CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
N | 194 | S194L | nonsyn | tCa | tTa | 98200 | 98184 | 0.999837 | 28853-28855 | |
N | 194 | S194L | nonsyn | TCa | CTa | 98200 | 14 | 0.000142566 | 28853-28855 | |
N | 194 | S194L | nonsyn | tCA | tTG | 98200 | 2 | 0.0000203666 | 28853-28855 | |
N | 194 | S194S | syn | tcA | tcG | 1259 | 653 | 0.518666 | 28853-28855 | |
N | 194 | S194S | syn | tcA | tcC | 1259 | 327 | 0.25973 | 28853-28855 | |
N | 194 | S194S | syn | tcA | tcT | 1259 | 279 | 0.221604 | 28853-28855 | |
N | 194 | S194A | nonsyn | Tca | Gca | 853 | 853 | 1 | 28853-28855 | |
N | 194 | S194P | nonsyn | Tca | Cca | 278 | 277 | 0.996403 | 28853-28855 | |
N | 194 | S194P | nonsyn | TcA | CcG | 278 | 1 | 0.00359712 | 28853-28855 | |
N | 194 | S194del | del | TCA | --- | 107 | 107 | 1 | 28853-28855 | |
N | 194 | S194T | nonsyn | Tca | Aca | 25 | 25 | 1 | 28853-28855 | |
N | 194 | S194X | nonsyn | tCa | tAa | 24 | 21 | 0.875 | 28853-28855 | |
N | 194 | S194X | nonsyn | tCa | tGa | 24 | 2 | 0.0833333 | 28853-28855 | |
N | 194 | S194X | nonsyn | tCA | tAG | 24 | 1 | 0.0416667 | 28853-28855 | |
N | 194 | S194del1 | del | tCa | t-a | 14 | 13 | 0.928571 | 28853-28855 | |
N | 194 | S194del1 | del | tcA | tc- | 14 | 1 | 0.0714286 | 28853-28855 | |
N | 194 | S194F | nonsyn | tCA | tTT | 3 | 3 | 1 | 28853-28855 | |
N | 194 | S194V | nonsyn | TCa | GTa | 3 | 3 | 1 | 28853-28855 | |
N | 194 | S194del2 | del | TCa | --a | 2 | 1 | 0.5 | 28853-28855 | |
N | 194 | S194del2 | del | tCA | t-- | 2 | 1 | 0.5 | 28853-28855 | |
N | 194 | S194I | nonsyn | TCa | ATa | 1 | 1 | 1 | 28853-28855 | |
N | 194 | S194K | nonsyn | TCa | AAa | 1 | 1 | 1 | 28853-28855 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
N | 194 | S194L | tCa | tTa | 98184 | 98200 | All | 0.018779 |
N | 194 | S194L | TCa | CTa | 14 | 98200 | All | 0.000003 |
N | 194 | S194L | tCA | tTG | 2 | 98200 | All | 0 |
N | 194 | S194L | tCa | tTa | 14289 | 14289 | B.1.243 | 0.994294 |
N | 194 | S194L | tCa | tTa | 12569 | 12569 | B.1 | 0.115126 |
N | 194 | S194L | tCa | tTa | 7491 | 7491 | B.1.234 | 0.988389 |
N | 194 | S194L | tCa | tTa | 6764 | 6764 | B.1.36 | 0.986869 |
N | 194 | S194L | tCa | tTa | 4531 | 4531 | B.1.240 | 0.976719 |
N | 194 | S194L | tCa | tTa | 2794 | 2794 | B.1.628 | 0.984496 |
N | 194 | S194L | tCa | tTa | 2465 | 2465 | B.1.561 | 0.978563 |
N | 194 | S194L | tCa | tTa | 2375 | 2375 | B.1.36.18 | 0.997899 |
N | 194 | S194L | tCa | tTa | 2255 | 2255 | B.1.400 | 0.967396 |
N | 194 | S194L | tCa | tTa | 2244 | 2244 | B.1.1.7 | 0.002009 |
N | 194 | S194L | tCa | tTa | 2008 | 2008 | B.1.36.17 | 0.992095 |
N | 194 | S194L | tCa | tTa | 1857 | 1857 | B.1.232 | 0.997851 |
N | 194 | S194L | tCa | tTa | 1837 | 1837 | B.1.36.29 | 0.950336 |
N | 194 | S194L | tCa | tTa | 1661 | 1661 | B.1.36.36 | 1 |
N | 194 | S194L | tCa | tTa | 1385 | 1385 | B.1.396 | 0.977417 |
N | 194 | S194L | tCa | tTa | 1310 | 1310 | B.1.36.27 | 1 |
N | 194 | S194L | tCa | tTa | 1269 | 1269 | B.1.409 | 0.991406 |
N | 194 | S194S | tcA | tcG | 653 | 1259 | All | 0.000125 |
N | 194 | S194S | tcA | tcC | 327 | 1259 | All | 0.000063 |
N | 194 | S194S | tcA | tcT | 279 | 1259 | All | 0.000053 |
N | 194 | S194L | tCa | tTa | 1222 | 1222 | B.1.241 | 0.991883 |
N | 194 | S194L | tCa | tTa | 1034 | 1034 | B.1.1.298 | 0.891379 |
N | 194 | S194L | tCa | tTa | 1003 | 1003 | B.1.258.14 | 0.983333 |
N | 194 | S194L | tCa | tTa | 985 | 986 | B.1.36.8 | 0.985 |
N | 194 | S194L | tCA | tTG | 1 | 986 | B.1.36.8 | 0.001 |
N | 194 | S194L | tCa | tTa | 898 | 898 | B.1.389 | 0.8998 |
N | 194 | S194L | tCa | tTa | 857 | 857 | B.1.36.1 | 0.977195 |
N | 194 | S194A | Tca | Gca | 853 | 853 | All | 0.000163 |
N | 194 | S194L | tCa | tTa | 814 | 815 | B.1.36.22 | 0.983092 |
N | 194 | S194L | TCa | CTa | 1 | 815 | B.1.36.22 | 0.001208 |
N | 194 | S194L | tCa | tTa | 783 | 784 | B.1.239 | 0.956044 |
N | 194 | S194L | TCa | CTa | 1 | 784 | B.1.239 | 0.001221 |
N | 194 | S194A | Tca | Gca | 778 | 778 | B.1.126 | 0.992347 |
N | 194 | S194L | tCa | tTa | 753 | 753 | B.1.551 | 0.971613 |
N | 194 | S194L | tCa | tTa | 749 | 749 | B.1.404 | 0.97526 |
N | 194 | S194L | tCa | tTa | 713 | 713 | AY.4 | 0.00111 |
N | 194 | S194L | tCa | tTa | 667 | 667 | B.1.36.16 | 0.950142 |
N | 194 | S194L | tCa | tTa | 649 | 649 | B.1.524 | 0.912799 |
N | 194 | S194L | tCa | tTa | 605 | 605 | B.1.362 | 0.932203 |
N | 194 | S194L | tCa | tTa | 603 | 603 | B.1.36.38 | 0.990148 |
N | 194 | S194L | tCa | tTa | 570 | 570 | B.1.36.31 | 0.998249 |
N | 194 | S194L | tCa | tTa | 531 | 531 | B.1.2 | 0.004676 |
N | 194 | S194L | tCa | tTa | 501 | 501 | B.1.399 | 0.969052 |
N | 194 | S194L | tCa | tTa | 476 | 476 | B.1.236 | 0.977413 |
N | 194 | S194L | tCa | tTa | 463 | 463 | B.1.36.21 | 1 |
N | 194 | S194L | tCa | tTa | 449 | 449 | B.1.36.25 | 0.99117 |
N | 194 | S194L | tCa | tTa | 397 | 397 | B.1.480 | 0.987562 |
N | 194 | S194L | tCa | tTa | 392 | 392 | B.1.36.39 | 0.86918 |
N | 194 | S194L | tCa | tTa | 390 | 390 | B.1.235 | 0.982368 |
N | 194 | S194L | tCa | tTa | 382 | 382 | B.1.36.35 | 0.994792 |
N | 194 | S194L | tCa | tTa | 360 | 360 | B.1.36.37 | 1 |
N | 194 | S194L | tCa | tTa | 350 | 350 | B.1.36.26 | 1 |
N | 194 | S194S | tcA | tcG | 319 | 324 | P.1 | 0.005026 |
N | 194 | S194S | tcA | tcT | 5 | 324 | P.1 | 0.000079 |
N | 194 | S194L | tCa | tTa | 312 | 312 | AY.103 | 0.001937 |
N | 194 | S194L | tCa | tTa | 310 | 310 | B.1.398 | 0.922619 |
N | 194 | S194L | tCa | tTa | 296 | 308 | B.1.36.9 | 0.951768 |
N | 194 | S194L | TCa | CTa | 12 | 308 | B.1.36.9 | 0.038585 |
N | 194 | S194S | tcA | tcC | 277 | 306 | B.1.177 | 0.003647 |
N | 194 | S194S | tcA | tcT | 27 | 306 | B.1.177 | 0.000356 |
N | 194 | S194S | tcA | tcG | 2 | 306 | B.1.177 | 0.000026 |
N | 194 | S194L | tCa | tTa | 306 | 306 | B.1.456 | 1 |
N | 194 | S194L | tCa | tTa | 299 | 299 | B.1.403 | 0.977124 |
N | 194 | S194L | tCa | tTa | 290 | 290 | AY.3 | 0.002884 |
N | 194 | S194P | Tca | Cca | 277 | 278 | All | 0.000053 |
N | 194 | S194P | TcA | CcG | 1 | 278 | All | 0 |
N | 194 | S194L | tCa | tTa | 276 | 276 | B.1.610 | 0.978723 |
N | 194 | S194L | tCa | tTa | 265 | 265 | B.1.408 | 0.97786 |
