CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
N | 209 | R209I | nonsyn | aGa | aTa | 9777 | 9777 | 1 | 28898-28900 | |
N | 209 | R209G | nonsyn | Aga | Gga | 7195 | 7194 | 0.999861 | 28898-28900 | |
N | 209 | R209G | nonsyn | AgA | GgG | 7195 | 1 | 0.000138985 | 28898-28900 | |
N | 209 | R209K | nonsyn | aGa | aAa | 1665 | 1665 | 1 | 28898-28900 | |
N | 209 | R209del | del | AGA | --- | 1019 | 1019 | 1 | 28898-28900 | |
N | 209 | R209R | syn | agA | agG | 964 | 894 | 0.927386 | 28898-28900 | |
N | 209 | R209R | syn | Aga | Cga | 964 | 70 | 0.0726141 | 28898-28900 | |
N | 209 | R209S | nonsyn | agA | agC | 801 | 560 | 0.699126 | 28898-28900 | |
N | 209 | R209S | nonsyn | agA | agT | 801 | 241 | 0.300874 | 28898-28900 | |
N | 209 | R209T | nonsyn | aGa | aCa | 732 | 732 | 1 | 28898-28900 | |
N | 209 | R209del2 | del | aGA | a-- | 33 | 23 | 0.69697 | 28898-28900 | |
N | 209 | R209del2 | del | AGa | --a | 33 | 5 | 0.151515 | 28898-28900 | |
N | 209 | R209del2 | del | AGA | --N | 33 | 5 | 0.151515 | 28898-28900 | |
N | 209 | R209X | nonsyn | Aga | Tga | 17 | 16 | 0.941176 | 28898-28900 | |
N | 209 | R209X | nonsyn | AGa | TAa | 17 | 1 | 0.0588235 | 28898-28900 | |
N | 209 | R209del1 | del | aGa | a-a | 14 | 5 | 0.357143 | 28898-28900 | |
N | 209 | R209del1 | del | AGa | -Ca | 14 | 4 | 0.285714 | 28898-28900 | |
N | 209 | R209del1 | del | agA | ag- | 14 | 3 | 0.214286 | 28898-28900 | |
N | 209 | R209del1 | del | aGA | a-N | 14 | 1 | 0.0714286 | 28898-28900 | |
N | 209 | R209del1 | del | Aga | -ga | 14 | 1 | 0.0714286 | 28898-28900 | |
N | 209 | R209E | nonsyn | AGa | GAa | 6 | 5 | 0.833333 | 28898-28900 | |
N | 209 | R209E | nonsyn | AGA | GAG | 6 | 1 | 0.166667 | 28898-28900 | |
N | 209 | R209P | nonsyn | AGa | CCa | 1 | 1 | 1 | 28898-28900 | |
N | 209 | R209N | nonsyn | aGA | aAT | 1 | 1 | 1 | 28898-28900 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
N | 209 | R209I | aGa | aTa | 9777 | 9777 | All | 0.00187 |
N | 209 | R209G | Aga | Gga | 7194 | 7195 | All | 0.001376 |
N | 209 | R209G | AgA | GgG | 1 | 7195 | All | 0 |
N | 209 | R209I | aGa | aTa | 4452 | 4452 | AY.70 | 0.928274 |
N | 209 | R209G | Aga | Gga | 3124 | 3124 | B.1.1.318 | 0.942667 |
N | 209 | R209K | aGa | aAa | 1665 | 1665 | All | 0.000318 |
N | 209 | R209G | Aga | Gga | 1186 | 1187 | AZ.2 | 0.973727 |
N | 209 | R209G | AgA | GgG | 1 | 1187 | AZ.2 | 0.000821 |
N | 209 | R209G | Aga | Gga | 1153 | 1153 | AZ.1 | 1 |
N | 209 | R209del | AGA | --- | 1019 | 1019 | All | 0.000195 |
N | 209 | R209R | agA | agG | 894 | 964 | All | 0.000171 |
N | 209 | R209R | Aga | Cga | 70 | 964 | All | 0.000013 |
N | 209 | R209I | aGa | aTa | 813 | 813 | B.1 | 0.007447 |
N | 209 | R209S | agA | agC | 560 | 801 | All | 0.000107 |
N | 209 | R209S | agA | agT | 241 | 801 | All | 0.000046 |
N | 209 | R209T | aGa | aCa | 732 | 732 | All | 0.00014 |
N | 209 | R209R | agA | agG | 681 | 681 | P.1.7 | 0.217433 |
N | 209 | R209G | Aga | Gga | 633 | 633 | AZ.3 | 0.962006 |
N | 209 | R209I | aGa | aTa | 478 | 478 | B.1.1.222 | 0.097511 |
N | 209 | R209I | aGa | aTa | 469 | 469 | B.1.516 | 0.917808 |
N | 209 | R209del | AGA | --- | 419 | 419 | B.1.1.7 | 0.000375 |
N | 209 | R209K | aGa | aAa | 361 | 361 | AY.29 | 0.005694 |
N | 209 | R209I | aGa | aTa | 326 | 326 | B.1.471 | 0.89071 |
N | 209 | R209K | aGa | aAa | 288 | 288 | B.1 | 0.002638 |
N | 209 | R209S | agA | agC | 147 | 285 | B.1.1.7 | 0.000132 |
N | 209 | R209S | agA | agT | 138 | 285 | B.1.1.7 | 0.000124 |
N | 209 | R209G | Aga | Gga | 279 | 279 | AZ.4 | 0.936242 |
N | 209 | R209G | Aga | Gga | 274 | 274 | AZ.5 | 0.961404 |
N | 209 | R209K | aGa | aAa | 260 | 260 | B.1.425 | 0.778443 |
N | 209 | R209I | aGa | aTa | 246 | 246 | B.1.258 | 0.016371 |
N | 209 | R209I | aGa | aTa | 217 | 217 | B.1.1.354 | 0.951754 |
N | 209 | R209S | agA | agC | 155 | 160 | AY.4 | 0.000241 |
N | 209 | R209S | agA | agT | 5 | 160 | AY.4 | 0.000008 |
N | 209 | R209I | aGa | aTa | 155 | 155 | B.1.617.2 | 0.000584 |
N | 209 | R209I | aGa | aTa | 147 | 147 | AY.4 | 0.000229 |
N | 209 | R209K | aGa | aAa | 141 | 141 | P.1 | 0.002221 |
N | 209 | R209I | aGa | aTa | 138 | 138 | B.1.306 | 0.788571 |
N | 209 | R209I | aGa | aTa | 138 | 138 | B.1.9.4 | 0.846626 |
N | 209 | R209I | aGa | aTa | 130 | 130 | B.1.1.7 | 0.000116 |
N | 209 | R209T | aGa | aCa | 126 | 126 | B.1.2 | 0.001109 |
N | 209 | R209G | Aga | Gga | 121 | 121 | AZ.2.1 | 0.98374 |
N | 209 | R209I | aGa | aTa | 120 | 120 | AY.43 | 0.000532 |
N | 209 | R209G | Aga | Gga | 118 | 118 | AZ.6 | 0.991597 |
N | 209 | R209I | aGa | aTa | 115 | 115 | B.1.637 | 0.008403 |
N | 209 | R209T | aGa | aCa | 111 | 111 | AY.43 | 0.000492 |
N | 209 | R209G | Aga | Gga | 108 | 108 | B.1.1.7 | 0.000097 |
N | 209 | R209I | aGa | aTa | 105 | 105 | B.1.336 | 0.256098 |
N | 209 | R209K | aGa | aAa | 104 | 104 | AY.4 | 0.000162 |
N | 209 | R209K | aGa | aAa | 96 | 96 | B.1.2 | 0.000845 |
N | 209 | R209I | aGa | aTa | 94 | 94 | B.1.390 | 1 |
N | 209 | R209del | AGA | --- | 75 | 75 | AY.103 | 0.000466 |
N | 209 | R209T | aGa | aCa | 68 | 68 | B.1.1.7 | 0.000061 |
N | 209 | R209I | aGa | aTa | 68 | 68 | B.1.2 | 0.000599 |
N | 209 | R209I | aGa | aTa | 63 | 63 | AY.103 | 0.000391 |
N | 209 | R209I | aGa | aTa | 63 | 63 | B.1.1 | 0.001143 |
N | 209 | R209I | aGa | aTa | 62 | 62 | B.1.429 | 0.001459 |
N | 209 | R209S | agA | agC | 61 | 61 | B.1.36.23 | 1 |
N | 209 | R209T | aGa | aCa | 57 | 57 | B.1 | 0.000522 |
N | 209 | R209I | aGa | aTa | 56 | 56 | AY.5 | 0.001156 |
N | 209 | R209T | aGa | aCa | 54 | 54 | AY.4 | 0.000084 |
N | 209 | R209S | agA | agC | 52 | 52 | D.2 | 0.003902 |
N | 209 | R209K | aGa | aAa | 51 | 51 | B.1.1.519 | 0.002025 |
N | 209 | R209I | aGa | aTa | 50 | 50 | B.1.240 | 0.010778 |
N | 209 | R209S | agA | agT | 41 | 43 | AY.4.2 | 0.000889 |
N | 209 | R209S | agA | agC | 2 | 43 | AY.4.2 | 0.000043 |
N | 209 | R209del | AGA | --- | 42 | 42 | AY.4 | 0.000065 |
N | 209 | R209del | AGA | --- | 42 | 42 | AY.70 | 0.008757 |
N | 209 | R209R | Aga | Cga | 31 | 40 | AY.4 | 0.000048 |
N | 209 | R209R | agA | agG | 9 | 40 | AY.4 | 0.000014 |
N | 209 | R209I | aGa | aTa | 40 | 40 | B.1.1.370 | 0.506329 |
N | 209 | R209I | aGa | aTa | 40 | 40 | B.1.621 | 0.003541 |
N | 209 | R209T | aGa | aCa | 39 | 39 | AY.103 | 0.000242 |
N | 209 | R209del | AGA | --- | 38 | 38 | B.1.1 | 0.000689 |
N | 209 | R209del | AGA | --- | 37 | 37 | AY.118 | 0.002318 |
N | 209 | R209G | Aga | Gga | 37 | 37 | B.1.1 | 0.000671 |
N | 209 | R209I | aGa | aTa | 36 | 36 | AY.41 | 0.010582 |
