CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : CodonNum = 207

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N207P207SnonsynCctTct913691330.99967228892-28894
N207P207SnonsynCcTTcC913610.00010945728892-28894
N207P207SnonsynCcTTcA913610.00010945728892-28894
N207P207SnonsynCCTAGC913610.00010945728892-28894
N207P207LnonsyncCtcTt53505350128892-28894
N207P207deldelCCT---14871487128892-28894
N207P207TnonsynCctAct492492128892-28894
N207P207PsynccTccC2701440.53333328892-28894
N207P207PsynccTccA2701110.41111128892-28894
N207P207PsynccTccG270150.055555628892-28894
N207P207HnonsyncCtcAt118118128892-28894
N207P207RnonsyncCtcGt6363128892-28894
N207P207QnonsyncCTcAA2626128892-28894
N207P207del1delCct-ct1590.628892-28894
N207P207del1delccTcc-1530.228892-28894
N207P207del1delCcT-cN1530.228892-28894
N207P207AnonsynCctGct1212128892-28894
N207P207del2delcCTc--850.62528892-28894
N207P207del2delCCT--N830.37528892-28894
N207P207FnonsynCCtTTt66128892-28894
N207P207NnonsynCCtAAt33128892-28894
N207P207InonsynCCtATt11128892-28894
N207P207VnonsynCCtGTt11128892-28894
N207P207GnonsynCCtGGt11128892-28894
N207P207WnonsynCCTTGG11128892-28894

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N207P207SCctTct91339136All0.001747
N207P207SCcTTcC19136All0
N207P207SCCTAGC19136All0
N207P207SCcTTcA19136All0
N207P207LcCtcTt53505350All0.001023
N207P207SCctTct39373937AY.1110.721062
N207P207LcCtcTt35083508B.1.3110.963207
N207P207delCCT---14871487All0.000284
N207P207SCctTct13531353B.1.3490.967119
N207P207SCctTct12701270B.1.5770.872852
N207P207LcCtcTt874874AY.730.581504
N207P207SCctTct823823AY.660.880214
N207P207SCctTct561561B.1.5950.146399
N207P207TCctAct492492All0.000094
N207P207SCctTct488488AY.40.00076
N207P207TCctAct330330B.10.003023
N207P207delCCT---283283P.10.004458
N207P207PccTccC144270All0.000028
N207P207PccTccA111270All0.000021
N207P207PccTccG15270All0.000003
N207P207LcCtcTt265265B.1.5990.967153
N207P207SCctTct200202B.10.001832
N207P207SCcTTcA1202B.10.000009
N207P207SCcTTcC1202B.10.000009
N207P207delCCT---171171B.1.1.70.000153
N207P207LcCtcTt130130AY.260.00368
N207P207LcCtcTt122122B.10.001117
N207P207LcCtcTt121121B.1.1.70.000108
N207P207HcCtcAt118118All0.000023
N207P207delCCT---8585D.20.006379
N207P207TCctAct6666AY.250.000397
N207P207RcCtcGt6363All0.000012
N207P207delCCT---6363B.1.617.20.000237
N207P207PccTccA5858B.1.1.2840.006229
N207P207SCctTct5455B.1.617.20.000203
N207P207SCCTAGC155B.1.617.20.000004
N207P207RcCtcGt5353B.10.000485
N207P207delCCT---4949AY.40.000076
N207P207delCCT---4848AY.1030.000298
N207P207delCCT---4747AY.740.005435
N207P207delCCT---4747B.10.00043
N207P207SCctTct4242B.1.1.70.000038
N207P207SCctTct4242B.1.20.00037
N207P207delCCT---3636P.1.120.017425
N207P207delCCT---3535P.1.170.005662
N207P207delCCT---3434B.1.10.000617