N | 194 | S194L | tCa | tTa | 261 | 261 | B.45 | 1 |
N | 194 | S194L | tCa | tTa | 245 | 245 | B.1.36.7 | 0.98 |
N | 194 | S194L | tCa | tTa | 219 | 219 | AY.29 | 0.003454 |
N | 194 | S194L | tCa | tTa | 217 | 217 | B.1.558 | 0.990868 |
N | 194 | S194L | tCa | tTa | 212 | 212 | B.1.362.2 | 1 |
N | 194 | S194L | tCa | tTa | 210 | 210 | B.1.617.2 | 0.000791 |
N | 194 | S194L | tCa | tTa | 208 | 208 | B.1.36.10 | 0.995215 |
N | 194 | S194S | tcA | tcT | 109 | 199 | B.1.1.7 | 0.000098 |
N | 194 | S194S | tcA | tcG | 90 | 199 | B.1.1.7 | 0.000081 |
N | 194 | S194L | tCa | tTa | 199 | 199 | B.1.397 | 0.966019 |
N | 194 | S194L | tCa | tTa | 198 | 198 | B.1.88.1 | 0.951923 |
N | 194 | S194L | tCa | tTa | 173 | 173 | B.1.36.28 | 0.994253 |
N | 194 | S194L | tCa | tTa | 168 | 168 | B.1.237 | 0.835821 |
N | 194 | S194L | tCa | tTa | 161 | 161 | B.1.36.24 | 0.993827 |
N | 194 | S194L | tCa | tTa | 160 | 160 | B.1.221 | 0.011365 |
N | 194 | S194L | tCa | tTa | 160 | 160 | B.1.596 | 0.013942 |
N | 194 | S194L | tCa | tTa | 157 | 157 | AY.44 | 0.000956 |
N | 194 | S194L | tCa | tTa | 153 | 153 | B.1.406 | 0.927273 |
N | 194 | S194L | tCa | tTa | 149 | 149 | B.1.602 | 0.973856 |
N | 194 | S194L | tCa | tTa | 133 | 133 | B.1.111 | 0.156287 |
N | 194 | S194L | tCa | tTa | 131 | 131 | B.1.36.33 | 0.992424 |
N | 194 | S194L | tCa | tTa | 131 | 131 | B.1.556 | 0.984962 |
N | 194 | S194L | tCa | tTa | 130 | 130 | B.1.421 | 0.970149 |
N | 194 | S194L | tCa | tTa | 122 | 122 | B.1.1 | 0.002213 |
N | 194 | S194L | tCa | tTa | 122 | 122 | B.1.401 | 1 |
N | 194 | S194L | tCa | tTa | 121 | 121 | B.1.260 | 0.404682 |
N | 194 | S194L | tCa | tTa | 117 | 117 | B.1.606 | 0.704819 |
N | 194 | S194L | tCa | tTa | 112 | 112 | B.1.381 | 0.875 |
N | 194 | S194L | tCa | tTa | 112 | 112 | B.1.609 | 0.053691 |
N | 194 | S194del | TCA | --- | 107 | 107 | All | 0.00002 |
N | 194 | S194L | tCa | tTa | 107 | 107 | B.1.36.19 | 0.990741 |
N | 194 | S194L | tCa | tTa | 104 | 104 | B.1.36.12 | 1 |
N | 194 | S194L | tCa | tTa | 102 | 102 | B.1.229 | 0.990291 |
N | 194 | S194L | tCa | tTa | 101 | 101 | B.1.1.222 | 0.020604 |
N | 194 | S194L | tCa | tTa | 101 | 101 | B.1.402 | 0.990196 |
N | 194 | S194L | tCa | tTa | 99 | 99 | B.1.554 | 0.436123 |
N | 194 | S194L | tCa | tTa | 95 | 95 | B.1.147 | 0.071807 |
N | 194 | S194L | tCa | tTa | 93 | 93 | B.1.36.2 | 1 |
N | 194 | S194L | tCa | tTa | 93 | 93 | B.1.429 | 0.002188 |
N | 194 | S194L | tCa | tTa | 86 | 86 | B.1.116 | 1 |
N | 194 | S194L | tCa | tTa | 80 | 80 | B.1.534 | 1 |
N | 194 | S194P | Tca | Cca | 79 | 79 | B.1.1.7 | 0.000071 |
N | 194 | S194L | tCa | tTa | 79 | 79 | B.1.405 | 0.975309 |
N | 194 | S194L | tCa | tTa | 76 | 76 | B.1.441 | 0.730769 |
N | 194 | S194L | tCa | tTa | 73 | 73 | B | 0.00933 |
N | 194 | S194L | tCa | tTa | 73 | 73 | B.1.550 | 1 |
N | 194 | S194L | tCa | tTa | 69 | 69 | B.1.243.2 | 1 |
N | 194 | S194L | tCa | tTa | 68 | 68 | B.1.160 | 0.002121 |
N | 194 | S194L | tCa | tTa | 68 | 68 | B.1.233 | 0.957746 |
N | 194 | S194L | tCa | tTa | 67 | 67 | B.1.238 | 1 |
N | 194 | S194L | tCa | tTa | 64 | 64 | AY.43 | 0.000284 |
N | 194 | S194L | tCa | tTa | 63 | 63 | B.1.400.1 | 0.954545 |
N | 194 | S194L | tCa | tTa | 62 | 62 | B.1.444 | 0.984127 |
N | 194 | S194L | tCa | tTa | 61 | 61 | B.1.36.23 | 1 |
N | 194 | S194L | tCa | tTa | 60 | 60 | B.1.188 | 1 |
N | 194 | S194L | tCa | tTa | 59 | 59 | B.1.1.334 | 0.967213 |
N | 194 | S194L | tCa | tTa | 58 | 58 | B.1.36.20 | 0.983051 |
N | 194 | S194L | tCa | tTa | 55 | 55 | B.1.199 | 0.227273 |
N | 194 | S194L | tCa | tTa | 49 | 49 | B.1.169 | 0.731343 |
N | 194 | S194L | tCa | tTa | 48 | 48 | AY.25 | 0.000289 |
N | 194 | S194L | tCa | tTa | 48 | 48 | AY.47 | 0.001493 |
N | 194 | S194L | tCa | tTa | 48 | 48 | B.1.242 | 0.90566 |
N | 194 | S194L | tCa | tTa | 47 | 47 | B.1.36.34 | 1 |
N | 194 | S194L | tCa | tTa | 46 | 46 | B.1.1.466 | 0.4 |
N | 194 | S194L | tCa | tTa | 45 | 45 | B.1.1.284 | 0.004833 |
N | 194 | S194L | tCa | tTa | 43 | 43 | B.1.189 | 0.184549 |
N | 194 | S194L | tCa | tTa | 41 | 41 | B.1.578 | 0.732143 |
N | 194 | S194L | tCa | tTa | 40 | 40 | B.1.240.1 | 1 |
N | 194 | S194L | tCa | tTa | 40 | 40 | B.1.243.1 | 0.888889 |
N | 194 | S194S | tcA | tcT | 22 | 37 | AY.4 | 0.000034 |
N | 194 | S194S | tcA | tcG | 15 | 37 | AY.4 | 0.000023 |
N | 194 | S194L | tCa | tTa | 37 | 37 | B.1.210 | 0.078891 |
N | 194 | S194L | tCa | tTa | 37 | 37 | B.1.462 | 0.268116 |
N | 194 | S194L | tCa | tTa | 37 | 37 | B.1.470 | 0.051966 |
N | 194 | S194L | tCa | tTa | 37 | 37 | B.1.595 | 0.009656 |
N | 194 | S194L | tCa | tTa | 36 | 36 | AY.20 | 0.001399 |
N | 194 | S194S | tcA | tcG | 36 | 36 | B.1.1.318 | 0.010863 |
N | 194 | S194L | tCa | tTa | 35 | 35 | B.1.1.434 | 0.012199 |
N | 194 | S194S | tcA | tcG | 30 | 34 | AY.103 | 0.000186 |
N | 194 | S194S | tcA | tcT | 3 | 34 | AY.103 | 0.000019 |
N | 194 | S194S | tcA | tcC | 1 | 34 | AY.103 | 0.000006 |
N | 194 | S194L | tCa | tTa | 34 | 34 | AY.39 | 0.00084 |
N | 194 | S194L | tCa | tTa | 33 | 33 | B.1.113 | 0.515625 |
N | 194 | S194L | tCa | tTa | 32 | 32 | B.1.118 | 0.214765 |
N | 194 | S194L | tCa | tTa | 32 | 32 | B.1.247 | 0.477612 |
N | 194 | S194L | tCa | tTa | 32 | 32 | B.1.420 | 0.333333 |
N | 194 | S194S | tcA | tcC | 29 | 31 | AY.26 | 0.000821 |
N | 194 | S194S | tcA | tcG | 1 | 31 | AY.26 | 0.000028 |
N | 194 | S194S | tcA | tcT | 1 | 31 | AY.26 | 0.000028 |
N | 194 | S194P | Tca | Cca | 31 | 31 | AY.4 | 0.000048 |
N | 194 | S194A | Tca | Gca | 31 | 31 | B.1 | 0.000284 |
N | 194 | S194L | tCa | tTa | 31 | 31 | B.1.177 | 0.000408 |
N | 194 | S194L | tCa | tTa | 31 | 31 | B.1.231 | 1 |
N | 194 | S194L | tCa | tTa | 31 | 31 | B.1.240.2 | 0.939394 |
N | 194 | S194L | tCa | tTa | 30 | 30 | AY.9 | 0.002028 |
N | 194 | S194L | tCa | tTa | 28 | 28 | B.1.177.30 | 0.070352 |
N | 194 | S194S | tcA | tcG | 27 | 27 | P.2 | 0.005039 |
N | 194 | S194L | tCa | tTa | 26 | 26 | B.1.617.1 | 0.003353 |
N | 194 | S194L | tCa | tTa | 26 | 26 | P.1 | 0.00041 |
N | 194 | S194T | Tca | Aca | 25 | 25 | All | 0.000005 |
N | 194 | S194L | tCa | tTa | 25 | 25 | B.1.407 | 0.892857 |
