CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : CodonNum = 198

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N198T198InonsynaCtaTt13951395128865-28867
N198T198TsynacTacC7714640.60181628865-28867
N198T198TsynacTacA7711890.24513628865-28867
N198T198TsynacTacG7711180.15304828865-28867
N198T198NnonsynaCtaAt1631600.98159528865-28867
N198T198NnonsynaCTaAC16330.018404928865-28867
N198T198deldelACT---7373128865-28867
N198T198AnonsynActGct5858128865-28867
N198T198PnonsynActCct16120.7528865-28867
N198T198PnonsynAcTCcC1620.12528865-28867
N198T198PnonsynAcTCcA1610.062528865-28867
N198T198PnonsynAcTCcG1610.062528865-28867
N198T198SnonsynaCtaGt1260.528865-28867
N198T198SnonsynActTct1250.41666728865-28867
N198T198SnonsynaCTaGC1210.083333328865-28867
N198T198del1delacTac-540.828865-28867
N198T198del1delaCta-t510.228865-28867
N198T198HnonsynACTCAC22128865-28867
N198T198KnonsynaCTaAG210.528865-28867
N198T198KnonsynaCTaAA210.528865-28867
N198T198LnonsynACtCTt11128865-28867
N198T198del2delACT--N11128865-28867
N198T198RnonsynACtCGt11128865-28867

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N198T198IaCtaTt13951395All0.000267
N198T198TacTacC464771All0.000089
N198T198TacTacA189771All0.000036
N198T198TacTacG118771All0.000023
N198T198IaCtaTt264264B.1.4690.953069
N198T198IaCtaTt215215AY.40.000335
N198T198NaCtaAt160163All0.000031
N198T198NaCTaAC3163All0.000001
N198T198TacTacA95127AY.250.000571
N198T198TacTacC26127AY.250.000156
N198T198TacTacG6127AY.250.000036
N198T198IaCtaTt115115B.1.1.70.000103
N198T198IaCtaTt8787AY.1030.00054
N198T198IaCtaTt8787B.10.000797
N198T198TacTacC4980B.1.1.70.000044
N198T198TacTacA1880B.1.1.70.000016
N198T198TacTacG1380B.1.1.70.000012
N198T198delACT---7373All0.000014
N198T198IaCtaTt6363B.1.617.20.000237
N198T198AActGct5858All0.000011
N198T198IaCtaTt5555AY.430.000244
N198T198IaCtaTt5151B.1.2230.141667
N198T198TacTacC4150AY.1030.000255
N198T198TacTacA750AY.1030.000043
N198T198TacTacG250AY.1030.000012
N198T198IaCtaTt4545AY.1020.001193
N198T198TacTacC3234AY.40.00005
N198T198TacTacG134AY.40.000002
N198T198TacTacA134AY.40.000002
N198T198NaCtaAt3232B.1.1.70.000029
N198T198IaCtaTt3131B.1.10.000562
N198T198TacTacC2930B.1.10.000526
N198T198TacTacG130B.1.10.000018
N198T198IaCtaTt3030P.1.10.00953
N198T198TacTacA2729AY.1020.000716
N198T198TacTacC229AY.1020.000053
N198T198TacTacC2829AY.30.000278
N198T198TacTacA129AY.30.00001
N198T198TacTacA1728B.1.617.20.000064
N198T198TacTacC1128B.1.617.20.000041
N198T198TacTacG1927B.1.20.000167
N198T198TacTacC827B.1.20.00007
N198T198TacTacC2222B.1.1.280.006847
N198T198IaCtaTt2222B.1.1.3480.017516
N198T198NaCtaAt2222B.1.5260.000517
N198T198TacTacG2022P.10.000315
N198T198TacTacC222P.10.000032
N198T198IaCtaTt1818B.1.20.000158
N198T198TacTacC1818Q.10.002274
N198T198IaCtaTt1717B.1.1390.012463
