CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : CodonNum = 183

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N183S183YnonsyntCttAt72497249128820-28822
N183S183TnonsynTctAct263826370.99962128820-28822
N183S183TnonsynTcTAcG263810.00037907528820-28822
N183S183PnonsynTctCct669669128820-28822
N183S183SsyntcTtcC3021880.62251728820-28822
N183S183SsyntcTtcA302810.26821228820-28822
N183S183SsyntcTtcG302330.10927228820-28822
N183S183FnonsyntCttTt167167128820-28822
N183S183AnonsynTctGct98970.98979628820-28822
N183S183AnonsynTcTGcC9810.010204128820-28822
N183S183deldelTCT---6363128820-28822
N183S183del1delTct-ct430.7528820-28822
N183S183del1deltCtt-t410.2528820-28822
N183S183WnonsyntCTtGG33128820-28822
N183S183XnonsyntCTtAA210.528820-28822
N183S183XnonsyntCTtAG210.528820-28822
N183S183CnonsyntCttGt11128820-28822

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N183S183YtCttAt72497249All0.001386
N183S183YtCttAt34573457B.1.3690.986024
N183S183TTctAct26372638All0.000504
N183S183TTcTAcG12638All0
N183S183YtCttAt22222222B.1.5640.946337
N183S183TTctAct12791279AY.1200.047552
N183S183PTctCct669669All0.000128
N183S183TTctAct640640AY.390.015815
N183S183YtCttAt634634B.1.564.11
N183S183PTctCct534534B.1.2340.070458
N183S183YtCttAt374374B.1.4480.981627
N183S183YtCttAt339339B.10.003105
N183S183StcTtcC188302All0.000036
N183S183StcTtcA81302All0.000015
N183S183StcTtcG33302All0.000006
N183S183TTctAct216216AY.420.00869
N183S183FtCttTt167167All0.000032
N183S183YtCttAt103103B.1.5711
N183S183TTctAct9999AY.1020.002625
N183S183ATctGct9798All0.000019
N183S183ATcTGcC198All0
N183S183TTctAct8989AY.250.000535
N183S183TTctAct8787AY.920.024993
N183S183TTctAct6565B.1.617.20.000245
N183S183delTCT---6363All0.000012
N183S183StcTtcC4458B.1.1.70.000039
N183S183StcTtcA858B.1.1.70.000007
N183S183StcTtcG658B.1.1.70.000005
N183S183FtCttTt5555B.10.000504
N183S183YtCttAt3737B.1.369.11
N183S183ATctGct3535AY.120.20.044987
N183S183TTctAct3535AY.840.015311
N183S183YtCttAt2727B.1.20.000238
N183S183StcTtcA2224AY.1030.000137
N183S183StcTtcC224AY.1030.000012
N183S183ATctGct2020AY.40.000031
N183S183PTctCct1818B.1.617.20.000068
N183S183StcTtcC1516AY.1180.00094
N183S183StcTtcA116AY.1180.000063
N183S183StcTtcA1416AY.4.20.000304
N183S183StcTtcC216AY.4.20.000043
N183S183TTctAct1616AY.430.000071
N183S183FtCttTt1515AY.40.000023
N183S183delTCT---1515B.10.000137
N183S183TTctAct1414AY.770.015784
N183S183FtCttTt1313B.1.1.5190.000516
N183S183StcTtcC613B.1.617.20.000023
N183S183StcTtcG513B.1.617.20.000019
N183S183StcTtcA213B.1.617.20.000008
N183S183PTctCct1212B.10.00011
N183S183PTctCct1212B.1.1.70.000011
N183S183FtCttTt1111AY.250.000066
N183S183TTctAct1111AY.360.00163
N183S183PTctCct1111B.1.20.000097
N183S183FtCttTt1111B.1.910.022822
N183S183ATctGct910B.10.000082
N183S183ATcTGcC110B.10.000009
N183S183delTCT---1010B.1.1.70.000009
N183S183StcTtcC1010B.1.2340.001319
N183S183StcTtcA1010P.1.150.002323
N183S183TTctAct99AY.1050.005788
N183S183TTctAct99AY.230.000628
N183S183PTctCct99AY.40.000014
N183S183StcTtcC99AY.430.00004
N183S183StcTtcC88AY.30.00008
N183S183StcTtcC58B.1.1.2220.00102
N183S183StcTtcG38B.1.1.2220.000612