N | 194 | S194X | tCa | tAa | 21 | 24 | All | 0.000004 |
N | 194 | S194X | tCa | tGa | 2 | 24 | All | 0 |
N | 194 | S194X | tCA | tAG | 1 | 24 | All | 0 |
N | 194 | S194L | tCa | tTa | 24 | 24 | B.1.417 | 0.685714 |
N | 194 | S194L | tCa | tTa | 23 | 23 | B.1.258 | 0.001531 |
N | 194 | S194S | tcA | tcG | 23 | 23 | B.1.258.3 | 0.038526 |
N | 194 | S194L | tCa | tTa | 23 | 23 | B.1.525 | 0.002603 |
N | 194 | S194L | tCa | tTa | 23 | 23 | B.1.596.1 | 0.214953 |
N | 194 | S194P | Tca | Cca | 22 | 22 | AY.25 | 0.000132 |
N | 194 | S194S | tcA | tcG | 21 | 22 | P.1.14 | 0.001004 |
N | 194 | S194S | tcA | tcT | 1 | 22 | P.1.14 | 0.000048 |
N | 194 | S194L | tCa | tTa | 21 | 21 | B.1.1.39 | 0.010703 |
N | 194 | S194L | tCa | tTa | 21 | 21 | B.1.590 | 0.095455 |
N | 194 | S194L | tCa | tTa | 20 | 20 | AY.100 | 0.00092 |
N | 194 | S194L | tCa | tTa | 20 | 20 | AY.75.1 | 0.003606 |
N | 194 | S194L | tCa | tTa | 20 | 20 | B.1.1.526 | 0.070922 |
N | 194 | S194S | tcA | tcG | 11 | 19 | AY.44 | 0.000067 |
N | 194 | S194S | tcA | tcT | 8 | 19 | AY.44 | 0.000049 |
N | 194 | S194L | tCa | tTa | 18 | 18 | B.1.580 | 0.073171 |
N | 194 | S194L | tCa | tTa | 17 | 17 | AY.26 | 0.000481 |
N | 194 | S194S | tcA | tcT | 13 | 17 | AY.43 | 0.000058 |
N | 194 | S194S | tcA | tcG | 3 | 17 | AY.43 | 0.000013 |
N | 194 | S194S | tcA | tcC | 1 | 17 | AY.43 | 0.000004 |
N | 194 | S194L | tCa | tTa | 17 | 17 | B.1.1.1 | 0.005554 |
N | 194 | S194L | tCa | tTa | 17 | 17 | B.1.158 | 0.404762 |
N | 194 | S194L | tCa | tTa | 17 | 17 | B.1.184 | 1 |
N | 194 | S194P | Tca | Cca | 17 | 17 | B.1.258 | 0.001131 |
N | 194 | S194L | tCa | tTa | 17 | 17 | B.6.6 | 0.015111 |
N | 194 | S194del | TCA | --- | 16 | 16 | AY.25 | 0.000096 |
N | 194 | S194L | tCa | tTa | 16 | 16 | B.1.1.50 | 0.010862 |
N | 194 | S194L | tCa | tTa | 16 | 16 | B.1.526 | 0.000376 |
N | 194 | S194L | tCa | tTa | 15 | 15 | AY.6 | 0.000617 |
N | 194 | S194L | tCa | tTa | 15 | 15 | B.1.177.73 | 0.008494 |
N | 194 | S194L | tCa | tTa | 15 | 15 | B.1.362.1 | 1 |
N | 194 | S194S | tcA | tcT | 9 | 15 | B.1.617.2 | 0.000034 |
N | 194 | S194S | tcA | tcG | 6 | 15 | B.1.617.2 | 0.000023 |
N | 194 | S194L | tCa | tTa | 15 | 15 | B.1.627 | 0.030303 |
N | 194 | S194del1 | tCa | t-a | 13 | 14 | All | 0.000002 |
N | 194 | S194del1 | tcA | tc- | 1 | 14 | All | 0 |
N | 194 | S194L | tCa | tTa | 14 | 14 | AY.102 | 0.000371 |
N | 194 | S194L | tCa | tTa | 14 | 14 | B.1.311 | 0.003844 |
N | 194 | S194P | Tca | Cca | 14 | 14 | B.1.349 | 0.010007 |
N | 194 | S194S | tcA | tcG | 13 | 13 | AY.114 | 0.003004 |
N | 194 | S194L | tCa | tTa | 13 | 13 | AY.120.1 | 0.004173 |
N | 194 | S194L | tCa | tTa | 13 | 13 | AY.5 | 0.000268 |
N | 194 | S194del | TCA | --- | 13 | 13 | B.1 | 0.000119 |
N | 194 | S194L | tCa | tTa | 13 | 13 | B.1.1.27 | 0.073446 |
N | 194 | S194L | tCa | tTa | 13 | 13 | B.1.1.519 | 0.000516 |
N | 194 | S194L | tCa | tTa | 13 | 13 | B.1.222 | 0.021997 |
N | 194 | S194L | tCa | tTa | 13 | 13 | B.6 | 0.011829 |
N | 194 | S194L | tCa | tTa | 12 | 12 | AY.29.1 | 0.002646 |
N | 194 | S194del | TCA | --- | 12 | 12 | AY.6 | 0.000494 |
N | 194 | S194L | tCa | tTa | 12 | 12 | AY.65 | 0.006397 |
N | 194 | S194S | tcA | tcT | 8 | 12 | B.1 | 0.000073 |
N | 194 | S194S | tcA | tcG | 2 | 12 | B.1 | 0.000018 |
N | 194 | S194S | tcA | tcC | 2 | 12 | B.1 | 0.000018 |
N | 194 | S194L | tCa | tTa | 12 | 12 | B.1.620 | 0.011353 |
N | 194 | S194L | tCa | tTa | 12 | 12 | P.1.12 | 0.005808 |
N | 194 | S194L | tCa | tTa | 11 | 11 | A | 0.004257 |
N | 194 | S194del | TCA | --- | 11 | 11 | AY.4 | 0.000017 |
N | 194 | S194L | tCa | tTa | 11 | 11 | B.1.160.16 | 0.010223 |
N | 194 | S194L | tCa | tTa | 11 | 11 | B.1.375 | 0.009016 |
N | 194 | S194P | Tca | Cca | 11 | 11 | B.1.637 | 0.000804 |
N | 194 | S194L | tCa | tTa | 10 | 10 | AY.113 | 0.001424 |
N | 194 | S194L | tCa | tTa | 10 | 10 | B.1.157 | 0.029851 |
N | 194 | S194L | tCa | tTa | 10 | 10 | B.1.545 | 0.144928 |
N | 194 | S194L | tCa | tTa | 10 | 10 | B.1.582 | 0.004907 |
N | 194 | S194A | Tca | Gca | 9 | 9 | AY.3 | 0.00009 |
N | 194 | S194L | tCa | tTa | 9 | 9 | AY.3.1 | 0.000767 |
N | 194 | S194L | tCa | tTa | 9 | 9 | AY.98 | 0.000711 |
N | 194 | S194T | Tca | Aca | 9 | 9 | B.1.1.7 | 0.000008 |
N | 194 | S194del | TCA | --- | 9 | 9 | B.1.1.7 | 0.000008 |
N | 194 | S194L | tCa | tTa | 9 | 9 | B.1.351 | 0.000268 |
N | 194 | S194L | tCa | tTa | 9 | 9 | B.1.576 | 0.00816 |
N | 194 | S194S | tcA | tcT | 9 | 9 | B.1.612 | 0.023873 |
N | 194 | S194L | tCa | tTa | 9 | 9 | B.1.618 | 0.03629 |
N | 194 | S194L | tCa | tTa | 8 | 8 | AY.117 | 0.000676 |
N | 194 | S194L | tCa | tTa | 8 | 8 | AY.16.1 | 0.003759 |
N | 194 | S194S | tcA | tcC | 6 | 8 | AY.20 | 0.000233 |
N | 194 | S194S | tcA | tcG | 1 | 8 | AY.20 | 0.000039 |
N | 194 | S194S | tcA | tcT | 1 | 8 | AY.20 | 0.000039 |
N | 194 | S194L | tCa | tTa | 8 | 8 | AY.23.1 | 0.003339 |
N | 194 | S194S | tcA | tcT | 4 | 8 | AY.25 | 0.000024 |
N | 194 | S194S | tcA | tcG | 4 | 8 | AY.25 | 0.000024 |
N | 194 | S194L | tCa | tTa | 8 | 8 | AY.35 | 0.001864 |
N | 194 | S194S | tcA | tcT | 8 | 8 | AY.47 | 0.000249 |
N | 194 | S194L | tCa | tTa | 8 | 8 | AY.75 | 0.000448 |
N | 194 | S194L | tCa | tTa | 8 | 8 | B.1.124 | 0.0625 |
N | 194 | S194P | Tca | Cca | 8 | 8 | B.1.2 | 0.00007 |
N | 194 | S194L | tCa | tTa | 8 | 8 | B.1.503 | 0.0199 |
N | 194 | S194L | tCa | tTa | 8 | 8 | B.1.621 | 0.000708 |
N | 194 | S194L | tCa | tTa | 8 | 8 | B.1.9.5 | 0.045455 |
N | 194 | S194L | tCa | tTa | 8 | 8 | P.1.1 | 0.002541 |
N | 194 | S194L | tCa | tTa | 7 | 7 | AY.119 | 0.000247 |
N | 194 | S194L | tCa | tTa | 6 | 7 | AY.23 | 0.000418 |
N | 194 | S194L | tCA | tTG | 1 | 7 | AY.23 | 0.00007 |
N | 194 | S194L | tCa | tTa | 7 | 7 | AY.53 | 0.002013 |
N | 194 | S194L | tCa | tTa | 7 | 7 | B.1.258.17 | 0.000728 |
N | 194 | S194L | tCa | tTa | 7 | 7 | B.1.564 | 0.002981 |
N | 194 | S194S | tcA | tcT | 7 | 7 | Q.8 | 0.001154 |
N | 194 | S194P | Tca | Cca | 6 | 6 | AY.103 | 0.000037 |
N | 194 | S194S | tcA | tcT | 6 | 6 | AY.30 | 0.002374 |
N | 194 | S194L | tCa | tTa | 6 | 6 | AY.46.4 | 0.000987 |
N | 194 | S194L | tCa | tTa | 6 | 6 | AY.9.1 | 0.000502 |