N207P207delCCT---3434B.1.1.930.871795
N207P207delCCT---3333AY.250.000198
N207P207SCctTct3232P.20.005972
N207P207PccTccA2129B.1.1.70.000019
N207P207PccTccC829B.1.1.70.000007
N207P207delCCT---2828B.1.1.3700.35443
N207P207SCctTct2727AY.440.000164
N207P207QcCTcAA2626All0.000005
N207P207delCCT---2626AY.1000.001196
N207P207delCCT---2525P.1.140.001195
N207P207delCCT---2424P.1.150.005576
N207P207TCctAct2323AY.30.000229
N207P207SCctTct2323AY.430.000102
N207P207SCctTct2323B.1.10.000417
N207P207delCCT---2323Q.20.01411
N207P207delCCT---2222AY.520.017915
N207P207LcCtcTt2222B.1.617.20.000083
N207P207HcCtcAt2121B.1.264.11
N207P207SCctTct2121P.10.000331
N207P207delCCT---2020AY.4.2.10.00298
N207P207LcCtcTt2020B.1.10.000363
N207P207LcCtcTt1919B.1.20.000167
N207P207delCCT---1818AY.440.00011
N207P207HcCtcAt1818B.1.1.70.000016
N207P207SCctTct1818B.1.5960.001568
N207P207SCctTct1717AY.250.000102
N207P207delCCT---1616AY.30.000159
N207P207delCCT---1616AY.430.000071
N207P207del1Cct-ct915All0.000002
N207P207del1CcT-cN315All0.000001
N207P207del1ccTcc-315All0.000001
N207P207LcCtcTt1515AY.130.002415
N207P207delCCT---1515AY.260.000425
N207P207SCctTct1515B.1.1.280.004669
N207P207TCctAct1515B.1.1.5260.053191
N207P207LcCtcTt1515B.1.5770.010309
N207P207delCCT---1515P.1.10.004765
N207P207PccTccC913B.10.000082
N207P207PccTccA413B.10.000037
N207P207QcCTcAA1313B.1.2130.19403
N207P207LcCtcTt1313P.10.000205
N207P207ACctGct1212All0.000002
N207P207PccTccC1012AY.440.000061
N207P207PccTccG112AY.440.000006
N207P207PccTccA112AY.440.000006
N207P207delCCT---1212AY.470.000373
N207P207LcCtcTt1212B.1.4890.521739
N207P207HcCtcAt1111AY.250.000066
N207P207TCctAct1111AY.40.000017
N207P207PccTccC1011B.1.10.000181
N207P207PccTccA111B.1.10.000018
N207P207LcCtcTt1111B.1.1490.037671
N207P207LcCtcTt1111B.1.2100.023454
N207P207delCCT---1010AY.230.000697
N207P207PccTccG510AY.40.000008
N207P207PccTccC410AY.40.000006
N207P207PccTccA110AY.40.000002
N207P207SCctTct1010AY.4.50.001075
N207P207delCCT---1010B.1.1.5190.000397
N207P207delCCT---1010B.1.2140.03663
N207P207delCCT---99AY.1180.000564
N207P207LcCtcTt99AY.200.00035
N207P207delCCT---99AY.450.001095
N207P207HcCtcAt99B.1.617.20.000034
N207P207del2cCTc--58All0.000001
N207P207del2CCT--N38All0.000001
N207P207SCctTct88AY.1200.000297
N207P207delCCT---88AY.210.01518
N207P207LcCtcTt88AY.40.000012
N207P207LcCtcTt88B.1.177.730.00453
N207P207delCCT---88B.1.2430.000557
N207P207delCCT---88B.1.5260.000188
N207P207LcCtcTt88B.1.5960.000697
N207P207HcCtcAt88B.1.6090.003835
N207P207SCctTct77AY.230.000488
N207P207PccTccC67AY.30.00006
N207P207PccTccA17AY.30.00001
N207P207SCctTct77AY.470.000218
N207P207HcCtcAt77B.10.000064
N207P207PccTccC77B.1.177.600.001529
N207P207LcCtcTt77B.1.2790.003595
N207P207FCCtTTt66All0.000001
N207P207SCctTct66AY.1020.000159
N207P207SCctTct66AY.1030.000037