N183S183StcTtcC48B.1.20.000035
N183S183StcTtcG28B.1.20.000018
N183S183StcTtcA28B.1.20.000018
N183S183YtCttAt88B.1.3670.006339
N183S183PTctCct77AY.1030.000043
N183S183StcTtcC77B.1.177.730.003964
N183S183YtCttAt77B.1.5950.001827
N183S183TTctAct66AY.330.000401
N183S183TTctAct66AY.40.000009
N183S183StcTtcC56AY.60.000206
N183S183StcTtcA16AY.60.000041
N183S183StcTtcC66B.10.000055
N183S183ATctGct66B.1.1.70.000005
N183S183YtCttAt66B.1.5960.000523
N183S183ATctGct55AY.120.2.10.002491
N183S183StcTtcC55AY.200.000194
N183S183TTctAct55AY.4.20.000108
N183S183PTctCct55AY.430.000022
N183S183FtCttTt55B.1.4970.001574
N183S183StcTtcC44A.20.002647
N183S183del1Tct-ct34All0.000001
N183S183del1tCtt-t14All0
N183S183StcTtcC24AY.1020.000053
N183S183StcTtcA24AY.1020.000053
N183S183TTctAct44AY.1030.000025
N183S183StcTtcC24AY.40.000003
N183S183StcTtcA24AY.40.000003
N183S183PTctCct44AY.420.000161
N183S183StcTtcC34AY.440.000018
N183S183StcTtcG14AY.440.000006
N183S183StcTtcG34AY.450.000365
N183S183StcTtcC14AY.450.000122
N183S183TTctAct44AY.46.10.004107
N183S183TTctAct44AY.5.30.00135
N183S183StcTtcA44AY.99.10.006211
N183S183StcTtcA24B.1.10.000036
N183S183StcTtcC24B.1.10.000036
N183S183FtCttTt44B.1.1.70.000004
N183S183YtCttAt44B.1.5440.024096
N183S183FtCttTt44B.1.5640.001704
N183S183StcTtcA24C.370.000232
N183S183StcTtcC24C.370.000232
N183S183FtCttTt44C.380.032258
N183S183TTctAct230.111111
N183S183TTcTAcG130.055556
N183S183WtCTtGG33All0.000001
N183S183StcTtcC23AY.260.000057
N183S183StcTtcG13AY.260.000028
N183S183YtCttAt33AY.40.000005
N183S183StcTtcC33AY.420.000121
N183S183TTctAct33AY.460.000312
N183S183PTctCct33AY.470.000093
N183S183StcTtcC23AY.540.000191
N183S183StcTtcG13AY.540.000095
N183S183PTctCct33AY.750.000168
N183S183StcTtcC23B.1.1770.000026
N183S183StcTtcA13B.1.1770.000013
N183S183ATctGct33B.1.3050.006452
N183S183FtCttTt33B.1.617.20.000011
N183S183ATctGct33P.1.150.000697
N183S183ATctGct220.111111
N183S183StcTtcG120.055556
N183S183StcTtcA120.055556
N183S183XtCTtAG12All0
N183S183XtCTtAA12All0
N183S183FtCttTt22AY.10.000791
N183S183StcTtcC22AY.1170.000169
N183S183ATctGct22AY.1200.000074
N183S183ATctGct22AY.230.000139
N183S183PTctCct22AY.250.000012
N183S183PTctCct22AY.30.00002
N183S183TTctAct22AY.4.50.000215
N183S183delTCT---22AY.400.001929
N183S183delTCT---22AY.430.000009
N183S183FtCttTt22AY.430.000009
N183S183FtCttTt22AY.440.000012
N183S183TTctAct22AY.440.000012
N183S183TTctAct22AY.46.60.000144
N183S183delTCT---22AY.500.001599
N183S183TTctAct22AY.530.000575
N183S183PTctCct22AY.60.000082
N183S183delTCT---22AY.750.000112
N183S183TTctAct22AY.800.002257
N183S183TTctAct22AY.820.002714
N183S183delTCT---22AY.9.20.000073
N183S183PTctCct22AY.99.20.000184
N183S183StcTtcG22AZ.30.00304
N183S183YtCttAt22B0.000256
N183S183TTctAct22B.10.000018
N183S183PTctCct22B.1.10.000036
N183S183delTCT---22B.1.10.000036
N183S183delTCT---22B.1.1.280.000622
N183S183StcTtcA22B.1.1.2840.000215
N183S183PTctCct22B.1.1.3180.000604
N183S183WtCTtGG22B.1.1.70.000002
N183S183XtCTtAG12B.1.1.70.000001
N183S183XtCTtAA12B.1.1.70.000001
N183S183StcTtcA22B.1.1260.002551
N183S183PTctCct22B.1.1280.001271
