M234T | aTg | aCg | 2 | 2 | AY.4.2 | 0.000043 |
N | 234 | M234T | aTg | aCg | 2 | 2 | AY.44 | 0.000012 |
N | 234 | M234L | Atg | Ttg | 2 | 2 | AY.44 | 0.000012 |
N | 234 | M234I | atG | atT | 2 | 2 | AY.5.3 | 0.000675 |
N | 234 | M234del | ATG | --- | 2 | 2 | AY.50 | 0.001599 |
N | 234 | M234I | atG | atT | 2 | 2 | AY.60 | 0.001876 |
N | 234 | M234I | atG | atC | 2 | 2 | AY.7 | 0.000392 |
N | 234 | M234I | atG | atT | 2 | 2 | AY.71 | 0.00095 |
N | 234 | M234I | atG | atT | 2 | 2 | AY.72 | 0.002721 |
N | 234 | M234del | ATG | --- | 2 | 2 | AY.75 | 0.000112 |
N | 234 | M234L | Atg | Ttg | 2 | 2 | AY.75 | 0.000112 |
N | 234 | M234F | AtG | TtT | 2 | 2 | B.1 | 0.000018 |
N | 234 | M234I | atG | atT | 2 | 2 | B.1.1.10 | 0.00223 |
N | 234 | M234I | atG | atT | 2 | 2 | B.1.1.129 | 0.018349 |
N | 234 | M234I | atG | atT | 2 | 2 | B.1.1.148 | 0.017544 |
N | 234 | M234I | atG | atC | 2 | 2 | B.1.1.153 | 0.002191 |
N | 234 | M234I | atG | atT | 2 | 2 | B.1.1.218 | 0.015385 |
N | 234 | M234I | atG | atT | 2 | 2 | B.1.1.226 | 0.011628 |
N | 234 | M234I | atG | atT | 2 | 2 | B.1.1.241 | 0.004141 |
N | 234 | M234I | atG | atT | 2 | 2 | B.1.1.269 | 0.002706 |
N | 234 | M234I | atG | atT | 2 | 2 | B.1.1.33 | 0.000842 |
N | 234 | M234I | atG | atT | 2 | 2 | B.1.1.336 | 0.033333 |
N | 234 | M234I | atG | atC | 1 | 2 | B.1.1.37 | 0.000193 |
N | 234 | M234I | atG | atT | 1 | 2 | B.1.1.37 | 0.000193 |
N | 234 | M234I | atG | atT | 2 | 2 | B.1.1.407 | 0.083333 |
N | 234 | M234I | atG | atT | 2 | 2 | B.1.1.411 | 0.029412 |
N | 234 | M234I | atG | atT | 2 | 2 | B.1.1.437 | 0.020833 |
N | 234 | M234I | atG | atT | 2 | 2 | B.1.1.453 | 0.016949 |
N | 234 | M234I | atG | atT | 2 | 2 | B.1.1.459 | 0.030769 |
N | 234 | M234I | atG | atT | 2 | 2 | B.1.1.464 | 0.002946 |
N | 234 | M234L | Atg | Ttg | 2 | 2 | B.1.1.63 | 0.000772 |
N | 234 | M234K | aTg | aAg | 1 | 2 | B.1.139 | 0.000733 |
N | 234 | M234K | aTG | aAA | 1 | 2 | B.1.139 | 0.000733 |
N | 234 | M234del | ATG | --- | 2 | 2 | B.1.2 | 0.000018 |
N | 234 | M234I | atG | atT | 2 | 2 | B.1.214 | 0.007326 |
N | 234 | M234I | atG | atC | 2 | 2 | B.1.222 | 0.003384 |
N | 234 | M234F | AtG | TtT | 2 | 2 | B.1.236 | 0.004107 |
N | 234 | M234I | atG | atA | 2 | 2 | B.1.243.1 | 0.044444 |
N | 234 | M234I | atG | atA | 2 | 2 | B.1.336 | 0.004878 |
N | 234 | M234V | AtG | GtT | 1 | 2 | B.1.349 | 0.000715 |
N | 234 | M234V | Atg | Gtg | 1 | 2 | B.1.349 | 0.000715 |
N | 234 | M234del | ATG | --- | 2 | 2 | B.1.351 | 0.000059 |
N | 234 | M234I | atG | atT | 2 | 2 | B.1.36.1 | 0.002281 |
N | 234 | M234I | atG | atA | 2 | 2 | B.1.36.17 | 0.000988 |
N | 234 | M234I | atG | atC | 2 | 2 | B.1.36.22 | 0.002415 |
N | 234 | M234I | atG | atT | 2 | 2 | B.1.398 | 0.005952 |
N | 234 | M234I | atG | atA | 2 | 2 | B.1.413 | 0.008511 |
N | 234 | M234I | atG | atC | 2 | 2 | B.1.416.1 | 0.003125 |
N | 234 | M234V | AtG | GtC | 1 | 2 | B.1.416.1 | 0.001563 |
