CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = M : Mut = L17F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
M17L17FnonsynCttTtt29362936126571-26573

Details of the mutation L17F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
M17L17FCttTtt29362936All0.000562
M17L17FCttTtt586586B.1.4290.013788
M17L17FCttTtt496496B.1.1.70.000444
M17L17FCttTtt255255AY.9.20.009366
M17L17FCttTtt135135AY.1030.000838
M17L17FCttTtt126126AY.40.000196
M17L17FCttTtt102102B.1.1770.001343
M17L17FCttTtt9393B.1.617.20.00035
M17L17FCttTtt9292B.1.20.00081
M17L17FCttTtt6868D.20.005103
M17L17FCttTtt5151B.10.000467
M17L17FCttTtt4949AY.50.001012
M17L17FCttTtt4646B.1.4600.821429
M17L17FCttTtt4545AY.440.000274
M17L17FCttTtt4444P.10.000693
M17L17FCttTtt3838AY.30.000378
M17L17FCttTtt3131AY.430.000137
M17L17FCttTtt3030AY.250.00018
M17L17FCttTtt2323AY.1000.001058
M17L17FCttTtt2121B.1.6210.001859
M17L17FCttTtt1818AY.470.00056
M17L17FCttTtt1717B.1.3510.000505
M17L17FCttTtt1616B.1.1.2840.001718
M17L17FCttTtt1616B.1.1.3160.014801
M17L17FCttTtt1515AY.290.000237
M17L17FCttTtt1414B.1.1.4320.017722
M17L17FCttTtt1414B.1.2400.003018
M17L17FCttTtt1313B.1.4270.000656
M17L17FCttTtt1313B.1.6370.00095
M17L17FCttTtt1212AY.270.000777
M17L17FCttTtt1212B.1.5260.000282
M17L17FCttTtt1212B.1.6190.010453
M17L17FCttTtt1212P.1.140.000574
M17L17FCttTtt1010AY.260.000283
M17L17FCttTtt1010B.1.10.000181
M17L17FCttTtt1010B.1.1.2140.000555
M17L17FCttTtt1010B.1.1600.000312
M17L17FCttTtt1010B.1.36.310.017513
M17L17FCttTtt1010R.10.0009
M17L17FCttTtt99AY.1020.000239
M17L17FCttTtt99AY.340.000873
M17L17FCttTtt99AY.390.000222
M17L17FCttTtt99B.1.1.280.002801
M17L17FCttTtt99B.1.2210.000639
M17L17FCttTtt99C.370.001045
M17L17FCttTtt88B.1.1.5190.000318
M17L17FCttTtt88B.1.2580.000532
M17L17FCttTtt88Q.80.001319
M17L17FCttTtt77AY.4.20.000152
M17L17FCttTtt77B.1.177.860.001284
M17L17FCttTtt77Q.10.000884
M17L17FCttTtt66AY.740.000694
M17L17FCttTtt66AY.750.000336
M17L17FCttTtt66B.1.1.2800.018519
M17L17FCttTtt66B.1.1460.025424
M17L17FCttTtt66B.1.177.40.001266
M17L17FCttTtt66B.1.2430.000418
M17L17FCttTtt66B.1.360.000875
M17L17FCttTtt55AY.46.50.000992
M17L17FCttTtt55AY.60.000206
M17L17FCttTtt55AY.98.10.000242
M17L17FCttTtt55B.1.1.250.002843
M17L17FCttTtt55B.1.2340.00066
M17L17FCttTtt55B.1.5820.002453
M17L17FCttTtt55P.1.170.000809
M17L17FCttTtt44AY.1160.001147
M17L17FCttTtt44AY.200.000155
M17L17FCttTtt44B.1.1080.023256
M17L17FCttTtt44B.1.177.120.000607
M17L17FCttTtt44B.1.3370.022346
M17L17FCttTtt33A.2.50.001497
M17L17FCttTtt33AY.1100.000338
M17L17FCttTtt33AY.230.000209
M17L17FCttTtt33AY.29.10.000662
M17L17FCttTtt33AY.39.10.000119
M17L17FCttTtt33AY.46.60.000217
M17L17FCttTtt33AY.540.000286
M17L17FCttTtt33AY.99.20.000276
M17L17FCttTtt33B.1.1.3700.037975
M17L17FCttTtt33B.1.1.3820.107143
M17L17FCttTtt33B.1.258.170.000312
M17L17FCttTtt33B.1.36.270.00229
M17L17FCttTtt33B.1.3630.038961
M17L17FCttTtt33B.1.438.10.000322