N183S183FtCttTt22B.1.1600.000062
N183S183StcTtcA12B.1.1600.000031
N183S183StcTtcC12B.1.1600.000031
N183S183FtCttTt22B.1.1770.000026
N183S183delTCT---22B.1.1770.000026
N183S183StcTtcC22B.1.177.120.000303
N183S183FtCttTt22B.1.20.000018
N183S183PTctCct22B.1.2430.000139
N183S183YtCttAt22B.1.2430.000139
N183S183YtCttAt22B.1.5760.001813
N183S183PTctCct22B.1.5960.000174
N183S183YtCttAt22B.1.617.20.000008
N183S183StcTtcG22B.1.621.10.001012
N183S183FtCttTt22C.370.000232
N183S183delTCT---22C.37.10.005236
N183S183FtCttTt22D.20.00015
N183S183PTctCct22P.10.000032
N183S183ATctGct11A.290.005319
N183S183StcTtcC11AE.80.000489
N183S183CtCttGt11All0
N183S183StcTtcC11AY.10.000396
N183S183PTctCct11AY.1000.000046
N183S183StcTtcG11AY.1000.000046
N183S183FtCttTt11AY.1030.000006
N183S183YtCttAt11AY.1030.000006
N183S183StcTtcC11AY.1040.001984
N183S183FtCttTt11AY.1060.000335
N183S183StcTtcC11AY.1070.000466
N183S183StcTtcG11AY.1090.00074
N183S183TTctAct11AY.1130.000142
N183S183StcTtcC11AY.1130.000142
N183S183StcTtcC11AY.1140.000231
N183S183TTctAct11AY.120.000316
N183S183TTctAct11AY.120.10.000321
N183S183StcTtcC11AY.1210.000135
N183S183StcTtcC11AY.160.00038
N183S183PTctCct11AY.200.000039
N183S183FtCttTt11AY.200.000039
N183S183StcTtcC11AY.250.000006
N183S183delTCT---11AY.250.000006
N183S183ATctGct11AY.260.000028
N183S183PTctCct11AY.290.000016
N183S183delTCT---11AY.30.00001
N183S183StcTtcC11AY.360.000148
N183S183StcTtcC11AY.390.000025
N183S183FtCttTt11AY.390.000025
N183S183del1Tct-ct11AY.39.10.00004
N183S183PTctCct11AY.4.20.000022
N183S183ATctGct11AY.4.20.000022
N183S183FtCttTt11AY.4.20.000022
N183S183TTctAct11AY.400.000964
N183S183PTctCct11AY.410.000294
N183S183ATctGct11AY.430.000004
N183S183PTctCct11AY.440.000006
N183S183delTCT---11AY.460.000104
N183S183StcTtcC11AY.46.40.000165
N183S183del1Tct-ct11AY.470.000031
N183S183delTCT---11AY.50.000021
N183S183StcTtcC11AY.50.000021
N183S183TTctAct11AY.50.000021
N183S183TTctAct11AY.5.20.002463
N183S183StcTtcC11AY.5.40.000277
N183S183StcTtcC11AY.530.000288
N183S183FtCttTt11AY.600.000938
N183S183TTctAct11AY.610.000105
N183S183PTctCct11AY.75.10.00018
N183S183TTctAct11AY.830.001724
N183S183FtCttTt11AY.9.20.000037
N183S183TTctAct11AY.9.20.000037
N183S183StcTtcC11AY.9.20.000037
N183S183PTctCct11AY.9.20.000037
N183S183delTCT---11AY.950.000761
N183S183TTctAct11AY.950.000761
N183S183TTctAct11AY.970.001701
N183S183FtCttTt11AY.980.000079
N183S183TTctAct11AY.980.000079
N183S183StcTtcC11AY.99.20.000092
N183S183ATctGct11B0.000128
N183S183FtCttTt11B.1.10.000018
N183S183FtCttTt11B.1.1.1740.003378
N183S183TTctAct11B.1.1.1980.001468
N183S183StcTtcG11B.1.1.2140.000055
N183S183PTctCct11B.1.1.2300.009174
N183S183ATctGct11B.1.1.2310.003096
N183S183YtCttAt11B.1.1.280.000311
N183S183ATctGct11B.1.1.280.000311
N183S183FtCttTt11B.1.1.3060.000438
N183S183TTctAct11B.1.1.3060.000438
N183S183StcTtcC11B.1.1.3060.000438
N183S183FtCttTt11B.1.1.3110.000358
N183S183PTctCct11B.1.1.3120.001912
N183S183delTCT---11B.1.1.330.000421
N183S183FtCttTt11B.1.1.3720.000689
N183S183PTctCct11B.1.1.3930.111111
N183S183PTctCct11B.1.1.4860.001577
N183S183PTctCct11B.1.1.500.000679
