CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = N : CodonNum = 126

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
N126N126NsynaaCaaT2334123341128649-28651
N126N126SnonsynaAcaGc1991950.979928649-28651
N126N126KnonsynaaCaaA1991690.84924628649-28651
N126N126KnonsynaaCaaG199300.15075428649-28651
N126N126SnonsynAAcTCc19940.020100528649-28651
N126N126TnonsynaAcaCc3333128649-28651
N126N126YnonsynAacTac2929128649-28651
N126N126DnonsynAacGac22200.90909128649-28651
N126N126DnonsynAaCGaT2220.090909128649-28651
N126N126InonsynaAcaTc16150.937528649-28651
N126N126InonsynaACaTT1610.062528649-28651
N126N126deldelAAC---88128649-28651
N126N126AnonsynAAcGCc22128649-28651
N126N126VnonsynAAcGTc22128649-28651
N126N126FnonsynAAcTTc22128649-28651
N126N126del1delaaCaa-22128649-28651
N126N126PnonsynAAcCCc11128649-28651
N126N126HnonsynAacCac11128649-28651
N126N126MnonsynaACaTG11128649-28651

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
N126N126NaaCaaT2334123341All0.004464
N126N126NaaCaaT1367513675B.1.2210.971374
N126N126NaaCaaT29862986B.1.1.70.002673
N126N126NaaCaaT11871187B.1.221.30.989167
N126N126NaaCaaT685685AY.40.001066
N126N126NaaCaaT437437AY.9.20.016051
N126N126NaaCaaT344344B.1.221.11
N126N126NaaCaaT260260B.1.1.5190.010325
N126N126NaaCaaT243243B.1.221.20.975904
N126N126NaaCaaT239239B.1.221.40.995833
N126N126NaaCaaT228228B.1.617.20.000859
N126N126NaaCaaT215215AY.1030.001335
N126N126SaAcaGc195199All0.000037
N126N126KaaCaaA169199All0.000032
N126N126KaaCaaG30199All0.000006
N126N126SAAcTCc4199All0.000001
N126N126NaaCaaT190190B.1.20.001673
N126N126NaaCaaT182182B.10.001667
N126N126NaaCaaT167167AY.430.00074
N126N126NaaCaaT137137AY.250.000824
N126N126NaaCaaT125125B.1.1770.001646
N126N126SaAcaGc122122B.1.1.70.000109
N126N126NaaCaaT110110AY.440.00067
N126N126NaaCaaT9999AY.30.000985
N126N126NaaCaaT7979AK.11
N126N126NaaCaaT7272AY.98.10.003487
N126N126NaaCaaT7171B.1.10.001288
N126N126NaaCaaT6060B.1.36.210.12959
N126N126NaaCaaT5454B.1.4290.001271
N126N126NaaCaaT5353B.1.2430.003688
N126N126NaaCaaT5151P.10.000803
N126N126NaaCaaT4949B.1.1600.001528
N126N126NaaCaaT4242AY.1200.001562
N126N126KaaCaaA3642AY.430.000159
N126N126KaaCaaG642AY.430.000027
N126N126NaaCaaT3737B.1.6050.220238
N126N126NaaCaaT3636AY.116.10.011211
N126N126NaaCaaT3535AY.4.2.10.005215
N126N126TaAcaCc3333All0.000006
N126N126NaaCaaT3131AY.90.002095
N126N126NaaCaaT3030AY.3.10.002558
N126N126YAacTac2929All0.000006
N126N126NaaCaaT2828AY.39.10.001109
N126N126NaaCaaT2828B.1.5250.003168
