CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : CodonNum = 138

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N138A138AsyngcCgcT271322390.82528628685-28687
N138A138AsyngcCgcA27134720.17397728685-28687
N138A138AsyngcCgcG271320.00073719128685-28687
N138A138SnonsynGccTcc9629590.99688128685-28687
N138A138SnonsynGCcAGc96220.00207928685-28687
N138A138SnonsynGcCTcG96210.001039528685-28687
N138A138TnonsynGccAcc870.87528685-28687
N138A138TnonsynGcCAcG810.12528685-28687
N138A138GnonsyngCcgGc750.71428628685-28687
N138A138GnonsyngCCgGT710.14285728685-28687
N138A138GnonsyngCCgGG710.14285728685-28687
N138A138VnonsyngCcgTc66128685-28687
N138A138deldelGCC---44128685-28687
N138A138PnonsynGccCcc320.66666728685-28687
N138A138PnonsynGcCCcG310.33333328685-28687
N138A138DnonsyngCcgAc22128685-28687
N138A138WnonsynGCCTGG11128685-28687
N138A138RnonsynGCCAGG11128685-28687
N138A138CnonsynGCcTGc11128685-28687
N138A138del1delgcCgc-11128685-28687

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N138A138AgcCgcT22392713All0.000428
N138A138AgcCgcA4722713All0.00009
N138A138AgcCgcG22713All0
N138A138AgcCgcT9651003B.1.1.70.000864
N138A138AgcCgcA381003B.1.1.70.000034
N138A138SGccTcc959962All0.000183
N138A138SGCcAGc2962All0
N138A138SGcCTcG1962All0
N138A138AgcCgcT646647AY.40.001005
N138A138AgcCgcA1647AY.40.000002
N138A138AgcCgcA218238B.1.4290.005129
N138A138AgcCgcT20238B.1.4290.000471
N138A138SGccTcc177177AY.40.000275
N138A138SGccTcc157157B.1.1.70.000141
N138A138SGccTcc138138AY.430.000611
N138A138AgcCgcA124130AY.260.00351
N138A138AgcCgcT6130AY.260.00017
N138A138SGccTcc114114AY.1190.004025
N138A138SGccTcc9191B.1.617.20.000343
N138A138AgcCgcT5774AY.430.000253
N138A138AgcCgcA1774AY.430.000075
N138A138AgcCgcT6567AY.250.000391
N138A138AgcCgcA267AY.250.000012
N138A138AgcCgcT4650B.1.617.20.000173
N138A138AgcCgcA450B.1.617.20.000015
N138A138AgcCgcT4848AY.1030.000298
N138A138AgcCgcT4445B.1.20.000387
N138A138AgcCgcA145B.1.20.000009
N138A138SGccTcc3434AY.1020.000901
N138A138AgcCgcT3132B.1.1770.000408
N138A138AgcCgcA132B.1.1770.000013
N138A138SGccTcc3131AY.250.000186
N138A138AgcCgcT2728P.1.70.008621
N138A138AgcCgcA128P.1.70.000319
N138A138AgcCgcT2424AY.440.000146
N138A138AgcCgcA2222AJ.11
N138A138SGccTcc2222AY.1030.000137
N138A138AgcCgcT2222AY.630.008511
N138A138AgcCgcA1020B.10.000092
N138A138AgcCgcT1020B.10.000092
N138A138AgcCgcT1717P.10.000268
N138A138AgcCgcT1616B.1.1.3690.00714
N138A138AgcCgcA1414B.1.1.2200.026022
N138A138AgcCgcT1212AY.270.000777
N138A138SGccTcc1212AY.390.000297
N138A138AgcCgcT1212B.1.177.750.012487
N138A138AgcCgcT1111AY.30.000109
N138A138AgcCgcT1011AY.390.000247
N138A138AgcCgcA111AY.390.000025
N138A138SGccTcc1111B.1.177.810.002083
N138A138SGccTcc1010AY.200.000389
N138A138AgcCgcT710AY.200.000272
N138A138AgcCgcA310AY.200.000117
N138A138AgcCgcT1010AY.39.10.000396
N138A138TGccAcc78All0.000001
N138A138TGcCAcG18All0
N138A138AgcCgcT78AY.460.000729
N138A138AgcCgcA18AY.460.000104
N138A138AgcCgcT78B.1.10.000127
N138A138AgcCgcA18B.1.10.000018
N138A138AgcCgcT78B.1.5960.00061
N138A138AgcCgcA18B.1.5960.000087
N138A138SGccTcc77A.2.50.003493