N | 234 | M234V | Atg | Gtg | 1 | 2 | B.1.416.1 | 0.001563 |
N | 234 | M234V | Atg | Gtg | 2 | 2 | B.1.427 | 0.000101 |
N | 234 | M234del | ATG | --- | 2 | 2 | B.1.427 | 0.000101 |
N | 234 | M234I | atG | atT | 1 | 2 | B.1.428 | 0.00102 |
N | 234 | M234I | atG | atC | 1 | 2 | B.1.428 | 0.00102 |
N | 234 | M234I | atG | atC | 1 | 2 | B.1.453 | 0.003236 |
N | 234 | M234I | atG | atT | 1 | 2 | B.1.453 | 0.003236 |
N | 234 | M234V | Atg | Gtg | 2 | 2 | B.1.470 | 0.002809 |
N | 234 | M234I | atG | atT | 2 | 2 | B.1.533 | 0.019231 |
N | 234 | M234I | atG | atT | 2 | 2 | B.1.555 | 0.044444 |
N | 234 | M234I | atG | atT | 2 | 2 | B.1.564 | 0.000852 |
N | 234 | M234I | atG | atC | 1 | 2 | B.1.599 | 0.00365 |
N | 234 | M234I | atG | atT | 1 | 2 | B.1.599 | 0.00365 |
N | 234 | M234del | ATG | --- | 2 | 2 | B.1.617.2 | 0.000008 |
N | 234 | M234I | atG | atT | 2 | 2 | B.1.621.1 | 0.001012 |
N | 234 | M234I | atG | atA | 1 | 2 | B.1.628 | 0.000352 |
N | 234 | M234I | atG | atT | 1 | 2 | B.1.628 | 0.000352 |
N | 234 | M234I | atG | atC | 2 | 2 | B.23 | 0.005848 |
N | 234 | M234L | Atg | Ttg | 2 | 2 | B.55 | 0.0059 |
N | 234 | M234I | atG | atC | 1 | 2 | C.16 | 0.00106 |
N | 234 | M234I | atG | atT | 1 | 2 | C.16 | 0.00106 |
N | 234 | M234I | atG | atT | 2 | 2 | P.1.10 | 0.000539 |
N | 234 | M234I | atG | atT | 2 | 2 | P.1.7 | 0.000639 |
N | 234 | M234I | atG | atT | 2 | 2 | Q.3 | 0.00029 |
N | 234 | M234K | aTg | aAg | 1 | 1 | 0.055556 | |
N | 234 | M234I | atG | atT | 1 | 1 | 0.055556 | |
N | 234 | M234H | ATG | CAT | 1 | 1 | 0.055556 | |
N | 234 | M234Q | ATg | CAg | 1 | 1 | 0.055556 | |
N | 234 | M234N | aTG | aAT | 1 | 1 | 0.055556 | |
N | 234 | M234I | atG | atT | 1 | 1 | A.1 | 0.000282 |
N | 234 | M234I | atG | atC | 1 | 1 | A.19 | 0.009434 |
N | 234 | M234I | atG | atT | 1 | 1 | A.2 | 0.000662 |
N | 234 | M234I | atG | atT | 1 | 1 | A.2.3 | 0.004739 |
N | 234 | M234I | atG | atT | 1 | 1 | A.2.4 | 0.003367 |
N | 234 | M234I | atG | atT | 1 | 1 | A.5 | 0.001923 |
N | 234 | M234I | atG | atT | 1 | 1 | AD.1 | 0.004115 |
N | 234 | M234I | atG | atT | 1 | 1 | AD.2 | 0.000219 |
N | 234 | M234I | atG | atA | 1 | 1 | AE.8 | 0.000489 |
N | 234 | M234A | ATG | GCT | 1 | 1 | All | 0 |
N | 234 | M234G | ATG | GGT | 1 | 1 | All | 0 |
N | 234 | M234E | ATg | GAg | 1 | 1 | All | 0 |
N | 234 | M234Q | ATg | CAg | 1 | 1 | All | 0 |
N | 234 | M234S | aTG | aGT | 1 | 1 | All | 0 |
N | 234 | M234X | ATg | TAg | 1 | 1 | All | 0 |
N | 234 | M234I | atG | atC | 1 | 1 | AN.1 | 0.02 |
N | 234 | M234I | atG | atT | 1 | 1 | AT.1 | 0.005128 |
N | 234 | M234V | Atg | Gtg | 1 | 1 | AY.100 | 0.000046 |
N | 234 | M234V | Atg | Gtg | 1 | 1 | AY.102 | 0.000027 |
N | 234 | M234del2 | aTG | a-- | 1 | 1 | AY.103 | 0.000006 |
N | 234 | M234V | Atg | Gtg | 1 | 1 | AY.116 | 0.000287 |
N | 234 | M234V | Atg | Gtg | 1 | 1 | AY.117 | 0.000085 |
N | 234 | M234L | Atg | Ttg | 1 | 1 | AY.117 | 0.000085 |