N126N126SaAcaGc2626AY.40.00004
N126N126NaaCaaT2626B.1.5770.017869
N126N126NaaCaaT2525Q.80.004123
N126N126NaaCaaT2424B.1.3510.000713
N126N126NaaCaaT2323AY.1020.00061
N126N126NaaCaaT2323B.1.2580.001531
N126N126DAacGac2022All0.000004
N126N126DAaCGaT222All0
N126N126NaaCaaT2222AY.290.000347
N126N126NaaCaaT2222B.1.5960.001917
N126N126NaaCaaT2222C.360.020036
N126N126NaaCaaT2121AY.470.000653
N126N126NaaCaaT2121B.1.1.3710.21875
N126N126NaaCaaT2020B.1.1.1530.021906
N126N126NaaCaaT1818B.1.4700.025281
N126N126NaaCaaT1717AY.1000.000782
N126N126NaaCaaT1717AY.420.000684
N126N126NaaCaaT1717B.1.5820.008342
N126N126KaaCaaG1217B.1.617.20.000045
N126N126KaaCaaA517B.1.617.20.000019
N126N126IaAcaTc1516All0.000003
N126N126IaACaTT116All0
N126N126NaaCaaT1616B.1.1.3170.006587
N126N126KaaCaaA1616B.1.2930.2
N126N126NaaCaaT1414AY.200.000544
N126N126NaaCaaT1414AY.410.004115
N126N126NaaCaaT1414AY.60.000576
N126N126NaaCaaT1414B.1.2340.001847
N126N126NaaCaaT1414B.1.5260.000329
N126N126NaaCaaT1414B.1.6280.004933
N126N126NaaCaaT1313AY.230.000907
N126N126NaaCaaT1313B0.001662
N126N126NaaCaaT1313B.1.177.40.002744
N126N126NaaCaaT1313B.1.2100.027719
N126N126NaaCaaT1313C.370.001509
N126N126NaaCaaT1313D.20.000976
N126N126NaaCaaT1212AY.260.00034
N126N126KaaCaaA1212AY.30.000119
N126N126KaaCaaA1212B.1.1.2140.000665
N126N126NaaCaaT1212B.1.177.820.005728
N126N126NaaCaaT1111AY.390.000272
N126N126NaaCaaT1111AY.4.50.001182
N126N126KaaCaaA1111AY.440.000067
N126N126NaaCaaT1111AY.5.30.003711
N126N126NaaCaaT1111P.20.002053
N126N126SaAcaGc1010AY.1190.000353
N126N126NaaCaaT1010AY.1210.001353
N126N126NaaCaaT1010AY.50.000206
N126N126NaaCaaT1010AY.610.001048
N126N126NaaCaaT1010AY.99.20.000922
N126N126NaaCaaT1010B.1.1.2140.000555
N126N126NaaCaaT99AY.300.003562
N126N126NaaCaaT99B.1.1.2220.001836
N126N126YAacTac99B.1.1.70.000008
N126N126NaaCaaT99B.1.177.430.013294
N126N126NaaCaaT99B.1.3690.002567
N126N126delAAC---88All0.000002
N126N126TaAcaCc88AY.1000.000368
N126N126KaaCaaA58AY.40.000008
N126N126KaaCaaG38AY.40.000005
N126N126NaaCaaT88AY.540.000763
N126N126NaaCaaT88AY.690.001493
N126N126TaAcaCc88B.1.1600.00025
N126N126KaaCaaA77AY.1160.002007
N126N126NaaCaaT77AY.340.000679
N126N126NaaCaaT77AY.4.20.000152
N126N126KaaCaaA67B.1.1.70.000005
N126N126KaaCaaG17B.1.1.70.000001
N126N126NaaCaaT77B.1.1.700.002387
N126N126NaaCaaT77B.1.160.320.030043
N126N126NaaCaaT77B.1.36.10.007982
N126N126NaaCaaT77B.1.6200.006623
N126N126NaaCaaT77R.10.00063
N126N126NaaCaaT66A.210.01662