N | 209 | R209I | aGa | aTa | 36 | 36 | AY.44 | 0.000219 |
N | 209 | R209K | aGa | aAa | 35 | 35 | B.1.1 | 0.000635 |
N | 209 | R209R | agA | agG | 25 | 35 | B.1.1.7 | 0.000022 |
N | 209 | R209R | Aga | Cga | 10 | 35 | B.1.1.7 | 0.000009 |
N | 209 | R209I | aGa | aTa | 35 | 35 | B.1.551 | 0.045161 |
N | 209 | R209del | AGA | --- | 34 | 34 | B.1.1.93 | 0.871795 |
N | 209 | R209I | aGa | aTa | 34 | 34 | B.1.478 | 0.4 |
N | 209 | R209T | aGa | aCa | 34 | 34 | B.1.526 | 0.000799 |
N | 209 | R209del2 | aGA | a-- | 23 | 33 | All | 0.000004 |
N | 209 | R209del2 | AGa | --a | 5 | 33 | All | 0.000001 |
N | 209 | R209del2 | AGA | --N | 5 | 33 | All | 0.000001 |
N | 209 | R209del | AGA | --- | 31 | 31 | B.1.1.370 | 0.392405 |
N | 209 | R209I | aGa | aTa | 30 | 30 | B.1.526 | 0.000705 |
N | 209 | R209R | agA | agG | 27 | 29 | B.1.617.2 | 0.000102 |
N | 209 | R209R | Aga | Cga | 2 | 29 | B.1.617.2 | 0.000008 |
N | 209 | R209I | aGa | aTa | 28 | 28 | AY.3 | 0.000278 |
N | 209 | R209I | aGa | aTa | 27 | 27 | AY.25 | 0.000162 |
N | 209 | R209I | aGa | aTa | 27 | 27 | B.1.258.17 | 0.002807 |
N | 209 | R209I | aGa | aTa | 26 | 26 | B.1.192 | 0.240741 |
N | 209 | R209S | agA | agC | 20 | 25 | AY.25 | 0.00012 |
N | 209 | R209S | agA | agT | 5 | 25 | AY.25 | 0.00003 |
N | 209 | R209I | aGa | aTa | 25 | 25 | AY.47 | 0.000778 |
N | 209 | R209I | aGa | aTa | 25 | 25 | B.1.177 | 0.000329 |
N | 209 | R209I | aGa | aTa | 25 | 25 | B.1.177.30 | 0.062814 |
N | 209 | R209I | aGa | aTa | 25 | 25 | B.1.595 | 0.006524 |
N | 209 | R209I | aGa | aTa | 24 | 24 | AY.9 | 0.001622 |
N | 209 | R209I | aGa | aTa | 24 | 24 | B.1.1.269 | 0.032476 |
N | 209 | R209K | aGa | aAa | 24 | 24 | B.1.221.1 | 0.069767 |
N | 209 | R209K | aGa | aAa | 22 | 22 | B.1.221 | 0.001563 |
N | 209 | R209I | aGa | aTa | 22 | 22 | B.1.558 | 0.100457 |
N | 209 | R209K | aGa | aAa | 21 | 21 | B.1.351 | 0.000624 |
N | 209 | R209T | aGa | aCa | 21 | 21 | B.1.617.2 | 0.000079 |
N | 209 | R209del | AGA | --- | 20 | 20 | AY.25 | 0.00012 |
N | 209 | R209del | AGA | --- | 20 | 20 | B.1.177 | 0.000263 |
N | 209 | R209I | aGa | aTa | 19 | 19 | B | 0.002428 |
N | 209 | R209K | aGa | aAa | 19 | 19 | B.1.177.86 | 0.003486 |
N | 209 | R209del | AGA | --- | 18 | 18 | AY.43 | 0.00008 |
N | 209 | R209I | aGa | aTa | 18 | 18 | AY.9.1 | 0.001507 |
N | 209 | R209G | Aga | Gga | 18 | 18 | B.1.1.222 | 0.003672 |
N | 209 | R209G | Aga | Gga | 18 | 18 | B.1.1.437 | 0.1875 |
N | 209 | R209I | aGa | aTa | 18 | 18 | B.1.427 | 0.000909 |
N | 209 | R209X | Aga | Tga | 16 | 17 | All | 0.000003 |
N | 209 | R209X | AGa | TAa | 1 | 17 | All | 0 |
N | 209 | R209I | aGa | aTa | 17 | 17 | AY.23 | 0.001186 |
N | 209 | R209del | AGA | --- | 17 | 17 | AY.3 | 0.000169 |
N | 209 | R209del | AGA | --- | 17 | 17 | AY.44 | 0.000103 |
N | 209 | R209I | aGa | aTa | 16 | 16 | AY.46.5 | 0.003175 |
N | 209 | R209R | agA | agG | 16 | 16 | B.1.2 | 0.000141 |
N | 209 | R209S | agA | agC | 14 | 15 | AY.99.2 | 0.00129 |
N | 209 | R209S | agA | agT | 1 | 15 | AY.99.2 | 0.000092 |
N | 209 | R209R | agA | agG | 15 | 15 | B.1.1.317 | 0.006175 |
N | 209 | R209I | aGa | aTa | 15 | 15 | B.1.428.3 | 0.192308 |
N | 209 | R209del1 | aGa | a-a | 5 | 14 | All | 0.000001 |
N | 209 | R209del1 | AGa | -Ca | 4 | 14 | All | 0.000001 |
N | 209 | R209del1 | agA | ag- | 3 | 14 | All | 0.000001 |
N | 209 | R209del1 | Aga | -ga | 1 | 14 | All | 0 |
N | 209 | R209del1 | aGA | a-N | 1 | 14 | All | 0 |
N | 209 | R209K | aGa | aAa | 14 | 14 | AY.113 | 0.001993 |
N | 209 | R209S | agA | agT | 14 | 14 | AY.120 | 0.000521 |
N | 209 | R209I | aGa | aTa | 14 | 14 | AY.20 | 0.000544 |
N | 209 | R209I | aGa | aTa | 14 | 14 | AY.26 | 0.000396 |
N | 209 | R209S | agA | agC | 10 | 14 | AY.43 | 0.000044 |
N | 209 | R209S | agA | agT | 4 | 14 | AY.43 | 0.000018 |
N | 209 | R209del | AGA | --- | 14 | 14 | B.1 | 0.000128 |
N | 209 | R209T | aGa | aCa | 14 | 14 | B.1.1.306 | 0.006138 |
N | 209 | R209I | aGa | aTa | 14 | 14 | B.1.1.519 | 0.000556 |
N | 209 | R209I | aGa | aTa | 14 | 14 | B.1.177.60 | 0.003058 |
N | 209 | R209del | AGA | --- | 14 | 14 | B.1.617.2 | 0.000053 |
N | 209 | R209I | aGa | aTa | 13 | 13 | AY.102 | 0.000345 |
N | 209 | R209T | aGa | aCa | 13 | 13 | AY.25 | 0.000078 |
N | 209 | R209I | aGa | aTa | 13 | 13 | AY.61 | 0.001362 |
N | 209 | R209del | AGA | --- | 13 | 13 | AY.99.2 | 0.001198 |
N | 209 | R209I | aGa | aTa | 13 | 13 | B.1.1.311 | 0.004656 |
N | 209 | R209K | aGa | aAa | 13 | 13 | B.1.1.7 | 0.000012 |
N | 209 | R209I | aGa | aTa | 13 | 13 | B.1.160 | 0.000405 |
N | 209 | R209I | aGa | aTa | 13 | 13 | B.1.189 | 0.055794 |
N | 209 | R209K | aGa | aAa | 13 | 13 | B.1.617.2 | 0.000049 |
N | 209 | R209S | agA | agC | 10 | 13 | B.1.617.2 | 0.000038 |
N | 209 | R209S | agA | agT | 3 | 13 | B.1.617.2 | 0.000011 |
N | 209 | R209S | agA | agC | 10 | 12 | AY.103 | 0.000062 |
N | 209 | R209S | agA | agT | 2 | 12 | AY.103 | 0.000012 |
N | 209 | R209R | Aga | Cga | 10 | 12 | AY.3 | 0.000099 |
N | 209 | R209R | agA | agG | 2 | 12 | AY.3 | 0.00002 |
N | 209 | R209I | aGa | aTa | 12 | 12 | AY.39 | 0.000297 |
N | 209 | R209I | aGa | aTa | 12 | 12 | AY.75 | 0.000672 |
N | 209 | R209del | AGA | --- | 12 | 12 | B.1.1.519 | 0.000477 |
N | 209 | R209I | aGa | aTa | 12 | 12 | B.1.560 | 0.055556 |
N | 209 | R209I | aGa | aTa | 12 | 12 | B.1.596 | 0.001046 |
N | 209 | R209R | agA | agG | 10 | 11 | AY.33 | 0.000668 |
N | 209 | R209R | Aga | Cga | 1 | 11 | AY.33 | 0.000067 |
N | 209 | R209T | aGa | aCa | 11 | 11 | AY.44 | 0.000067 |
N | 209 | R209S | agA | agC | 10 | 11 | B.1.1 | 0.000181 |
N | 209 | R209S | agA | agT | 1 | 11 | B.1.1 | 0.000018 |
N | 209 | R209I | aGa | aTa | 11 | 11 | B.1.234 | 0.001451 |
N | 209 | R209K | aGa | aAa | 11 | 11 | B.1.503 | 0.027363 |
N | 209 | R209I | aGa | aTa | 10 | 10 | A | 0.00387 |
N | 209 | R209T | aGa | aCa | 10 | 10 | AY.113 | 0.001424 |
N | 209 | R209del2 | aGA | a-- | 7 | 10 | AY.4 | 0.000011 |
N | 209 | R209del2 | AGA | --N | 3 | 10 | AY.4 | 0.000005 |
N | 209 | R209S | agA | agC | 10 | 10 | B.1 | 0.000092 |
N | 209 | R209G | Aga | Gga | 9 | 9 | AT.1 | 0.046154 |
N | 209 | R209I | aGa | aTa | 9 | 9 | B.1.221 | 0.000639 |
N | 209 | R209R | agA | agG | 9 | 9 | B.1.258 | 0.000599 |
N | 209 | R209R | agA | agG | 9 | 9 | B.1.351 | 0.000268 |
N | 209 | R209I | aGa | aTa | 9 | 9 | B.1.509 | 0.007792 |
N | 209 | R209G | Aga | Gga | 9 | 9 | P.1 | 0.000142 |
N | 209 | R209I | aGa | aTa | 8 | 8 | AY.119 | 0.000282 |
N | 209 | R209del | AGA | --- | 8 | 8 | AY.21 | 0.01518 |