N198T198TacTacG1617B.1.4290.000376
N198T198TacTacC117B.1.4290.000024
N198T198PActCct1216All0.000002
N198T198PAcTCcC216All0
N198T198PAcTCcG116All0
N198T198PAcTCcA116All0
N198T198IaCtaTt1616AY.440.000097
N198T198IaCtaTt1616P.10.000252
N198T198AActGct1515AY.250.00009
N198T198NaCtaAt1414AY.40.000022
N198T198SaCtaGt612All0.000001
N198T198SActTct512All0.000001
N198T198SaCTaGC112All0
N198T198TacTacC1112AY.1190.000388
N198T198TacTacA112AY.1190.000035
N198T198NaCtaAt1212AY.250.000072
N198T198delACT---1212AY.60.000494
N198T198TacTacG1212B.1.177.650.007984
N198T198IaCtaTt1212B.1.258.170.001248
N198T198delACT---1111B.10.000101
N198T198TacTacC1111B.10.000101
N198T198IaCtaTt1010B.1.1.3180.003018
N198T198TacTacC1010B.1.1.5190.000397
N198T198delACT---1010B.1.1.70.000009
N198T198TacTacC1010B.1.177.500.046948
N198T198NaCtaAt99AY.1030.000056
N198T198TacTacG99AY.120.10.002889
N198T198TacTacC49AY.440.000024
N198T198TacTacA39AY.440.000018
N198T198TacTacG29AY.440.000012
N198T198TacTacC88A0.003096
N198T198IaCtaTt88AY.1180.000501
N198T198IaCtaTt88AY.200.000311
N198T198NaCtaAt88AY.440.000049
N198T198AActGct88B.1.1.70.000007
N198T198IaCtaTt88B.1.1770.000105
N198T198TacTacC68B.1.2580.000399
N198T198TacTacG28B.1.2580.000133
N198T198NaCtaAt88B.1.617.20.00003
N198T198IaCtaTt88B.1.6370.000585
N198T198AActGct77AY.1180.000439
N198T198IaCtaTt77AY.390.000173
N198T198IaCtaTt77AY.50.000145
N198T198IaCtaTt77B.1.1.250.00398
N198T198IaCtaTt77B.1.360.001021
N198T198IaCtaTt77B.1.4800.017413
N198T198TacTacC77P.1.110.071429
N198T198TacTacC260.111111
N198T198TacTacG260.111111
N198T198TacTacA260.111111
N198T198IaCtaTt66AY.1190.000212
N198T198NaCtaAt66AY.530.001725
N198T198TacTacC66B.1.1770.000079
N198T198IaCtaTt66B.1.2430.000418
N198T198TacTacC66B.1.4080.02214
N198T198IaCtaTt66B.1.466.20.002347
N198T198PAcTCcC250.111111
N198T198PAcTCcG150.055556
N198T198PAcTCcA150.055556
N198T198PActCct150.055556
N198T198del1acTac-45All0.000001
N198T198del1aCta-t15All0
N198T198NaCtaAt55AY.1020.000133
N198T198delACT---55AY.250.00003
N198T198TacTacC55AY.420.000201
N198T198IaCtaTt55B.1.1.2770.003794
N198T198NaCtaAt55B.1.1600.000156
N198T198TacTacC45B.1.2430.000278
N198T198TacTacG15B.1.2430.00007
N198T198IaCtaTt55B.1.258.90.025
N198T198TacTacC55B.1.3820.044643
N198T198IaCtaTt55B.400.001821
N198T198delACT---55D.20.000375
N198T198IaCtaTt55D.20.000375
N198T198TacTacC45Q.30.00058
N198T198TacTacA15Q.30.000145
N198T198AActGct44AY.1030.000025
N198T198IaCtaTt44AY.1210.000541
N198T198IaCtaTt44AY.140.000352
N198T198TacTacC34AY.200.000117
N198T198TacTacG14AY.200.000039
N198T198IaCtaTt44AY.290.000063
N198T198AActGct44AY.29.10.000882
N198T198TacTacC44AY.690.000747
N198T198IaCtaTt44AY.740.000463
N198T198NaCtaAt44AY.98.10.000194
N198T198AActGct44B.10.000037
N198T198NaCtaAt44B.1.10.000073
