CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : CodonNum = 139 & Codon = ttT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N139L139FnonsynttGttT20998131530.62639328688-28690

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N139L139FttGttT1315320998All0.002516
N139L139FttGttT7068315B.1.1.70.000632
N139L139FttGttT29272932AY.40.004556
N139L139FttGttT24112411AY.300.954096
N139L139FttGttT21622165B.1.617.20.008141
N139L139FttGttT631631AY.400.608486
N139L139FttGttT511514B.1.1770.006729
N139L139FttGttT505505B.1.3750.413934
N139L139FttGttT221241B.10.002024
N139L139FttGttT221227AY.440.001345
N139L139FttGttT210212AY.1020.005568
N139L139FttGttT203204AY.430.000899
N139L139FttGttT151151AY.90.010207
N139L139FttGttT87135B.1.10.001578
N139L139FttGttT102110AY.250.000614
N139L139FttGttT9999B.1.4410.951923
N139L139FttGttT9898B.1.360.014298
N139L139FttGttT8990AY.30.000885
N139L139FttGttT8788B.1.4290.002047
N139L139FttGttT8585B.1.177.210.0065
N139L139FttGttT6277B.1.1600.001934
N139L139FttGttT5560AY.1030.000341
N139L139FttGttT5460B.1.3510.001605
N139L139FttGttT5558B.1.20.000484
N139L139FttGttT5555AY.46.60.003971
N139L139FttGttT5353B.1.2230.147222
N139L139FttGttT4444B.1.1.5190.001747
N139L139FttGttT4142AY.290.000647
N139L139FttGttT3940B.1.1.3180.011768
N139L139FttGttT3737B.1.2430.002575
N139L139FttGttT336Q.10.000379
N139L139FttGttT3333B.1.5510.042581
N139L139FttGttT3131AY.390.000766
N139L139FttGttT2930AY.4.20.000629
N139L139FttGttT2929B.1.5650.023501
N139L139FttGttT2828AY.1000.001288
N139L139FttGttT2727AY.16.10.012688
N139L139FttGttT2727AY.590.014301
N139L139FttGttT2727AY.690.00504
N139L139FttGttT2525B.1.1.1170.242718
N139L139FttGttT2424B.1.2410.019481
N139L139FttGttT2323AY.200.000894
N139L139FttGttT1822B.1.5260.000423
N139L139FttGttT1120AY.9.20.000404
N139L139FttGttT1819AY.50.000372
N139L139FttGttT1919B.1.1890.081545
N139L139FttGttT1717AY.260.000481
N139L139FttGttT1717AY.670.007892
N139L139FttGttT1717B.1.617.10.002192
N139L139FttGttT1616A.2.50.007984
N139L139FttGttT1616AY.1160.004588
N139L139FttGttT516AY.460.00052
N139L139FttGttT1616B.1.177.570.004496
N139L139FttGttT1516B.1.2210.001065
N139L139FttGttT1515AY.650.007996
N139L139FttGttT1515AY.930.004096
N139L139FttGttT1515B.1.1.5180.094937
N139L139FttGttT1414AY.1130.001993
N139L139FttGttT1414AY.450.001704
N139L139FttGttT1313AY.980.001027
N139L139FttGttT1212AY.4.50.00129
N139L139FttGttT1111AY.850.004699
N139L139FttGttT1111B.1.1.1210.026699
N139L139FttGttT1111B.1.177.60.010742
N139L139FttGttT1010AY.490.031949
N139L139FttGttT1010Q.30.00145
N139L139FttGttT89AY.1180.000501
N139L139FttGttT79AY.330.000467
N139L139FttGttT99AY.39.10.000357
N139L139FttGttT99AY.5.30.003036
N139L139FttGttT99B.1.4270.000454
N139L139FttGttT69Q.80.000989
N139L139FttGttT88AY.230.000558
N139L139FttGttT88AY.340.000776
N139L139FttGttT88AY.420.000322
N139L139FttGttT88AY.750.000448
N139L139FttGttT78AY.98.10.000339
N139L139FttGttT68B.1.177.730.003398
