CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = M : Mut = L29L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
M29L29LsynctTctC267126640.99737926607-26609
M29L29LsynctTctA267160.0022463526607-26609
M29L29LsynctTctG267110.00037439226607-26609

Details of the mutation L29L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
M29L29LctTctC26642671All0.00051
M29L29LctTctA62671All0.000001
M29L29LctTctG12671All0
M29L29LctTctC16491650B.1.1770.021713
M29L29LctTctA11650B.1.1770.000013
M29L29LctTctC490492AY.40.000763
M29L29LctTctA2492AY.40.000003
M29L29LctTctC143143B.1.1.70.000128
M29L29LctTctC7878B.10.000714
M29L29LctTctC5051B.1.617.20.000188
M29L29LctTctA151B.1.617.20.000004
M29L29LctTctC1212AY.1030.000075
M29L29LctTctC1212AY.430.000053
M29L29LctTctC1111B.1.10.0002
M29L29LctTctC1111B.1.1600.000343
M29L29LctTctC1111B.1.5610.004367
M29L29LctTctC1010P.1.140.000478
M29L29LctTctC99B.1.20.000079
M29L29LctTctC99C.370.001045
M29L29LctTctC88B.1.177.600.001747
M29L29LctTctC88B.1.2580.000532
M29L29LctTctC77B.1.1.3060.003069
M29L29LctTctC77B.1.258.170.000728
M29L29LctTctC66AY.240.002586
M29L29LctTctC66AY.250.000036
M29L29LctTctC66AY.30.00006
M29L29LctTctC66B.1.1.700.002046
M29L29LctTctC55AY.470.000156
M29L29LctTctC44AY.200.000155
M29L29LctTctC44AY.390.000099
M29L29LctTctC34AY.440.000018
M29L29LctTctA14AY.440.000006
M29L29LctTctC44B.1.1.250.002274
M29L29LctTctC44B.1.1.5190.000159
M29L29LctTctC44B.1.177.150.002524
M29L29LctTctC44B.1.177.860.000734
M29L29LctTctC33AD.20.000657
M29L29LctTctC33AY.50.000062
M29L29LctTctC33AY.60.000123
M29L29LctTctC33B.1.177.730.001699
M29L29LctTctC33B.1.2210.000213
M29L29LctTctC33B.1.258.110.001189
M29L29LctTctC33P.10.000047
M29L29LctTctC33P.30.004785
M29L29LctTctC33R.10.00027
M29L29LctTctC22AY.1020.000053
M29L29LctTctC22AY.290.000032
M29L29LctTctA12AY.3.10.000085
M29L29LctTctC12AY.3.10.000085
M29L29LctTctC22AY.580.001815
M29L29LctTctC22AY.610.00021
M29L29LctTctC22AY.620.000871
M29L29LctTctC22AY.9.10.000167
M29L29LctTctC22AY.98.10.000097
M29L29LctTctC22B.1.177.570.000562
M29L29LctTctC22B.1.3190.006098
M29L29LctTctC22B.1.3960.001411
M29L29LctTctC22B.1.4060.012121
M29L29LctTctC22B.1.5960.000174
M29L29LctTctC11A.2.50.000499
M29L29LctTctC11AY.1130.000142
M29L29LctTctC11AY.116.10.000311
M29L29LctTctC11AY.120.000316
M29L29LctTctC11AY.1200.000037
M29L29LctTctC11AY.260.000028
M29L29LctTctC11AY.360.000148
M29L29LctTctC11AY.39.10.00004
M29L29LctTctC11AY.750.000056
M29L29LctTctC11AY.90.000068
M29L29LctTctC11AY.980.000079
M29L29LctTctC11B.1.1.2140.000055
M29L29LctTctC11B.1.1.2400.004695
M29L29LctTctC11B.1.1.3720.000689
M29L29LctTctC11B.1.1150.021739
M29L29LctTctC11B.1.177.310.011494
M29L29LctTctC11B.1.177.690.001484
M29L29LctTctC11B.1.177.770.000726
M29L29LctTctC11B.1.2220.001692
M29L29LctTctC11B.1.2390.001221
M29L29LctTctC11B.1.3060.005714
M29L29LctTctC11B.1.3110.000275
M29L29LctTctC11B.1.3400.004292
M29L29LctTctC11B.1.3510.00003
M29L29LctTctC11B.1.36.290.000517
M29L29LctTctC11B.1.3620.001541
M29L29LctTctG11B.1.4970.000315
M29L29LctTctC11B.1.6370.000073
M29L29LctTctC11C.40.01
M29L29LctTctC11N.30.005814
M29L29LctTctC11P.1.40.000977
M29L29LctTctC11Q.80.000165