N207P207delCCT---66AY.1190.000212
N207P207SCctTct66AY.30.00006
N207P207TCctAct66AY.430.000027
N207P207PccTccC66AY.50.000124
N207P207delCCT---66AY.750.000336
N207P207delCCT---66AY.850.002563
N207P207PccTccC36B.1.20.000026
N207P207PccTccA26B.1.20.000018
N207P207PccTccG16B.1.20.000009
N207P207SCctTct66B.1.2840.078947
N207P207delCCT---66B.1.3490.004289
N207P207HcCtcAt66C.160.006363
N207P207SCctTct66C.360.005464
N207P207HcCtcAt55AY.1030.000031
N207P207SCctTct55AY.200.000194
N207P207PccTccC55AY.250.00003
N207P207delCCT---55AY.270.000324
N207P207LcCtcTt55AY.30.00005
N207P207HcCtcAt55AY.330.000334
N207P207PccTccC55AY.39.10.000198
N207P207SCctTct55B.1.1.2140.000277
N207P207LcCtcTt55B.1.1.3060.002192
N207P207SCctTct55B.1.1.3690.002231
N207P207ACctGct55B.1.258.140.004902
N207P207PccTccA55B.1.3560.008636
N207P207delCCT---55B.1.617.10.000645
N207P207delCCT---44AD.20.000876
N207P207SCctTct44AY.1000.000184
N207P207delCCT---44AY.290.000063
N207P207TCctAct44AY.3.10.000341
N207P207LcCtcTt44AY.330.000267
N207P207SCctTct44AY.390.000099
N207P207delCCT---44AY.390.000099
N207P207SCctTct44AY.4.20.000087
N207P207delCCT---44AY.4.20.000087
N207P207PccTccC44AY.430.000018
N207P207LcCtcTt44AY.430.000018
N207P207SCctTct44AY.50.000083
N207P207delCCT---44AY.590.002119
N207P207PccTccA44AY.630.001547
N207P207delCCT---44AY.9.10.000335
N207P207SCctTct44AY.980.000316
N207P207LcCtcTt44B0.000511
N207P207delCCT---44B0.000511
N207P207LcCtcTt44B.1.1.1860.013746
N207P207delCCT---44B.1.1.2220.000816
N207P207delCCT---44B.1.1.2320.00726
N207P207SCctTct44B.1.1.2430.016327
N207P207SCctTct44B.1.1.2770.003035
N207P207PccTccC44B.1.1770.000053
N207P207QcCTcAA44B.1.30.010471
N207P207LcCtcTt44B.1.6090.001918
N207P207PccTccC34B.1.617.20.000011
N207P207PccTccG14B.1.617.20.000004
N207P207PccTccG44B.1.6230.002146
N207P207del1Cct-ct24P.10.000032
N207P207del1CcT-cN24P.10.000032
N207P207del1Cct-ct44P.1.140.000191
N207P207delCCT---44P.1.20.004624
N207P207LcCtcTt33AE.80.001467
N207P207NCCtAAt33All0.000001
N207P207delCCT---33AY.1020.00008
N207P207LcCtcTt33AY.1030.000019
N207P207SCctTct33AY.1170.000254
N207P207delCCT---33AY.200.000117
N207P207PccTccC23AY.260.000057
N207P207PccTccA13AY.260.000028
N207P207delCCT---33AY.300.001187
N207P207delCCT---33AY.330.0002
N207P207PccTccC33AY.360.000445
N207P207delCCT---33AY.360.000445
N207P207TCctAct33AY.390.000074
N207P207del2cCTc--33AY.40.000005
N207P207delCCT---33AY.4.50.000322
N207P207PccTccC33AY.420.000121
N207P207LcCtcTt33AY.440.000018
N207P207PccTccC33AY.46.20.001906
N207P207delCCT---33AY.630.001161
N207P207LcCtcTt33AY.710.001425
N207P207delCCT---33AY.9.20.00011
N207P207SCctTct33AY.98.10.000145
N207P207delCCT---33B.1.1.1700.003741
N207P207LcCtcTt33B.1.1.2140.000166
N207P207SCctTct33B.1.1.2220.000612
N207P207LcCtcTt33B.1.1.2800.009259