N139L139FttGttT77AY.1170.000592
N139L139FttGttT77AY.1190.000247
N139L139FttGttT77AY.20.002493
N139L139FttGttT77AY.60.000288
N139L139FttGttT77AY.75.10.001262
N139L139FttGttT77AY.860.005809
N139L139FttGttT77B.1.1.2560.09589
N139L139FttGttT77B.1.1.4200.007042
N139L139FttGttT77B.1.160.290.029536
N139L139FttGttT66AY.1060.002009
N139L139FttGttT16AY.360.000148
N139L139FttGttT66AY.620.002614
N139L139FttGttT66AY.740.000694
N139L139FttGttT66AY.9.10.000502
N139L139FttGttT66B0.000767
N139L139FttGttT66B.1.1.1570.005479
N139L139FttGttT66B.1.36.290.003104
N139L139FttGttT66B.1.3610.007732
N139L139FttGttT66B.1.4560.019608
N139L139FttGttT66B.1.5720.15
N139L139FttGttT66B.1.6210.000531
N139L139FttGttT66C.370.000696
N139L139FttGttT45AY.1200.000149
N139L139FttGttT55AY.470.000156
N139L139FttGttT45AY.610.000419
N139L139FttGttT55AY.680.001369
N139L139FttGttT55B.1.1.1980.007342
N139L139FttGttT55B.1.177.120.000758
N139L139FttGttT55B.1.177.820.002387
N139L139FttGttT55B.1.2340.00066
N139L139FttGttT25B.1.5250.000226
N139L139FttGttT55B.1.6370.000365
N139L139FttGttT15P.10.000016
N139L139FttGttT55P.20.000933
N139L139FttGttT44AY.130.000644
N139L139FttGttT44AY.280.007561
N139L139FttGttT44AY.46.10.004107
N139L139FttGttT44AY.540.000381
N139L139FttGttT44B.1.3670.00317
N139L139FttGttT44B.1.438.10.000429
N139L139FttGttT44B.1.5600.018519
N139L139FttGttT44B.1.5960.000349
N139L139FttGttT44R.10.00036
N139L139FttGttT330.166667
N139L139FttGttT33AY.100.00159
N139L139FttGttT33AY.140.000264
N139L139FttGttT33AY.160.001139
N139L139FttGttT33AY.3.10.000256
N139L139FttGttT33AY.320.001597
N139L139FttGttT13AY.46.40.000165
N139L139FttGttT33AY.510.002727
N139L139FttGttT33AY.570.001969
N139L139FttGttT33AY.600.002814
N139L139FttGttT13AY.70.000196
N139L139FttGttT33AY.99.20.000276
N139L139FttGttT33B.1.1.1890.004539
N139L139FttGttT33B.1.110.30.002155
N139L139FttGttT33B.1.2140.010989
N139L139FttGttT33B.1.2580.0002
N139L139FttGttT33B.1.4160.003807
N139L139FttGttT33B.1.6230.001609
N139L139FttGttT22A0.000774
N139L139FttGttT22AY.10.000791
N139L139FttGttT22AY.1050.001286
N139L139FttGttT22AY.1100.000225
N139L139FttGttT22AY.34.10.00102
N139L139FttGttT22AY.380.000999
N139L139FttGttT22AY.39.1.10.001449
N139L139FttGttT22AY.7.10.000225
N139L139FttGttT12AY.770.001127
N139L139FttGttT22AY.790.002421
N139L139FttGttT22AY.840.000875
N139L139FttGttT22AY.920.000575
N139L139FttGttT22AY.990.002099
N139L139FttGttT22B.1.1.2220.000408
N139L139FttGttT22B.1.1.3160.00185
N139L139FttGttT22B.1.1.3440.021505
N139L139FttGttT22B.1.1.370.000386
N139L139FttGttT22B.1.1.4240.090909
N139L139FttGttT22B.1.177.520.003515
N139L139FttGttT22B.1.177.690.002967
N139L139FttGttT22B.1.214.20.001199
N139L139FttGttT22B.1.2320.001075
N139L139FttGttT22B.1.2390.002442
N139L139FttGttT22B.1.36.310.003503
N139L139FttGttT22B.1.36.380.003284
N139L139FttGttT22B.1.3690.00057
N139L139FttGttT22B.1.5440.012048
N139L139FttGttT22B.1.5950.000522
N139L139FttGttT11A.10.000282
