CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = M : Mut = L17L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
M17L17LsynctTctC5094310.84675826571-26573
M17L17LsynctTctA509730.14341826571-26573
M17L17LsynctTctG50930.0058939126571-26573
M17L17LsynCtTTtG50910.0019646426571-26573
M17L17LsynCtTTtA50910.0019646426571-26573

Details of the mutation L17L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
M17L17LctTctC431509All0.000082
M17L17LctTctA73509All0.000014
M17L17LctTctG3509All0.000001
M17L17LCtTTtA1509All0
M17L17LCtTTtG1509All0
M17L17LctTctC164164AY.40.000255
M17L17LctTctC6873B.1.1.70.000061
M17L17LctTctA473B.1.1.70.000004
M17L17LCtTTtG173B.1.1.70.000001
M17L17LctTctA4951AY.330.003272
M17L17LctTctC251AY.330.000134
M17L17LctTctC5151AY.430.000226
M17L17LctTctC3737B.1.617.20.000139
M17L17LctTctC1313AY.1020.000345
M17L17LctTctC1011AY.30.000099
M17L17LctTctA111AY.30.00001
M17L17LctTctA1010B.1.4270.000505
M17L17LctTctC67AY.440.000037
M17L17LctTctG17AY.440.000006
M17L17LctTctC66B.10.000055
M17L17LctTctC66B.1.177.50.007453
M17L17LctTctC66P.10.000095
M17L17LctTctC44AY.1030.000025
M17L17LctTctC44AY.250.000024
M17L17LctTctC44AY.420.000161
M17L17LctTctC24B.1.10.000036
M17L17LCtTTtA14B.1.10.000018
M17L17LctTctA14B.1.10.000018
M17L17LctTctC44B.1.5160.007828
M17L17LctTctC23AY.260.000057
M17L17LctTctA13AY.260.000028
M17L17LctTctA33B.1.1.1890.004539
M17L17LctTctC33B.1.438.10.000322
M17L17LctTctC22AY.1170.000169
M17L17LctTctC22AY.390.000049
M17L17LctTctC22AY.910.001461
M17L17LctTctC22B.1.2340.000264
M17L17LctTctC22B.1.5260.000047
M17L17LctTctA12C.370.000116
M17L17LctTctG12C.370.000116
M17L17LctTctC11A.10.000282
M17L17LctTctC11AY.1130.000142
M17L17LctTctC11AY.1160.000287
M17L17LctTctC11AY.116.10.000311
M17L17LctTctC11AY.1210.000135
M17L17LctTctC11AY.34.10.00051
M17L17LctTctA11AY.590.00053
M17L17LctTctC11AY.670.000464
M17L17LctTctC11AY.740.000116
M17L17LctTctC11AY.840.000437
M17L17LctTctA11AY.870.000833
M17L17LctTctC11AY.9.20.000037
M17L17LctTctC11AY.980.000079
M17L17LctTctC11AY.98.10.000048
M17L17LctTctC11AY.990.001049
M17L17LctTctC11B.1.1.2630.001558
M17L17LctTctC11B.1.1.4640.001473
M17L17LctTctC11B.1.177.530.002392
M17L17LctTctC11B.1.177.810.000189
M17L17LctTctC11B.1.2060.000816
M17L17LctTctC11B.1.2400.000216
M17L17LctTctC11B.1.2580.000067
M17L17LctTctC11B.1.258.170.000104
M17L17LctTctG11B.1.3380.008621
M17L17LctTctC11B.1.3510.00003
M17L17LctTctC11B.1.36.170.000494
M17L17LctTctC11B.1.5510.00129
M17L17LctTctC11B.1.5640.000426
M17L17LctTctA11B.1.6090.000479
M17L17LctTctC11D.20.000075
M17L17LctTctC11P.1.140.000048
M17L17LctTctC11P.1.17.10.000875
M17L17LctTctC11Q.10.000126