N183S183StcTtcC11B.1.1.5190.00004
N183S183del1tCtt-t11B.1.1.70.000001
N183S183YtCttAt11B.1.1.70.000001
N183S183TTctAct11B.1.1.70.000001
N183S183ATctGct11B.1.1600.000031
N183S183StcTtcC11B.1.160.120.00641
N183S183PTctCct11B.1.1770.000013
N183S183TTctAct11B.1.1770.000013
N183S183FtCttTt11B.1.177.100.000878
N183S183StcTtcC11B.1.177.210.000076
N183S183FtCttTt11B.1.177.230.003236
N183S183StcTtcA11B.1.177.250.014925
N183S183PTctCct11B.1.177.40.000211
N183S183StcTtcC11B.1.177.630.002703
N183S183delTCT---11B.1.177.680.015152
N183S183PTctCct11B.1.177.730.000566
N183S183PTctCct11B.1.177.90.001332
N183S183YtCttAt11B.1.1890.004292
N183S183del1Tct-ct11B.1.20.000009
N183S183TTctAct11B.1.20.000009
N183S183delTCT---11B.1.20.000009
N183S183PTctCct11B.1.2100.002132
N183S183FtCttTt11B.1.2100.002132
N183S183PTctCct11B.1.2210.000071
N183S183StcTtcC11B.1.2210.000071
N183S183YtCttAt11B.1.2340.000132
N183S183TTctAct11B.1.2400.000216
N183S183StcTtcC11B.1.2430.00007
N183S183PTctCct11B.1.2580.000067
N183S183FtCttTt11B.1.2580.000067
N183S183PTctCct11B.1.258.20.004505
N183S183StcTtcC11B.1.2650.001271
N183S183YtCttAt11B.1.2840.013158
N183S183WtCTtGG11B.1.3110.000275
N183S183YtCttAt11B.1.3110.000275
N183S183YtCttAt11B.1.3330.010526
N183S183FtCttTt11B.1.3510.00003
N183S183delTCT---11B.1.3510.00003
N183S183StcTtcC11B.1.3510.00003
N183S183PTctCct11B.1.3510.00003
N183S183FtCttTt11B.1.360.000146
N183S183PTctCct11B.1.360.000146
N183S183PTctCct11B.1.36.80.001
N183S183YtCttAt11B.1.3960.000706
N183S183delTCT---11B.1.416.10.001563
N183S183StcTtcC11B.1.4200.010417
N183S183PTctCct11B.1.4270.00005
N183S183delTCT---11B.1.4270.00005
N183S183YtCttAt11B.1.4270.00005
N183S183FtCttTt11B.1.4270.00005
N183S183YtCttAt11B.1.4290.000024
N183S183PTctCct11B.1.4560.003268
N183S183delTCT---11B.1.4650.003802
N183S183YtCttAt11B.1.5010.007353
N183S183YtCttAt11B.1.5090.000866
N183S183FtCttTt11B.1.5090.000866
N183S183PTctCct11B.1.5090.000866
N183S183ATctGct11B.1.5090.000866
N183S183YtCttAt11B.1.5210.004975
N183S183delTCT---11B.1.5250.000113
N183S183StcTtcG11B.1.5250.000113
N183S183PTctCct11B.1.5260.000024
N183S183YtCttAt11B.1.5460.003704
N183S183delTCT---11B.1.5600.00463
N183S183YtCttAt11B.1.5720.025
N183S183delTCT---11B.1.5760.000907
N183S183YtCttAt11B.1.5800.004065
N183S183YtCttAt11B.1.5810.009434
N183S183FtCttTt11B.1.5950.000261
N183S183PTctCct11B.1.5950.000261
N183S183TTctAct11B.1.5960.000087
N183S183delTCT---11B.1.5960.000087
N183S183YtCttAt11B.1.6070.052632
N183S183PTctCct11B.1.617.10.000129
N183S183delTCT---11B.1.617.10.000129
N183S183FtCttTt11B.1.617.10.000129
N183S183StcTtcC11B.1.617.10.000129
N183S183delTCT---11B.1.617.20.000004
N183S183CtCttGt11B.1.617.20.000004
N183S183FtCttTt11B.1.6180.004032
N183S183StcTtcG11B.1.6210.000089
N183S183ATctGct11B.1.6230.000536
N183S183YtCttAt11B.1.88.10.004808
N183S183FtCttTt11B.400.000364
N183S183StcTtcC11C.350.000774
N183S183FtCttTt11C.37.10.002618
N183S183StcTtcG11D.20.000075
N183S183delTCT---11P.10.000016
N183S183TTctAct11P.10.000016
N183S183StcTtcA11P.1.140.000048
N183S183delTCT---11P.1.150.000232
N183S183StcTtcC11P.20.000187
N183S183PTctCct11Y.10.012821