N | 209 | R209T | aGa | aCa | 8 | 8 | AY.4.5 | 0.00086 |
N | 209 | R209I | aGa | aTa | 8 | 8 | AY.46 | 0.000833 |
N | 209 | R209I | aGa | aTa | 8 | 8 | AY.86 | 0.006639 |
N | 209 | R209R | agA | agG | 8 | 8 | B.1.1.28 | 0.00249 |
N | 209 | R209K | aGa | aAa | 8 | 8 | B.1.177.42 | 0.007156 |
N | 209 | R209I | aGa | aTa | 8 | 8 | B.1.210 | 0.017058 |
N | 209 | R209I | aGa | aTa | 8 | 8 | B.1.241 | 0.006494 |
N | 209 | R209del | AGA | --- | 8 | 8 | B.1.336 | 0.019512 |
N | 209 | R209I | aGa | aTa | 8 | 8 | B.1.36.1 | 0.009122 |
N | 209 | R209R | agA | agG | 7 | 7 | AY.103 | 0.000043 |
N | 209 | R209I | aGa | aTa | 7 | 7 | AY.107 | 0.003262 |
N | 209 | R209T | aGa | aCa | 7 | 7 | AY.3 | 0.00007 |
N | 209 | R209G | Aga | Gga | 7 | 7 | AY.4 | 0.000011 |
N | 209 | R209I | aGa | aTa | 7 | 7 | B.1.111 | 0.008226 |
N | 209 | R209K | aGa | aAa | 7 | 7 | B.1.177 | 0.000092 |
N | 209 | R209del | AGA | --- | 7 | 7 | B.1.177.21 | 0.000535 |
N | 209 | R209K | aGa | aAa | 7 | 7 | B.1.243 | 0.000487 |
N | 209 | R209I | aGa | aTa | 7 | 7 | B.1.36.17 | 0.003458 |
N | 209 | R209I | aGa | aTa | 7 | 7 | B.1.606 | 0.042169 |
N | 209 | R209R | agA | agG | 7 | 7 | P.1 | 0.00011 |
N | 209 | R209T | aGa | aCa | 7 | 7 | P.1.4 | 0.006836 |
N | 209 | R209E | AGa | GAa | 5 | 6 | All | 0.000001 |
N | 209 | R209E | AGA | GAG | 1 | 6 | All | 0 |
N | 209 | R209del | AGA | --- | 6 | 6 | AY.100 | 0.000276 |
N | 209 | R209G | Aga | Gga | 6 | 6 | AY.44 | 0.000037 |
N | 209 | R209S | agA | agC | 6 | 6 | AY.44 | 0.000037 |
N | 209 | R209I | aGa | aTa | 6 | 6 | AY.7.2 | 0.003356 |
N | 209 | R209R | agA | agG | 6 | 6 | AY.73 | 0.003992 |
N | 209 | R209T | aGa | aCa | 6 | 6 | AY.9 | 0.000406 |
N | 209 | R209I | aGa | aTa | 6 | 6 | AY.98.1 | 0.000291 |
N | 209 | R209G | Aga | Gga | 6 | 6 | B.1 | 0.000055 |
N | 209 | R209T | aGa | aCa | 6 | 6 | B.1.1 | 0.000109 |
N | 209 | R209I | aGa | aTa | 6 | 6 | B.1.1.170 | 0.007481 |
N | 209 | R209T | aGa | aCa | 6 | 6 | B.1.1.519 | 0.000238 |
N | 209 | R209G | Aga | Gga | 6 | 6 | B.1.1.519 | 0.000238 |
N | 209 | R209I | aGa | aTa | 6 | 6 | B.1.409 | 0.004687 |
N | 209 | R209T | aGa | aCa | 6 | 6 | B.1.558 | 0.027397 |
N | 209 | R209T | aGa | aCa | 6 | 6 | B.1.595 | 0.001566 |
N | 209 | R209I | aGa | aTa | 6 | 6 | B.1.617.1 | 0.000774 |
N | 209 | R209G | Aga | Gga | 6 | 6 | B.1.617.2 | 0.000023 |
N | 209 | R209del | AGA | --- | 6 | 6 | D.2 | 0.00045 |
N | 209 | R209K | aGa | aAa | 6 | 6 | P.1.14 | 0.000287 |
N | 209 | R209del | AGA | --- | 6 | 6 | Q.8 | 0.000989 |
N | 209 | R209I | aGa | aTa | 5 | 5 | A.2.5 | 0.002495 |
N | 209 | R209I | aGa | aTa | 5 | 5 | AY.100 | 0.00023 |
N | 209 | R209R | agA | agG | 5 | 5 | AY.100 | 0.00023 |
N | 209 | R209I | aGa | aTa | 5 | 5 | AY.116 | 0.001434 |
N | 209 | R209del | AGA | --- | 5 | 5 | AY.27 | 0.000324 |
N | 209 | R209G | Aga | Gga | 5 | 5 | AY.3 | 0.00005 |
N | 209 | R209del2 | AGa | --a | 3 | 5 | AY.3 | 0.00003 |
N | 209 | R209del2 | aGA | a-- | 2 | 5 | AY.3 | 0.00002 |
N | 209 | R209K | aGa | aAa | 5 | 5 | AY.33 | 0.000334 |
N | 209 | R209I | aGa | aTa | 5 | 5 | AY.33 | 0.000334 |
N | 209 | R209R | agA | agG | 4 | 5 | AY.42 | 0.000161 |
N | 209 | R209R | Aga | Cga | 1 | 5 | AY.42 | 0.00004 |
N | 209 | R209I | aGa | aTa | 5 | 5 | AY.46.6 | 0.000361 |
N | 209 | R209I | aGa | aTa | 5 | 5 | AY.71 | 0.002375 |
N | 209 | R209K | aGa | aAa | 5 | 5 | AY.79 | 0.006053 |
N | 209 | R209R | agA | agG | 5 | 5 | B.1 | 0.000046 |
N | 209 | R209K | aGa | aAa | 5 | 5 | B.1.160 | 0.000156 |
N | 209 | R209I | aGa | aTa | 5 | 5 | B.1.177.72 | 0.016949 |
N | 209 | R209T | aGa | aCa | 5 | 5 | B.1.480 | 0.012438 |
N | 209 | R209I | aGa | aTa | 5 | 5 | B.1.545 | 0.072464 |
N | 209 | R209S | agA | agT | 5 | 5 | B.1.580 | 0.020325 |
N | 209 | R209I | aGa | aTa | 5 | 5 | B.1.609 | 0.002397 |
N | 209 | R209I | aGa | aTa | 5 | 5 | B.29 | 0.017544 |
N | 209 | R209I | aGa | aTa | 5 | 5 | B.40 | 0.001821 |
N | 209 | R209T | aGa | aCa | 5 | 5 | P.1 | 0.000079 |
N | 209 | R209R | agA | agG | 4 | 4 | A.2.5 | 0.001996 |
N | 209 | R209del | AGA | --- | 4 | 4 | AY.101 | 0.001962 |
N | 209 | R209del | AGA | --- | 4 | 4 | AY.102 | 0.000106 |
N | 209 | R209T | aGa | aCa | 4 | 4 | AY.102 | 0.000106 |
N | 209 | R209I | aGa | aTa | 4 | 4 | AY.120 | 0.000149 |
N | 209 | R209I | aGa | aTa | 4 | 4 | AY.121 | 0.000541 |
N | 209 | R209I | aGa | aTa | 4 | 4 | AY.13 | 0.000644 |
N | 209 | R209T | aGa | aCa | 4 | 4 | AY.2 | 0.001425 |
N | 209 | R209K | aGa | aAa | 4 | 4 | AY.29.1 | 0.000882 |
N | 209 | R209S | agA | agC | 4 | 4 | AY.3 | 0.00004 |
N | 209 | R209T | aGa | aCa | 4 | 4 | AY.33 | 0.000267 |
N | 209 | R209G | Aga | Gga | 4 | 4 | AY.43 | 0.000018 |
N | 209 | R209K | aGa | aAa | 4 | 4 | AY.44 | 0.000024 |
N | 209 | R209I | aGa | aTa | 4 | 4 | AY.45 | 0.000487 |
N | 209 | R209T | aGa | aCa | 4 | 4 | AY.46.6 | 0.000289 |
N | 209 | R209S | agA | agC | 4 | 4 | AY.5 | 0.000083 |
N | 209 | R209I | aGa | aTa | 4 | 4 | AY.50 | 0.003197 |
N | 209 | R209K | aGa | aAa | 4 | 4 | B.1.1.214 | 0.000222 |
N | 209 | R209del2 | aGA | a-- | 4 | 4 | B.1.1.519 | 0.000159 |
N | 209 | R209del1 | AGa | -Ca | 4 | 4 | B.1.1.7 | 0.000004 |
N | 209 | R209I | aGa | aTa | 4 | 4 | B.1.126 | 0.005102 |
N | 209 | R209S | agA | agC | 4 | 4 | B.1.177 | 0.000053 |
N | 209 | R209K | aGa | aAa | 4 | 4 | B.1.177.16 | 0.002658 |
N | 209 | R209K | aGa | aAa | 4 | 4 | B.1.199 | 0.016529 |
N | 209 | R209del | AGA | --- | 4 | 4 | B.1.2 | 0.000035 |
N | 209 | R209S | agA | agC | 3 | 4 | B.1.2 | 0.000026 |
N | 209 | R209S | agA | agT | 1 | 4 | B.1.2 | 0.000009 |
N | 209 | R209T | aGa | aCa | 4 | 4 | B.1.243 | 0.000278 |
N | 209 | R209I | aGa | aTa | 4 | 4 | B.1.324 | 0.006421 |
N | 209 | R209I | aGa | aTa | 4 | 4 | B.1.326 | 0.030303 |
N | 209 | R209I | aGa | aTa | 4 | 4 | B.1.351.3 | 0.003506 |
N | 209 | R209T | aGa | aCa | 4 | 4 | B.1.36 | 0.000584 |
N | 209 | R209I | aGa | aTa | 4 | 4 | B.1.36.29 | 0.002069 |
N | 209 | R209I | aGa | aTa | 4 | 4 | B.1.425 | 0.011976 |
N | 209 | R209I | aGa | aTa | 4 | 4 | B.1.459 | 0.016327 |
N | 209 | R209R | agA | agG | 4 | 4 | B.1.497 | 0.001259 |
N | 209 | R209S | agA | agT | 4 | 4 | B.1.503 | 0.00995 |
N | 209 | R209K | aGa | aAa | 4 | 4 | B.1.596 | 0.000349 |
N | 209 | R209I | aGa | aTa | 4 | 4 | B.1.84 | 0.083333 |
N | 209 | R209I | aGa | aTa | 4 | 4 | B.1.9 | 0.024691 |
N | 209 | R209I | aGa | aTa | 4 | 4 | B.1.9.5 | 0.022727 |
N | 209 | R209I | aGa | aTa | 4 | 4 | P.1 | 0.000063 |
N | 209 | R209I | aGa | aTa | 3 | 3 | A.28 | 0.007937 |