N | 234 | M234V | Atg | Gtg | 1 | 1 | AY.119 | 0.000035 |
N | 234 | M234T | aTg | aCg | 1 | 1 | AY.120 | 0.000037 |
N | 234 | M234V | Atg | Gtg | 1 | 1 | AY.120 | 0.000037 |
N | 234 | M234I | atG | atT | 1 | 1 | AY.120.2 | 0.001285 |
N | 234 | M234del2 | ATg | --g | 1 | 1 | AY.121 | 0.000135 |
N | 234 | M234K | aTg | aAg | 1 | 1 | AY.16 | 0.00038 |
N | 234 | M234L | Atg | Ttg | 1 | 1 | AY.16.1 | 0.00047 |
N | 234 | M234I | atG | atA | 1 | 1 | AY.2 | 0.000356 |
N | 234 | M234del | ATG | --- | 1 | 1 | AY.20 | 0.000039 |
N | 234 | M234V | Atg | Gtg | 1 | 1 | AY.23 | 0.00007 |
N | 234 | M234I | atG | atT | 1 | 1 | AY.24 | 0.000431 |
N | 234 | M234del | ATG | --- | 1 | 1 | AY.25 | 0.000006 |
N | 234 | M234R | aTg | aGg | 1 | 1 | AY.25 | 0.000006 |
N | 234 | M234V | Atg | Gtg | 1 | 1 | AY.26 | 0.000028 |
N | 234 | M234V | Atg | Gtg | 1 | 1 | AY.29 | 0.000016 |
N | 234 | M234T | aTg | aCg | 1 | 1 | AY.29 | 0.000016 |
N | 234 | M234L | Atg | Ctg | 1 | 1 | AY.3 | 0.00001 |
N | 234 | M234E | ATg | GAg | 1 | 1 | AY.3 | 0.00001 |
N | 234 | M234G | ATG | GGT | 1 | 1 | AY.3 | 0.00001 |
N | 234 | M234del2 | aTG | a-- | 1 | 1 | AY.3 | 0.00001 |
N | 234 | M234V | Atg | Gtg | 1 | 1 | AY.3.1 | 0.000085 |
N | 234 | M234I | atG | atA | 1 | 1 | AY.30 | 0.000396 |
N | 234 | M234T | aTg | aCg | 1 | 1 | AY.33 | 0.000067 |
N | 234 | M234I | atG | atT | 1 | 1 | AY.37 | 0.000316 |
N | 234 | M234I | atG | atT | 1 | 1 | AY.38 | 0.000499 |
N | 234 | M234I | atG | atT | 1 | 1 | AY.39.1 | 0.00004 |
N | 234 | M234del | ATG | --- | 1 | 1 | AY.40 | 0.000964 |
N | 234 | M234V | Atg | Gtg | 1 | 1 | AY.42 | 0.00004 |
N | 234 | M234A | ATG | GCT | 1 | 1 | AY.43 | 0.000004 |
N | 234 | M234del | ATG | --- | 1 | 1 | AY.43 | 0.000004 |
N | 234 | M234T | aTg | aCg | 1 | 1 | AY.45 | 0.000122 |
N | 234 | M234L | Atg | Ttg | 1 | 1 | AY.45 | 0.000122 |
N | 234 | M234I | atG | atA | 1 | 1 | AY.46 | 0.000104 |
N | 234 | M234del | ATG | --- | 1 | 1 | AY.46.6 | 0.000072 |
N | 234 | M234L | Atg | Ttg | 1 | 1 | AY.47 | 0.000031 |
N | 234 | M234L | Atg | Ttg | 1 | 1 | AY.48 | 0.000465 |
N | 234 | M234T | aTg | aCg | 1 | 1 | AY.5 | 0.000021 |
N | 234 | M234I | atG | atT | 1 | 1 | AY.51 | 0.000909 |
N | 234 | M234I | atG | atT | 1 | 1 | AY.55 | 0.000917 |
N | 234 | M234I | atG | atT | 1 | 1 | AY.56 | 0.001605 |
N | 234 | M234I | atG | atT | 1 | 1 | AY.6 | 0.000041 |
N | 234 | M234T | aTg | aCg | 1 | 1 | AY.62 | 0.000436 |
N | 234 | M234I | atG | atT | 1 | 1 | AY.63 | 0.000387 |
N | 234 | M234I | atG | atC | 1 | 1 | AY.69 | 0.000187 |
N | 234 | M234V | Atg | Gtg | 1 | 1 | AY.7 | 0.000196 |
N | 234 | M234I | atG | atC | 1 | 1 | AY.7.2 | 0.000559 |
N | 234 | M234I | atG | atT | 1 | 1 | AY.70 | 0.000209 |
N | 234 | M234K | aTg | aAg | 1 | 1 | AY.72 | 0.001361 |
N | 234 | M234I | atG | atT | 1 | 1 | AY.79 | 0.001211 |
N | 234 | M234T | aTg | aCg | 1 | 1 | AY.86 | 0.00083 |
N | 234 | M234K | aTg | aAg | 1 | 1 | AY.9 | 0.000068 |
