CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : CodonNum = 203 & Codon = aTg

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N203R203MnonsynaGgaTg27347402734740128880-28882

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N203R203MaGgaTg27347402734740All0.523051
N203R203MaGgaTg640012640012AY.40.996129
N203R203MaGgaTg262946262946B.1.617.20.990101
N203R203MaGgaTg223055223055AY.430.988237
N203R203MaGgaTg165165165165AY.250.993438
N203R203MaGgaTg162808162808AY.440.990973
N203R203MaGgaTg159969159969AY.1030.993257
N203R203MaGgaTg9525895258AY.30.947473
N203R203MaGgaTg6335263352AY.290.99929
N203R203MaGgaTg4735647356AY.50.977864
N203R203MaGgaTg4602146021AY.4.20.998135
N203R203MaGgaTg4021240212AY.390.993699
N203R203MaGgaTg3764937649AY.1020.998224
N203R203MaGgaTg3511935119AY.260.994225
N203R203MaGgaTg3190531905AY.470.99241
N203R203MaGgaTg2810828108AY.1190.992444
N203R203MaGgaTg2679926799AY.1200.996356
N203R203MaGgaTg2673426734AY.9.20.981929
N203R203MaGgaTg2567225672AY.200.997746
N203R203MaGgaTg2503525035AY.39.10.991721
N203R203MaGgaTg2455824558AY.420.987971
N203R203MaGgaTg2426324263AY.60.997902
N203R203MaGgaTg2144421444AY.1000.986566
N203R203MaGgaTg2026820268AY.98.10.981596
N203R203MaGgaTg1699316993AY.750.951989
N203R203MaGgaTg1585715857AY.1180.993422
N203R203MaGgaTg1544015440AY.270.999288
N203R203MaGgaTg1487114871AY.330.993055
N203R203MaGgaTg1479314793AY.90.999932
N203R203MaGgaTg1372513725AY.46.60.991046
N203R203MaGgaTg1314413144AY.230.916789
N203R203MaGgaTg1264012640AY.980.998499
N203R203MaGgaTg1183411834AY.9.10.99079
N203R203MaGgaTg1172011720AY.1170.990534
N203R203MaGgaTg1134711347AY.140.99868
N203R203MaGgaTg1108811088AY.3.10.945349
N203R203MaGgaTg1073510735AY.99.20.98931
N203R203MaGgaTg1040910409AY.540.992468
N203R203MaGgaTg1025610256AY.340.994473
N203R203MaGgaTg95159515AY.610.996961
N203R203MaGgaTg94269426AY.460.981057
N203R203MaGgaTg92619261AY.4.50.995485
N203R203MaGgaTg88478847AY.7.10.99707
N203R203MaGgaTg88368836AY.1100.995718
N203R203MaGgaTg85958595AY.740.993986
N203R203MaGgaTg78017801AY.450.949258
N203R203MaGgaTg73947394B.1.617.10.953572
N203R203MaGgaTg73847384AY.1210.999188
N203R203MaGgaTg69876987AY.1130.994874
N203R203MaGgaTg66956695AY.360.992293
N203R203MaGgaTg66406640AY.4.2.10.989273
N203R203MaGgaTg60746074AY.46.40.999177
N203R203MaGgaTg58685868AY.130.944623
N203R203MaGgaTg54595459AY.1110.999817
N203R203MaGgaTg53505350AY.690.998693
N203R203MaGgaTg52335233AY.75.10.943563
N203R203MaGgaTg51015101AY.70.999804
N203R203MaGgaTg50405040AY.46.51
N203R203MaGgaTg47344734AY.700.987073
N203R203MaGgaTg45334533AY.29.10.999559
N203R203MaGgaTg43024302AY.1140.994222
N203R203MaGgaTg42854285AY.350.998602
N203R203MaGgaTg36603660AY.930.999454
N203R203MaGgaTg36273627AY.680.992883
N203R203MaGgaTg35813581AY.5.40.990869
N203R203MaGgaTg34433443AY.1160.987382
N203R203MaGgaTg34063406AY.530.979298
N203R203MaGgaTg33603360AY.410.987654
N203R203MaGgaTg31973197AY.116.10.99564
N203R203MaGgaTg31613161AY.370.999052
N203R203MaGgaTg30893089AY.120.10.991653
N203R203MaGgaTg30723072AY.920.882505
N203R203MaGgaTg29812981AY.1060.998326
N203R203MaGgaTg29072907AY.120.918774
