CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = M : Mut = A2V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
M2A2VnonsyngCagTa787078650.99936526526-26528
M2A2VnonsyngCAgTT787020.0002541326526-26528
M2A2VnonsyngCAgTG787020.0002541326526-26528
M2A2VnonsyngCAgTC787010.00012706526526-26528

Details of the mutation A2V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
M2A2VgCagTa78657870All0.001504
M2A2VgCAgTT27870All0
M2A2VgCAgTG27870All0
M2A2VgCAgTC17870All0
M2A2VgCagTa13191320AY.1180.082634
M2A2VgCAgTG11320AY.1180.000063
M2A2VgCagTa963965B.1.1.70.000862
M2A2VgCAgTT2965B.1.1.70.000002
M2A2VgCagTa621621AY.40.000967
M2A2VgCagTa488488B.1.617.20.001838
M2A2VgCagTa357357B.1.4480.937008
M2A2VgCagTa307307AY.30.003054
M2A2VgCagTa307307AY.470.009549
M2A2VgCagTa210210B.1.1.4290.967742
M2A2VgCagTa209209B.1.1770.002752
M2A2VgCagTa192193B.10.001759
M2A2VgCAgTC1193B.10.000009
M2A2VgCagTa190190S.10.940594
M2A2VgCagTa144144B.1.1.2170.523636
M2A2VgCagTa132132B.1.1.2360.910345
M2A2VgCagTa128128B.1.1.500.086897
M2A2VgCagTa110110B.1.6200.104068
M2A2VgCagTa109109B.1.20.00096
M2A2VgCagTa103103AY.1030.00064
M2A2VgCagTa101101AY.98.10.004892
M2A2VgCagTa9999B.1.5540.436123
M2A2VgCagTa9797B.1.10.00176
M2A2VgCagTa8888B.1.6370.00643
M2A2VgCagTa8686AY.250.000517
M2A2VgCagTa8484AY.440.000511
M2A2VgCagTa7878B.1.2210.005541
M2A2VgCagTa7676P.10.001197
M2A2VgCagTa6262AY.430.000275
M2A2VgCagTa5656P.1.140.002677
M2A2VgCagTa5454AY.200.002099
M2A2VgCagTa5353AY.290.000836
M2A2VgCagTa4040C.370.004643
M2A2VgCagTa3838B.1.258.170.003951
M2A2VgCagTa3333AY.1190.001165
M2A2VgCagTa3232B.1.1.5190.001271
M2A2VgCagTa3131AY.1020.000822
M2A2VgCagTa2727AY.390.000667
M2A2VgCagTa2525B.1.177.820.011933
M2A2VgCagTa2222B.1.1.2820.255814
M2A2VgCagTa2121B.1.5260.000494
M2A2VgCagTa1818A.20.011913
M2A2VgCagTa1818B.1.177.810.003408
M2A2VgCagTa1717AY.120.10.005457
M2A2VgCagTa1717AY.420.000684
M2A2VgCagTa1616AY.9.10.00134
M2A2VgCagTa1414AY.140.001232
M2A2VgCagTa1414B.1.4270.000707
M2A2VgCagTa1414B.1.438.10.001502
M2A2VgCagTa1313AY.5.30.004386
M2A2VgCagTa1313B.1.2400.002802
M2A2VgCagTa1313B.1.3910.014656
M2A2VgCagTa1212AY.39.10.000475
M2A2VgCagTa1111AY.10.004353
M2A2VgCagTa1111AY.60.000452
M2A2VgCagTa1111B.1.2580.000732
M2A2VgCagTa1111B.1.351.20.003328
M2A2VgCagTa1010AY.370.003161
M2A2VgCagTa1010AY.450.001217
M2A2VgCagTa1010Q.80.001649
M2A2VgCagTa99AY.260.000255
M2A2VgCagTa99AY.4.20.000195
M2A2VgCagTa99AY.9.20.000331
M2A2VgCagTa99B0.00115
M2A2VgCagTa99B.1.1.2220.001836
M2A2VgCagTa88AY.230.000558