N207P207LcCtcTt33B.1.1.3180.000905
N207P207SCctTct33B.1.1.3680.009259
N207P207delCCT---33B.1.1.4340.001046
N207P207LcCtcTt33B.1.1.500.002037
N207P207PccTccC33B.1.1.5190.000119
N207P207del1ccTcc-23B.1.1.70.000002
N207P207del1CcT-cN13B.1.1.70.000001
N207P207TCctAct33B.1.1770.00004
N207P207HcCtcAt33B.1.20.000026
N207P207FCCtTTt33B.1.3490.002144
N207P207delCCT---33B.1.360.000438
N207P207LcCtcTt33B.1.4280.003061
N207P207SCctTct33B.1.4290.000071
N207P207delCCT---33B.1.5760.00272
N207P207LcCtcTt33B.1.5760.00272
N207P207SCctTct33B.1.5810.028302
N207P207LcCtcTt33C.160.003181
N207P207LcCtcTt33D.20.000225
N207P207PccTccC33P.1.70.000958
N207P207PccTccC33P.60.009434
N207P207PccTccC220.111111
N207P207PccTccC22AY.1000.000092
N207P207PccTccC12AY.1020.000027
N207P207PccTccA12AY.1020.000027
N207P207delCCT---22AY.1100.000225
N207P207LcCtcTt22AY.1140.000462
N207P207delCCT---22AY.1200.000074
N207P207del2cCTc--22AY.1200.000074
N207P207SCctTct22AY.260.000057
N207P207PccTccC22AY.290.000032
N207P207ACctGct22AY.30.00002
N207P207TCctAct22AY.330.000134
N207P207LcCtcTt22AY.4.20.000043
N207P207PccTccG12AY.4.20.000022
N207P207PccTccC12AY.4.20.000022
N207P207del2CCT--N22AY.4.2.10.000298
N207P207delCCT---22AY.400.001929
N207P207delCCT---22AY.420.00008
N207P207LcCtcTt22AY.420.00008
N207P207HcCtcAt22AY.440.000012
N207P207TCctAct22AY.440.000012
N207P207delCCT---22AY.460.000208
N207P207delCCT---22AY.50.000041
N207P207delCCT---22AY.500.001599
N207P207delCCT---22AY.540.000191
N207P207HcCtcAt22AY.60.000082
N207P207SCctTct22AY.7.10.000225
N207P207delCCT---22AY.7.20.001119
N207P207LcCtcTt22AY.740.000231
N207P207LcCtcTt22AY.750.000112
N207P207delCCT---22AY.98.10.000097
N207P207delCCT---22AY.99.20.000184
N207P207SCctTct22AY.99.20.000184
N207P207QcCTcAA22B.1.10.000036
N207P207LcCtcTt22B.1.1.10.000653
N207P207SCctTct22B.1.1.3180.000604
N207P207delCCT---22B.1.1.330.000842
N207P207LcCtcTt22B.1.1.330.000842
N207P207LcCtcTt22B.1.1.4020.022222
N207P207LcCtcTt22B.1.1.4220.090909
N207P207SCctTct22B.1.1.700.000682
N207P207TCctAct22B.1.1600.000062
N207P207LcCtcTt22B.1.1770.000026
N207P207TCctAct22B.1.20.000018
N207P207delCCT---22B.1.20.000018
N207P207QcCTcAA22B.1.20.000018
N207P207PccTccC22B.1.2210.000142
N207P207RcCtcGt22B.1.2430.000139
N207P207LcCtcTt22B.1.2580.000133
N207P207HcCtcAt22B.1.258.240.021505
N207P207LcCtcTt22B.1.3240.00321
N207P207LcCtcTt22B.1.3440.016393
N207P207delCCT---22B.1.3510.000059
N207P207TCctAct22B.1.351.30.001753
N207P207HcCtcAt22B.1.360.000292
N207P207RcCtcGt22B.1.3670.001585
N207P207LcCtcTt22B.1.390.007812
N207P207SCctTct22B.1.3960.001411
N207P207HcCtcAt22B.1.438.10.000215
N207P207PccTccA22B.1.4780.023529
N207P207PccTccC22B.1.5260.000047
N207P207LcCtcTt22B.1.5490.014388
N207P207LcCtcTt22B.1.5800.00813
N207P207FCCtTTt22B.1.5960.000174
N207P207LcCtcTt22B.1.6370.000146