N203R203MaGgaTg28522852AY.5.30.962213
N203R203MaGgaTg28072807AY.20.999644
N203R203MaGgaTg26302630AY.160.998481
N203R203MaGgaTg25822582AY.630.998839
N203R203MaGgaTg25212521AY.10.997626
N203R203MaGgaTg24662466B.10.022587
N203R203MaGgaTg24262426AY.4.40.992635
N203R203MaGgaTg23982398AY.300.948951
N203R203MaGgaTg23952395AY.23.10.999583
N203R203MaGgaTg23182318AY.240.999138
N203R203MaGgaTg23022302AY.850.98334
N203R203MaGgaTg22872287AY.620.996514
N203R203MaGgaTg22772277AY.840.996063
N203R203MaGgaTg22282228AY.940.986277
N203R203MaGgaTg21452145AY.1070.999534
N203R203MaGgaTg21442144AY.670.995357
N203R203MaGgaTg21362136AY.480.993488
N203R203MaGgaTg21152115AY.16.10.993891
N203R203MaGgaTg21032103AY.710.99905
N203R203MaGgaTg19921992AY.1010.976949
N203R203MaGgaTg19841984AY.380.990514
N203R203MaGgaTg19621962AY.120.2.10.977578
N203R203MaGgaTg19601960AY.34.10.99949
N203R203MaGgaTg18871887AY.101
N203R203MaGgaTg18741874AY.320.99787
N203R203MaGgaTg17861786AY.7.20.998881
N203R203MaGgaTg17841784AY.590.944915
N203R203MaGgaTg16801680AY.641
N203R203MaGgaTg16491649AY.80.999394
N203R203MaGgaTg15701570AY.46.20.997459
N203R203MaGgaTg15521552AY.1050.998071
N203R203MaGgaTg15221522AY.570.998688
N203R203MaGgaTg15041504AY.650.801706
N203R203MaGgaTg14981498AY.730.996673
N203R203MaGgaTg14591459AY.900.998631
N203R203MaGgaTg13801380AY.39.1.11
N203R203MaGgaTg13551355AY.910.989774
N203R203MaGgaTg13521352AY.1091
N203R203MaGgaTg13521352AY.4.10.99705
N203R203MaGgaTg12491249AY.500.998401
N203R203MaGgaTg12301230AY.950.936073
N203R203MaGgaTg12041204AY.860.99917
N203R203MaGgaTg12001200AY.870.999167
N203R203MaGgaTg11811181AY.4.30.994108
N203R203MaGgaTg11241124AY.880.993811
N203R203MaGgaTg10971097AY.510.997273
N203R203MaGgaTg10791079AY.550.989908
N203R203MaGgaTg10691069AY.46.30.998133
N203R203MaGgaTg10301030AY.580.934664
N203R203MaGgaTg999999AY.600.937148
N203R203MaGgaTg971971AY.46.10.99692
N203R203MaGgaTg933933AY.660.997861
N203R203MaGgaTg907907AY.520.738599
N203R203MaGgaTg904904AY.1080.996692
N203R203MaGgaTg878878AY.770.989853
N203R203MaGgaTg873873AY.190.995439
N203R203MaGgaTg869869AY.800.980813
N203R203MaGgaTg837837AY.990.878279
N203R203MaGgaTg824824AY.790.997579
N203R203MaGgaTg761761AY.120.20.978149
N203R203MaGgaTg746746AY.110.998661
N203R203MaGgaTg738738AY.400.711668
N203R203MaGgaTg737737AY.821
N203R203MaGgaTg735735AY.721
N203R203MaGgaTg649649AY.39.21
N203R203MaGgaTg644644AY.780.992296
N203R203MaGgaTg643643AY.99.10.998447
N203R203MaGgaTg623623AY.561
N203R203MaGgaTg580580AY.831
N203R203MaGgaTg565565AY.970.960884
N203R203MaGgaTg529529AY.281
N203R203MaGgaTg526526AY.210.998102
N203R203MaGgaTg506506AY.9.2.11
N203R203MaGgaTg504504AY.1041
N203R203MaGgaTg502502AY.811
N203R203MaGgaTg478478AY.221
N203R203MaGgaTg450450AY.151
N203R203MaGgaTg405405AY.5.20.997537
N203R203MaGgaTg384384AY.960.79668
N203R203MaGgaTg315315B.1.617.30.940299
N203R203MaGgaTg313313AY.491
N203R203MaGgaTg266266AY.5.11
N203R203MaGgaTg246246AY.91.11
N203R203MaGgaTg207207AY.761
N203R203MaGgaTg204204AY.891
N203R203MaGgaTg192192AY.1151
N203R203MaGgaTg166166B.1.2140.608059
N203R203MaGgaTg122122AY.171
N203R203MaGgaTg117117B.1.1890.502146
N203R203MaGgaTg9999AY.181