M2A2VgCagTa88B.1.1.4340.002788
M2A2VgCagTa88B.1.1600.00025
M2A2VgCagTa88B.1.177.210.000612
M2A2VgCagTa88B.1.177.600.001747
M2A2VgCagTa88B.1.5960.000697
M2A2VgCagTa77AC.10.259259
M2A2VgCagTa77AY.540.000667
M2A2VgCagTa77AY.920.002011
M2A2VgCagTa77B.1.1.2910.005197
M2A2VgCagTa77B.1.4380.045752
M2A2VgCagTa77B.1.5750.002124
M2A2VgCagTa77B.1.6210.00062
M2A2VgCagTa66AY.1000.000276
M2A2VgCagTa66AY.46.60.000433
M2A2VgCagTa66AY.50.000124
M2A2VgCagTa66B.1.1.2250.043165
M2A2VgCagTa66B.1.1.3060.00263
M2A2VgCagTa66B.1.1.4420.111111
M2A2VgCagTa66B.1.177.320.008097
M2A2VgCagTa66B.1.3510.000178
M2A2VgCagTa66B.1.3690.001711
M2A2VgCagTa66B.1.6280.002114
M2A2VgCagTa66B.1.970.153846
M2A2VgCagTa66R.10.00054
M2A2VgCagTa55AY.1210.000677
M2A2VgCagTa55AY.3.10.000426
M2A2VgCagTa55AY.300.001979
M2A2VgCagTa55AY.460.00052
M2A2VgCagTa55AY.980.000395
M2A2VgCagTa55B.1.1.280.001556
M2A2VgCagTa55B.1.1.4160.004525
M2A2VgCagTa55B.1.2340.00066
M2A2VgCagTa55B.1.4860.555556
M2A2VgCagTa55B.1.4970.001574
M2A2VgCagTa55P.1.150.001162
M2A2VgCagTa55Q.10.000632
M2A2VgCagTa55Q.40.002274
M2A2VgCagTa44AY.100.00212
M2A2VgCagTa44AY.1130.00057
M2A2VgCagTa44AY.1170.000338
M2A2VgCagTa44AY.330.000267
M2A2VgCagTa44B.1.1.10.001307
M2A2VgCagTa44B.1.1.1890.006051
M2A2VgCagTa44B.1.1.330.001684
M2A2VgCagTa44B.1.177.340.210526
M2A2VgCagTa44B.1.2430.000278
M2A2VgCagTa44B.1.3240.006421
M2A2VgCagTa44B.1.5230.009804
M2A2VgCagTa33A0.001161
M2A2VgCagTa33AD.20.000657
M2A2VgCagTa33AE.80.001467
M2A2VgCagTa33AY.270.000194
M2A2VgCagTa33AY.70.000588
M2A2VgCagTa33AY.750.000168
M2A2VgCagTa33AY.75.10.000541
M2A2VgCagTa33AY.99.20.000276
M2A2VgCagTa33B.1.1.1410.006036
M2A2VgCagTa33B.1.1.3170.001235
M2A2VgCagTa33B.1.1.510.005155
M2A2VgCagTa33B.1.177.300.007538
M2A2VgCagTa33B.1.177.540.001819
M2A2VgCagTa33B.1.177.560.002003
M2A2VgCagTa33B.1.4290.000071
M2A2VgCagTa33B.1.617.10.000387
M2A2VgCagTa33B.1.6380.157895
M2A2VgCagTa33B.1.9.50.017045
M2A2VgCagTa33P.1.120.001452
M2A2VgCagTa22A.50.003846
M2A2VgCagTa22AY.1100.000225
M2A2VgCagTa22AY.130.000322
M2A2VgCagTa22AY.340.000194
M2A2VgCagTa22AY.46.40.000329
M2A2VgCagTa22AY.5.40.000553
M2A2VgCagTa22AY.590.001059
M2A2VgCagTa22AY.610.00021
M2A2VgCagTa22AY.690.000373
M2A2VgCagTa22AY.820.002714
M2A2VgCagTa22AY.850.000854
M2A2VgCagTa22AY.90.000135
M2A2VgCagTa22AY.900.001369
M2A2VgCagTa22B.1.1.250.001137
M2A2VgCagTa22B.1.1.2650.006309
M2A2VgCagTa22B.1.1.2690.002706
M2A2VgCagTa22B.1.1.3010.002358
M2A2VgCagTa22B.1.1.370.000386
M2A2VgCagTa22B.1.1.4320.002532
M2A2VgCagTa22B.1.1.5230.003125
M2A2VgCagTa22B.1.1.700.000682
