CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = M : Mut = H125S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
M125H125SnonsynCAtTCt48230.47916726895-26897
M125H125SnonsynCATTCG48100.20833326895-26897
M125H125SnonsynCATTCC4880.16666726895-26897
M125H125SnonsynCAtAGt4840.083333326895-26897
M125H125SnonsynCATAGC4820.041666726895-26897
M125H125SnonsynCATTCA4810.020833326895-26897

Details of the mutation H125S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
M125H125SCAtTCt2348All0.000004
M125H125SCATTCG1048All0.000002
M125H125SCATTCC848All0.000002
M125H125SCAtAGt448All0.000001
M125H125SCATAGC248All0
M125H125SCATTCA148All0
M125H125SCAtTCt1939B.1.1.70.000017
M125H125SCATTCG939B.1.1.70.000008
M125H125SCATTCC839B.1.1.70.000007
M125H125SCAtAGt239B.1.1.70.000002
M125H125SCATAGC139B.1.1.70.000001
M125H125SCAtTCt35B.10.000027
M125H125SCATTCG15B.10.000009
M125H125SCATTCA15B.10.000009
M125H125SCATAGC12AY.250.000006
M125H125SCAtAGt12AY.250.000006
M125H125SCAtTCt11AY.360.000148
M125H125SCAtAGt11B.1.3690.000285