N139L139FttGttT11A.2.5.20.001572
N139L139FttGttT11A.23.10.000704
N139L139FttGttT11A.290.005319
N139L139FttGttT11AY.1110.000183
N139L139FttGttT11AY.190.00114
N139L139FttGttT11AY.270.000065
N139L139FttGttT11AY.310.018519
N139L139FttGttT11AY.370.000316
N139L139FttGttT11AY.4.40.000409
N139L139FttGttT11AY.410.000294
N139L139FttGttT11AY.46.50.000198
N139L139FttGttT11AY.480.000465
N139L139FttGttT11AY.500.000799
N139L139FttGttT11AY.530.000288
N139L139FttGttT11AY.550.000917
N139L139FttGttT11AY.560.001605
N139L139FttGttT11AY.580.000907
N139L139FttGttT11AY.710.000475
N139L139FttGttT11AY.820.001357
N139L139FttGttT11AY.830.001724
N139L139FttGttT11AY.870.000833
N139L139FttGttT11AY.910.00073
N139L139FttGttT11AZ.20.000821
N139L139FttGttT11B.1.1.100.001115
N139L139FttGttT11B.1.1.1130.006993
N139L139FttGttT11B.1.1.1200.033333
N139L139FttGttT11B.1.1.130.035714
N139L139FttGttT11B.1.1.1580.012195
N139L139FttGttT11B.1.1.1610.003534
N139L139FttGttT11B.1.1.1860.003436
N139L139FttGttT11B.1.1.2280.003049
N139L139FttGttT11B.1.1.2310.003096
N139L139FttGttT11B.1.1.250.000569
N139L139FttGttT11B.1.1.3060.000438
N139L139FttGttT11B.1.1.3170.000412
N139L139FttGttT11B.1.1.3200.018182
N139L139FttGttT11B.1.1.330.000421
N139L139FttGttT11B.1.1.3350.012987
N139L139FttGttT11B.1.1.3480.000796
N139L139FttGttT11B.1.1.3650.005587
N139L139FttGttT11B.1.1.3710.010417
N139L139FttGttT11B.1.1.3750.011905
N139L139FttGttT11B.1.1.3980.003226
N139L139FttGttT11B.1.1.4190.007407
N139L139FttGttT11B.1.1.630.000386
N139L139FttGttT11B.1.1060.03125
N139L139FttGttT11B.1.1100.004525
N139L139FttGttT11B.1.1110.001175
N139L139FttGttT11B.1.1150.021739
N139L139FttGttT11B.1.1280.000635
N139L139FttGttT11B.1.1590.012195
N139L139FttGttT11B.1.160.230.004831
N139L139FttGttT11B.1.160.260.002421
N139L139FttGttT11B.1.177.460.000918
N139L139FttGttT11B.1.177.650.000665
N139L139FttGttT11B.1.177.70.000165
N139L139FttGttT11B.1.177.790.002342
N139L139FttGttT11B.1.177.830.001481
N139L139FttGttT11B.1.258.170.000104
N139L139FttGttT11B.1.3330.010526
N139L139FttGttT11B.1.3460.001311
N139L139FttGttT11B.1.3490.000715
N139L139FttGttT11B.1.36.10.00114
N139L139FttGttT11B.1.36.100.004785
N139L139FttGttT11B.1.36.160.001425
N139L139FttGttT11B.1.36.190.009259
N139L139FttGttT11B.1.36.260.002857
N139L139FttGttT11B.1.36.270.000763
N139L139FttGttT11B.1.36.80.001
N139L139FttGttT11B.1.3620.001541
N139L139FttGttT11B.1.3890.001002
N139L139FttGttT11B.1.4040.001302
N139L139FttGttT11B.1.4590.004082
N139L139FttGttT11B.1.4990.00105
N139L139FttGttT11B.1.5170.000427
N139L139FttGttT11B.1.5610.000397
N139L139FttGttT11B.1.5640.000426
N139L139FttGttT11B.1.5750.000303
N139L139FttGttT11B.1.6060.006024
N139L139FttGttT11B.1.6090.000479
N139L139FttGttT11B.1.6180.004032
N139L139FttGttT11B.1.6190.000871
N139L139FttGttT11C.260.007353
N139L139FttGttT11C.36.30.000567
N139L139FttGttT11D.20.000075
N139L139FttGttT11N.40.004255
N139L139FttGttT11P.1.150.000232
N139L139FttGttT11Y.10.012821