N | 209 | R209S | agA | agC | 3 | 3 | AY.117 | 0.000254 |
N | 209 | R209S | agA | agC | 3 | 3 | AY.118 | 0.000188 |
N | 209 | R209del | AGA | --- | 3 | 3 | AY.120 | 0.000112 |
N | 209 | R209del | AGA | --- | 3 | 3 | AY.20 | 0.000117 |
N | 209 | R209del | AGA | --- | 3 | 3 | AY.23 | 0.000209 |
N | 209 | R209del | AGA | --- | 3 | 3 | AY.26 | 0.000085 |
N | 209 | R209G | Aga | Gga | 3 | 3 | AY.26 | 0.000085 |
N | 209 | R209I | aGa | aTa | 3 | 3 | AY.29 | 0.000047 |
N | 209 | R209del | AGA | --- | 3 | 3 | AY.34 | 0.000291 |
N | 209 | R209S | agA | agC | 3 | 3 | AY.39 | 0.000074 |
N | 209 | R209del | AGA | --- | 3 | 3 | AY.39 | 0.000074 |
N | 209 | R209X | Aga | Tga | 3 | 3 | AY.4 | 0.000005 |
N | 209 | R209T | aGa | aCa | 3 | 3 | AY.4.2 | 0.000065 |
N | 209 | R209T | aGa | aCa | 3 | 3 | AY.4.2.1 | 0.000447 |
N | 209 | R209I | aGa | aTa | 3 | 3 | AY.4.5 | 0.000322 |
N | 209 | R209I | aGa | aTa | 3 | 3 | AY.42 | 0.000121 |
N | 209 | R209del2 | aGA | a-- | 2 | 3 | AY.43 | 0.000009 |
N | 209 | R209del2 | AGA | --N | 1 | 3 | AY.43 | 0.000004 |
N | 209 | R209I | aGa | aTa | 3 | 3 | AY.46.1 | 0.00308 |
N | 209 | R209R | agA | agG | 2 | 3 | AY.47 | 0.000062 |
N | 209 | R209R | Aga | Cga | 1 | 3 | AY.47 | 0.000031 |
N | 209 | R209T | aGa | aCa | 3 | 3 | AY.5 | 0.000062 |
N | 209 | R209K | aGa | aAa | 3 | 3 | AY.6 | 0.000123 |
N | 209 | R209R | agA | agG | 3 | 3 | AY.9.2 | 0.00011 |
N | 209 | R209I | aGa | aTa | 3 | 3 | AY.9.2 | 0.00011 |
N | 209 | R209X | Aga | Tga | 2 | 3 | B.1 | 0.000018 |
N | 209 | R209del1 | agA | ag- | 1 | 3 | B.1 | 0.000009 |
N | 209 | R209del1 | aGa | a-a | 1 | 3 | B.1 | 0.000009 |
N | 209 | R209X | AGa | TAa | 1 | 3 | B.1 | 0.000009 |
N | 209 | R209del1 | aGA | a-N | 1 | 3 | B.1 | 0.000009 |
N | 209 | R209K | aGa | aAa | 3 | 3 | B.1.1.12 | 0.022388 |
N | 209 | R209del | AGA | --- | 3 | 3 | B.1.1.170 | 0.003741 |
N | 209 | R209I | aGa | aTa | 3 | 3 | B.1.1.220 | 0.005576 |
N | 209 | R209K | aGa | aAa | 3 | 3 | B.1.1.222 | 0.000612 |
N | 209 | R209I | aGa | aTa | 3 | 3 | B.1.1.277 | 0.002276 |
N | 209 | R209E | AGa | GAa | 3 | 3 | B.1.1.318 | 0.000905 |
N | 209 | R209K | aGa | aAa | 3 | 3 | B.1.1.387 | 0.176471 |
N | 209 | R209R | agA | agG | 3 | 3 | B.1.1.4 | 0.008929 |
N | 209 | R209G | Aga | Gga | 3 | 3 | B.1.1.70 | 0.001023 |
N | 209 | R209R | agA | agG | 3 | 3 | B.1.177 | 0.00004 |
N | 209 | R209T | aGa | aCa | 3 | 3 | B.1.177 | 0.00004 |
N | 209 | R209K | aGa | aAa | 3 | 3 | B.1.177.56 | 0.002003 |
N | 209 | R209R | agA | agG | 3 | 3 | B.1.177.82 | 0.001432 |
N | 209 | R209G | Aga | Gga | 3 | 3 | B.1.2 | 0.000026 |
N | 209 | R209I | aGa | aTa | 3 | 3 | B.1.3 | 0.007853 |
N | 209 | R209I | aGa | aTa | 3 | 3 | B.1.351 | 0.000089 |
N | 209 | R209K | aGa | aAa | 3 | 3 | B.1.36.8 | 0.003 |
N | 209 | R209I | aGa | aTa | 3 | 3 | B.1.396 | 0.002117 |
N | 209 | R209I | aGa | aTa | 3 | 3 | B.1.398 | 0.008929 |
N | 209 | R209T | aGa | aCa | 3 | 3 | B.1.429 | 0.000071 |
N | 209 | R209I | aGa | aTa | 3 | 3 | B.1.468 | 0.017143 |
N | 209 | R209I | aGa | aTa | 3 | 3 | B.1.600 | 0.017544 |
N | 209 | R209I | aGa | aTa | 3 | 3 | B.1.635 | 0.052632 |
N | 209 | R209del | AGA | --- | 3 | 3 | B.40 | 0.001093 |
N | 209 | R209K | aGa | aAa | 3 | 3 | B.40 | 0.001093 |
N | 209 | R209T | aGa | aCa | 3 | 3 | B.6.6 | 0.002667 |
N | 209 | R209S | agA | agT | 3 | 3 | C.37 | 0.000348 |
N | 209 | R209K | aGa | aAa | 3 | 3 | P.1.1 | 0.000953 |
N | 209 | R209del | AGA | --- | 3 | 3 | Q.1 | 0.000379 |
N | 209 | R209I | aGa | aTa | 2 | 2 | A.1 | 0.000564 |
N | 209 | R209T | aGa | aCa | 2 | 2 | A.2.5 | 0.000998 |
N | 209 | R209I | aGa | aTa | 2 | 2 | A.2.5.1 | 0.009615 |
N | 209 | R209I | aGa | aTa | 2 | 2 | A.27 | 0.003311 |
N | 209 | R209S | agA | agC | 2 | 2 | AE.8 | 0.000978 |
N | 209 | R209T | aGa | aCa | 2 | 2 | AY.100 | 0.000092 |
N | 209 | R209I | aGa | aTa | 2 | 2 | AY.106 | 0.00067 |
N | 209 | R209I | aGa | aTa | 2 | 2 | AY.114 | 0.000462 |
N | 209 | R209G | Aga | Gga | 2 | 2 | AY.14 | 0.000176 |
N | 209 | R209I | aGa | aTa | 2 | 2 | AY.16.1 | 0.00094 |
N | 209 | R209R | agA | agG | 2 | 2 | AY.25 | 0.000012 |
N | 209 | R209G | Aga | Gga | 2 | 2 | AY.25 | 0.000012 |
N | 209 | R209R | Aga | Cga | 2 | 2 | AY.29 | 0.000032 |
N | 209 | R209G | Aga | Gga | 2 | 2 | AY.29 | 0.000032 |
N | 209 | R209del1 | agA | ag- | 1 | 2 | AY.3 | 0.00001 |
N | 209 | R209del1 | Aga | -ga | 1 | 2 | AY.3 | 0.00001 |
N | 209 | R209del | AGA | --- | 2 | 2 | AY.33 | 0.000134 |
N | 209 | R209I | aGa | aTa | 2 | 2 | AY.34 | 0.000194 |
N | 209 | R209T | aGa | aCa | 2 | 2 | AY.34 | 0.000194 |
N | 209 | R209K | aGa | aAa | 2 | 2 | AY.4.2 | 0.000043 |
N | 209 | R209T | aGa | aCa | 2 | 2 | AY.4.4 | 0.000818 |
N | 209 | R209del | AGA | --- | 2 | 2 | AY.4.5 | 0.000215 |
N | 209 | R209del | AGA | --- | 2 | 2 | AY.40 | 0.001929 |
N | 209 | R209K | aGa | aAa | 2 | 2 | AY.43 | 0.000009 |
N | 209 | R209R | agA | agG | 2 | 2 | AY.43 | 0.000009 |
N | 209 | R209K | aGa | aAa | 2 | 2 | AY.45 | 0.000243 |
N | 209 | R209T | aGa | aCa | 2 | 2 | AY.46.4 | 0.000329 |
N | 209 | R209del | AGA | --- | 2 | 2 | AY.5 | 0.000041 |
N | 209 | R209G | Aga | Gga | 2 | 2 | AY.5 | 0.000041 |
N | 209 | R209K | aGa | aAa | 2 | 2 | AY.5 | 0.000041 |
N | 209 | R209R | Aga | Cga | 1 | 2 | AY.5 | 0.000021 |
N | 209 | R209R | agA | agG | 1 | 2 | AY.5 | 0.000021 |
N | 209 | R209del | AGA | --- | 2 | 2 | AY.50 | 0.001599 |
N | 209 | R209I | aGa | aTa | 2 | 2 | AY.51 | 0.001818 |
N | 209 | R209I | aGa | aTa | 2 | 2 | AY.54 | 0.000191 |
N | 209 | R209I | aGa | aTa | 2 | 2 | AY.59 | 0.001059 |
N | 209 | R209I | aGa | aTa | 2 | 2 | AY.67 | 0.000929 |
N | 209 | R209I | aGa | aTa | 2 | 2 | AY.75.1 | 0.000361 |
N | 209 | R209I | aGa | aTa | 2 | 2 | AY.84 | 0.000875 |
N | 209 | R209G | Aga | Gga | 2 | 2 | AY.88 | 0.001768 |
N | 209 | R209R | Aga | Cga | 2 | 2 | AY.9 | 0.000135 |
N | 209 | R209K | aGa | aAa | 2 | 2 | AY.9.2 | 0.000073 |
N | 209 | R209G | Aga | Gga | 2 | 2 | AY.92 | 0.000575 |
N | 209 | R209T | aGa | aCa | 2 | 2 | AY.98.1 | 0.000097 |
N | 209 | R209S | agA | agT | 2 | 2 | AY.98.1 | 0.000097 |
N | 209 | R209E | AGa | GAa | 2 | 2 | AZ.2 | 0.001642 |
N | 209 | R209X | Aga | Tga | 2 | 2 | AZ.2 | 0.001642 |
N | 209 | R209R | agA | agG | 2 | 2 | B.1.1 | 0.000036 |
N | 209 | R209G | Aga | Gga | 2 | 2 | B.1.1.1 | 0.000653 |
N | 209 | R209G | Aga | Gga | 2 | 2 | B.1.1.142 | 0.035088 |
N | 209 | R209I | aGa | aTa | 2 | 2 | B.1.1.171 | 0.007353 |
N | 209 | R209I | aGa | aTa | 2 | 2 | B.1.1.189 | 0.003026 |
N | 209 | R209G | Aga | Gga | 2 | 2 | B.1.1.25 | 0.001137 |