N | 194 | S194T | Tca | Aca | 6 | 6 | B.1.1 | 0.000109 |
N | 194 | S194L | tCa | tTa | 6 | 6 | B.1.1.317 | 0.00247 |
N | 194 | S194A | Tca | Gca | 6 | 6 | B.1.1.7 | 0.000005 |
N | 194 | S194L | tCa | tTa | 6 | 6 | B.1.160.28 | 0.017544 |
N | 194 | S194P | Tca | Cca | 6 | 6 | B.1.177 | 0.000079 |
N | 194 | S194L | tCa | tTa | 6 | 6 | B.1.177.43 | 0.008863 |
N | 194 | S194L | tCa | tTa | 6 | 6 | B.1.349 | 0.004289 |
N | 194 | S194L | tCa | tTa | 6 | 6 | B.1.367 | 0.004754 |
N | 194 | S194L | tCa | tTa | 6 | 6 | B.1.395 | 0.042254 |
N | 194 | S194P | Tca | Cca | 6 | 6 | B.1.416 | 0.007614 |
N | 194 | S194L | tCa | tTa | 6 | 6 | B.1.510 | 0.157895 |
N | 194 | S194L | tCa | tTa | 6 | 6 | B.1.527 | 0.022222 |
N | 194 | S194L | tCa | tTa | 6 | 6 | B.1.8 | 0.011834 |
N | 194 | S194L | tCa | tTa | 6 | 6 | B.3 | 0.004983 |
N | 194 | S194L | tCa | tTa | 6 | 6 | C.37 | 0.000696 |
N | 194 | S194S | tcA | tcG | 6 | 6 | D.2 | 0.00045 |
N | 194 | S194T | Tca | Aca | 5 | 5 | A.1 | 0.001409 |
N | 194 | S194L | tCa | tTa | 5 | 5 | AY.1 | 0.001979 |
N | 194 | S194L | tCa | tTa | 5 | 5 | AY.36 | 0.000741 |
N | 194 | S194L | tCa | tTa | 5 | 5 | AY.54 | 0.000477 |
N | 194 | S194L | tCa | tTa | 5 | 5 | AY.9.2 | 0.000184 |
N | 194 | S194P | Tca | Cca | 5 | 5 | B.1 | 0.000046 |
N | 194 | S194X | tCa | tAa | 4 | 5 | B.1 | 0.000037 |
N | 194 | S194X | tCa | tGa | 1 | 5 | B.1 | 0.000009 |
N | 194 | S194L | tCa | tTa | 5 | 5 | B.1.1.294 | 0.006329 |
N | 194 | S194L | tCa | tTa | 5 | 5 | B.1.1.70 | 0.001705 |
N | 194 | S194L | tCa | tTa | 5 | 5 | B.1.104 | 0.01845 |
N | 194 | S194S | tcA | tcT | 3 | 5 | B.1.2 | 0.000026 |
N | 194 | S194S | tcA | tcC | 1 | 5 | B.1.2 | 0.000009 |
N | 194 | S194S | tcA | tcG | 1 | 5 | B.1.2 | 0.000009 |
N | 194 | S194L | tCa | tTa | 5 | 5 | B.1.206 | 0.004078 |
N | 194 | S194L | tCa | tTa | 5 | 5 | B.1.214 | 0.018315 |
N | 194 | S194L | tCa | tTa | 5 | 5 | B.1.281 | 0.108696 |
N | 194 | S194L | tCa | tTa | 5 | 5 | B.1.465 | 0.019011 |
N | 194 | S194L | tCa | tTa | 5 | 5 | B.1.577 | 0.003436 |
N | 194 | S194L | tCa | tTa | 5 | 5 | B.1.581 | 0.04717 |
N | 194 | S194A | Tca | Gca | 5 | 5 | B.1.596 | 0.000436 |
N | 194 | S194L | tCa | tTa | 5 | 5 | B.1.600 | 0.02924 |
N | 194 | S194P | Tca | Cca | 5 | 5 | B.1.617.2 | 0.000019 |
N | 194 | S194L | tCa | tTa | 5 | 5 | B.1.637 | 0.000365 |
N | 194 | S194L | tCa | tTa | 5 | 5 | C.1 | 0.011962 |
N | 194 | S194L | tCa | tTa | 5 | 5 | C.18 | 0.012953 |
N | 194 | S194L | tCa | tTa | 5 | 5 | Q.8 | 0.000825 |
N | 194 | S194L | tCa | tTa | 4 | 4 | AY.120 | 0.000149 |
N | 194 | S194L | tCa | tTa | 4 | 4 | AY.13 | 0.000644 |
N | 194 | S194S | tcA | tcG | 2 | 4 | AY.3 | 0.00002 |
N | 194 | S194S | tcA | tcT | 2 | 4 | AY.3 | 0.00002 |
N | 194 | S194L | tCa | tTa | 4 | 4 | AY.42 | 0.000161 |
N | 194 | S194P | Tca | Cca | 4 | 4 | AY.43 | 0.000018 |
N | 194 | S194S | tcA | tcG | 3 | 4 | AY.5 | 0.000062 |
N | 194 | S194S | tcA | tcT | 1 | 4 | AY.5 | 0.000021 |
N | 194 | S194L | tCa | tTa | 4 | 4 | AY.61 | 0.000419 |
N | 194 | S194L | tCa | tTa | 4 | 4 | AY.70 | 0.000834 |
N | 194 | S194S | tcA | tcG | 4 | 4 | B.1.1 | 0.000073 |
N | 194 | S194P | Tca | Cca | 4 | 4 | B.1.1 | 0.000073 |
N | 194 | S194L | tCa | tTa | 4 | 4 | B.1.1.335 | 0.051948 |
N | 194 | S194L | tCa | tTa | 4 | 4 | B.1.1.63 | 0.001543 |
N | 194 | S194L | tCa | tTa | 4 | 4 | B.1.119 | 0.042105 |
N | 194 | S194L | tCa | tTa | 4 | 4 | B.1.139 | 0.002933 |
N | 194 | S194L | tCa | tTa | 4 | 4 | B.1.149 | 0.013699 |
N | 194 | S194L | tCa | tTa | 4 | 4 | B.1.179 | 0.015038 |
N | 194 | S194del1 | tCa | t-a | 4 | 4 | B.1.247 | 0.059701 |
N | 194 | S194L | tCa | tTa | 4 | 4 | B.1.284 | 0.052632 |
N | 194 | S194L | tCa | tTa | 4 | 4 | B.1.298 | 0.008457 |
N | 194 | S194L | tCa | tTa | 4 | 4 | B.1.319 | 0.012195 |
N | 194 | S194L | tCa | tTa | 4 | 4 | B.1.323 | 0.083333 |
N | 194 | S194L | tCa | tTa | 4 | 4 | B.1.324 | 0.006421 |
N | 194 | S194L | tCa | tTa | 4 | 4 | B.1.326 | 0.030303 |
N | 194 | S194L | tCa | tTa | 4 | 4 | B.1.369 | 0.001141 |
N | 194 | S194L | tCa | tTa | 4 | 4 | B.1.427 | 0.000202 |
N | 194 | S194L | tCa | tTa | 4 | 4 | B.1.468 | 0.022857 |
N | 194 | S194L | tCa | tTa | 4 | 4 | B.1.500 | 0.210526 |
N | 194 | S194L | tCa | tTa | 4 | 4 | B.1.517 | 0.001708 |
N | 194 | S194L | tCa | tTa | 4 | 4 | B.1.537 | 0.08 |
N | 194 | S194L | tCa | tTa | 4 | 4 | B.1.560 | 0.018519 |
N | 194 | S194L | tCa | tTa | 4 | 4 | B.1.76 | 0.045455 |
N | 194 | S194L | tCa | tTa | 4 | 4 | B.1.78 | 0.034188 |
N | 194 | S194S | tcA | tcT | 4 | 4 | B.6.6 | 0.003556 |
N | 194 | S194P | Tca | Cca | 4 | 4 | P.1 | 0.000063 |
N | 194 | S194S | tcA | tcG | 4 | 4 | P.1.12 | 0.001936 |
N | 194 | S194L | tCa | tTa | 4 | 4 | P.1.14 | 0.000191 |
N | 194 | S194L | tCa | tTa | 3 | 3 | AD.2 | 0.000657 |
N | 194 | S194F | tCA | tTT | 3 | 3 | All | 0.000001 |
N | 194 | S194V | TCa | GTa | 3 | 3 | All | 0.000001 |
N | 194 | S194S | tcA | tcT | 3 | 3 | AY.113 | 0.000427 |
N | 194 | S194S | tcA | tcT | 3 | 3 | AY.119 | 0.000106 |
N | 194 | S194L | tCa | tTa | 3 | 3 | AY.28 | 0.005671 |
N | 194 | S194P | Tca | Cca | 3 | 3 | AY.3 | 0.00003 |
N | 194 | S194S | tcA | tcT | 3 | 3 | AY.39 | 0.000074 |
N | 194 | S194L | tCa | tTa | 3 | 3 | AY.39.1 | 0.000119 |
N | 194 | S194A | Tca | Gca | 3 | 3 | AY.4 | 0.000005 |
N | 194 | S194L | tCa | tTa | 3 | 3 | AY.4.2 | 0.000065 |
N | 194 | S194P | Tca | Cca | 3 | 3 | AY.44 | 0.000018 |
N | 194 | S194L | tCa | tTa | 3 | 3 | AY.52 | 0.002443 |
N | 194 | S194L | tCa | tTa | 3 | 3 | AY.69 | 0.00056 |
N | 194 | S194L | tCa | tTa | 3 | 3 | AY.96 | 0.006224 |
N | 194 | S194S | tcA | tcT | 3 | 3 | AY.98 | 0.000237 |
N | 194 | S194L | tCa | tTa | 3 | 3 | B.1.1.205 | 0.011152 |
N | 194 | S194S | tcA | tcG | 3 | 3 | B.1.1.214 | 0.000166 |
N | 194 | S194L | tCa | tTa | 3 | 3 | B.1.1.241 | 0.006211 |
N | 194 | S194L | tCa | tTa | 3 | 3 | B.1.1.33 | 0.001263 |
N | 194 | S194L | tCa | tTa | 3 | 3 | B.1.1.372 | 0.002066 |
N | 194 | S194L | tCa | tTa | 3 | 3 | B.1.1.377 | 0.004144 |
N | 194 | S194S | tcA | tcG | 3 | 3 | B.1.1.515 | 0.06 |
N | 194 | S194L | tCa | tTa | 3 | 3 | B.1.128 | 0.001906 |
N | 194 | S194L | tCa | tTa | 3 | 3 | B.1.143 | 0.06383 |
