CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = M : Mut = F28S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
M28F28SnonsyntTctCc26200.76923126604-26606
M28F28SnonsyntTCtCA2620.076923126604-26606
M28F28SnonsyntTCtCT2620.076923126604-26606
M28F28SnonsyntTCtCG2620.076923126604-26606

Details of the mutation F28S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
M28F28StTctCc2026All0.000004
M28F28StTCtCT226All0
M28F28StTCtCG226All0
M28F28StTCtCA226All0
M28F28StTctCc280.111111
M28F28StTCtCG280.111111
M28F28StTCtCT280.111111
M28F28StTCtCA280.111111
M28F28StTctCc55AY.290.000079
M28F28StTctCc44AY.100.00212
M28F28StTctCc11AY.440.000006
M28F28StTctCc11B0.000128
M28F28StTctCc11B.10.000009
M28F28StTctCc11B.1.1590.012195
M28F28StTctCc11B.1.1600.000031
M28F28StTctCc11B.1.20.000009
M28F28StTctCc11B.1.3110.000275
M28F28StTctCc11B.1.5760.000907
M28F28StTctCc11D.20.000075