N | 209 | R209del | AGA | --- | 2 | 2 | B.1.1.291 | 0.001485 |
N | 209 | R209I | aGa | aTa | 2 | 2 | B.1.1.294 | 0.002532 |
N | 209 | R209I | aGa | aTa | 2 | 2 | B.1.1.301 | 0.002358 |
N | 209 | R209del | AGA | --- | 2 | 2 | B.1.1.307 | 0.005063 |
N | 209 | R209K | aGa | aAa | 2 | 2 | B.1.1.312 | 0.003824 |
N | 209 | R209T | aGa | aCa | 2 | 2 | B.1.1.33 | 0.000842 |
N | 209 | R209R | agA | agG | 2 | 2 | B.1.1.366 | 0.031746 |
N | 209 | R209I | aGa | aTa | 2 | 2 | B.1.1.37 | 0.000386 |
N | 209 | R209G | Aga | Gga | 2 | 2 | B.1.1.416 | 0.00181 |
N | 209 | R209S | agA | agC | 2 | 2 | B.1.1.432 | 0.002532 |
N | 209 | R209I | aGa | aTa | 2 | 2 | B.1.1.514 | 0.076923 |
N | 209 | R209T | aGa | aCa | 2 | 2 | B.1.1.63 | 0.000772 |
N | 209 | R209I | aGa | aTa | 2 | 2 | B.1.128 | 0.001271 |
N | 209 | R209I | aGa | aTa | 2 | 2 | B.1.140 | 0.037736 |
N | 209 | R209K | aGa | aAa | 2 | 2 | B.1.177.44 | 0.001038 |
N | 209 | R209I | aGa | aTa | 2 | 2 | B.1.213 | 0.029851 |
N | 209 | R209I | aGa | aTa | 2 | 2 | B.1.243 | 0.000139 |
N | 209 | R209R | agA | agG | 2 | 2 | B.1.243 | 0.000139 |
N | 209 | R209del1 | aGa | a-a | 2 | 2 | B.1.247 | 0.029851 |
N | 209 | R209T | aGa | aCa | 2 | 2 | B.1.258 | 0.000133 |
N | 209 | R209K | aGa | aAa | 2 | 2 | B.1.258.10 | 0.022727 |
N | 209 | R209K | aGa | aAa | 2 | 2 | B.1.258.3 | 0.00335 |
N | 209 | R209I | aGa | aTa | 2 | 2 | B.1.279 | 0.001027 |
N | 209 | R209I | aGa | aTa | 2 | 2 | B.1.332 | 0.006993 |
N | 209 | R209I | aGa | aTa | 2 | 2 | B.1.334 | 0.036364 |
N | 209 | R209G | Aga | Gga | 2 | 2 | B.1.336 | 0.004878 |
N | 209 | R209del | AGA | --- | 2 | 2 | B.1.351 | 0.000059 |
N | 209 | R209I | aGa | aTa | 2 | 2 | B.1.351.2 | 0.000605 |
N | 209 | R209del | AGA | --- | 2 | 2 | B.1.351.2 | 0.000605 |
N | 209 | R209K | aGa | aAa | 2 | 2 | B.1.36.29 | 0.001035 |
N | 209 | R209I | aGa | aTa | 2 | 2 | B.1.362 | 0.003082 |
N | 209 | R209I | aGa | aTa | 2 | 2 | B.1.380 | 0.013245 |
N | 209 | R209K | aGa | aAa | 2 | 2 | B.1.409 | 0.001563 |
N | 209 | R209T | aGa | aCa | 2 | 2 | B.1.416 | 0.002538 |
N | 209 | R209K | aGa | aAa | 2 | 2 | B.1.422 | 0.001625 |
N | 209 | R209I | aGa | aTa | 2 | 2 | B.1.466.2 | 0.000782 |
N | 209 | R209K | aGa | aAa | 2 | 2 | B.1.468 | 0.011429 |
N | 209 | R209K | aGa | aAa | 2 | 2 | B.1.470 | 0.002809 |
N | 209 | R209del | AGA | --- | 2 | 2 | B.1.517 | 0.000854 |
N | 209 | R209T | aGa | aCa | 2 | 2 | B.1.517.1 | 0.010526 |
N | 209 | R209T | aGa | aCa | 2 | 2 | B.1.525 | 0.000226 |
N | 209 | R209I | aGa | aTa | 2 | 2 | B.1.561 | 0.000794 |
N | 209 | R209S | agA | agC | 2 | 2 | B.1.564 | 0.000852 |
N | 209 | R209I | aGa | aTa | 2 | 2 | B.1.564.1 | 0.003155 |
N | 209 | R209K | aGa | aAa | 2 | 2 | B.1.582 | 0.000981 |
N | 209 | R209S | agA | agT | 2 | 2 | B.1.582 | 0.000981 |
N | 209 | R209T | aGa | aCa | 2 | 2 | B.1.621.1 | 0.001012 |
N | 209 | R209I | aGa | aTa | 2 | 2 | B.28 | 0.006557 |
N | 209 | R209K | aGa | aAa | 2 | 2 | D.2 | 0.00015 |
N | 209 | R209G | Aga | Gga | 2 | 2 | D.2 | 0.00015 |
N | 209 | R209R | agA | agG | 2 | 2 | P.1.10 | 0.000539 |
N | 209 | R209I | aGa | aTa | 2 | 2 | P.1.10 | 0.000539 |
N | 209 | R209K | aGa | aAa | 2 | 2 | P.1.12 | 0.000968 |
N | 209 | R209R | agA | agG | 2 | 2 | P.1.12 | 0.000968 |
N | 209 | R209del | AGA | --- | 2 | 2 | P.1.14 | 0.000096 |
N | 209 | R209K | aGa | aAa | 2 | 2 | P.1.15 | 0.000465 |
N | 209 | R209K | aGa | aAa | 2 | 2 | P.1.17 | 0.000324 |
N | 209 | R209K | aGa | aAa | 2 | 2 | P.1.7 | 0.000639 |
N | 209 | R209I | aGa | aTa | 1 | 1 | 0.055556 | |
N | 209 | R209R | Aga | Cga | 1 | 1 | 0.055556 | |
N | 209 | R209T | aGa | aCa | 1 | 1 | 0.055556 | |
N | 209 | R209S | agA | agC | 1 | 1 | A | 0.000387 |
N | 209 | R209T | aGa | aCa | 1 | 1 | A.1 | 0.000282 |
N | 209 | R209I | aGa | aTa | 1 | 1 | A.2 | 0.000662 |
N | 209 | R209I | aGa | aTa | 1 | 1 | A.2.4 | 0.003367 |
N | 209 | R209T | aGa | aCa | 1 | 1 | A.21 | 0.00277 |
N | 209 | R209S | agA | agT | 1 | 1 | A.5 | 0.001923 |
N | 209 | R209N | aGA | aAT | 1 | 1 | All | 0 |
N | 209 | R209P | AGa | CCa | 1 | 1 | All | 0 |
N | 209 | R209K | aGa | aAa | 1 | 1 | AM.4 | 0.003571 |
N | 209 | R209K | aGa | aAa | 1 | 1 | AU.2 | 0.002421 |
N | 209 | R209S | agA | agC | 1 | 1 | AY.100 | 0.000046 |
N | 209 | R209K | aGa | aAa | 1 | 1 | AY.100 | 0.000046 |
N | 209 | R209S | agA | agC | 1 | 1 | AY.102 | 0.000027 |
N | 209 | R209K | aGa | aAa | 1 | 1 | AY.102 | 0.000027 |
N | 209 | R209G | Aga | Gga | 1 | 1 | AY.102 | 0.000027 |
N | 209 | R209K | aGa | aAa | 1 | 1 | AY.103 | 0.000006 |
N | 209 | R209T | aGa | aCa | 1 | 1 | AY.106 | 0.000335 |
N | 209 | R209del | AGA | --- | 1 | 1 | AY.110 | 0.000113 |
N | 209 | R209T | aGa | aCa | 1 | 1 | AY.110 | 0.000113 |
N | 209 | R209I | aGa | aTa | 1 | 1 | AY.113 | 0.000142 |
N | 209 | R209del | AGA | --- | 1 | 1 | AY.116 | 0.000287 |
N | 209 | R209G | Aga | Gga | 1 | 1 | AY.117 | 0.000085 |
N | 209 | R209T | aGa | aCa | 1 | 1 | AY.117 | 0.000085 |
N | 209 | R209del | AGA | --- | 1 | 1 | AY.117 | 0.000085 |
N | 209 | R209del2 | AGa | --a | 1 | 1 | AY.118 | 0.000063 |
N | 209 | R209I | aGa | aTa | 1 | 1 | AY.118 | 0.000063 |
N | 209 | R209S | agA | agT | 1 | 1 | AY.119 | 0.000035 |
N | 209 | R209del1 | aGa | a-a | 1 | 1 | AY.119 | 0.000035 |
N | 209 | R209K | aGa | aAa | 1 | 1 | AY.119 | 0.000035 |
N | 209 | R209T | aGa | aCa | 1 | 1 | AY.119 | 0.000035 |
N | 209 | R209S | agA | agC | 1 | 1 | AY.12 | 0.000316 |
N | 209 | R209K | aGa | aAa | 1 | 1 | AY.12 | 0.000316 |
N | 209 | R209R | Aga | Cga | 1 | 1 | AY.120 | 0.000037 |
N | 209 | R209T | aGa | aCa | 1 | 1 | AY.120 | 0.000037 |
N | 209 | R209G | Aga | Gga | 1 | 1 | AY.120 | 0.000037 |
N | 209 | R209S | agA | agT | 1 | 1 | AY.120.2 | 0.001285 |
N | 209 | R209T | aGa | aCa | 1 | 1 | AY.121 | 0.000135 |
N | 209 | R209del | AGA | --- | 1 | 1 | AY.121 | 0.000135 |
N | 209 | R209T | aGa | aCa | 1 | 1 | AY.13 | 0.000161 |
N | 209 | R209I | aGa | aTa | 1 | 1 | AY.16 | 0.00038 |
N | 209 | R209T | aGa | aCa | 1 | 1 | AY.16.1 | 0.00047 |
N | 209 | R209del2 | aGA | a-- | 1 | 1 | AY.16.1 | 0.00047 |
N | 209 | R209I | aGa | aTa | 1 | 1 | AY.2 | 0.000356 |
N | 209 | R209del2 | aGA | a-- | 1 | 1 | AY.20 | 0.000039 |
N | 209 | R209S | agA | agT | 1 | 1 | AY.20 | 0.000039 |
N | 209 | R209R | Aga | Cga | 1 | 1 | AY.20 | 0.000039 |
N | 209 | R209K | aGa | aAa | 1 | 1 | AY.20 | 0.000039 |
N | 209 | R209S | agA | agC | 1 | 1 | AY.23 | 0.00007 |
N | 209 | R209G | Aga | Gga | 1 | 1 | AY.23 | 0.00007 |
N | 209 | R209T | aGa | aCa | 1 | 1 | AY.23 | 0.00007 |