N | 194 | S194S | tcA | tcG | 2 | 3 | B.1.160 | 0.000062 |
N | 194 | S194S | tcA | tcT | 1 | 3 | B.1.160 | 0.000031 |
N | 194 | S194L | tCa | tTa | 3 | 3 | B.1.160.32 | 0.012876 |
N | 194 | S194L | tCa | tTa | 3 | 3 | B.1.167 | 0.023438 |
N | 194 | S194del | TCA | --- | 3 | 3 | B.1.177 | 0.00004 |
N | 194 | S194L | tCa | tTa | 3 | 3 | B.1.177.70 | 0.017751 |
N | 194 | S194L | tCa | tTa | 3 | 3 | B.1.192 | 0.027778 |
N | 194 | S194L | tCa | tTa | 3 | 3 | B.1.214.2 | 0.001799 |
N | 194 | S194L | tCa | tTa | 3 | 3 | B.1.223 | 0.008333 |
N | 194 | S194L | tCa | tTa | 3 | 3 | B.1.289 | 0.007979 |
N | 194 | S194P | Tca | Cca | 3 | 3 | B.1.309 | 0.142857 |
N | 194 | S194L | tCa | tTa | 3 | 3 | B.1.332 | 0.01049 |
N | 194 | S194S | tcA | tcG | 3 | 3 | B.1.371 | 0.003367 |
N | 194 | S194L | tCa | tTa | 3 | 3 | B.1.382 | 0.026786 |
N | 194 | S194L | tCa | tTa | 3 | 3 | B.1.413 | 0.012766 |
N | 194 | S194A | Tca | Gca | 3 | 3 | B.1.416 | 0.003807 |
N | 194 | S194L | tCa | tTa | 3 | 3 | B.1.425 | 0.008982 |
N | 194 | S194L | tCa | tTa | 3 | 3 | B.1.438.1 | 0.000322 |
N | 194 | S194L | tCa | tTa | 3 | 3 | B.1.453 | 0.009709 |
N | 194 | S194L | tCa | tTa | 3 | 3 | B.1.460 | 0.053571 |
N | 194 | S194L | tCa | tTa | 3 | 3 | B.1.474 | 0.005703 |
N | 194 | S194L | tCa | tTa | 3 | 3 | B.1.499 | 0.003151 |
N | 194 | S194L | tCa | tTa | 3 | 3 | B.1.538 | 0.024194 |
N | 194 | S194L | tCa | tTa | 3 | 3 | B.1.567 | 0.01 |
N | 194 | S194L | tCa | tTa | 3 | 3 | B.1.623 | 0.001609 |
N | 194 | S194L | tCa | tTa | 3 | 3 | B.1.634 | 0.010274 |
N | 194 | S194L | tCa | tTa | 3 | 3 | B.4.1 | 0.056604 |
N | 194 | S194L | tCa | tTa | 3 | 3 | B.40 | 0.001093 |
N | 194 | S194L | tCa | tTa | 3 | 3 | D.2 | 0.000225 |
N | 194 | S194del | TCA | --- | 3 | 3 | P.1 | 0.000047 |
N | 194 | S194P | Tca | Cca | 2 | 2 | 0.111111 | |
N | 194 | S194L | tCa | tTa | 2 | 2 | A.1 | 0.000564 |
N | 194 | S194L | tCa | tTa | 2 | 2 | A.2 | 0.001324 |
N | 194 | S194L | tCa | tTa | 2 | 2 | A.23.1 | 0.001408 |
N | 194 | S194L | tCa | tTa | 2 | 2 | AE.1 | 0.022727 |
N | 194 | S194del2 | TCa | --a | 1 | 2 | All | 0 |
N | 194 | S194del2 | tCA | t-- | 1 | 2 | All | 0 |
N | 194 | S194L | tCa | tTa | 2 | 2 | AY.10 | 0.00106 |
N | 194 | S194L | tCa | tTa | 2 | 2 | AY.106 | 0.00067 |
N | 194 | S194S | tcA | tcG | 2 | 2 | AY.106 | 0.00067 |
N | 194 | S194L | tCa | tTa | 2 | 2 | AY.116.1 | 0.000623 |
N | 194 | S194S | tcA | tcT | 2 | 2 | AY.118 | 0.000125 |
N | 194 | S194L | tCa | tTa | 2 | 2 | AY.118 | 0.000125 |
N | 194 | S194P | Tca | Cca | 2 | 2 | AY.12 | 0.000632 |
N | 194 | S194L | tCa | tTa | 2 | 2 | AY.14 | 0.000176 |
N | 194 | S194L | tCa | tTa | 2 | 2 | AY.16 | 0.000759 |
N | 194 | S194S | tcA | tcG | 1 | 2 | AY.23 | 0.00007 |
N | 194 | S194S | tcA | tcT | 1 | 2 | AY.23 | 0.00007 |
N | 194 | S194L | tCa | tTa | 2 | 2 | AY.24 | 0.000862 |
N | 194 | S194S | tcA | tcT | 2 | 2 | AY.3.1 | 0.000171 |
N | 194 | S194L | tCa | tTa | 2 | 2 | AY.30 | 0.000791 |
N | 194 | S194L | tCa | tTa | 2 | 2 | AY.34 | 0.000194 |
N | 194 | S194P | Tca | Cca | 2 | 2 | AY.39 | 0.000049 |
N | 194 | S194L | tCa | tTa | 2 | 2 | AY.4.5 | 0.000215 |
N | 194 | S194del | TCA | --- | 2 | 2 | AY.40 | 0.001929 |
N | 194 | S194P | Tca | Cca | 2 | 2 | AY.42 | 0.00008 |
N | 194 | S194X | tCa | tAa | 2 | 2 | AY.43 | 0.000009 |
N | 194 | S194L | tCa | tTa | 2 | 2 | AY.45 | 0.000243 |
N | 194 | S194L | tCa | tTa | 2 | 2 | AY.46 | 0.000208 |
N | 194 | S194P | Tca | Cca | 2 | 2 | AY.47 | 0.000062 |
N | 194 | S194L | tCa | tTa | 2 | 2 | AY.5.3 | 0.000675 |
N | 194 | S194del | TCA | --- | 2 | 2 | AY.50 | 0.001599 |
N | 194 | S194P | Tca | Cca | 1 | 2 | AY.79 | 0.001211 |
N | 194 | S194P | TcA | CcG | 1 | 2 | AY.79 | 0.001211 |
N | 194 | S194del | TCA | --- | 2 | 2 | AY.9.2 | 0.000073 |
N | 194 | S194L | tCa | tTa | 2 | 2 | AY.98.1 | 0.000097 |
N | 194 | S194L | tCa | tTa | 2 | 2 | AY.99 | 0.002099 |
N | 194 | S194F | tCA | tTT | 2 | 2 | B.1 | 0.000018 |
N | 194 | S194del1 | tCa | t-a | 2 | 2 | B.1.1 | 0.000036 |
N | 194 | S194del | TCA | --- | 2 | 2 | B.1.1 | 0.000036 |
N | 194 | S194L | tCa | tTa | 2 | 2 | B.1.1.10 | 0.00223 |
N | 194 | S194L | tCa | tTa | 2 | 2 | B.1.1.161 | 0.007067 |
N | 194 | S194L | tCa | tTa | 2 | 2 | B.1.1.214 | 0.000111 |
N | 194 | S194L | tCa | tTa | 2 | 2 | B.1.1.273 | 0.013514 |
N | 194 | S194L | tCa | tTa | 2 | 2 | B.1.1.306 | 0.000877 |
N | 194 | S194L | tCa | tTa | 2 | 2 | B.1.1.37 | 0.000386 |
N | 194 | S194L | tCa | tTa | 2 | 2 | B.1.1.409 | 0.005666 |
N | 194 | S194X | tCa | tAa | 2 | 2 | B.1.1.7 | 0.000002 |
N | 194 | S194L | tCa | tTa | 2 | 2 | B.1.110.3 | 0.001437 |
N | 194 | S194L | tCa | tTa | 2 | 2 | B.1.115 | 0.043478 |
N | 194 | S194L | tCa | tTa | 2 | 2 | B.1.146 | 0.008475 |
N | 194 | S194L | tCa | tTa | 2 | 2 | B.1.164 | 0.029851 |
N | 194 | S194L | tCa | tTa | 2 | 2 | B.1.177.44 | 0.001038 |
N | 194 | S194L | tCa | tTa | 2 | 2 | B.1.177.6 | 0.001953 |
N | 194 | S194del | TCA | --- | 2 | 2 | B.1.2 | 0.000018 |
N | 194 | S194X | tCa | tAa | 1 | 2 | B.1.2 | 0.000009 |
N | 194 | S194X | tCa | tGa | 1 | 2 | B.1.2 | 0.000009 |
N | 194 | S194del1 | tCa | t-a | 2 | 2 | B.1.214 | 0.007326 |
N | 194 | S194del | TCA | --- | 2 | 2 | B.1.265 | 0.002541 |
N | 194 | S194L | tCa | tTa | 2 | 2 | B.1.276 | 0.033898 |
N | 194 | S194L | tCa | tTa | 2 | 2 | B.1.279 | 0.001027 |
N | 194 | S194L | tCa | tTa | 2 | 2 | B.1.320 | 0.002491 |
N | 194 | S194P | Tca | Cca | 2 | 2 | B.1.329 | 0.001215 |
N | 194 | S194L | tCa | tTa | 2 | 2 | B.1.350 | 0.005865 |
N | 194 | S194del | TCA | --- | 2 | 2 | B.1.351 | 0.000059 |
N | 194 | S194L | tCa | tTa | 2 | 2 | B.1.361 | 0.002577 |
N | 194 | S194L | tCa | tTa | 2 | 2 | B.1.371 | 0.002245 |
N | 194 | S194L | tCa | tTa | 2 | 2 | B.1.391 | 0.002255 |
N | 194 | S194L | tCa | tTa | 2 | 2 | B.1.416 | 0.002538 |
N | 194 | S194S | tcA | tcG | 2 | 2 | B.1.427 | 0.000101 |
N | 194 | S194L | tCa | tTa | 2 | 2 | B.1.432 | 0.022472 |
N | 194 | S194L | tCa | tTa | 2 | 2 | B.1.459 | 0.008163 |
N | 194 | S194L | tCa | tTa | 2 | 2 | B.1.463 | 0.016129 |
N | 194 | S194L | tCa | tTa | 2 | 2 | B.1.466.2 | 0.000782 |
N | 194 | S194L | tCa | tTa | 2 | 2 | B.1.505 | 0.008772 |
