CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = M : Mut = F53L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
M53F53LnonsynTtcCtc137950.69343126679-26681
M53F53LnonsynttCttA137240.17518226679-26681
M53F53LnonsynttCttG137160.11678826679-26681
M53F53LnonsynTtCCtT13720.014598526679-26681

Details of the mutation F53L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
M53F53LTtcCtc95137All0.000018
M53F53LttCttA24137All0.000005
M53F53LttCttG16137All0.000003
M53F53LTtCCtT2137All0
M53F53LTtcCtc2531B.1.1.70.000022
M53F53LttCttG431B.1.1.70.000004
M53F53LttCttA231B.1.1.70.000002
M53F53LttCttA1113AY.40.000017
M53F53LTtcCtc213AY.40.000003
M53F53LttCttG1212B.1.177.210.000918
M53F53LTtcCtc510B.10.000046
M53F53LttCttA410B.10.000037
M53F53LTtCCtT110B.10.000009
M53F53LTtcCtc99B.1.3510.000268
M53F53LTtcCtc88AY.430.000035
M53F53LTtcCtc57B.1.617.20.000019
M53F53LttCttA27B.1.617.20.000008
M53F53LTtcCtc55B.1.6270.010101
M53F53LTtcCtc44B.1.20.000035
M53F53LTtcCtc44B.1.4040.005208
M53F53LTtcCtc44B.1.5950.001044
M53F53LTtcCtc22AY.1030.000012
M53F53LttCttA12AY.260.000028
M53F53LTtcCtc12AY.260.000028
M53F53LTtcCtc22AY.30.00002
M53F53LTtcCtc22B.1.1.5190.000079
M53F53LTtcCtc11A.20.000662
M53F53LTtcCtc11AY.1000.000046
M53F53LttCttA11AY.1020.000027
M53F53LTtcCtc11AY.250.000006
M53F53LTtcCtc11AY.50.000021
M53F53LTtcCtc11AY.840.000437
M53F53LTtcCtc11AY.9.20.000037
M53F53LTtcCtc11AY.990.001049
M53F53LttCttA11B.1.1.2320.001815
M53F53LTtcCtc11B.1.1.3680.003086
M53F53LTtcCtc11B.1.1.370.000193
M53F53LTtcCtc11B.1.1.4160.000905
M53F53LTtcCtc11B.1.110.30.000718
M53F53LttCttA11B.1.1110.001175
M53F53LTtcCtc11B.1.1600.000031
M53F53LttCttA11B.1.1770.000013
M53F53LTtCCtT11B.1.4290.000024
M53F53LTtcCtc11B.1.4730.019231
M53F53LTtcCtc11B.60.00091
M53F53LTtcCtc11C.370.000116
M53F53LTtcCtc11D.20.000075
M53F53LTtcCtc11P.10.000016