N | 209 | R209del | AGA | --- | 1 | 1 | AY.24 | 0.000431 |
N | 209 | R209I | aGa | aTa | 1 | 1 | AY.24 | 0.000431 |
N | 209 | R209T | aGa | aCa | 1 | 1 | AY.24 | 0.000431 |
N | 209 | R209R | agA | agG | 1 | 1 | AY.24 | 0.000431 |
N | 209 | R209X | Aga | Tga | 1 | 1 | AY.25 | 0.000006 |
N | 209 | R209del2 | aGA | a-- | 1 | 1 | AY.26 | 0.000028 |
N | 209 | R209del | AGA | --- | 1 | 1 | AY.29 | 0.000016 |
N | 209 | R209T | aGa | aCa | 1 | 1 | AY.29 | 0.000016 |
N | 209 | R209del | AGA | --- | 1 | 1 | AY.29.1 | 0.000221 |
N | 209 | R209I | aGa | aTa | 1 | 1 | AY.29.1 | 0.000221 |
N | 209 | R209X | Aga | Tga | 1 | 1 | AY.3 | 0.00001 |
N | 209 | R209T | aGa | aCa | 1 | 1 | AY.30 | 0.000396 |
N | 209 | R209X | Aga | Tga | 1 | 1 | AY.33 | 0.000067 |
N | 209 | R209S | agA | agC | 1 | 1 | AY.33 | 0.000067 |
N | 209 | R209R | agA | agG | 1 | 1 | AY.35 | 0.000233 |
N | 209 | R209I | aGa | aTa | 1 | 1 | AY.35 | 0.000233 |
N | 209 | R209T | aGa | aCa | 1 | 1 | AY.36 | 0.000148 |
N | 209 | R209I | aGa | aTa | 1 | 1 | AY.36 | 0.000148 |
N | 209 | R209X | Aga | Tga | 1 | 1 | AY.38 | 0.000499 |
N | 209 | R209del2 | aGA | a-- | 1 | 1 | AY.39 | 0.000025 |
N | 209 | R209T | aGa | aCa | 1 | 1 | AY.39 | 0.000025 |
N | 209 | R209K | aGa | aAa | 1 | 1 | AY.39 | 0.000025 |
N | 209 | R209T | aGa | aCa | 1 | 1 | AY.39.1.1 | 0.000725 |
N | 209 | R209del1 | agA | ag- | 1 | 1 | AY.4 | 0.000002 |
N | 209 | R209del | AGA | --- | 1 | 1 | AY.4.2 | 0.000022 |
N | 209 | R209R | agA | agG | 1 | 1 | AY.4.2 | 0.000022 |
N | 209 | R209I | aGa | aTa | 1 | 1 | AY.4.2 | 0.000022 |
N | 209 | R209del | AGA | --- | 1 | 1 | AY.4.2.1 | 0.000149 |
N | 209 | R209I | aGa | aTa | 1 | 1 | AY.4.4 | 0.000409 |
N | 209 | R209K | aGa | aAa | 1 | 1 | AY.4.5 | 0.000107 |
N | 209 | R209S | agA | agC | 1 | 1 | AY.41 | 0.000294 |
N | 209 | R209G | Aga | Gga | 1 | 1 | AY.42 | 0.00004 |
N | 209 | R209S | agA | agC | 1 | 1 | AY.42 | 0.00004 |
N | 209 | R209R | Aga | Cga | 1 | 1 | AY.44 | 0.000006 |
N | 209 | R209del | AGA | --- | 1 | 1 | AY.45 | 0.000122 |
N | 209 | R209G | Aga | Gga | 1 | 1 | AY.46 | 0.000104 |
N | 209 | R209S | agA | agC | 1 | 1 | AY.46 | 0.000104 |
N | 209 | R209del | AGA | --- | 1 | 1 | AY.46 | 0.000104 |
N | 209 | R209G | Aga | Gga | 1 | 1 | AY.46.2 | 0.000635 |
N | 209 | R209del | AGA | --- | 1 | 1 | AY.46.6 | 0.000072 |
N | 209 | R209del | AGA | --- | 1 | 1 | AY.47 | 0.000031 |
N | 209 | R209T | aGa | aCa | 1 | 1 | AY.47 | 0.000031 |
N | 209 | R209del2 | AGa | --a | 1 | 1 | AY.47 | 0.000031 |
N | 209 | R209del2 | AGA | --N | 1 | 1 | AY.5 | 0.000021 |
N | 209 | R209I | aGa | aTa | 1 | 1 | AY.5.4 | 0.000277 |
N | 209 | R209G | Aga | Gga | 1 | 1 | AY.52 | 0.000814 |
N | 209 | R209I | aGa | aTa | 1 | 1 | AY.53 | 0.000288 |
N | 209 | R209del | AGA | --- | 1 | 1 | AY.53 | 0.000288 |
N | 209 | R209I | aGa | aTa | 1 | 1 | AY.55 | 0.000917 |
N | 209 | R209I | aGa | aTa | 1 | 1 | AY.6 | 0.000041 |
N | 209 | R209S | agA | agC | 1 | 1 | AY.6 | 0.000041 |
N | 209 | R209G | Aga | Gga | 1 | 1 | AY.6 | 0.000041 |
N | 209 | R209I | aGa | aTa | 1 | 1 | AY.60 | 0.000938 |
N | 209 | R209G | Aga | Gga | 1 | 1 | AY.61 | 0.000105 |
N | 209 | R209del2 | aGA | a-- | 1 | 1 | AY.61 | 0.000105 |
N | 209 | R209T | aGa | aCa | 1 | 1 | AY.61 | 0.000105 |
N | 209 | R209K | aGa | aAa | 1 | 1 | AY.61 | 0.000105 |
N | 209 | R209I | aGa | aTa | 1 | 1 | AY.68 | 0.000274 |
N | 209 | R209del2 | aGA | a-- | 1 | 1 | AY.70 | 0.000209 |
N | 209 | R209G | Aga | Gga | 1 | 1 | AY.73 | 0.000665 |
N | 209 | R209del | AGA | --- | 1 | 1 | AY.75 | 0.000056 |
N | 209 | R209del1 | aGa | a-a | 1 | 1 | AY.75 | 0.000056 |
N | 209 | R209K | aGa | aAa | 1 | 1 | AY.75.1 | 0.00018 |
N | 209 | R209del | AGA | --- | 1 | 1 | AY.75.1 | 0.00018 |
N | 209 | R209I | aGa | aTa | 1 | 1 | AY.77 | 0.001127 |
N | 209 | R209G | Aga | Gga | 1 | 1 | AY.84 | 0.000437 |
N | 209 | R209T | aGa | aCa | 1 | 1 | AY.85 | 0.000427 |
N | 209 | R209S | agA | agC | 1 | 1 | AY.88 | 0.000884 |
N | 209 | R209del | AGA | --- | 1 | 1 | AY.9 | 0.000068 |
N | 209 | R209T | aGa | aCa | 1 | 1 | AY.9.1 | 0.000084 |
N | 209 | R209G | Aga | Gga | 1 | 1 | AY.9.1 | 0.000084 |
N | 209 | R209del | AGA | --- | 1 | 1 | AY.9.2 | 0.000037 |
N | 209 | R209S | agA | agT | 1 | 1 | AY.9.2 | 0.000037 |
N | 209 | R209I | aGa | aTa | 1 | 1 | AY.91 | 0.00073 |
N | 209 | R209I | aGa | aTa | 1 | 1 | AY.93 | 0.000273 |
N | 209 | R209T | aGa | aCa | 1 | 1 | AY.98 | 0.000079 |
N | 209 | R209K | aGa | aAa | 1 | 1 | AY.98 | 0.000079 |
N | 209 | R209I | aGa | aTa | 1 | 1 | AY.98 | 0.000079 |
N | 209 | R209del | AGA | --- | 1 | 1 | AY.98 | 0.000079 |
N | 209 | R209G | Aga | Gga | 1 | 1 | AY.98.1 | 0.000048 |
N | 209 | R209R | Aga | Cga | 1 | 1 | AY.98.1 | 0.000048 |
N | 209 | R209I | aGa | aTa | 1 | 1 | AY.99.2 | 0.000092 |
N | 209 | R209K | aGa | aAa | 1 | 1 | AY.99.2 | 0.000092 |
N | 209 | R209del | AGA | --- | 1 | 1 | AZ.2 | 0.000821 |
N | 209 | R209R | agA | agG | 1 | 1 | AZ.2 | 0.000821 |
N | 209 | R209S | agA | agC | 1 | 1 | B | 0.000128 |
N | 209 | R209G | Aga | Gga | 1 | 1 | B | 0.000128 |
N | 209 | R209T | aGa | aCa | 1 | 1 | B | 0.000128 |
N | 209 | R209S | agA | agT | 1 | 1 | B.1.1.1 | 0.000327 |
N | 209 | R209del | AGA | --- | 1 | 1 | B.1.1.1 | 0.000327 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.1.10 | 0.001115 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.1.129 | 0.009174 |
N | 209 | R209S | agA | agC | 1 | 1 | B.1.1.189 | 0.001513 |
N | 209 | R209T | aGa | aCa | 1 | 1 | B.1.1.189 | 0.001513 |
N | 209 | R209S | agA | agT | 1 | 1 | B.1.1.214 | 0.000055 |
N | 209 | R209del | AGA | --- | 1 | 1 | B.1.1.214 | 0.000055 |
N | 209 | R209S | agA | agC | 1 | 1 | B.1.1.222 | 0.000204 |
N | 209 | R209G | Aga | Gga | 1 | 1 | B.1.1.237 | 0.005405 |
N | 209 | R209G | Aga | Gga | 1 | 1 | B.1.1.255 | 0.00303 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.1.263 | 0.001558 |
N | 209 | R209S | agA | agC | 1 | 1 | B.1.1.270 | 0.010309 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.1.28 | 0.000311 |
N | 209 | R209S | agA | agC | 1 | 1 | B.1.1.28 | 0.000311 |
N | 209 | R209del | AGA | --- | 1 | 1 | B.1.1.301 | 0.001179 |
N | 209 | R209del | AGA | --- | 1 | 1 | B.1.1.303 | 0.002762 |
N | 209 | R209G | Aga | Gga | 1 | 1 | B.1.1.312 | 0.001912 |
N | 209 | R209del | AGA | --- | 1 | 1 | B.1.1.312 | 0.001912 |
N | 209 | R209N | aGA | aAT | 1 | 1 | B.1.1.318 | 0.000302 |
N | 209 | R209X | Aga | Tga | 1 | 1 | B.1.1.318 | 0.000302 |
N | 209 | R209G | Aga | Gga | 1 | 1 | B.1.1.326 | 0.001761 |