N126N126NaaCaaT66AY.1130.000854
N126N126NaaCaaT66AY.1160.001721
N126N126NaaCaaT66AY.1190.000212
N126N126NaaCaaT66AY.120.10.001926
N126N126KaaCaaA56AY.250.00003
N126N126KaaCaaG16AY.250.000006
N126N126NaaCaaT66AY.710.00285
N126N126TaAcaCc66AY.830.010345
N126N126NaaCaaT66B.1.1.3180.001811
N126N126NaaCaaT66B.1.1.4100.222222
N126N126DAacGac66B.1.1.70.000005
N126N126SaAcaGc66B.1.1.710.036364
N126N126NaaCaaT66B.1.6370.000438
N126N126KaaCaaA66P.10.000095
N126N126IaAcaTc55AY.1030.000031
N126N126NaaCaaT55AY.1100.000563
N126N126NaaCaaT55AY.160.001898
N126N126NaaCaaT55AY.450.000608
N126N126NaaCaaT55AY.570.003281
N126N126NaaCaaT55B.1.1.4480.010163
N126N126TaAcaCc55B.1.1.70.000004
N126N126NaaCaaT55B.1.177.400.025773
N126N126KaaCaaA45B.1.20.000035
N126N126KaaCaaG15B.1.20.000009
N126N126NaaCaaT55B.1.258.170.00052
N126N126NaaCaaT55B.1.5750.001517
N126N126NaaCaaT55P.1.150.001162
N126N126NaaCaaT55Q.10.000632
N126N126SAAcTCc440.222222
N126N126IaAcaTc440.222222
N126N126TaAcaCc440.222222
N126N126SaAcaGc44AY.1020.000106
N126N126NaaCaaT44AY.1060.00134
N126N126NaaCaaT44AY.750.000224
N126N126DAaCGaT24B.10.000018
N126N126DAacGac24B.10.000018
N126N126YAacTac44B.1.10.000073
N126N126SaAcaGc44B.1.1770.000053
N126N126NaaCaaT44B.1.177.280.02963
N126N126NaaCaaT44P.1.140.000191
N126N126NaaCaaT33A0.001161
N126N126NaaCaaT33AY.1110.000549
N126N126NaaCaaT33AY.240.001293
N126N126NaaCaaT33AY.330.0002
N126N126KaaCaaA33AY.570.001969
N126N126NaaCaaT33AY.650.001599
N126N126NaaCaaT33AY.75.10.000541
N126N126IaAcaTc33B.10.000027
N126N126YAacTac33B.1.1.1330.025424
N126N126NaaCaaT33B.1.1.1980.004405
N126N126NaaCaaT33B.1.1.3060.001315
N126N126NaaCaaT33B.1.1.4110.044118
N126N126NaaCaaT33B.1.177.440.001557
N126N126NaaCaaT33B.1.177.500.014085
N126N126NaaCaaT33B.1.177.620.003576
N126N126NaaCaaT33B.1.177.720.010169
N126N126NaaCaaT33B.1.177.730.001699
N126N126NaaCaaT33B.1.177.830.004444
N126N126SaAcaGc33B.1.20.000026
N126N126NaaCaaT33B.1.2320.001612
N126N126NaaCaaT33B.1.3110.000824
N126N126KaaCaaA33B.1.36.310.005254
N126N126KaaCaaA33B.1.36.80.003
N126N126NaaCaaT33B.1.3750.002459
N126N126NaaCaaT33B.1.438.10.000322
N126N126NaaCaaT33B.1.5170.001281
N126N126KaaCaaA33B.1.5260.000071
N126N126SaAcaGc33B.1.617.20.000011
N126N126NaaCaaT33B.1.6210.000266
N126N126NaaCaaT33C.36.30.001702
N126N126VAAcGTc220.111111
N126N126DAacGac220.111111
N126N126KaaCaaG220.111111
N126N126YAacTac220.111111
N126N126FAAcTTc220.111111
N126N126AAAcGCc220.111111
N126N126NaaCaaT22A.280.005291
N126N126del1aaCaa-22All0
