CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = M : Mut = L87L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
M87L87LsynctTctC2782060.74100726781-26783
M87L87LsynctTctA278670.24100726781-26783
M87L87LsynctTctG27850.017985626781-26783

Details of the mutation L87L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
M87L87LctTctC206278All0.000039
M87L87LctTctA67278All0.000013
M87L87LctTctG5278All0.000001
M87L87LctTctA4445B.1.1.3430.916667
M87L87LctTctC145B.1.1.3430.020833
M87L87LctTctC3737B.1.1600.001154
M87L87LctTctC3434AY.30.000338
M87L87LctTctA1020B.1.1.70.000009
M87L87LctTctC820B.1.1.70.000007
M87L87LctTctG220B.1.1.70.000002
M87L87LctTctC1719AY.40.000026
M87L87LctTctA119AY.40.000002
M87L87LctTctG119AY.40.000002
M87L87LctTctC1212B.1.1770.000158
M87L87LctTctC812B.1.20.00007
M87L87LctTctA412B.1.20.000035
M87L87LctTctC1111C.160.011665
M87L87LctTctC77AY.430.000031
M87L87LctTctC67B.1.617.20.000023
M87L87LctTctA17B.1.617.20.000004
M87L87LctTctC66AY.440.000037
M87L87LctTctC55AY.200.000194
M87L87LctTctC44AY.1030.000025
M87L87LctTctC44B.10.000037
M87L87LctTctC33AY.1170.000254
M87L87LctTctC33AY.460.000312
M87L87LctTctC33B.1.2320.001612
M87L87LctTctC33B.1.4000.001287
M87L87LctTctC33P.10.000047
M87L87LctTctC12A.2.50.000499
M87L87LctTctA12A.2.50.000499
M87L87LctTctC22AY.1190.000071
M87L87LctTctC22AY.270.000129
M87L87LctTctG12AY.330.000067
M87L87LctTctC12AY.330.000067
M87L87LctTctA12AY.60.000041
M87L87LctTctC12AY.60.000041
M87L87LctTctC22AY.98.10.000097
M87L87LctTctC22B.1.177.600.000437
M87L87LctTctC22B.1.6210.000177
M87L87LctTctC22C.370.000232
M87L87LctTctA22P.20.000373
M87L87LctTctC11A.10.000282
M87L87LctTctC11A.20.000662
M87L87LctTctA11A.23.10.000704
M87L87LctTctC11AY.1020.000027
M87L87LctTctC11AY.1210.000135
M87L87LctTctC11AY.240.000431
M87L87LctTctC11AY.250.000006
M87L87LctTctC11AY.290.000016
M87L87LctTctC11AY.39.10.00004
M87L87LctTctC11AY.4.20.000022
M87L87LctTctC11AY.690.000187
M87L87LctTctG11B.1.1.2290.005747
M87L87LctTctA11B.1.1.390.00051
M87L87LctTctC11B.1.1.700.000341
M87L87LctTctC11B.1.3750.00082
M87L87LctTctA11B.1.4270.00005
M87L87LctTctC11B.1.5960.000087
M87L87LctTctC11B.400.000364
M87L87LctTctC11D.20.000075
M87L87LctTctC11P.1.120.000484