N198T198IaCtaTt44B.1.160.100.032258
N198T198TacTacC44B.1.177.440.002076
N198T198TacTacC44B.1.177.720.013559
N198T198IaCtaTt44C.36.20.137931
N198T198NaCTaAC230.111111
N198T198NaCtaAt130.055556
N198T198IaCtaTt33AY.250.000018
N198T198TacTacC23AY.260.000057
N198T198TacTacA13AY.260.000028
N198T198TacTacC33AY.290.000047
N198T198IaCtaTt33AY.30.00003
N198T198SActTct23AY.40.000003
N198T198SaCtaGt13AY.40.000002
N198T198TacTacC23AY.430.000009
N198T198TacTacG13AY.430.000004
N198T198TacTacA33AY.46.60.000217
N198T198IaCtaTt33AY.470.000093
N198T198TacTacA33AY.5.30.001012
N198T198IaCtaTt33AY.540.000286
N198T198NaCtaAt33AY.690.00056
N198T198TacTacC23AY.75.10.000361
N198T198TacTacG13AY.75.10.00018
N198T198TacTacC33B.1.1.4340.001046
N198T198SaCtaGt33B.1.1.70.000003
N198T198TacTacC33B.1.1600.000094
N198T198TacTacC33B.1.177.750.003122
N198T198IaCtaTt33B.1.1950.015075
N198T198IaCtaTt33B.1.2100.006397
N198T198IaCtaTt33B.1.2210.000213
N198T198IaCtaTt33B.1.4620.021739
N198T198TacTacC33C.310.053571
N198T198IaCtaTt33C.36.30.001702
N198T198HACTCAC220.111111
N198T198del1acTac-220.111111
N198T198KaCTaAA120.055556
N198T198KaCTaAG120.055556
N198T198HACTCAC22All0
N198T198KaCTaAA12All0
N198T198KaCTaAG12All0
N198T198TacTacC12AY.1000.000046
N198T198TacTacG12AY.1000.000046
N198T198NaCtaAt22AY.1190.000071
N198T198IaCtaTt22AY.300.000791
N198T198IaCtaTt22AY.370.000632
N198T198AActGct22AY.40.000003
N198T198TacTacC22AY.4.20.000043
N198T198PActCct22AY.4.20.000043
N198T198delACT---22AY.400.001929
N198T198IaCtaTt22AY.420.00008
N198T198AActGct22AY.430.000009
N198T198PActCct22AY.430.000009
N198T198NaCtaAt22AY.430.000009
N198T198IaCtaTt22AY.450.000243
N198T198NaCtaAt22AY.460.000208
N198T198IaCtaTt22AY.460.000208
N198T198TacTacA12AY.460.000104
N198T198TacTacC12AY.460.000104
N198T198delACT---22AY.500.001599
N198T198TacTacC22AY.7.10.000225
N198T198TacTacA12AY.750.000056
N198T198TacTacC12AY.750.000056
N198T198TacTacA22AY.780.003082
N198T198IaCtaTt22AY.860.00166
N198T198IaCtaTt22AY.90.000135
N198T198TacTacG22AY.90.000135
N198T198PActCct22AY.9.20.000073
N198T198IaCtaTt22AY.9.20.000073
N198T198NaCtaAt22AY.910.001461
N198T198TacTacA22AZ.20.001642
N198T198TacTacC22B0.000256
N198T198IaCtaTt22B0.000256
N198T198SaCTaGC12B.10.000009
N198T198SActTct12B.10.000009
N198T198TacTacC22B.1.110.30.001437
N198T198NaCtaAt22B.1.20.000018
N198T198delACT---22B.1.20.000018
N198T198IaCtaTt22B.1.2580.000133
N198T198delACT---22B.1.3510.000059
N198T198TacTacG12B.1.3510.00003
N198T198TacTacC12B.1.3510.00003
N198T198TacTacC22B.1.4270.000101
N198T198TacTacC22B.1.4970.00063
N198T198AActGct22B.1.5260.000047
N198T198TacTacC22B.1.617.10.000258
N198T198TacTacG22B.1.6370.000146
N198T198NaCtaAt22B.1.6370.000146
N198T198IaCtaTt22B.1.90.012346
N198T198TacTacC22C.370.000232
N198T198TacTacC22D.20.00015