N207P207delCCT---22C.370.000232
N207P207PccTccC22D.20.00015
N207P207delCCT---22P.1.100.000539
N207P207SCctTct22P.1.160.000748
N207P207LcCtcTt22P.1.170.000324
N207P207SCctTct22P.1.170.000324
N207P207delCCT---22P.1.70.000639
N207P207delCCT---22P.20.000373
N207P207ACctGct110.055556
N207P207RcCtcGt110.055556
N207P207LcCtcTt11A0.000387
N207P207LcCtcTt11A.10.000282
N207P207delCCT---11A.10.000282
N207P207PccTccA11A.2.50.000499
N207P207delCCT---11A.23.10.000704
N207P207RcCtcGt11AD.20.000219
N207P207WCCTTGG11All0
N207P207ICCtATt11All0
N207P207GCCtGGt11All0
N207P207VCCtGTt11All0
N207P207HcCtcAt11AY.1020.000027
N207P207TCctAct11AY.1020.000027
N207P207TCctAct11AY.1030.000006
N207P207PccTccC11AY.1030.000006
N207P207SCctTct11AY.1050.000643
N207P207PccTccC11AY.1090.00074
N207P207SCctTct11AY.110.001339
N207P207delCCT---11AY.1130.000142
N207P207TCctAct11AY.1170.000085
N207P207SCctTct11AY.1180.000063
N207P207PccTccA11AY.1190.000035
N207P207SCctTct11AY.120.000316
N207P207HcCtcAt11AY.1200.000037
N207P207PccTccC11AY.1200.000037
N207P207TCctAct11AY.1200.000037
N207P207delCCT---11AY.1210.000135
N207P207TCctAct11AY.130.000161
N207P207SCctTct11AY.140.000088
N207P207TCctAct11AY.160.00038
N207P207delCCT---11AY.160.00038
N207P207delCCT---11AY.16.10.00047
N207P207PccTccA11AY.200.000039
N207P207PccTccC11AY.230.00007
N207P207delCCT---11AY.240.000431
N207P207LcCtcTt11AY.250.000006
N207P207HcCtcAt11AY.270.000065
N207P207LcCtcTt11AY.280.00189
N207P207LcCtcTt11AY.290.000016
N207P207delCCT---11AY.29.10.000221
N207P207del1Cct-ct11AY.30.00001
N207P207LcCtcTt11AY.3.10.000085
N207P207SCctTct11AY.320.000532
N207P207delCCT---11AY.320.000532
N207P207SCctTct11AY.330.000067
N207P207delCCT---11AY.340.000097
N207P207HcCtcAt11AY.360.000148
N207P207delCCT---11AY.370.000316
N207P207delCCT---11AY.380.000499
N207P207SCctTct11AY.39.10.00004
N207P207HcCtcAt11AY.39.10.00004
N207P207delCCT---11AY.39.10.00004
N207P207ACctGct11AY.40.000002
N207P207SCctTct11AY.4.2.10.000149
N207P207SCctTct11AY.4.30.000842
N207P207LcCtcTt11AY.4.50.000107
N207P207LcCtcTt11AY.400.000964
N207P207SCctTct11AY.420.00004
N207P207SCctTct11AY.450.000122
N207P207TCctAct11AY.460.000104
N207P207TCctAct11AY.46.20.000635
N207P207PccTccC11AY.46.40.000165
N207P207TCctAct11AY.46.60.000072
N207P207del1ccTcc-11AY.470.000031
N207P207LcCtcTt11AY.50.000021
N207P207delCCT---11AY.5.40.000277
N207P207PccTccC11AY.510.000909
N207P207PccTccC11AY.540.000095
N207P207PccTccG11AY.550.000917
N207P207SCctTct11AY.570.000656
N207P207delCCT---11AY.570.000656
N207P207SCctTct11AY.580.000907
N207P207PccTccC11AY.590.00053
N207P207NCCtAAt11AY.590.00053
N207P207PccTccC11AY.60.000041
N207P207SCctTct11AY.60.000041
N207P207delCCT---11AY.60.000041
N207P207SCctTct11AY.610.000105
N207P207delCCT---11AY.610.000105
N207P207TCctAct11AY.650.000533