N | 209 | R209del | AGA | --- | 1 | 1 | B.1.1.33 | 0.000421 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.1.334 | 0.016393 |
N | 209 | R209del | AGA | --- | 1 | 1 | B.1.1.369 | 0.000446 |
N | 209 | R209X | Aga | Tga | 1 | 1 | B.1.1.37 | 0.000193 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.1.372 | 0.000689 |
N | 209 | R209R | agA | agG | 1 | 1 | B.1.1.374 | 0.002375 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.1.39 | 0.00051 |
N | 209 | R209G | Aga | Gga | 1 | 1 | B.1.1.409 | 0.002833 |
N | 209 | R209del | AGA | --- | 1 | 1 | B.1.1.413 | 0.006897 |
N | 209 | R209G | Aga | Gga | 1 | 1 | B.1.1.413 | 0.006897 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.1.421 | 0.030303 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.1.448 | 0.002033 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.1.464 | 0.001473 |
N | 209 | R209S | agA | agT | 1 | 1 | B.1.1.485 | 0.016667 |
N | 209 | R209T | aGa | aCa | 1 | 1 | B.1.1.50 | 0.000679 |
N | 209 | R209del | AGA | --- | 1 | 1 | B.1.1.50 | 0.000679 |
N | 209 | R209G | Aga | Gga | 1 | 1 | B.1.1.517 | 0.006803 |
N | 209 | R209S | agA | agT | 1 | 1 | B.1.1.519 | 0.00004 |
N | 209 | R209G | Aga | Gga | 1 | 1 | B.1.1.525 | 0.005464 |
N | 209 | R209R | agA | agG | 1 | 1 | B.1.1.528 | 0.004808 |
N | 209 | R209del2 | aGA | a-- | 1 | 1 | B.1.1.7 | 0.000001 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.103 | 0.019231 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.108 | 0.005814 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.111 | 0.001175 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.12 | 0.008 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.147 | 0.000756 |
N | 209 | R209T | aGa | aCa | 1 | 1 | B.1.160 | 0.000031 |
N | 209 | R209del | AGA | --- | 1 | 1 | B.1.160 | 0.000031 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.164 | 0.014925 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.169 | 0.014925 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.177.10 | 0.000878 |
N | 209 | R209T | aGa | aCa | 1 | 1 | B.1.177.24 | 0.001295 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.177.43 | 0.001477 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.177.51 | 0.004566 |
N | 209 | R209R | Aga | Cga | 1 | 1 | B.1.177.56 | 0.000668 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.177.57 | 0.000281 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.177.6 | 0.000977 |
N | 209 | R209E | AGA | GAG | 1 | 1 | B.1.177.63 | 0.002703 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.177.65 | 0.000665 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.177.7 | 0.000165 |
N | 209 | R209G | Aga | Gga | 1 | 1 | B.1.177.7 | 0.000165 |
N | 209 | R209T | aGa | aCa | 1 | 1 | B.1.177.72 | 0.00339 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.177.73 | 0.000566 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.177.73 | 0.000566 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.177.81 | 0.000189 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.177.86 | 0.000183 |
N | 209 | R209S | agA | agC | 1 | 1 | B.1.206 | 0.000816 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.210 | 0.002132 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.214.2 | 0.0006 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.214.3 | 0.007143 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.22 | 0.001318 |
N | 209 | R209G | Aga | Gga | 1 | 1 | B.1.221 | 0.000071 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.221.2 | 0.004016 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.223 | 0.002778 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.23 | 0.006061 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.233 | 0.014085 |
N | 209 | R209R | agA | agG | 1 | 1 | B.1.236 | 0.002053 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.237 | 0.004975 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.240 | 0.000216 |
N | 209 | R209del | AGA | --- | 1 | 1 | B.1.258 | 0.000067 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.258 | 0.000067 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.258.11 | 0.000396 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.258.15 | 0.018868 |
N | 209 | R209T | aGa | aCa | 1 | 1 | B.1.258.17 | 0.000104 |
N | 209 | R209R | Aga | Cga | 1 | 1 | B.1.258.6 | 0.019608 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.258.7 | 0.001912 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.281 | 0.021739 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.289 | 0.00266 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.291 | 0.019231 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.293 | 0.0125 |
N | 209 | R209T | aGa | aCa | 1 | 1 | B.1.3 | 0.002618 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.302 | 0.013333 |
N | 209 | R209T | aGa | aCa | 1 | 1 | B.1.305 | 0.002151 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.308 | 0.034483 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.311 | 0.000275 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.320 | 0.001245 |
N | 209 | R209T | aGa | aCa | 1 | 1 | B.1.320 | 0.001245 |
N | 209 | R209S | agA | agC | 1 | 1 | B.1.329 | 0.000608 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.338 | 0.008621 |
N | 209 | R209T | aGa | aCa | 1 | 1 | B.1.351 | 0.00003 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.356 | 0.001727 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.36 | 0.000146 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.36 | 0.000146 |
N | 209 | R209G | Aga | Gga | 1 | 1 | B.1.36 | 0.000146 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.36.17 | 0.000494 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.36.22 | 0.001208 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.36.36 | 0.000602 |
N | 209 | R209del | AGA | --- | 1 | 1 | B.1.36.36 | 0.000602 |
N | 209 | R209T | aGa | aCa | 1 | 1 | B.1.36.38 | 0.001642 |
N | 209 | R209S | agA | agC | 1 | 1 | B.1.36.38 | 0.001642 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.361 | 0.001289 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.367 | 0.000792 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.369 | 0.000285 |
N | 209 | R209del | AGA | --- | 1 | 1 | B.1.369 | 0.000285 |
N | 209 | R209T | aGa | aCa | 1 | 1 | B.1.371 | 0.001122 |
N | 209 | R209X | Aga | Tga | 1 | 1 | B.1.389 | 0.001002 |
N | 209 | R209R | Aga | Cga | 1 | 1 | B.1.389 | 0.001002 |
N | 209 | R209T | aGa | aCa | 1 | 1 | B.1.396 | 0.000706 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.400 | 0.000429 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.411 | 0.003704 |
