CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = M : Mut = L51L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
M51L51LsynTtaCta3172310.72870726673-26675
M51L51LsynttAttG317810.2555226673-26675
M51L51LsynTtACtT31750.015772926673-26675

Details of the mutation L51L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
M51L51LTtaCta231317All0.000044
M51L51LttAttG81317All0.000015
M51L51LTtACtT5317All0.000001
M51L51LTtaCta171176B.1.1.70.000153
M51L51LttAttG5176B.1.1.70.000004
M51L51LTtaCta1717B.1.6330.708333
M51L51LttAttG1515AY.440.000091
M51L51LttAttG1313A.23.10.009155
M51L51LttAttG812B.10.000073
M51L51LTtaCta412B.10.000037
M51L51LTtACtT4100.222222
M51L51LTtaCta4100.222222
M51L51LttAttG2100.111111
M51L51LttAttG910AY.30.00009
M51L51LTtaCta110AY.30.00001
M51L51LTtaCta88B.1.1600.00025
M51L51LTtaCta47AY.40.000006
M51L51LttAttG37AY.40.000005
M51L51LTtaCta44AY.260.000113
M51L51LTtaCta44AY.4.20.000087
M51L51LttAttG44B.1.20.000035
M51L51LttAttG33AY.750.000168
M51L51LTtaCta33B.1.6230.001609
M51L51LttAttG22B.1.177.210.000153
M51L51LttAttG22B.1.617.20.000008
M51L51LttAttG22P.1.150.000465
M51L51LTtaCta22Q.30.00029
M51L51LttAttG11A0.000387
M51L51LTtaCta11AY.1180.000063
M51L51LttAttG11AY.130.000161
M51L51LttAttG11AY.230.00007
M51L51LttAttG11AY.390.000025
M51L51LTtaCta11AY.39.10.00004
M51L51LTtaCta11AY.420.00004
M51L51LttAttG11AY.430.000004
M51L51LTtaCta11AY.470.000031
M51L51LttAttG11AY.710.000475
M51L51LTtaCta11AY.780.001541
M51L51LttAttG11AY.90.000068
M51L51LTtaCta11B.1.10.000018
M51L51LttAttG11B.1.1.3720.000689
M51L51LTtaCta11B.1.1.5190.00004
M51L51LttAttG11B.1.1.5230.001563
M51L51LttAttG11B.1.1.700.000341
M51L51LTtaCta11B.1.177.190.001431
M51L51LttAttG11B.1.2430.00007
M51L51LTtACtT11B.1.3320.003497
M51L51LTtaCta11B.1.4620.007246
M51L51LttAttG11C.370.000116
M51L51LttAttG11Q.10.000126