N207P207LcCtcTt11AY.680.000274
N207P207PccTccA11AY.690.000187
N207P207TCctAct11AY.7.10.000113
N207P207SCctTct11AY.700.000209
N207P207SCctTct11AY.740.000116
N207P207LcCtcTt11AY.75.10.00018
N207P207SCctTct11AY.75.10.00018
N207P207delCCT---11AY.790.001211
N207P207HcCtcAt11AY.890.004902
N207P207PccTccA11AY.90.000068
N207P207SCctTct11AY.90.000068
N207P207RcCtcGt11AY.9.10.000084
N207P207ICCtATt11AY.9.20.000037
N207P207SCctTct11AY.9.20.000037
N207P207del2CCT--N11AY.980.000079
N207P207delCCT---11AY.980.000079
N207P207PccTccC11AY.98.10.000048
N207P207HcCtcAt11AZ.20.000821
N207P207HcCtcAt11B0.000128
N207P207PccTccC11B0.000128
N207P207FCCtTTt11B.10.000009
N207P207QcCTcAA11B.10.000009
N207P207LcCtcTt11B.1.1.1760.000439
N207P207SCctTct11B.1.1.1810.004545
N207P207PccTccC11B.1.1.1890.001513
N207P207SCctTct11B.1.1.1980.001468
N207P207LcCtcTt11B.1.1.2070.001182
N207P207delCCT---11B.1.1.2140.000055
N207P207LcCtcTt11B.1.1.2220.000204
N207P207PccTccA11B.1.1.2220.000204
N207P207SCctTct11B.1.1.2370.005405
N207P207delCCT---11B.1.1.250.000569
N207P207SCctTct11B.1.1.250.000569
N207P207LcCtcTt11B.1.1.2510.007937
N207P207LcCtcTt11B.1.1.2630.001558
N207P207delCCT---11B.1.1.270.00565
N207P207LcCtcTt11B.1.1.2770.000759
N207P207HcCtcAt11B.1.1.280.000311
N207P207LcCtcTt11B.1.1.2980.000862
N207P207delCCT---11B.1.1.3010.001179
N207P207delCCT---11B.1.1.3030.002762
N207P207delCCT---11B.1.1.3070.002532
N207P207LcCtcTt11B.1.1.3110.000358
N207P207delCCT---11B.1.1.3690.000446
N207P207LcCtcTt11B.1.1.3850.004464
N207P207LcCtcTt11B.1.1.390.00051
N207P207delCCT---11B.1.1.4130.006897
N207P207HcCtcAt11B.1.1.4160.000905
N207P207TCctAct11B.1.1.4320.001266
N207P207SCctTct11B.1.1.4340.000349
N207P207delCCT---11B.1.1.500.000679
N207P207SCctTct11B.1.1.500.000679
N207P207LcCtcTt11B.1.1.5190.00004
N207P207TCctAct11B.1.1.70.000001
N207P207ACctGct11B.1.1.70.000001
N207P207TCctAct11B.1.1030.019231
N207P207LcCtcTt11B.1.1190.010526
N207P207LcCtcTt11B.1.1260.001276
N207P207LcCtcTt11B.1.1600.000031
N207P207PccTccC11B.1.1600.000031
N207P207delCCT---11B.1.1600.000031
N207P207delCCT---11B.1.1770.000013
N207P207PccTccC11B.1.177.160.000664
N207P207LcCtcTt11B.1.177.40.000211
N207P207TCctAct11B.1.177.440.000519
N207P207WCCTTGG11B.1.177.630.002703
N207P207PccTccC11B.1.177.660.041667
N207P207SCctTct11B.1.177.730.000566
N207P207SCctTct11B.1.2340.000132
N207P207LcCtcTt11B.1.2410.000812
N207P207LcCtcTt11B.1.2430.00007
N207P207TCctAct11B.1.2470.014925
N207P207PccTccA11B.1.2580.000067
N207P207SCctTct11B.1.2580.000067
N207P207PccTccC11B.1.258.170.000104
N207P207HcCtcAt11B.1.2640.012346
N207P207QcCTcAA11B.1.2790.000514
N207P207LcCtcTt11B.1.3020.013333
N207P207delCCT---11B.1.3240.001605
N207P207LcCtcTt11B.1.3250.006897
N207P207SCctTct11B.1.3300.028571
N207P207SCctTct11B.1.3360.002439