N | 234 | M234R | aTg | aGg | 1 | 1 | AY.9 | 0.000068 |
N | 234 | M234V | Atg | Gtg | 1 | 1 | AY.9.1 | 0.000084 |
N | 234 | M234I | atG | atT | 1 | 1 | AY.93 | 0.000273 |
N | 234 | M234T | aTg | aCg | 1 | 1 | AY.98.1 | 0.000048 |
N | 234 | M234I | atG | atA | 1 | 1 | AY.98.1 | 0.000048 |
N | 234 | M234del | ATG | --- | 1 | 1 | AY.99 | 0.001049 |
N | 234 | M234L | Atg | Ttg | 1 | 1 | B | 0.000128 |
N | 234 | M234H | ATG | CAT | 1 | 1 | B.1 | 0.000009 |
N | 234 | M234N | aTG | aAT | 1 | 1 | B.1 | 0.000009 |
N | 234 | M234R | aTg | aGg | 1 | 1 | B.1 | 0.000009 |
N | 234 | M234K | aTg | aAg | 1 | 1 | B.1.1 | 0.000018 |
N | 234 | M234V | Atg | Gtg | 1 | 1 | B.1.1 | 0.000018 |
N | 234 | M234del | ATG | --- | 1 | 1 | B.1.1 | 0.000018 |
N | 234 | M234T | aTg | aCg | 1 | 1 | B.1.1 | 0.000018 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.1.117 | 0.009709 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.1.128 | 0.007092 |
N | 234 | M234L | Atg | Ttg | 1 | 1 | B.1.1.135 | 0.004695 |
N | 234 | M234del | ATG | --- | 1 | 1 | B.1.1.139 | 0.022727 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.1.141 | 0.002012 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.1.164 | 0.005155 |
N | 234 | M234I | atG | atC | 1 | 1 | B.1.1.176 | 0.000439 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.1.189 | 0.001513 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.1.207 | 0.001182 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.1.232 | 0.001815 |
N | 234 | M234I | atG | atC | 1 | 1 | B.1.1.236 | 0.006897 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.1.253 | 0.002506 |
N | 234 | M234V | Atg | Gtg | 1 | 1 | B.1.1.27 | 0.00565 |
N | 234 | M234L | Atg | Ttg | 1 | 1 | B.1.1.284 | 0.000107 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.1.286 | 0.002899 |
N | 234 | M234L | Atg | Ttg | 1 | 1 | B.1.1.302 | 0.002075 |
N | 234 | M234I | atG | atC | 1 | 1 | B.1.1.302 | 0.002075 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.1.303 | 0.002762 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.1.309 | 0.005848 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.1.31 | 0.066667 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.1.315 | 0.008475 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.1.316 | 0.000925 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.1.322 | 0.008772 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.1.333 | 0.001076 |
N | 234 | M234L | Atg | Ttg | 1 | 1 | B.1.1.348 | 0.000796 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.1.348 | 0.000796 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.1.354 | 0.004386 |
N | 234 | M234I | atG | atC | 1 | 1 | B.1.1.381 | 0.04 |
N | 234 | M234I | atG | atA | 1 | 1 | B.1.1.406 | 0.006494 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.1.432 | 0.001266 |