N198T198IaCtaTt22P.1.150.000465
N198T198SaCtaGt22P.1.70.000639
N198T198NaCtaAt22P.30.00319
N198T198IaCtaTt11A.2.50.000499
N198T198del2ACT--N11All0
N198T198RACtCGt11All0
N198T198LACtCTt11All0
N198T198IaCtaTt11AY.1110.000183
N198T198TacTacC11AY.1130.000142
N198T198IaCtaTt11AY.1130.000142
N198T198IaCtaTt11AY.1140.000231
N198T198TacTacC11AY.1200.000037
N198T198IaCtaTt11AY.1200.000037
N198T198IaCtaTt11AY.160.00038
N198T198TacTacC11AY.160.00038
N198T198IaCtaTt11AY.230.00007
N198T198IaCtaTt11AY.23.10.000417
N198T198IaCtaTt11AY.240.000431
N198T198IaCtaTt11AY.260.000028
N198T198AActGct11AY.290.000016
N198T198NaCtaAt11AY.290.000016
N198T198IaCtaTt11AY.29.10.000221
N198T198NaCtaAt11AY.30.00001
N198T198TacTacA11AY.330.000067
N198T198delACT---11AY.390.000025
N198T198NaCtaAt11AY.390.000025
N198T198PActCct11AY.40.000002
N198T198delACT---11AY.40.000002
N198T198IaCtaTt11AY.4.20.000022
N198T198TacTacG11AY.4.40.000409
N198T198IaCtaTt11AY.4.50.000107
N198T198TacTacC11AY.410.000294
N198T198NaCtaAt11AY.420.00004
N198T198delACT---11AY.430.000004
N198T198delACT---11AY.460.000104
N198T198IaCtaTt11AY.46.20.000635
N198T198IaCtaTt11AY.46.40.000165
N198T198IaCtaTt11AY.46.60.000072
N198T198TacTacC11AY.470.000031
N198T198del1acTac-11AY.480.000465
N198T198IaCtaTt11AY.5.30.000337
N198T198IaCtaTt11AY.5.40.000277
N198T198IaCtaTt11AY.520.000814
N198T198IaCtaTt11AY.580.000907
N198T198TacTacC11AY.590.00053
N198T198TacTacC11AY.60.000041
N198T198IaCtaTt11AY.60.000041
N198T198TacTacC11AY.650.000533
N198T198TacTacC11AY.700.000209
N198T198IaCtaTt11AY.750.000056
N198T198delACT---11AY.750.000056
N198T198IaCtaTt11AY.75.10.00018
N198T198NaCTaAC11AY.790.001211
N198T198TacTacC11AY.790.001211
N198T198delACT---11AY.9.20.000037
N198T198NaCtaAt11AY.9.20.000037
N198T198TacTacC11AY.9.20.000037
N198T198IaCtaTt11AY.980.000079
N198T198IaCtaTt11AY.99.20.000092
N198T198del1acTac-11B0.000128
N198T198NaCtaAt11B.10.000009
N198T198IaCtaTt11B.1.1.10.000327
N198T198TacTacC11B.1.1.1410.002012
N198T198IaCtaTt11B.1.1.1760.000439
N198T198TacTacC11B.1.1.1940.00495
N198T198TacTacC11B.1.1.2140.000055
N198T198LACtCTt11B.1.1.2160.00089
N198T198AActGct11B.1.1.250.000569
N198T198TacTacC11B.1.1.2790.001121
N198T198IaCtaTt11B.1.1.280.000311
N198T198TacTacC11B.1.1.2840.000107
N198T198TacTacC11B.1.1.30.008696
N198T198IaCtaTt11B.1.1.3060.000438
N198T198TacTacC11B.1.1.3060.000438
N198T198IaCtaTt11B.1.1.3170.000412
N198T198TacTacG11B.1.1.330.000421
N198T198TacTacC11B.1.1.3690.000446
N198T198delACT---11B.1.1.4320.001266
N198T198IaCtaTt11B.1.1.4660.008696
N198T198AActGct11B.1.1.5190.00004
N198T198IaCtaTt11B.1.1.5190.00004
N198T198NaCtaAt11B.1.1.5190.00004
N198T198IaCtaTt11B.1.1.700.000341
N198T198IaCtaTt11B.1.110.30.000718
N198T198TacTacC11B.1.160.180.007299
N198T198IaCtaTt11B.1.160.200.008929