N126N126FAAcTTc22All0
N126N126VAAcGTc22All0
N126N126AAAcGCc22All0
N126N126NaaCaaT22AY.1050.001286
N126N126NaaCaaT22AY.1090.001479
N126N126NaaCaaT22AY.1170.000169
N126N126NaaCaaT22AY.16.10.00094
N126N126YAacTac22AY.230.000139
N126N126KaaCaaA22AY.260.000057
N126N126NaaCaaT22AY.360.000296
N126N126NaaCaaT22AY.370.000632
N126N126KaaCaaA22AY.4.20.000043
N126N126SaAcaGc22AY.420.00008
N126N126NaaCaaT22AY.46.40.000329
N126N126KaaCaaA22AY.50.000041
N126N126NaaCaaT22AY.680.000547
N126N126NaaCaaT22AY.890.009804
N126N126NaaCaaT22AY.990.002099
N126N126SaAcaGc22B.1.10.000036
N126N126KaaCaaA22B.1.10.000036
N126N126NaaCaaT22B.1.1.10.000653
N126N126NaaCaaT22B.1.1.1610.007067
N126N126NaaCaaT22B.1.1.1890.003026
N126N126NaaCaaT22B.1.1.2940.002532
N126N126NaaCaaT22B.1.1.340.026316
N126N126NaaCaaT22B.1.1110.00235
N126N126NaaCaaT22B.1.177.210.000153
N126N126NaaCaaT22B.1.177.530.004785
N126N126NaaCaaT22B.1.2050.047619
N126N126NaaCaaT22B.1.3400.008584
N126N126NaaCaaT22B.1.360.000292
N126N126NaaCaaT22B.1.36.290.001035
N126N126NaaCaaT22B.1.36.360.001204
N126N126NaaCaaT22B.1.3610.002577
N126N126NaaCaaT22B.1.466.20.000782
N126N126KaaCaaA22B.1.5390.035088
N126N126NaaCaaT22B.1.5510.002581
N126N126NaaCaaT22B.1.5600.009259
N126N126NaaCaaT22B.1.5680.002222
N126N126NaaCaaT22B.1.5760.001813
N126N126NaaCaaT22B.1.5860.021978
N126N126NaaCaaT22B.1.5950.000522
N126N126NaaCaaT22B.1.6090.000959
N126N126NaaCaaT22B.400.000729
N126N126NaaCaaT22B.60.00182
N126N126IaAcaTc12D.20.000075
N126N126IaACaTT12D.20.000075
N126N126KaaCaaA22P.1.140.000096
N126N126NaaCaaT22P.1.170.000324
N126N126DAacGac22Q.10.000253
N126N126KaaCaaA11A.2.40.003367
N126N126NaaCaaT11A.2.50.000499
N126N126NaaCaaT11A.23.10.000704
N126N126del1aaCaa-11A.23.10.000704
N126N126HAacCac11All0
N126N126PAAcCCc11All0
N126N126MaACaTG11All0
N126N126NaaCaaT11AU.10.001266
N126N126NaaCaaT11AU.20.002421
N126N126NaaCaaT11AY.10.000396
N126N126YAacTac11AY.1000.000046
N126N126KaaCaaG11AY.1030.000006
N126N126SaAcaGc11AY.1030.000006
N126N126NaaCaaT11AY.1070.000466
N126N126YAacTac11AY.1100.000113
N126N126SaAcaGc11AY.1170.000085
N126N126NaaCaaT11AY.120.000316
N126N126IaAcaTc11AY.120.10.000321
N126N126NaaCaaT11AY.120.20.001285
N126N126NaaCaaT11AY.130.000161
N126N126NaaCaaT11AY.20.000356
N126N126TaAcaCc11AY.250.000006
N126N126NaaCaaT11AY.270.000065
N126N126SaAcaGc11AY.290.000016
N126N126NaaCaaT11AY.29.10.000221
N126N126SaAcaGc11AY.30.00001
N126N126delAAC---11AY.30.00001
N126N126DAacGac11AY.30.00001
N126N126NaaCaaT11AY.320.000532