N138A138GgCcgGc57All0.000001
N138A138GgCCgGG17All0
N138A138GgCCgGT17All0
N138A138SGccTcc77B.1.617.10.000903
N138A138VgCcgTc66All0.000001
N138A138SGccTcc66AY.330.000401
N138A138SGccTcc66B.10.000055
N138A138SGccTcc55AY.230.000349
N138A138AgcCgcT55AY.4.40.002046
N138A138AgcCgcT55AY.610.000524
N138A138SGccTcc55B.1.10.000091
N138A138SGccTcc55B.1.1770.000066
N138A138AgcCgcT55B.1.2210.000355
N138A138SGccTcc55B.1.4270.000252
N138A138SGccTcc55B.1.4290.000118
N138A138SGccTcc55B.1.5260.000118
N138A138AgcCgcT45C.370.000464
N138A138AgcCgcA15C.370.000116
N138A138delGCC---44All0.000001
N138A138SGccTcc44AY.30.00004
N138A138AgcCgcT44AY.4.2.10.000596
N138A138SGccTcc44AY.440.000024
N138A138SGccTcc44AY.450.000487
N138A138AgcCgcT34AY.50.000062
N138A138AgcCgcA14AY.50.000021
N138A138AgcCgcT44AY.750.000224
N138A138SGccTcc44AY.90.00027
N138A138SGccTcc44B.1.1.5190.000159
N138A138SGccTcc44B.1.360.000584
N138A138AgcCgcT44B.1.5750.001214
N138A138SGccTcc44D.20.0003
N138A138GgCcgGc230.111111
N138A138TGccAcc230.111111
N138A138SGCcAGc130.055556
N138A138SGccTcc130.055556
N138A138SGcCTcG130.055556
N138A138GgCCgGG130.055556
N138A138TGcCAcG130.055556
N138A138PGccCcc23All0
N138A138PGcCCcG13All0
N138A138AgcCgcT33AY.1080.003308
N138A138SGccTcc33AY.1180.000188
N138A138AgcCgcT23AY.1190.000071
N138A138AgcCgcG13AY.1190.000035
N138A138SGccTcc33AY.160.001139
N138A138AgcCgcT33AY.420.000121
N138A138SGccTcc33AY.460.000312
N138A138AgcCgcT33B.1.1.3840.071429
N138A138AgcCgcT33B.1.177.440.001557
N138A138AgcCgcT33C.10.007177
N138A138SGccTcc33P.10.000047
N138A138DgCcgAc22All0
N138A138SGccTcc22AY.1080.002205
N138A138AgcCgcA22AY.230.000139
N138A138AgcCgcT22AY.290.000032
N138A138SGccTcc22AY.3.10.000171
N138A138AgcCgcT22AY.330.000134
N138A138SGccTcc22AY.340.000194
N138A138SGccTcc22AY.5.40.000553
N138A138AgcCgcT12AY.530.000288
N138A138AgcCgcA12AY.530.000288
N138A138AgcCgcT22AY.570.001312
N138A138SGccTcc22AY.610.00021
N138A138SGccTcc22AY.9.10.000167
N138A138SGccTcc22AY.980.000158
N138A138SGccTcc22AZ.10.001735
N138A138SGccTcc22B0.000256
N138A138VgCcgTc22B.10.000018
N138A138AgcCgcT22B.1.1.250.001137
N138A138AgcCgcT22B.1.1.2840.000215
N138A138SGccTcc22B.1.1100.00905
N138A138AgcCgcT22B.1.1470.001512
N138A138AgcCgcT22B.1.1600.000062
N138A138SGccTcc22B.1.177.110.003396
N138A138SGccTcc22B.1.20.000018
N138A138SGccTcc22B.1.214.20.001199
N138A138AgcCgcT12B.1.4270.00005
N138A138AgcCgcA12B.1.4270.00005
N138A138AgcCgcT12B.1.438.10.000107
N138A138AgcCgcA12B.1.438.10.000107
N138A138SGccTcc22B.1.6210.000177
N138A138AgcCgcT22B.4.60.033333
N138A138AgcCgcT22P.1.150.000465
N138A138SGccTcc22Q.80.00033
N138A138VgCcgTc110.055556
N138A138CGCcTGc110.055556
N138A138RGCCAGG110.055556
N138A138WGCCTGG110.055556
N138A138AgcCgcG110.055556
N138A138PGcCCcG11A0.000387
N138A138AgcCgcT11A.2.50.000499
N138A138SGccTcc11A.23.10.000704
N138A138AgcCgcT11A.23.10.000704
N138A138WGCCTGG11All0
N138A138del1gcCgc-11All0
N138A138RGCCAGG11All0
N138A138CGCcTGc11All0
N138A138AgcCgcT11AW.10.003049
N138A138SGccTcc11AY.1000.000046
N138A138AgcCgcT11AY.1000.000046
N138A138PGccCcc11AY.1000.000046
N138A138SGccTcc11AY.1010.00049