M2A2VgCagTa22B.1.177.190.002861
M2A2VgCagTa22B.1.177.750.002081
M2A2VgCagTa22B.1.2060.001631
M2A2VgCagTa22B.1.3110.000549
M2A2VgCagTa22B.1.5110.068966
M2A2VgCagTa22B.1.5250.000226
M2A2VgCagTa22B.1.5610.000794
M2A2VgCagTa22B.1.5820.000981
M2A2VgCagTa22B.1.5880.00182
M2A2VgCagTa12B.40.002208
M2A2VgCAgTG12B.40.002208
M2A2VgCagTa22K.20.08
M2A2VgCagTa22P.20.000373
M2A2VgCagTa11A.270.001656
M2A2VgCagTa11AY.1010.00049
M2A2VgCagTa11AY.1040.001984
M2A2VgCagTa11AY.1160.000287
M2A2VgCagTa11AY.116.10.000311
M2A2VgCagTa11AY.120.000316
M2A2VgCagTa11AY.1200.000037
M2A2VgCagTa11AY.120.20.001285
M2A2VgCagTa11AY.20.000356
M2A2VgCagTa11AY.240.000431
M2A2VgCagTa11AY.29.10.000221
M2A2VgCagTa11AY.360.000148
M2A2VgCagTa11AY.400.000964
M2A2VgCagTa11AY.46.20.000635
M2A2VgCagTa11AY.46.50.000198
M2A2VgCagTa11AY.530.000288
M2A2VgCagTa11AY.630.000387
M2A2VgCagTa11AY.640.000595
M2A2VgCagTa11AY.680.000274
M2A2VgCagTa11AY.7.10.000113
M2A2VgCagTa11AY.710.000475
M2A2VgCagTa11AY.720.001361
M2A2VgCagTa11AY.800.001129
M2A2VgCagTa11AY.870.000833
M2A2VgCagTa11AZ.50.003509
M2A2VgCagTa11B.1.1.1700.001247
M2A2VgCagTa11B.1.1.1920.002309
M2A2VgCagTa11B.1.1.2140.000055
M2A2VgCagTa11B.1.1.2200.001859
M2A2VgCagTa11B.1.1.2430.004082
M2A2VgCagTa11B.1.1.260.005236
M2A2VgCagTa11B.1.1.310.066667
M2A2VgCagTa11B.1.1.3120.001912
M2A2VgCagTa11B.1.1.4350.034483
M2A2VgCagTa11B.1.1.580.005376
M2A2VgCagTa11B.1.1110.001175
M2A2VgCagTa11B.1.1460.004237
M2A2VgCagTa11B.1.1470.000756
M2A2VgCagTa11B.1.160.280.002924
M2A2VgCagTa11B.1.160.80.001289
M2A2VgCagTa11B.1.177.410.0025
M2A2VgCagTa11B.1.177.510.004566
M2A2VgCagTa11B.1.177.570.000281
M2A2VgCagTa11B.1.177.650.000665
M2A2VgCagTa11B.1.214.20.0006
M2A2VgCagTa11B.1.2230.002778
M2A2VgCagTa11B.1.2360.002053
M2A2VgCagTa11B.1.2650.001271
M2A2VgCagTa11B.1.3350.010309
M2A2VgCagTa11B.1.3560.001727
M2A2VgCagTa11B.1.360.000146
M2A2VgCagTa11B.1.36.290.000517
M2A2VgCagTa11B.1.3610.001289
M2A2VgCagTa11B.1.3620.001541
M2A2VgCagTa11B.1.4160.001269
M2A2VgCagTa11B.1.4280.00102
M2A2VgCagTa11B.1.4330.003195
M2A2VgCagTa11B.1.4370.020833
M2A2VgCagTa11B.1.4530.003236
M2A2VgCagTa11B.1.466.20.000391
M2A2VgCagTa11B.1.5050.004386
M2A2VgCagTa11B.1.5170.000427
M2A2VgCagTa11B.1.5580.004566
M2A2VgCagTa11B.1.5950.000261
M2A2VgCagTa11B.1.6230.000536
M2A2VgCagTa11B.1.6270.00202
M2A2VgCagTa11B.110.005128
M2A2VgCagTa11B.270.015385
M2A2VgCagTa11B.3.10.001658
M2A2VgCagTa11C.10.002392
M2A2VgCagTa11C.160.00106
M2A2VgCagTa11C.270.018519
M2A2VgCagTa11C.390.018868
M2A2VgCagTa11D.20.000075
M2A2VgCagTa11P.1.20.001156