CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : CodonNum = 199 & Codon = ccT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N199P199PsynccAccT10984930.44899828868-28870

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N199P199PccAccT4931098All0.000094
N199P199PccAccT1247AY.260.000028
N199P199PccAccT105105B.1.3571
N199P199PccAccT79102B.1.1.70.000071
N199P199PccAccT8888B.1.36.360.05298
N199P199PccAccT5258AY.250.000313
N199P199PccAccT445AY.440.000024
N199P199PccAccT444AY.1020.000106
N199P199PccAccT840B.1.617.20.00003
N199P199PccAccT1636AY.40.000025
N199P199PccAccT2424B.1.617.10.003095
N199P199PccAccT1123B.10.000101
N199P199PccAccT420AY.1030.000025
N199P199PccAccT1215AY.30.000119
N199P199PccAccT315AY.430.000013
N199P199PccAccT211AY.98.10.000097
N199P199PccAccT67AY.470.000187
N199P199PccAccT55AY.1170.000423
N199P199PccAccT25B.1.2580.000133
N199P199PccAccT25P.10.000032
N199P199PccAccT44AY.330.000267
N199P199PccAccT44AY.390.000099
N199P199PccAccT34AY.720.004082
N199P199PccAccT14B.1.1770.000013
N199P199PccAccT130.055556
N199P199PccAccT13B.1.10.000018
N199P199PccAccT33B.1.1.2320.005445
N199P199PccAccT33B.1.1.3690.001339
N199P199PccAccT13B.1.360.000146
N199P199PccAccT33B.1.438.10.000322
N199P199PccAccT33B.1.5260.000071
N199P199PccAccT22AY.1000.000092
N199P199PccAccT12AY.450.000122
N199P199PccAccT12AY.5.30.000337
N199P199PccAccT12AY.530.000288
N199P199PccAccT12AY.9.10.000084
N199P199PccAccT22AY.940.000885
N199P199PccAccT12B.1.1.5190.00004
N199P199PccAccT22B.1.177.120.000303
N199P199PccAccT22B.1.2340.000264
N199P199PccAccT12B.1.4270.00005
N199P199PccAccT22B.1.4290.000047
N199P199PccAccT22B.1.6370.000146
N199P199PccAccT11AY.1160.000287
N199P199PccAccT11AY.120.000316
N199P199PccAccT11AY.3.10.000085
N199P199PccAccT11AY.540.000095
N199P199PccAccT11AY.610.000105
N199P199PccAccT11AY.70.000196
N199P199PccAccT11AY.840.000437
N199P199PccAccT11AY.980.000079
N199P199PccAccT11B.1.1.2940.001266
N199P199PccAccT11B.1.1.3720.000689
N199P199PccAccT11B.1.1.4850.016667
N199P199PccAccT11B.1.160.260.002421
N199P199PccAccT11B.1.3360.002439
N199P199PccAccT11B.1.36.170.000494
N199P199PccAccT11B.1.4700.001404
N199P199PccAccT11B.1.4970.000315
N199P199PccAccT11C.36.30.000567
N199P199PccAccT11P.1.10.000318
N199P199PccAccT11P.30.001595
N199P199PccAccT11Q.10.000126