CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = M : Mut = H125L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
M125H125LnonsyncAtcTt2101690.80476226895-26897
M125H125LnonsynCATTTG210200.095238126895-26897
M125H125LnonsyncATcTC210110.05238126895-26897
M125H125LnonsyncATcTG210100.04761926895-26897

Details of the mutation H125L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
M125H125LcAtcTt169210All0.000032
M125H125LCATTTG20210All0.000004
M125H125LcATcTC11210All0.000002
M125H125LcATcTG10210All0.000002
M125H125LcAtcTt5692B.1.1.70.00005
M125H125LCATTTG1992B.1.1.70.000017
M125H125LcATcTG992B.1.1.70.000008
M125H125LcATcTC892B.1.1.70.000007
M125H125LcAtcTt4848B.1.4290.001129
M125H125LcAtcTt1313AY.1030.000081
M125H125LcAtcTt88AY.40.000012
M125H125LcAtcTt88AY.50.000165
M125H125LcAtcTt66B.1.5260.000141
M125H125LcAtcTt35B.10.000027
M125H125LCATTTG15B.10.000009
M125H125LcATcTG15B.10.000009
M125H125LcAtcTt44AY.440.000024
M125H125LcAtcTt22AY.250.000012
M125H125LcATcTC12B.1.10.000018
M125H125LcAtcTt12B.1.10.000018
M125H125LcAtcTt22B.1.1.1610.007067
M125H125LcAtcTt22B.1.1770.000026
M125H125LcATcTC12B.1.5760.000907
M125H125LcAtcTt12B.1.5760.000907
M125H125LcAtcTt22B.1.617.20.000008
M125H125LcATcTC12P.10.000016
M125H125LcAtcTt12P.10.000016
M125H125LcAtcTt11A.2.20.001689
M125H125LcAtcTt11AY.1190.000035
M125H125LcAtcTt11AY.200.000039
M125H125LcAtcTt11AY.4.20.000022
M125H125LcAtcTt11AY.430.000004
M125H125LcAtcTt11AY.540.000095
M125H125LcAtcTt11B.1.1.2220.000204
M125H125LcAtcTt11B.1.20.000009
M125H125LcAtcTt11B.1.2580.000067
M125H125LcAtcTt11B.1.4270.00005
M125H125LcAtcTt11P.20.000187
M125H125LcAtcTt11Q.80.000165