N207P207PccTccC11B.1.3430.020833
N207P207PccTccC11B.1.3510.00003
N207P207ACctGct11B.1.360.000146
N207P207PccTccC11B.1.36.100.004785
N207P207TCctAct11B.1.36.220.001208
N207P207TCctAct11B.1.3610.001289
N207P207HcCtcAt11B.1.3660.004878
N207P207LcCtcTt11B.1.3670.000792
N207P207SCctTct11B.1.3670.000792
N207P207LcCtcTt11B.1.3690.000285
N207P207LcCtcTt11B.1.4000.000429
N207P207SCctTct11B.1.4170.028571
N207P207RcCtcGt11B.1.4270.00005
N207P207HcCtcAt11B.1.4270.00005
N207P207LcCtcTt11B.1.4270.00005
N207P207delCCT---11B.1.4270.00005
N207P207LcCtcTt11B.1.4290.000024
N207P207HcCtcAt11B.1.4380.006536
N207P207SCctTct11B.1.438.10.000107
N207P207delCCT---11B.1.4650.003802
N207P207LcCtcTt11B.1.4920.007042
N207P207SCctTct11B.1.4970.000315
N207P207LcCtcTt11B.1.5010.007353
N207P207TCctAct11B.1.5170.000427
N207P207delCCT---11B.1.5250.000113
N207P207SCctTct11B.1.5260.000024
N207P207ACctGct11B.1.5640.000426
N207P207SCctTct11B.1.5670.003333
N207P207SCctTct11B.1.5690.014493
N207P207SCctTct11B.1.5750.000303
N207P207SCctTct11B.1.5760.000907
N207P207SCctTct11B.1.5800.004065
N207P207delCCT---11B.1.5800.004065
N207P207LcCtcTt11B.1.5950.000261
N207P207delCCT---11B.1.5960.000087
N207P207PccTccG11B.1.5960.000087
N207P207LcCtcTt11B.1.6050.005952
N207P207VCCtGTt11B.1.617.10.000129
N207P207PccTccA11B.1.617.10.000129
N207P207TCctAct11B.1.617.20.000004
N207P207GCCtGGt11B.1.617.20.000004
N207P207LcCtcTt11B.1.780.008547
N207P207LcCtcTt11B.1.940.027027
N207P207RcCtcGt11B.310.003731
N207P207QcCTcAA11B.400.000364
N207P207LcCtcTt11B.400.000364
N207P207PccTccC11B.550.00295
N207P207PccTccC11B.580.010204
N207P207PccTccC11C.10.002392
N207P207NCCtAAt11C.350.000774
N207P207delCCT---11C.37.10.002618
N207P207SCctTct11D.20.000075
N207P207TCctAct11M.20.083333
N207P207delCCT---11N.50.001767
N207P207QcCTcAA11P.10.000016
N207P207NCCtAAt11P.10.000016
N207P207PccTccC11P.10.000016
N207P207HcCtcAt11P.10.000016
N207P207LcCtcTt11P.1.100.000269
N207P207SCctTct11P.1.110.010204
N207P207PccTccA11P.1.120.000484
N207P207del1Cct-ct11P.1.120.000484
N207P207SCctTct11P.1.120.000484
N207P207LcCtcTt11P.1.120.000484
N207P207delCCT---11P.1.130.000898
N207P207SCctTct11P.1.140.000048
N207P207LcCtcTt11P.1.140.000048
N207P207SCctTct11P.1.150.000232
N207P207LcCtcTt11P.1.150.000232
N207P207LcCtcTt11P.1.160.000374
N207P207delCCT---11P.1.160.000374
N207P207QcCTcAA11P.1.170.000162
N207P207LcCtcTt11P.1.70.000319
N207P207del1Cct-ct11P.1.70.000319
N207P207delCCT---11P.1.80.004785
N207P207PccTccC11P.20.000187
N207P207RcCtcGt11P.60.003145
N207P207LcCtcTt11Q.10.000126
N207P207delCCT---11Q.10.000126
N207P207delCCT---11Q.30.000145
N207P207PccTccC11Q.30.000145
N207P207delCCT---11Q.80.000165
N207P207LcCtcTt11Q.80.000165
N207P207PccTccC11R.10.00009
N207P207SCctTct11R.10.00009

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.