N | 194 | S194L | tCa | tTa | 2 | 2 | B.1.509 | 0.001732 |
N | 194 | S194L | tCa | tTa | 2 | 2 | B.1.521 | 0.00995 |
N | 194 | S194X | tCa | tAa | 2 | 2 | B.1.525 | 0.000226 |
N | 194 | S194X | tCa | tAa | 2 | 2 | B.1.533 | 0.019231 |
N | 194 | S194L | tCa | tTa | 2 | 2 | B.1.533 | 0.019231 |
N | 194 | S194L | tCa | tTa | 2 | 2 | B.1.555 | 0.044444 |
N | 194 | S194L | tCa | tTa | 2 | 2 | B.1.565 | 0.001621 |
N | 194 | S194L | tCa | tTa | 2 | 2 | B.1.566 | 0.038462 |
N | 194 | S194L | tCa | tTa | 2 | 2 | B.1.575 | 0.000607 |
N | 194 | S194L | tCa | tTa | 2 | 2 | B.1.588 | 0.00182 |
N | 194 | S194L | tCa | tTa | 2 | 2 | B.1.599 | 0.007299 |
N | 194 | S194L | tCa | tTa | 2 | 2 | B.1.612 | 0.005305 |
N | 194 | S194P | Tca | Cca | 2 | 2 | B.1.617.1 | 0.000258 |
N | 194 | S194L | tCa | tTa | 2 | 2 | B.1.81 | 0.042553 |
N | 194 | S194L | tCa | tTa | 2 | 2 | B.1.93 | 0.001867 |
N | 194 | S194L | tCa | tTa | 2 | 2 | B.12 | 0.012821 |
N | 194 | S194L | tCa | tTa | 2 | 2 | C.16 | 0.002121 |
N | 194 | S194L | tCa | tTa | 2 | 2 | C.26 | 0.014706 |
N | 194 | S194P | Tca | Cca | 2 | 2 | P.1.1 | 0.000635 |
N | 194 | S194L | tCa | tTa | 2 | 2 | P.1.16 | 0.000748 |
N | 194 | S194P | Tca | Cca | 2 | 2 | P.1.17 | 0.000324 |
N | 194 | S194L | tCa | tTa | 2 | 2 | P.7 | 0.008734 |
N | 194 | S194S | tcA | tcC | 2 | 2 | R.1 | 0.00018 |
N | 194 | S194L | tCa | tTa | 2 | 2 | R.2 | 0.028986 |
N | 194 | S194A | Tca | Gca | 1 | 1 | 0.055556 | |
N | 194 | S194T | Tca | Aca | 1 | 1 | A | 0.000387 |
N | 194 | S194A | Tca | Gca | 1 | 1 | A.1 | 0.000282 |
N | 194 | S194L | tCa | tTa | 1 | 1 | A.2.5 | 0.000499 |
N | 194 | S194L | tCa | tTa | 1 | 1 | A.3 | 0.002096 |
N | 194 | S194L | tCa | tTa | 1 | 1 | A.5 | 0.001923 |
N | 194 | S194L | tCa | tTa | 1 | 1 | AD.1 | 0.004115 |
N | 194 | S194K | TCa | AAa | 1 | 1 | All | 0 |
N | 194 | S194I | TCa | ATa | 1 | 1 | All | 0 |
N | 194 | S194L | tCa | tTa | 1 | 1 | AT.1 | 0.005128 |
N | 194 | S194L | tCa | tTa | 1 | 1 | AU.2 | 0.002421 |
N | 194 | S194S | tcA | tcG | 1 | 1 | AY.100 | 0.000046 |
N | 194 | S194S | tcA | tcC | 1 | 1 | AY.102 | 0.000027 |
N | 194 | S194P | Tca | Cca | 1 | 1 | AY.102 | 0.000027 |
N | 194 | S194T | Tca | Aca | 1 | 1 | AY.103 | 0.000006 |
N | 194 | S194X | tCa | tAa | 1 | 1 | AY.103 | 0.000006 |
N | 194 | S194A | Tca | Gca | 1 | 1 | AY.105 | 0.000643 |
N | 194 | S194L | tCa | tTa | 1 | 1 | AY.107 | 0.000466 |
N | 194 | S194del | TCA | --- | 1 | 1 | AY.108 | 0.001103 |
N | 194 | S194L | tCa | tTa | 1 | 1 | AY.109 | 0.00074 |
N | 194 | S194P | Tca | Cca | 1 | 1 | AY.110 | 0.000113 |
N | 194 | S194L | tCa | tTa | 1 | 1 | AY.115 | 0.005208 |
N | 194 | S194L | tCa | tTa | 1 | 1 | AY.116 | 0.000287 |
N | 194 | S194P | Tca | Cca | 1 | 1 | AY.120 | 0.000037 |
N | 194 | S194L | tCa | tTa | 1 | 1 | AY.120.2 | 0.001285 |
N | 194 | S194L | tCa | tTa | 1 | 1 | AY.121 | 0.000135 |
N | 194 | S194S | tcA | tcC | 1 | 1 | AY.121 | 0.000135 |
N | 194 | S194A | Tca | Gca | 1 | 1 | AY.20 | 0.000039 |
N | 194 | S194A | Tca | Gca | 1 | 1 | AY.23 | 0.00007 |
N | 194 | S194P | Tca | Cca | 1 | 1 | AY.26 | 0.000028 |
N | 194 | S194A | Tca | Gca | 1 | 1 | AY.29 | 0.000016 |
N | 194 | S194S | tcA | tcT | 1 | 1 | AY.29.1 | 0.000221 |
N | 194 | S194A | Tca | Gca | 1 | 1 | AY.30 | 0.000396 |
N | 194 | S194S | tcA | tcT | 1 | 1 | AY.33 | 0.000067 |
N | 194 | S194L | tCa | tTa | 1 | 1 | AY.33 | 0.000067 |
N | 194 | S194L | tCa | tTa | 1 | 1 | AY.34.1 | 0.00051 |
N | 194 | S194L | tCa | tTa | 1 | 1 | AY.38 | 0.000499 |
N | 194 | S194del1 | tCa | t-a | 1 | 1 | AY.39 | 0.000025 |
N | 194 | S194S | tcA | tcG | 1 | 1 | AY.4.2 | 0.000022 |
N | 194 | S194P | Tca | Cca | 1 | 1 | AY.4.2 | 0.000022 |
N | 194 | S194L | tCa | tTa | 1 | 1 | AY.4.2.1 | 0.000149 |
N | 194 | S194L | tCa | tTa | 1 | 1 | AY.4.3 | 0.000842 |
N | 194 | S194L | tCa | tTa | 1 | 1 | AY.4.4 | 0.000409 |
N | 194 | S194P | Tca | Cca | 1 | 1 | AY.40 | 0.000964 |
N | 194 | S194del | TCA | --- | 1 | 1 | AY.43 | 0.000004 |
N | 194 | S194A | Tca | Gca | 1 | 1 | AY.43 | 0.000004 |
N | 194 | S194X | tCa | tAa | 1 | 1 | AY.44 | 0.000006 |
N | 194 | S194A | Tca | Gca | 1 | 1 | AY.44 | 0.000006 |
N | 194 | S194del | TCA | --- | 1 | 1 | AY.46 | 0.000104 |
N | 194 | S194S | tcA | tcG | 1 | 1 | AY.46.1 | 0.001027 |
N | 194 | S194L | tCa | tTa | 1 | 1 | AY.46.2 | 0.000635 |
N | 194 | S194P | Tca | Cca | 1 | 1 | AY.46.2 | 0.000635 |
N | 194 | S194P | Tca | Cca | 1 | 1 | AY.46.3 | 0.000934 |
N | 194 | S194P | Tca | Cca | 1 | 1 | AY.46.4 | 0.000165 |
N | 194 | S194L | tCa | tTa | 1 | 1 | AY.46.5 | 0.000198 |
N | 194 | S194L | tCa | tTa | 1 | 1 | AY.48 | 0.000465 |
N | 194 | S194del | TCA | --- | 1 | 1 | AY.5 | 0.000021 |
N | 194 | S194X | tCa | tAa | 1 | 1 | AY.52 | 0.000814 |
N | 194 | S194S | tcA | tcC | 1 | 1 | AY.52 | 0.000814 |
N | 194 | S194S | tcA | tcC | 1 | 1 | AY.53 | 0.000288 |
N | 194 | S194L | tCa | tTa | 1 | 1 | AY.58 | 0.000907 |
N | 194 | S194S | tcA | tcC | 1 | 1 | AY.58 | 0.000907 |
N | 194 | S194S | tcA | tcG | 1 | 1 | AY.6 | 0.000041 |
N | 194 | S194P | Tca | Cca | 1 | 1 | AY.62 | 0.000436 |
N | 194 | S194L | tCa | tTa | 1 | 1 | AY.62 | 0.000436 |
N | 194 | S194L | tCa | tTa | 1 | 1 | AY.67 | 0.000464 |
N | 194 | S194K | TCa | AAa | 1 | 1 | AY.69 | 0.000187 |
N | 194 | S194L | tCa | tTa | 1 | 1 | AY.7 | 0.000196 |
N | 194 | S194S | tcA | tcT | 1 | 1 | AY.7 | 0.000196 |
N | 194 | S194L | tCa | tTa | 1 | 1 | AY.71 | 0.000475 |
N | 194 | S194L | tCa | tTa | 1 | 1 | AY.73 | 0.000665 |
N | 194 | S194del | TCA | --- | 1 | 1 | AY.75 | 0.000056 |
N | 194 | S194S | tcA | tcC | 1 | 1 | AY.75 | 0.000056 |
N | 194 | S194L | tCa | tTa | 1 | 1 | AY.77 | 0.001127 |
N | 194 | S194L | tCa | tTa | 1 | 1 | AY.78 | 0.001541 |
N | 194 | S194S | tcA | tcG | 1 | 1 | AY.79 | 0.001211 |
N | 194 | S194L | tCa | tTa | 1 | 1 | AY.82 | 0.001357 |
N | 194 | S194L | tCa | tTa | 1 | 1 | AY.84 | 0.000437 |
N | 194 | S194L | tCa | tTa | 1 | 1 | AY.85 | 0.000427 |
N | 194 | S194S | tcA | tcT | 1 | 1 | AY.85 | 0.000427 |
N | 194 | S194P | Tca | Cca | 1 | 1 | AY.9.1 | 0.000084 |
N | 194 | S194S | tcA | tcT | 1 | 1 | AY.9.2 | 0.000037 |
N | 194 | S194L | tCa | tTa | 1 | 1 | AY.91 | 0.00073 |