N126N126KaaCaaA11AY.340.000097
N126N126NaaCaaT11AY.34.10.00051
N126N126IaAcaTc11AY.39.10.00004
N126N126YAacTac11AY.40.000002
N126N126DAacGac11AY.40.000002
N126N126NaaCaaT11AY.4.40.000409
N126N126KaaCaaA11AY.410.000294
N126N126delAAC---11AY.420.00004
N126N126YAacTac11AY.430.000004
N126N126SaAcaGc11AY.440.000006
N126N126DAacGac11AY.440.000006
N126N126NaaCaaT11AY.460.000104
N126N126NaaCaaT11AY.46.30.000934
N126N126NaaCaaT11AY.46.60.000072
N126N126DAacGac11AY.470.000031
N126N126NaaCaaT11AY.480.000465
N126N126KaaCaaA11AY.540.000095
N126N126NaaCaaT11AY.550.000917
N126N126NaaCaaT11AY.580.000907
N126N126NaaCaaT11AY.590.00053
N126N126NaaCaaT11AY.630.000387
N126N126NaaCaaT11AY.640.000595
N126N126NaaCaaT11AY.670.000464
N126N126delAAC---11AY.670.000464
N126N126SaAcaGc11AY.7.20.000559
N126N126NaaCaaT11AY.7.20.000559
N126N126NaaCaaT11AY.700.000209
N126N126NaaCaaT11AY.740.000116
N126N126KaaCaaA11AY.750.000056
N126N126KaaCaaG11AY.860.00083
N126N126NaaCaaT11AY.910.00073
N126N126NaaCaaT11AY.980.000079
N126N126NaaCaaT11AZ.20.000821
N126N126HAacCac11B.10.000009
N126N126PAAcCCc11B.10.000009
N126N126SaAcaGc11B.10.000009
N126N126YAacTac11B.10.000009
N126N126DAacGac11B.1.10.000018
N126N126NaaCaaT11B.1.1.1570.000913
N126N126KaaCaaA11B.1.1.1590.004673
N126N126KaaCaaA11B.1.1.1610.003534
N126N126NaaCaaT11B.1.1.1620.029412
N126N126NaaCaaT11B.1.1.1630.007634
N126N126NaaCaaT11B.1.1.1700.001247
N126N126NaaCaaT11B.1.1.2000.007463
N126N126KaaCaaA11B.1.1.2010.02439
N126N126KaaCaaA11B.1.1.2220.000204
N126N126NaaCaaT11B.1.1.2510.007937
N126N126NaaCaaT11B.1.1.2860.002899
N126N126NaaCaaT11B.1.1.3160.000925
N126N126NaaCaaT11B.1.1.3260.001761
N126N126NaaCaaT11B.1.1.330.000421
N126N126NaaCaaT11B.1.1.3320.03125
N126N126NaaCaaT11B.1.1.3330.001076
N126N126NaaCaaT11B.1.1.3370.003597
N126N126NaaCaaT11B.1.1.3480.000796
N126N126NaaCaaT11B.1.1.3510.002793
N126N126NaaCaaT11B.1.1.3720.000689
N126N126NaaCaaT11B.1.1.3760.005952
N126N126YAacTac11B.1.1.3790.03125
N126N126NaaCaaT11B.1.1.390.00051
N126N126delAAC---11B.1.1.4200.001006
N126N126NaaCaaT11B.1.1.440.00241
N126N126NaaCaaT11B.1.1.4400.011765
N126N126NaaCaaT11B.1.1.4640.001473
N126N126NaaCaaT11B.1.1.470.005348
N126N126YAacTac11B.1.1.500.000679
N126N126NaaCaaT11B.1.1.5150.02
N126N126YAacTac11B.1.1.5190.00004
N126N126KaaCaaA11B.1.1.5190.00004
N126N126NaaCaaT11B.1.1.580.005376
N126N126NaaCaaT11B.1.1.630.000386
N126N126delAAC---11B.1.1.70.000001
N126N126KaaCaaA11B.1.1.700.000341
N126N126NaaCaaT11B.1.1.830.00271