N203R203MaGgaTg9393B.1.1.70.000083
N203R203MaGgaTg7070B0.008947
N203R203MaGgaTg6363B.1.20.000555
N203R203MaGgaTg5454AY.311
N203R203MaGgaTg5252P.10.000819
N203R203MaGgaTg2727B.1.10.00049
N203R203MaGgaTg2020B.1.177.180.023202
N203R203MaGgaTg1919B.1.177.730.010759
N203R203MaGgaTg1818B.1.3510.000535
N203R203MaGgaTg1515B.1.36.180.006303
N203R203MaGgaTg1515B.1.6210.001328
N203R203MaGgaTg1414B.1.2820.208955
N203R203MaGgaTg1313B.1.3240.020867
N203R203MaGgaTg1313B.1.5260.000306
N203R203MaGgaTg1111B.1.1.4320.013924
N203R203MaGgaTg1111B.1.5250.001245
N203R203MaGgaTg1010B.1.5960.000871
N203R203MaGgaTg99P.1.120.004356
N203R203MaGgaTg88B.1.3490.005718
N203R203MaGgaTg77B.1.2470.104478
N203R203MaGgaTg77B.1.4410.067308
N203R203MaGgaTg77B.1.6280.002467
N203R203MaGgaTg77P.1.10.002224
N203R203MaGgaTg66B.1.3750.004918
N203R203MaGgaTg66B.1.4590.02449
N203R203MaGgaTg55B.1.1600.000156
N203R203MaGgaTg55P.1.170.000809
N203R203MaGgaTg55P.1.70.001596
N203R203MaGgaTg44B.1.1.3060.001754
N203R203MaGgaTg44B.1.1120.020725
N203R203MaGgaTg44B.1.2210.000284
N203R203MaGgaTg44B.1.5760.003626
N203R203MaGgaTg44C.370.000464
N203R203MaGgaTg330.166667
N203R203MaGgaTg33A0.001161
N203R203MaGgaTg33A.10.000846
N203R203MaGgaTg33B.1.1.280.000934
N203R203MaGgaTg33B.1.5800.012195
N203R203MaGgaTg33C.37.10.007853
N203R203MaGgaTg22B.1.1.3180.000604
N203R203MaGgaTg22B.1.1.3260.003521
N203R203MaGgaTg22B.1.1.5230.003125
N203R203MaGgaTg22B.1.1770.000026
N203R203MaGgaTg22B.1.177.800.003824
N203R203MaGgaTg22B.1.4970.00063
N203R203MaGgaTg22B.1.5030.004975
N203R203MaGgaTg22C.36.3.10.005435
N203R203MaGgaTg22P.1.100.000539
N203R203MaGgaTg22P.1.150.000465
N203R203MaGgaTg11AZ.20.000821
N203R203MaGgaTg11B.1.1.2360.006897
N203R203MaGgaTg11B.1.1.3010.001179
N203R203MaGgaTg11B.1.1.3070.002532
N203R203MaGgaTg11B.1.1.4480.002033
N203R203MaGgaTg11B.1.1.5190.00004
N203R203MaGgaTg11B.1.1.5280.004808
N203R203MaGgaTg11B.1.1310.008772
N203R203MaGgaTg11B.1.1700.00431
N203R203MaGgaTg11B.1.177.100.000878
N203R203MaGgaTg11B.1.177.70.000165
N203R203MaGgaTg11B.1.177.810.000189
N203R203MaGgaTg11B.1.1790.003759
N203R203MaGgaTg11B.1.2180.005155
N203R203MaGgaTg11B.1.2340.000132
N203R203MaGgaTg11B.1.3010.005917
N203R203MaGgaTg11B.1.3350.010309
N203R203MaGgaTg11B.1.351.50.0006
N203R203MaGgaTg11B.1.3550.011111
N203R203MaGgaTg11B.1.360.000146
N203R203MaGgaTg11B.1.36.290.000517
N203R203MaGgaTg11B.1.36.80.001
N203R203MaGgaTg11B.1.3800.006623
N203R203MaGgaTg11B.1.4000.000429
N203R203MaGgaTg11B.1.4290.000024
N203R203MaGgaTg11B.1.4320.011236
N203R203MaGgaTg11B.1.4330.003195
N203R203MaGgaTg11B.1.4620.007246
N203R203MaGgaTg11B.1.4850.014925
N203R203MaGgaTg11B.1.5510.00129
N203R203MaGgaTg11B.1.5540.004405
N203R203MaGgaTg11B.1.5750.000303
N203R203MaGgaTg11B.1.5810.009434
N203R203MaGgaTg11B.1.5930.01087
N203R203MaGgaTg11B.1.5950.000261
N203R203MaGgaTg11B.1.6230.000536
N203R203MaGgaTg11B.1.6330.041667
N203R203MaGgaTg11B.1.6370.000073
N203R203MaGgaTg11B.1.80.001972
N203R203MaGgaTg11B.550.00295
N203R203MaGgaTg11C.1.20.004255
N203R203MaGgaTg11C.36.30.000567
N203R203MaGgaTg11P.30.001595
N203R203MaGgaTg11Q.10.000126

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.