N | 209 | R209T | aGa | aCa | 1 | 1 | B.1.427 | 0.00005 |
N | 209 | R209S | agA | agT | 1 | 1 | B.1.427 | 0.00005 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.428 | 0.00102 |
N | 209 | R209R | Aga | Cga | 1 | 1 | B.1.429 | 0.000024 |
N | 209 | R209del | AGA | --- | 1 | 1 | B.1.429 | 0.000024 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.429 | 0.000024 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.443 | 0.004673 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.451 | 0.008197 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.453 | 0.003236 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.462 | 0.007246 |
N | 209 | R209del | AGA | --- | 1 | 1 | B.1.465 | 0.003802 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.470 | 0.001404 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.491 | 0.052632 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.497 | 0.000315 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.503 | 0.002488 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.509 | 0.000866 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.510 | 0.026316 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.521 | 0.004975 |
N | 209 | R209G | Aga | Gga | 1 | 1 | B.1.525 | 0.000113 |
N | 209 | R209del | AGA | --- | 1 | 1 | B.1.525 | 0.000113 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.527 | 0.003704 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.540 | 0.009709 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.540 | 0.009709 |
N | 209 | R209T | aGa | aCa | 1 | 1 | B.1.545 | 0.014493 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.549 | 0.007194 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.554 | 0.004405 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.561 | 0.000397 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.564 | 0.000426 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.565 | 0.00081 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.566 | 0.019231 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.566 | 0.019231 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.568 | 0.001111 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.576 | 0.000907 |
N | 209 | R209G | Aga | Gga | 1 | 1 | B.1.576 | 0.000907 |
N | 209 | R209del | AGA | --- | 1 | 1 | B.1.576 | 0.000907 |
N | 209 | R209del | AGA | --- | 1 | 1 | B.1.580 | 0.004065 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.581 | 0.009434 |
N | 209 | R209T | aGa | aCa | 1 | 1 | B.1.582 | 0.000491 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.588 | 0.00091 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.590 | 0.004545 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.595 | 0.000261 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.595.4 | 0.007299 |
N | 209 | R209del2 | aGA | a-- | 1 | 1 | B.1.596 | 0.000087 |
N | 209 | R209del | AGA | --- | 1 | 1 | B.1.596 | 0.000087 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.601 | 0.030303 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.602 | 0.006536 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.1.609 | 0.000479 |
N | 209 | R209T | aGa | aCa | 1 | 1 | B.1.609 | 0.000479 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.611 | 0.04 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.612 | 0.002653 |
N | 209 | R209del | AGA | --- | 1 | 1 | B.1.617.1 | 0.000129 |
N | 209 | R209X | Aga | Tga | 1 | 1 | B.1.617.2 | 0.000004 |
N | 209 | R209R | agA | agG | 1 | 1 | B.1.625 | 0.002353 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.628 | 0.000352 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.1.78 | 0.008547 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.10 | 0.008264 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.3 | 0.000831 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.3 | 0.000831 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.31 | 0.003731 |
N | 209 | R209K | aGa | aAa | 1 | 1 | B.4 | 0.002208 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.4 | 0.002208 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.6 | 0.00091 |
N | 209 | R209I | aGa | aTa | 1 | 1 | B.6.6 | 0.000889 |
N | 209 | R209S | agA | agC | 1 | 1 | C.1 | 0.002392 |
N | 209 | R209S | agA | agC | 1 | 1 | C.26 | 0.007353 |
N | 209 | R209P | AGa | CCa | 1 | 1 | C.35 | 0.000774 |
N | 209 | R209del | AGA | --- | 1 | 1 | C.36.3 | 0.000567 |
N | 209 | R209I | aGa | aTa | 1 | 1 | C.37 | 0.000116 |
N | 209 | R209G | Aga | Gga | 1 | 1 | C.37 | 0.000116 |
N | 209 | R209del | AGA | --- | 1 | 1 | C.37.1 | 0.002618 |
N | 209 | R209G | Aga | Gga | 1 | 1 | C.38 | 0.008065 |
N | 209 | R209I | aGa | aTa | 1 | 1 | D.2 | 0.000075 |
N | 209 | R209T | aGa | aCa | 1 | 1 | D.2 | 0.000075 |
N | 209 | R209del | AGA | --- | 1 | 1 | N.3 | 0.005814 |
N | 209 | R209del | AGA | --- | 1 | 1 | N.5 | 0.001767 |
N | 209 | R209del | AGA | --- | 1 | 1 | P.1 | 0.000016 |
N | 209 | R209R | agA | agG | 1 | 1 | P.1.1 | 0.000318 |
N | 209 | R209del | AGA | --- | 1 | 1 | P.1.1 | 0.000318 |
N | 209 | R209I | aGa | aTa | 1 | 1 | P.1.12 | 0.000484 |
N | 209 | R209R | agA | agG | 1 | 1 | P.1.14 | 0.000048 |
N | 209 | R209G | Aga | Gga | 1 | 1 | P.1.14 | 0.000048 |
N | 209 | R209I | aGa | aTa | 1 | 1 | P.1.14 | 0.000048 |
N | 209 | R209I | aGa | aTa | 1 | 1 | P.1.15 | 0.000232 |
N | 209 | R209G | Aga | Gga | 1 | 1 | P.1.15 | 0.000232 |
N | 209 | R209S | agA | agC | 1 | 1 | P.1.15 | 0.000232 |
N | 209 | R209R | agA | agG | 1 | 1 | P.1.16 | 0.000374 |
N | 209 | R209K | aGa | aAa | 1 | 1 | P.1.16 | 0.000374 |
N | 209 | R209I | aGa | aTa | 1 | 1 | P.1.17 | 0.000162 |
N | 209 | R209T | aGa | aCa | 1 | 1 | P.1.2 | 0.001156 |
N | 209 | R209R | agA | agG | 1 | 1 | P.1.6 | 0.001946 |
N | 209 | R209I | aGa | aTa | 1 | 1 | P.1.7 | 0.000319 |
N | 209 | R209del | AGA | --- | 1 | 1 | P.1.7 | 0.000319 |
N | 209 | R209I | aGa | aTa | 1 | 1 | P.1.8 | 0.004785 |
N | 209 | R209S | agA | agC | 1 | 1 | P.2 | 0.000187 |
N | 209 | R209X | Aga | Tga | 1 | 1 | P.2 | 0.000187 |
N | 209 | R209G | Aga | Gga | 1 | 1 | P.2 | 0.000187 |
N | 209 | R209del | AGA | --- | 1 | 1 | P.2 | 0.000187 |
N | 209 | R209T | aGa | aCa | 1 | 1 | P.3 | 0.001595 |
N | 209 | R209del | AGA | --- | 1 | 1 | Q.3 | 0.000145 |
N | 209 | R209G | Aga | Gga | 1 | 1 | Q.8 | 0.000165 |
N | 209 | R209K | aGa | aAa | 1 | 1 | W.1 | 0.008696 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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