N126N126NaaCaaT11B.1.160.100.008065
N126N126NaaCaaT11B.1.160.160.000929
N126N126NaaCaaT11B.1.160.250.011111
N126N126KaaCaaA11B.1.1770.000013
N126N126NaaCaaT11B.1.177.150.000631
N126N126DAacGac11B.1.177.210.000076
N126N126NaaCaaT11B.1.177.520.001757
N126N126NaaCaaT11B.1.177.570.000281
N126N126NaaCaaT11B.1.177.60.000977
N126N126delAAC---11B.1.177.630.002703
N126N126NaaCaaT11B.1.177.70.000165
N126N126delAAC---11B.1.177.830.001481
N126N126NaaCaaT11B.1.177.860.000183
N126N126DAacGac11B.1.177.860.000183
N126N126KaaCaaA11B.1.2100.002132
N126N126NaaCaaT11B.1.2230.002778
N126N126NaaCaaT11B.1.2360.002053
N126N126NaaCaaT11B.1.2400.000216
N126N126KaaCaaA11B.1.2410.000812
N126N126SaAcaGc11B.1.2410.000812
N126N126NaaCaaT11B.1.243.10.022222
N126N126NaaCaaT11B.1.258.140.00098
N126N126NaaCaaT11B.1.258.50.008772
N126N126NaaCaaT11B.1.3080.034483
N126N126KaaCaaG11B.1.3110.000275
N126N126NaaCaaT11B.1.351.30.000876
N126N126SaAcaGc11B.1.360.000146
N126N126NaaCaaT11B.1.36.170.000494
N126N126KaaCaaA11B.1.36.170.000494
N126N126KaaCaaA11B.1.36.260.002857
N126N126KaaCaaA11B.1.36.360.000602
N126N126KaaCaaA11B.1.3670.000792
N126N126NaaCaaT11B.1.3800.006623
N126N126NaaCaaT11B.1.400.10.015152
N126N126NaaCaaT11B.1.4160.001269
N126N126delAAC---11B.1.4270.00005
N126N126NaaCaaT11B.1.4280.00102
N126N126KaaCaaG11B.1.4290.000024
N126N126NaaCaaT11B.1.440.008333
N126N126NaaCaaT11B.1.4410.009615
N126N126NaaCaaT11B.1.466.10.007194
N126N126KaaCaaA11B.1.466.20.000391
N126N126NaaCaaT11B.1.4750.142857
N126N126NaaCaaT11B.1.4990.00105
N126N126KaaCaaA11B.1.5000.052632
N126N126SaAcaGc11B.1.5230.002451
N126N126NaaCaaT11B.1.5240.001406
N126N126NaaCaaT11B.1.5380.008065
N126N126NaaCaaT11B.1.5610.000397
N126N126NaaCaaT11B.1.5640.000426
N126N126NaaCaaT11B.1.5650.00081
N126N126NaaCaaT11B.1.5740.002151
N126N126NaaCaaT11B.1.575.10.002439
N126N126SaAcaGc11B.1.5760.000907
N126N126del1aaCaa-11B.1.5960.000087
N126N126NaaCaaT11B.1.5970.00463
N126N126NaaCaaT11B.1.5990.00365
N126N126NaaCaaT11B.1.6060.006024
N126N126NaaCaaT11B.1.617.10.000129
N126N126TaAcaCc11B.1.617.20.000004
N126N126YAacTac11B.1.617.20.000004
N126N126DAacGac11B.1.617.20.000004
N126N126SaAcaGc11B.1.6210.000089
N126N126NaaCaaT11B.1.621.10.000506
N126N126SaAcaGc11B.1.621.10.000506
N126N126NaaCaaT11B.1.940.027027
N126N126NaaCaaT11B.30.000831
N126N126NaaCaaT11B.310.003731
N126N126NaaCaaT11C.160.00106
N126N126NaaCaaT11C.350.000774
N126N126MaACaTG11P.10.000016
N126N126NaaCaaT11P.70.004367
N126N126NaaCaaT11Q.30.000145