N | 234 | M234I | atG | atA | 1 | 1 | B.1.1.434 | 0.000349 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.1.44 | 0.00241 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.1.442 | 0.018519 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.1.463 | 0.0625 |
N | 234 | M234L | Atg | Ctg | 1 | 1 | B.1.1.464 | 0.001473 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.1.484 | 0.1 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.1.500 | 0.02 |
N | 234 | M234I | atG | atA | 1 | 1 | B.1.1.507 | 0.008696 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.1.512 | 0.028571 |
N | 234 | M234L | Atg | Ttg | 1 | 1 | B.1.1.519 | 0.00004 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.1.523 | 0.001563 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.1.525 | 0.005464 |
N | 234 | M234L | Atg | Ctg | 1 | 1 | B.1.1.54 | 0.003021 |
N | 234 | M234N | aTG | aAT | 1 | 1 | B.1.1.61 | 0.008772 |
N | 234 | M234K | aTg | aAg | 1 | 1 | B.1.1.61 | 0.008772 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.1.61 | 0.008772 |
N | 234 | M234del1 | atG | at- | 1 | 1 | B.1.1.7 | 0.000001 |
N | 234 | M234K | aTg | aAg | 1 | 1 | B.1.1.7 | 0.000001 |
N | 234 | M234I | atG | atC | 1 | 1 | B.1.1.70 | 0.000341 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.1.74 | 0.00431 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.1.86 | 0.035714 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.1.99 | 0.02381 |
N | 234 | M234I | atG | atC | 1 | 1 | B.1.104 | 0.00369 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.113 | 0.015625 |
N | 234 | M234I | atG | atC | 1 | 1 | B.1.124 | 0.007812 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.13 | 0.002375 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.147 | 0.000756 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.158 | 0.02381 |
N | 234 | M234T | aTG | aCC | 1 | 1 | B.1.160 | 0.000031 |
N | 234 | M234del1 | atG | at- | 1 | 1 | B.1.177 | 0.000013 |
N | 234 | M234K | aTg | aAg | 1 | 1 | B.1.177 | 0.000013 |
N | 234 | M234I | atG | atC | 1 | 1 | B.1.177.20 | 0.001517 |
N | 234 | M234I | atG | atC | 1 | 1 | B.1.177.21 | 0.000076 |
N | 234 | M234I | atG | atC | 1 | 1 | B.1.177.23 | 0.003236 |
N | 234 | M234I | atG | atC | 1 | 1 | B.1.177.32 | 0.00135 |
N | 234 | M234T | aTg | aCg | 1 | 1 | B.1.177.50 | 0.004695 |
N | 234 | M234del1 | AtG | -tC | 1 | 1 | B.1.177.63 | 0.002703 |
N | 234 | M234I | atG | atC | 1 | 1 | B.1.177.8 | 0.000752 |
N | 234 | M234I | atG | atC | 1 | 1 | B.1.177.85 | 0.005435 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.189 | 0.004292 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.190 | 0.01 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.199 | 0.004132 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.201 | 0.005682 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.206 | 0.000816 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.210 | 0.002132 |
N | 234 | M234V | Atg | Gtg | 1 | 1 | B.1.221 | 0.000071 |