N198T198delACT---11B.1.1770.000013
N198T198TacTacC11B.1.177.210.000076
N198T198AActGct11B.1.177.630.002703
N198T198TacTacC11B.1.177.730.000566
N198T198IaCtaTt11B.1.177.770.000726
N198T198TacTacC11B.1.177.850.005435
N198T198TacTacC11B.1.177.90.001332
N198T198PActCct11B.1.20.000009
N198T198SActTct11B.1.20.000009
N198T198del2ACT--N11B.1.20.000009
N198T198TacTacC11B.1.220.001318
N198T198TacTacC11B.1.2210.000071
N198T198delACT---11B.1.2210.000071
N198T198IaCtaTt11B.1.2320.000537
N198T198IaCtaTt11B.1.2400.000216
N198T198NaCtaAt11B.1.2580.000067
N198T198TacTacC11B.1.258.240.010753
N198T198TacTacC11B.1.258.70.001912
N198T198AActGct11B.1.2600.003344
N198T198IaCtaTt11B.1.2760.016949
N198T198IaCtaTt11B.1.2810.021739
N198T198IaCtaTt11B.1.3110.000275
N198T198IaCtaTt11B.1.3370.005587
N198T198IaCtaTt11B.1.3510.00003
N198T198TacTacC11B.1.351.20.000303
N198T198TacTacC11B.1.351.50.0006
N198T198TacTacC11B.1.360.000146
N198T198NaCtaAt11B.1.360.000146
N198T198TacTacG11B.1.3670.000792
N198T198IaCtaTt11B.1.3670.000792
N198T198IaCtaTt11B.1.3960.000706
N198T198AActGct11B.1.4000.000429
N198T198delACT---11B.1.416.10.001563
N198T198NaCtaAt11B.1.416.10.001563
N198T198TacTacC11B.1.4170.028571
N198T198IaCtaTt11B.1.4200.010417
N198T198delACT---11B.1.4270.00005
N198T198PActCct11B.1.4270.00005
N198T198IaCtaTt11B.1.4280.00102
N198T198TacTacC11B.1.438.10.000107
N198T198delACT---11B.1.4650.003802
N198T198TacTacC11B.1.466.20.000391
N198T198TacTacA11B.1.5250.000113
N198T198delACT---11B.1.5250.000113
N198T198TacTacC11B.1.5260.000024
N198T198IaCtaTt11B.1.5610.000397
N198T198IaCtaTt11B.1.5760.000907
N198T198delACT---11B.1.5760.000907
N198T198IaCtaTt11B.1.5780.017857
N198T198IaCtaTt11B.1.5820.000491
N198T198IaCtaTt11B.1.5880.00091
N198T198NaCtaAt11B.1.5880.00091
N198T198TacTacC11B.1.5950.000261
N198T198IaCtaTt11B.1.595.10.005848
N198T198IaCtaTt11B.1.5960.000087
N198T198delACT---11B.1.5960.000087
N198T198IaCtaTt11B.1.6020.006536
N198T198SActTct11B.1.6060.006024
N198T198delACT---11B.1.617.10.000129
N198T198del1aCta-t11B.1.617.20.000004
N198T198AActGct11B.1.617.20.000004
N198T198delACT---11B.1.617.20.000004
N198T198PActCct11B.1.617.20.000004
N198T198RACtCGt11B.1.617.20.000004
N198T198AActGct11B.1.6270.00202
N198T198PActCct11B.1.6330.041667
N198T198IaCtaTt11B.30.000831
N198T198TacTacA11B.6.60.000889
N198T198AActGct11C.300.001727
N198T198delACT---11C.37.10.002618
N198T198delACT---11P.10.000016
N198T198AActGct11P.10.000016
N198T198NaCtaAt11P.10.000016
N198T198delACT---11P.1.120.000484
N198T198delACT---11P.1.140.000048
N198T198IaCtaTt11P.1.170.000162
N198T198IaCtaTt11P.1.20.001156
N198T198IaCtaTt11P.1.70.000319
N198T198delACT---11P.1.80.004785
N198T198TacTacC11P.70.004367
N198T198IaCtaTt11Q.10.000126
N198T198NaCtaAt11Q.10.000126
N198T198TacTacC11R.10.00009
N198T198IaCtaTt11R.10.00009