N | 194 | S194L | tCa | tTa | 1 | 1 | AY.92 | 0.000287 |
N | 194 | S194del1 | tcA | tc- | 1 | 1 | AY.96 | 0.002075 |
N | 194 | S194P | Tca | Cca | 1 | 1 | AY.98.1 | 0.000048 |
N | 194 | S194S | tcA | tcG | 1 | 1 | AY.99.2 | 0.000092 |
N | 194 | S194X | tCa | tAa | 1 | 1 | B | 0.000128 |
N | 194 | S194del | TCA | --- | 1 | 1 | B | 0.000128 |
N | 194 | S194S | tcA | tcG | 1 | 1 | B | 0.000128 |
N | 194 | S194V | TCa | GTa | 1 | 1 | B.1 | 0.000009 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.1.137 | 0.0125 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.1.141 | 0.002012 |
N | 194 | S194del | TCA | --- | 1 | 1 | B.1.1.153 | 0.001095 |
N | 194 | S194P | Tca | Cca | 1 | 1 | B.1.1.164 | 0.005155 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.1.170 | 0.001247 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.1.171 | 0.003676 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.1.176 | 0.000439 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.1.186 | 0.003436 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.1.189 | 0.001513 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.1.192 | 0.002309 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.1.200 | 0.007463 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.1.201 | 0.02439 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.1.210 | 0.005714 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.1.216 | 0.00089 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.1.220 | 0.001859 |
N | 194 | S194P | Tca | Cca | 1 | 1 | B.1.1.222 | 0.000204 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.1.255 | 0.00303 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.1.277 | 0.000759 |
N | 194 | S194P | Tca | Cca | 1 | 1 | B.1.1.302 | 0.002075 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.1.311 | 0.000358 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.1.316 | 0.000925 |
N | 194 | S194P | Tca | Cca | 1 | 1 | B.1.1.317 | 0.000412 |
N | 194 | S194P | Tca | Cca | 1 | 1 | B.1.1.33 | 0.000421 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.1.348 | 0.000796 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.1.353 | 0.020833 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.1.365 | 0.005587 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.1.369 | 0.000446 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.1.375 | 0.011905 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.1.378 | 0.007299 |
N | 194 | S194S | tcA | tcT | 1 | 1 | B.1.1.381 | 0.04 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.1.419 | 0.007407 |
N | 194 | S194P | Tca | Cca | 1 | 1 | B.1.1.432 | 0.001266 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.1.432 | 0.001266 |
N | 194 | S194S | tcA | tcG | 1 | 1 | B.1.1.432 | 0.001266 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.1.448 | 0.002033 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.1.46 | 0.004367 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.1.5 | 0.008333 |
N | 194 | S194S | tcA | tcG | 1 | 1 | B.1.1.517 | 0.006803 |
N | 194 | S194S | tcA | tcG | 1 | 1 | B.1.1.519 | 0.00004 |
N | 194 | S194P | Tca | Cca | 1 | 1 | B.1.1.70 | 0.000341 |
N | 194 | S194del | TCA | --- | 1 | 1 | B.1.1.70 | 0.000341 |
N | 194 | S194V | TCa | GTa | 1 | 1 | B.1.126 | 0.001276 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.13 | 0.002375 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.160.23 | 0.004831 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.160.30 | 0.002976 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.160.33 | 0.004425 |
N | 194 | S194P | Tca | Cca | 1 | 1 | B.1.162 | 0.005025 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.166 | 0.008475 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.177.10 | 0.000878 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.177.12 | 0.000152 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.177.16 | 0.000664 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.177.21 | 0.000076 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.177.23 | 0.003236 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.177.31 | 0.011494 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.177.33 | 0.001645 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.177.34 | 0.052632 |
N | 194 | S194S | tcA | tcC | 1 | 1 | B.1.177.35 | 0.000691 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.177.4 | 0.000211 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.177.48 | 0.003125 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.177.50 | 0.004695 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.177.56 | 0.000668 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.177.62 | 0.001192 |
N | 194 | S194X | tCA | tAG | 1 | 1 | B.1.177.63 | 0.002703 |
N | 194 | S194del | TCA | --- | 1 | 1 | B.1.177.68 | 0.015152 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.177.7 | 0.000165 |
N | 194 | S194S | tcA | tcC | 1 | 1 | B.1.177.76 | 0.002494 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.177.81 | 0.000189 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.181 | 0.019608 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.182 | 0.007246 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.190 | 0.01 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.195 | 0.005025 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.201 | 0.005682 |
N | 194 | S194T | Tca | Aca | 1 | 1 | B.1.214.2 | 0.0006 |
N | 194 | S194del | TCA | --- | 1 | 1 | B.1.221 | 0.000071 |
N | 194 | S194V | TCa | GTa | 1 | 1 | B.1.234 | 0.000132 |
N | 194 | S194del | TCA | --- | 1 | 1 | B.1.234 | 0.000132 |
N | 194 | S194A | Tca | Gca | 1 | 1 | B.1.234 | 0.000132 |
N | 194 | S194del2 | tCA | t-- | 1 | 1 | B.1.247 | 0.014925 |
N | 194 | S194X | tCa | tAa | 1 | 1 | B.1.258.11 | 0.000396 |
N | 194 | S194S | tcA | tcG | 1 | 1 | B.1.258.17 | 0.000104 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.301 | 0.005917 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.302 | 0.013333 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.306 | 0.005714 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.318 | 0.038462 |