N | 234 | M234R | aTg | aGg | 1 | 1 | B.1.221 | 0.000071 |
N | 234 | M234K | aTg | aAg | 1 | 1 | B.1.221 | 0.000071 |
N | 234 | M234S | aTG | aGT | 1 | 1 | B.1.221 | 0.000071 |
N | 234 | M234L | Atg | Ttg | 1 | 1 | B.1.223 | 0.002778 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.232 | 0.000537 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.234 | 0.000132 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.237 | 0.004975 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.247 | 0.014925 |
N | 234 | M234L | Atg | Ctg | 1 | 1 | B.1.258 | 0.000067 |
N | 234 | M234del2 | ATg | --g | 1 | 1 | B.1.258 | 0.000067 |
N | 234 | M234I | atG | atA | 1 | 1 | B.1.258.14 | 0.00098 |
N | 234 | M234V | Atg | Gtg | 1 | 1 | B.1.258.17 | 0.000104 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.258.3 | 0.001675 |
N | 234 | M234I | atG | atA | 1 | 1 | B.1.280 | 0.007143 |
N | 234 | M234I | atG | atC | 1 | 1 | B.1.326 | 0.007576 |
N | 234 | M234T | aTg | aCg | 1 | 1 | B.1.329 | 0.000608 |
N | 234 | M234I | atG | atA | 1 | 1 | B.1.332 | 0.003497 |
N | 234 | M234I | atG | atA | 1 | 1 | B.1.338 | 0.008621 |
N | 234 | M234I | atG | atA | 1 | 1 | B.1.350 | 0.002933 |
N | 234 | M234K | aTg | aAg | 1 | 1 | B.1.351 | 0.00003 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.351.2 | 0.000303 |
N | 234 | M234V | Atg | Gtg | 1 | 1 | B.1.351.3 | 0.000876 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.36.10 | 0.004785 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.36.18 | 0.00042 |
N | 234 | M234I | atG | atC | 1 | 1 | B.1.36.25 | 0.002208 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.36.26 | 0.002857 |
N | 234 | M234L | Atg | Ctg | 1 | 1 | B.1.36.31 | 0.001751 |
N | 234 | M234I | atG | atC | 1 | 1 | B.1.36.35 | 0.002604 |
N | 234 | M234I | atG | atC | 1 | 1 | B.1.36.8 | 0.001 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.362 | 0.001541 |
N | 234 | M234I | atG | atC | 1 | 1 | B.1.378 | 0.006849 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.391 | 0.001127 |
N | 234 | M234I | atG | atA | 1 | 1 | B.1.399 | 0.001934 |
N | 234 | M234L | Atg | Ctg | 1 | 1 | B.1.405 | 0.012346 |
N | 234 | M234I | atG | atC | 1 | 1 | B.1.406 | 0.006061 |
N | 234 | M234V | Atg | Gtg | 1 | 1 | B.1.411 | 0.003704 |
N | 234 | M234del | ATG | --- | 1 | 1 | B.1.415 | 0.014286 |
N | 234 | M234T | aTg | aCg | 1 | 1 | B.1.415.1 | 0.007576 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.420 | 0.010417 |
N | 234 | M234V | Atg | Gtg | 1 | 1 | B.1.422 | 0.000812 |
N | 234 | M234L | Atg | Ttg | 1 | 1 | B.1.429 | 0.000024 |
N | 234 | M234L | AtG | CtT | 1 | 1 | B.1.438.1 | 0.000107 |
N | 234 | M234del | ATG | --- | 1 | 1 | B.1.439 | 0.005917 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.451 | 0.008197 |
N | 234 | M234I | atG | atC | 1 | 1 | B.1.474 | 0.001901 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.497 | 0.000315 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.499 | 0.00105 |