N138A138AgcCgcT11AY.1020.000027
N138A138SGccTcc11AY.1050.000643
N138A138AgcCgcA11AY.1130.000142
N138A138SGccTcc11AY.1160.000287
N138A138SGccTcc11AY.116.10.000311
N138A138SGccTcc11AY.1200.000037
N138A138SGccTcc11AY.130.000161
N138A138AgcCgcT11AY.140.000088
N138A138del1gcCgc-11AY.290.000016
N138A138SGccTcc11AY.290.000016
N138A138AgcCgcT11AY.340.000097
N138A138SGccTcc11AY.370.000316
N138A138SGccTcc11AY.39.10.00004
N138A138delGCC---11AY.40.000002
N138A138SGccTcc11AY.420.00004
N138A138GgCCgGT11AY.440.000006
N138A138TGccAcc11AY.440.000006
N138A138AgcCgcA11AY.450.000122
N138A138AgcCgcT11AY.46.40.000165
N138A138AgcCgcA11AY.46.60.000072
N138A138AgcCgcT11AY.480.000465
N138A138AgcCgcA11AY.590.00053
N138A138SGccTcc11AY.640.000595
N138A138DgCcgAc11AY.670.000464
N138A138SGccTcc11AY.740.000116
N138A138SGccTcc11AY.750.000056
N138A138SGccTcc11AY.75.10.00018
N138A138AgcCgcT11AY.9.10.000084
N138A138SGccTcc11AY.9.20.000037
N138A138AgcCgcT11AY.930.000273
N138A138AgcCgcT11AY.960.002075
N138A138AgcCgcT11AY.980.000079
N138A138SGccTcc11AY.98.10.000048
N138A138AgcCgcT11AY.98.10.000048
N138A138AgcCgcT11AY.990.001049
N138A138AgcCgcT11AY.99.20.000092
N138A138AgcCgcT11B0.000128
N138A138DgCcgAc11B.10.000009
N138A138TGccAcc11B.1.1.1610.003534
N138A138AgcCgcT11B.1.1.2630.001558
N138A138AgcCgcT11B.1.1.2790.001121
N138A138TGccAcc11B.1.1.280.000311
N138A138SGCcAGc11B.1.1.280.000311
N138A138GgCcgGc11B.1.1.280.000311
N138A138SGccTcc11B.1.1.3010.001179
N138A138SGccTcc11B.1.1.3180.000302
N138A138AgcCgcT11B.1.1.3180.000302
N138A138AgcCgcT11B.1.1.3760.005952
N138A138AgcCgcT11B.1.1.4090.002833
N138A138SGccTcc11B.1.1.4160.000905
N138A138delGCC---11B.1.1.4200.001006
N138A138AgcCgcT11B.1.1.5190.00004
N138A138TGccAcc11B.1.1.70.000001
N138A138VgCcgTc11B.1.1.70.000001
N138A138SGccTcc11B.1.177.40.000211
N138A138GgCcgGc11B.1.177.630.002703
N138A138delGCC---11B.1.177.830.001481
N138A138PGccCcc11B.1.20.000009
N138A138GgCcgGc11B.1.2210.000071
N138A138AgcCgcT11B.1.2270.047619
N138A138AgcCgcT11B.1.2340.000132
N138A138SGccTcc11B.1.258.170.000104
N138A138AgcCgcT11B.1.3400.004292
N138A138AgcCgcT11B.1.3510.00003
N138A138SGccTcc11B.1.3510.00003
N138A138AgcCgcT11B.1.351.20.000303
N138A138SGccTcc11B.1.36.290.000517
N138A138AgcCgcA11B.1.3690.000285
N138A138SGccTcc11B.1.3690.000285
N138A138delGCC---11B.1.4270.00005
N138A138AgcCgcT11B.1.4280.00102
N138A138AgcCgcT11B.1.466.20.000391
N138A138SGccTcc11B.1.4990.00105
N138A138AgcCgcT11B.1.5250.000113
N138A138SGccTcc11B.1.5250.000113
N138A138VgCcgTc11B.1.5260.000024
N138A138SGccTcc11B.1.5640.000426
N138A138AgcCgcT11B.1.5760.000907
N138A138SGccTcc11B.1.5960.000087
N138A138TGccAcc11B.1.617.20.000004
N138A138VgCcgTc11B.1.617.20.000004
N138A138AgcCgcT11B.1.6210.000089
N138A138AgcCgcT11B.1.6270.00202
N138A138SGccTcc11B.1.6340.003425
N138A138AgcCgcT11B.1.930.000934
N138A138AgcCgcT11C.36.10.004149
N138A138AgcCgcT11D.20.000075
N138A138AgcCgcT11P.1.10.000318
N138A138AgcCgcT11P.1.140.000048
N138A138SGccTcc11P.1.170.000162
N138A138AgcCgcT11P.1.20.001156
N138A138SGccTcc11Q.10.000126
N138A138SGccTcc11Q.40.000455
N138A138SGccTcc11W.40.001351