CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : CodonNum = 214 & Codon = ggT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N214G214GsynggCggT418240350.96484928913-28915

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N214G214GggCggT40354182All0.000772
N214G214GggCggT14221422AY.260.040257
N214G214GggCggT943947B.1.1.70.000844
N214G214GggCggT374377AY.40.000582
N214G214GggCggT309309B.1.5260.007263
N214G214GggCggT211211B.1.20.001858
N214G214GggCggT6482B.1.617.20.000241
N214G214GggCggT7275B.10.000659
N214G214GggCggT142AY.530.000288
N214G214GggCggT4141AY.9.10.003433
N214G214GggCggT3838AY.250.000229
N214G214GggCggT2933AY.1030.00018
N214G214GggCggT3131B.1.1.3060.013591
N214G214GggCggT227AY.290.000032
N214G214GggCggT1927AY.440.000116
N214G214GggCggT2626B.1.177.520.045694
N214G214GggCggT2525B.1.258.170.002599
N214G214GggCggT2323AY.30.000229
N214G214GggCggT2020B.1.1770.000263
N214G214GggCggT1920B.1.2210.00135
N214G214GggCggT1717AY.740.001966
N214G214GggCggT1616AY.390.000395
N214G214GggCggT1616AY.430.000071
N214G214GggCggT1616B.1.1600.000499
N214G214GggCggT1415B.1.10.000254
N214G214GggCggT1313AY.1000.000598
N214G214GggCggT1212B.1.1.3030.033149
N214G214GggCggT1212B.1.177.860.002201
N214G214GggCggT1112P.10.000173
N214G214GggCggT1111B0.001406
N214G214GggCggT1111R.10.00099
N214G214GggCggT99B.1.3510.000268
N214G214GggCggT88AY.39.10.000317
N214G214GggCggT88B.1.1.2140.000444
N214G214GggCggT77AY.1130.000997
N214G214GggCggT37AY.460.000312
N214G214GggCggT37AY.470.000093
N214G214GggCggT77AY.50.000145
N214G214GggCggT77B.1.5090.006061
N214G214GggCggT56AY.420.000201
N214G214GggCggT66B.1.4290.000141
N214G214GggCggT66P.30.009569
N214G214GggCggT45AY.1020.000106
N214G214GggCggT55AY.46.60.000361
N214G214GggCggT55AY.9.20.000184
N214G214GggCggT55B.1.2580.000333
N214G214GggCggT55B.1.351.20.001513
N214G214GggCggT55C.10.011962
N214G214GggCggT44AY.750.000224
N214G214GggCggT44B.1.177.560.00267
N214G214GggCggT44B.1.4270.000202
N214G214GggCggT24B.1.6210.000177
N214G214GggCggT13AY.5.30.000337
N214G214GggCggT33AY.610.000314
N214G214GggCggT33AY.830.005172
N214G214GggCggT33AY.90.000203
N214G214GggCggT33AY.98.10.000145
N214G214GggCggT33B.1.4090.002344
N214G214GggCggT33B.1.5960.000261
N214G214GggCggT33B.1.6190.002613
N214G214GggCggT22A0.000774
N214G214GggCggT22AY.190.002281
N214G214GggCggT22AY.340.000194
N214G214GggCggT22AY.4.20.000043
N214G214GggCggT22AY.690.000373
N214G214GggCggT22AY.75.10.000361
N214G214GggCggT22AY.99.20.000184
N214G214GggCggT22B.1.1.10.000653
N214G214GggCggT22B.1.1.1710.007353
N214G214GggCggT22B.1.1.3170.000823
N214G214GggCggT22B.1.2340.000264
N214G214GggCggT22B.1.2430.000139
N214G214GggCggT22B.1.3110.000549
N214G214GggCggT22B.1.360.000292
N214G214GggCggT22B.1.36.240.012346
N214G214GggCggT22B.1.416.10.003125
N214G214GggCggT12B.1.6280.000352
N214G214GggCggT22P.1.150.000465
N214G214GggCggT11AD.20.000219
N214G214GggCggT11AY.116.10.000311
N214G214GggCggT11AY.1170.000085
N214G214GggCggT11AY.1180.000063
N214G214GggCggT11AY.1200.000037
N214G214GggCggT11AY.140.000088
N214G214GggCggT11AY.200.000039
N214G214GggCggT11AY.320.000532
N214G214GggCggT11AY.4.50.000107
N214G214GggCggT11AY.480.000465
N214G214GggCggT11AY.5.10.003759
N214G214GggCggT11AY.5.40.000277
N214G214GggCggT11AY.550.000917
N214G214GggCggT11AY.590.00053
N214G214GggCggT11AY.620.000436
N214G214GggCggT11AY.640.000595
N214G214GggCggT11AY.680.000274
N214G214GggCggT11AY.710.000475
N214G214GggCggT11AY.9.2.10.001976
N214G214GggCggT11AY.930.000273
N214G214GggCggT11B.1.1.1590.004673
N214G214GggCggT11B.1.1.2210.010101
N214G214GggCggT11B.1.1.250.000569
N214G214GggCggT11B.1.1.2630.001558
N214G214GggCggT11B.1.1.280.000311
N214G214GggCggT11B.1.1.3110.000358
N214G214GggCggT11B.1.1.3480.000796
N214G214GggCggT11B.1.1.4180.022727
N214G214GggCggT11B.1.1.5170.006803
N214G214GggCggT11B.1.1570.002985
N214G214GggCggT11B.1.177.80.000752
N214G214GggCggT11B.1.177.830.001481
N214G214GggCggT11B.1.1950.005025
N214G214GggCggT11B.1.2400.000216
N214G214GggCggT11B.1.36.200.016949
N214G214GggCggT11B.1.36.220.001208
N214G214GggCggT11B.1.36.310.001751
N214G214GggCggT11B.1.3690.000285
N214G214GggCggT11B.1.4000.000429
N214G214GggCggT11B.1.5600.00463
N214G214GggCggT11B.1.5820.000491
N214G214GggCggT11B.1.6200.000946
N214G214GggCggT11B.1.6370.000073
N214G214GggCggT11C.160.00106
N214G214GggCggT11C.36.30.000567
N214G214GggCggT11C.60.037037
N214G214GggCggT11N.20.038462
N214G214GggCggT11P.1.140.000048

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

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