CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = M : Mut = R44S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
M44R44SnonsynagGagT4934900.99391526652-26654
M44R44SnonsynagGagC49330.0060851926652-26654

Details of the mutation R44S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
M44R44SagGagT490493All0.000094
M44R44SagGagC3493All0.000001
M44R44SagGagT188188B.1.517.10.989474
M44R44SagGagT126126B.1.5170.0538
M44R44SagGagT4243B.1.1.70.000038
M44R44SagGagC143B.1.1.70.000001
M44R44SagGagT2626AY.39.10.00103
M44R44SagGagT1212B.10.00011
M44R44SagGagT99B.1.1770.000119
M44R44SagGagT77B.1.20.000062
M44R44SagGagT77B.1.617.20.000026
M44R44SagGagT55AY.40.000008
M44R44SagGagT55B.1.10.000091
M44R44SagGagT55D.20.000375
M44R44SagGagT44AY.1030.000025
M44R44SagGagT44B.1.1600.000125
M44R44SagGagT33B0.000383
M44R44SagGagT33B.1.177.210.000229
M44R44SagGagT33B.1.4290.000071
M44R44SagGagC220.111111
M44R44SagGagT22AY.250.000012
M44R44SagGagT22AY.30.00002
M44R44SagGagT22AY.390.000049
M44R44SagGagT22AY.430.000009
M44R44SagGagT22AY.440.000012
M44R44SagGagT22AY.470.000062
M44R44SagGagT22P.10.000032
M44R44SagGagT11AY.1020.000027
M44R44SagGagT11AY.200.000039
M44R44SagGagT11AY.260.000028
M44R44SagGagT11AY.29.10.000221
M44R44SagGagT11AY.4.50.000107
M44R44SagGagT11AY.46.20.000635
M44R44SagGagT11AY.680.000274
M44R44SagGagT11AY.75.10.00018
M44R44SagGagT11AY.90.000068
M44R44SagGagT11AY.9.20.000037
M44R44SagGagT11B.1.1.2770.000759
M44R44SagGagT11B.1.1.4090.002833
M44R44SagGagT11B.1.1040.00369
M44R44SagGagT11B.1.160.160.000929
M44R44SagGagT11B.1.177.560.000668
M44R44SagGagT11B.1.177.600.000218
M44R44SagGagT11B.1.2340.000132
M44R44SagGagT11B.1.36.180.00042
M44R44SagGagT11B.1.36.390.002217
M44R44SagGagT11B.1.3670.000792
M44R44SagGagT11B.1.3960.000706
M44R44SagGagT11B.1.5770.000687
M44R44SagGagT11B.1.760.011364
M44R44SagGagT11B.310.003731
M44R44SagGagT11C.370.000116
M44R44SagGagT11P.1.150.000232
M44R44SagGagT11P.20.000187