N | 194 | S194P | Tca | Cca | 1 | 1 | B.1.326 | 0.007576 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.336 | 0.002439 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.337 | 0.005587 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.343 | 0.020833 |
N | 194 | S194T | Tca | Aca | 1 | 1 | B.1.350 | 0.002933 |
N | 194 | S194S | tcA | tcT | 1 | 1 | B.1.351 | 0.00003 |
N | 194 | S194A | Tca | Gca | 1 | 1 | B.1.351 | 0.00003 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.355 | 0.011111 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.356 | 0.001727 |
N | 194 | S194F | tCA | tTT | 1 | 1 | B.1.36 | 0.000146 |
N | 194 | S194A | Tca | Gca | 1 | 1 | B.1.36 | 0.000146 |
N | 194 | S194del1 | tCa | t-a | 1 | 1 | B.1.36.1 | 0.00114 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.366 | 0.004878 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.380 | 0.006623 |
N | 194 | S194A | Tca | Gca | 1 | 1 | B.1.391 | 0.001127 |
N | 194 | S194del | TCA | --- | 1 | 1 | B.1.416.1 | 0.001563 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.426 | 0.001009 |
N | 194 | S194P | Tca | Cca | 1 | 1 | B.1.427 | 0.00005 |
N | 194 | S194del | TCA | --- | 1 | 1 | B.1.427 | 0.00005 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.428 | 0.00102 |
N | 194 | S194T | Tca | Aca | 1 | 1 | B.1.429 | 0.000024 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.437 | 0.020833 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.443 | 0.004673 |
N | 194 | S194del | TCA | --- | 1 | 1 | B.1.465 | 0.003802 |
N | 194 | S194P | Tca | Cca | 1 | 1 | B.1.466.2 | 0.000391 |
N | 194 | S194A | Tca | Gca | 1 | 1 | B.1.466.2 | 0.000391 |
N | 194 | S194X | tCa | tAa | 1 | 1 | B.1.468 | 0.005714 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.469 | 0.00361 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.473 | 0.019231 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.491 | 0.052632 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.498 | 0.020408 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.504 | 0.03125 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.523 | 0.002451 |
N | 194 | S194del | TCA | --- | 1 | 1 | B.1.525 | 0.000113 |
N | 194 | S194S | tcA | tcG | 1 | 1 | B.1.526 | 0.000024 |
N | 194 | S194del | TCA | --- | 1 | 1 | B.1.526 | 0.000024 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.530 | 0.007143 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.541 | 0.004425 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.542 | 0.03125 |
N | 194 | S194P | Tca | Cca | 1 | 1 | B.1.565 | 0.00081 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.568 | 0.001111 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.569 | 0.014493 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.575.1 | 0.002439 |
N | 194 | S194del | TCA | --- | 1 | 1 | B.1.576 | 0.000907 |
N | 194 | S194A | Tca | Gca | 1 | 1 | B.1.577 | 0.000687 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.579 | 0.011236 |
N | 194 | S194A | Tca | Gca | 1 | 1 | B.1.580 | 0.004065 |
N | 194 | S194del | TCA | --- | 1 | 1 | B.1.596 | 0.000087 |
N | 194 | S194P | Tca | Cca | 1 | 1 | B.1.596 | 0.000087 |
N | 194 | S194del | TCA | --- | 1 | 1 | B.1.599 | 0.00365 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.605 | 0.005952 |
N | 194 | S194S | tcA | tcT | 1 | 1 | B.1.609 | 0.000479 |
N | 194 | S194del | TCA | --- | 1 | 1 | B.1.617.1 | 0.000129 |
N | 194 | S194del1 | tCa | t-a | 1 | 1 | B.1.617.1 | 0.000129 |
N | 194 | S194del1 | tCa | t-a | 1 | 1 | B.1.617.2 | 0.000004 |
N | 194 | S194A | Tca | Gca | 1 | 1 | B.1.617.2 | 0.000004 |
N | 194 | S194del | TCA | --- | 1 | 1 | B.1.617.2 | 0.000004 |
N | 194 | S194X | tCa | tAa | 1 | 1 | B.1.617.2 | 0.000004 |
N | 194 | S194del2 | TCa | --a | 1 | 1 | B.1.617.2 | 0.000004 |
N | 194 | S194del1 | tCa | t-a | 1 | 1 | B.1.617.3 | 0.002985 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.617.3 | 0.002985 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.619 | 0.000871 |
N | 194 | S194X | tCa | tAa | 1 | 1 | B.1.623 | 0.000536 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.631 | 0.003367 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.633 | 0.041667 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.638 | 0.052632 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.70 | 0.02439 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.83 | 0.015385 |
N | 194 | S194P | Tca | Cca | 1 | 1 | B.1.9 | 0.006173 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.1.94 | 0.027027 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.34 | 0.013699 |
N | 194 | S194del | TCA | --- | 1 | 1 | B.4 | 0.002208 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.4 | 0.002208 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.41 | 0.008 |
N | 194 | S194L | tCa | tTa | 1 | 1 | B.55 | 0.00295 |
N | 194 | S194L | tCa | tTa | 1 | 1 | C.2 | 0.016129 |
N | 194 | S194I | TCa | ATa | 1 | 1 | C.35 | 0.000774 |
N | 194 | S194L | tCa | tTa | 1 | 1 | C.36 | 0.000911 |
N | 194 | S194S | tcA | tcT | 1 | 1 | C.36 | 0.000911 |
N | 194 | S194L | tCa | tTa | 1 | 1 | C.36.3 | 0.000567 |
N | 194 | S194del | TCA | --- | 1 | 1 | C.37.1 | 0.002618 |
N | 194 | S194L | tCa | tTa | 1 | 1 | K.1 | 0.02381 |
N | 194 | S194A | Tca | Gca | 1 | 1 | P.1 | 0.000016 |
N | 194 | S194L | tCa | tTa | 1 | 1 | P.1.10 | 0.000269 |
N | 194 | S194del | TCA | --- | 1 | 1 | P.1.12 | 0.000484 |
N | 194 | S194L | tCa | tTa | 1 | 1 | P.1.13 | 0.000898 |
N | 194 | S194del | TCA | --- | 1 | 1 | P.1.14 | 0.000048 |
N | 194 | S194S | tcA | tcG | 1 | 1 | P.1.15 | 0.000232 |
N | 194 | S194del | TCA | --- | 1 | 1 | P.1.15 | 0.000232 |
N | 194 | S194L | tCa | tTa | 1 | 1 | P.1.15 | 0.000232 |
N | 194 | S194S | tcA | tcT | 1 | 1 | P.1.8 | 0.004785 |
N | 194 | S194P | Tca | Cca | 1 | 1 | P.2 | 0.000187 |
N | 194 | S194L | tCa | tTa | 1 | 1 | P.2 | 0.000187 |
N | 194 | S194L | tCa | tTa | 1 | 1 | P.3 | 0.001595 |
N | 194 | S194L | tCa | tTa | 1 | 1 | Q.1 | 0.000126 |
N | 194 | S194L | tCa | tTa | 1 | 1 | S.1 | 0.00495 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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