N | 234 | M234I | atG | atA | 1 | 1 | B.1.506 | 0.02381 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.517 | 0.000427 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.524 | 0.001406 |
N | 234 | M234V | Atg | Gtg | 1 | 1 | B.1.524 | 0.001406 |
N | 234 | M234del | ATG | --- | 1 | 1 | B.1.525 | 0.000113 |
N | 234 | M234T | aTg | aCg | 1 | 1 | B.1.525 | 0.000113 |
N | 234 | M234V | Atg | Gtg | 1 | 1 | B.1.533 | 0.009615 |
N | 234 | M234L | Atg | Ttg | 1 | 1 | B.1.538 | 0.008065 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.538 | 0.008065 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.546 | 0.003704 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.551 | 0.00129 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.560 | 0.00463 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.575.1 | 0.002439 |
N | 234 | M234I | atG | atA | 1 | 1 | B.1.576 | 0.000907 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.589 | 0.007576 |
N | 234 | M234L | Atg | Ttg | 1 | 1 | B.1.596 | 0.000087 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.597 | 0.00463 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.600 | 0.005848 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.610 | 0.003546 |
N | 234 | M234del | ATG | --- | 1 | 1 | B.1.617.1 | 0.000129 |
N | 234 | M234del2 | ATg | --g | 1 | 1 | B.1.617.2 | 0.000004 |
N | 234 | M234X | ATg | TAg | 1 | 1 | B.1.617.2 | 0.000004 |
N | 234 | M234del | ATG | --- | 1 | 1 | B.1.621 | 0.000089 |
N | 234 | M234I | atG | atT | 1 | 1 | B.1.627 | 0.00202 |
N | 234 | M234I | atG | atA | 1 | 1 | B.1.638 | 0.052632 |
N | 234 | M234I | atG | atT | 1 | 1 | B.12 | 0.00641 |
N | 234 | M234I | atG | atC | 1 | 1 | B.40 | 0.000364 |
N | 234 | M234I | atG | atT | 1 | 1 | B.6.6 | 0.000889 |
N | 234 | M234I | atG | atA | 1 | 1 | B.6.8 | 0.008264 |
N | 234 | M234I | atG | atT | 1 | 1 | B.61 | 0.005747 |
N | 234 | M234I | atG | atC | 1 | 1 | C.18 | 0.002591 |
N | 234 | M234del | ATG | --- | 1 | 1 | C.35 | 0.000774 |
N | 234 | M234I | atG | atA | 1 | 1 | C.36.1 | 0.004149 |
N | 234 | M234I | atG | atT | 1 | 1 | C.36.3 | 0.000567 |
N | 234 | M234I | atG | atT | 1 | 1 | C.37 | 0.000116 |
N | 234 | M234V | Atg | Gtg | 1 | 1 | C.37 | 0.000116 |
N | 234 | M234del | ATG | --- | 1 | 1 | C.37.1 | 0.002618 |
N | 234 | M234N | aTG | aAT | 1 | 1 | D.2 | 0.000075 |
N | 234 | M234K | aTg | aAg | 1 | 1 | D.2 | 0.000075 |
N | 234 | M234I | atG | atT | 1 | 1 | P.1.12 | 0.000484 |
N | 234 | M234I | atG | atT | 1 | 1 | P.1.14 | 0.000048 |
N | 234 | M234I | atG | atT | 1 | 1 | P.1.16 | 0.000374 |
N | 234 | M234I | atG | atT | 1 | 1 | P.1.6 | 0.001946 |
N | 234 | M234I | atG | atT | 1 | 1 | P.7 | 0.004367 |
N | 234 | M234I | atG | atA | 1 | 1 | Q.1 | 0.000126 |
N | 234 | M234V | Atg | Gtg | 1 | 1 | Q.8 | 0.000165 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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