M17L17FCttTtt33B.1.5950.000783
M17L17FCttTtt33P.1.100.000808
M17L17FCttTtt33P.1.70.000958
M17L17FCttTtt33P.70.0131
M17L17FCttTtt22AY.1050.001286
M17L17FCttTtt22AY.1060.00067
M17L17FCttTtt22AY.1130.000285
M17L17FCttTtt22AY.1190.000071
M17L17FCttTtt22AY.160.000759
M17L17FCttTtt22AY.350.000466
M17L17FCttTtt22AY.4.50.000215
M17L17FCttTtt22AY.5.30.000675
M17L17FCttTtt22AY.5.40.000553
M17L17FCttTtt22B.1.1.3010.002358
M17L17FCttTtt22B.1.1.4480.004065
M17L17FCttTtt22B.1.1.4860.003155
M17L17FCttTtt22B.1.177.100.001756
M17L17FCttTtt22B.1.36.80.002
M17L17FCttTtt22B.1.5240.002813
M17L17FCttTtt22B.1.5610.000794
M17L17FCttTtt22B.1.5770.001375
M17L17FCttTtt22B.1.5960.000174
M17L17FCttTtt22C.10.004785
M17L17FCttTtt22C.350.001548
M17L17FCttTtt22P.1.150.000465
M17L17FCttTtt11A0.000387
M17L17FCttTtt11A.2.40.003367
M17L17FCttTtt11AD.20.000219
M17L17FCttTtt11AE.10.011364
M17L17FCttTtt11AY.1040.001984
M17L17FCttTtt11AY.1110.000183
M17L17FCttTtt11AY.1140.000231
M17L17FCttTtt11AY.1180.000063
M17L17FCttTtt11AY.140.000088
M17L17FCttTtt11AY.20.000356
M17L17FCttTtt11AY.370.000316
M17L17FCttTtt11AY.420.00004
M17L17FCttTtt11AY.450.000122
M17L17FCttTtt11AY.460.000104
M17L17FCttTtt11AY.550.000917
M17L17FCttTtt11AY.610.000105
M17L17FCttTtt11AY.630.000387
M17L17FCttTtt11AY.70.000196
M17L17FCttTtt11AY.7.20.000559
M17L17FCttTtt11AY.75.10.00018
M17L17FCttTtt11AY.820.001357
M17L17FCttTtt11AY.890.004902
M17L17FCttTtt11AY.90.000068
M17L17FCttTtt11B0.000128
M17L17FCttTtt11B.1.1.10.000327
M17L17FCttTtt11B.1.1.1920.002309
M17L17FCttTtt11B.1.1.2220.000204
M17L17FCttTtt11B.1.1.2660.012195
M17L17FCttTtt11B.1.1.3050.003861
M17L17FCttTtt11B.1.1.3110.000358
M17L17FCttTtt11B.1.1.3170.000412
M17L17FCttTtt11B.1.1.3380.017241
M17L17FCttTtt11B.1.1.370.000193
M17L17FCttTtt11B.1.1.400.034483
M17L17FCttTtt11B.1.1.4340.000349
M17L17FCttTtt11B.1.1.4470.035714
M17L17FCttTtt11B.1.1.4640.001473
M17L17FCttTtt11B.1.1.630.000386
M17L17FCttTtt11B.1.110.30.000718
M17L17FCttTtt11B.1.160.220.006757
M17L17FCttTtt11B.1.160.280.002924
M17L17FCttTtt11B.1.177.500.004695
M17L17FCttTtt11B.1.177.650.000665
M17L17FCttTtt11B.1.177.70.000165
M17L17FCttTtt11B.1.2100.002132
M17L17FCttTtt11B.1.214.20.0006
M17L17FCttTtt11B.1.2220.001692
M17L17FCttTtt11B.1.2370.004975
M17L17FCttTtt11B.1.3490.000715
M17L17FCttTtt11B.1.36.180.00042
M17L17FCttTtt11B.1.36.290.000517
M17L17FCttTtt11B.1.3770.004566
M17L17FCttTtt11B.1.3890.001002
M17L17FCttTtt11B.1.3960.000706
M17L17FCttTtt11B.1.3990.001934
M17L17FCttTtt11B.1.4000.000429
M17L17FCttTtt11B.1.4220.000812
M17L17FCttTtt11B.1.4260.001009
M17L17FCttTtt11B.1.4800.002488
M17L17FCttTtt11B.1.5090.000866
M17L17FCttTtt11B.1.5810.009434
M17L17FCttTtt11B.1.6120.002653
M17L17FCttTtt11B.1.88.10.004808
M17L17FCttTtt11B.30.000831
M17L17FCttTtt11B.400.000364
M17L17FCttTtt11C.160.00106
M17L17FCttTtt11P.1.160.000374
M17L17FCttTtt11Q.30.000145
M17L17FCttTtt11Q.40.000455