CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
M | 70 | V70L | nonsyn | Gtt | Ctt | 19660 | 19656 | 0.999797 | 26730-26732 | |
M | 70 | V70L | nonsyn | GtT | CtG | 19660 | 2 | 0.000101729 | 26730-26732 | |
M | 70 | V70L | nonsyn | GtT | CtC | 19660 | 2 | 0.000101729 | 26730-26732 | |
M | 70 | V70F | nonsyn | Gtt | Ttt | 4425 | 4425 | 1 | 26730-26732 | |
M | 70 | V70V | syn | gtT | gtC | 1102 | 1091 | 0.990018 | 26730-26732 | |
M | 70 | V70V | syn | gtT | gtG | 1102 | 9 | 0.00816697 | 26730-26732 | |
M | 70 | V70V | syn | gtT | gtA | 1102 | 2 | 0.00181488 | 26730-26732 | |
M | 70 | V70I | nonsyn | Gtt | Att | 933 | 930 | 0.996785 | 26730-26732 | |
M | 70 | V70I | nonsyn | GtT | AtC | 933 | 2 | 0.00214362 | 26730-26732 | |
M | 70 | V70I | nonsyn | GtT | AtA | 933 | 1 | 0.00107181 | 26730-26732 | |
M | 70 | V70A | nonsyn | gTt | gCt | 200 | 196 | 0.98 | 26730-26732 | |
M | 70 | V70A | nonsyn | gTT | gCC | 200 | 2 | 0.01 | 26730-26732 | |
M | 70 | V70A | nonsyn | gTT | gCG | 200 | 2 | 0.01 | 26730-26732 | |
M | 70 | V70del | del | GTT | --- | 71 | 71 | 1 | 26730-26732 | |
M | 70 | V70T | nonsyn | GTt | ACt | 8 | 3 | 0.375 | 26730-26732 | |
M | 70 | V70T | nonsyn | GTT | ACC | 8 | 2 | 0.25 | 26730-26732 | |
M | 70 | V70T | nonsyn | GTT | ACG | 8 | 2 | 0.25 | 26730-26732 | |
M | 70 | V70T | nonsyn | GTT | ACA | 8 | 1 | 0.125 | 26730-26732 | |
M | 70 | V70P | nonsyn | GTT | CCC | 6 | 2 | 0.333333 | 26730-26732 | |
M | 70 | V70P | nonsyn | GTT | CCG | 6 | 2 | 0.333333 | 26730-26732 | |
M | 70 | V70P | nonsyn | GTt | CCt | 6 | 2 | 0.333333 | 26730-26732 | |
M | 70 | V70D | nonsyn | gTt | gAt | 5 | 3 | 0.6 | 26730-26732 | |
M | 70 | V70D | nonsyn | gTT | gAC | 5 | 2 | 0.4 | 26730-26732 | |
M | 70 | V70H | nonsyn | GTt | CAt | 4 | 2 | 0.5 | 26730-26732 | |
M | 70 | V70H | nonsyn | GTT | CAC | 4 | 2 | 0.5 | 26730-26732 | |
M | 70 | V70N | nonsyn | GTt | AAt | 4 | 2 | 0.5 | 26730-26732 | |
M | 70 | V70N | nonsyn | GTT | AAC | 4 | 2 | 0.5 | 26730-26732 | |
M | 70 | V70del1 | del | Gtt | -tt | 3 | 3 | 1 | 26730-26732 | |
M | 70 | V70G | nonsyn | gTt | gGt | 3 | 3 | 1 | 26730-26732 | |
M | 70 | V70E | nonsyn | gTT | gAG | 2 | 2 | 1 | 26730-26732 | |
M | 70 | V70Q | nonsyn | GTT | CAG | 2 | 2 | 1 | 26730-26732 | |
M | 70 | V70M | nonsyn | GtT | AtG | 2 | 2 | 1 | 26730-26732 | |
M | 70 | V70K | nonsyn | GTT | AAG | 2 | 2 | 1 | 26730-26732 | |
M | 70 | V70del2 | del | gTT | g-- | 1 | 1 | 1 | 26730-26732 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
M | 70 | V70L | Gtt | Ctt | 19656 | 19660 | All | 0.003759 |
M | 70 | V70L | GtT | CtG | 2 | 19660 | All | 0 |
M | 70 | V70L | GtT | CtC | 2 | 19660 | All | 0 |
M | 70 | V70L | Gtt | Ctt | 12256 | 12256 | B.1.1.7 | 0.010972 |
M | 70 | V70L | Gtt | Ctt | 6873 | 6873 | Q.3 | 0.996809 |
M | 70 | V70F | Gtt | Ttt | 4425 | 4425 | All | 0.000846 |
M | 70 | V70V | gtT | gtC | 1091 | 1102 | All | 0.000209 |
M | 70 | V70V | gtT | gtG | 9 | 1102 | All | 0.000002 |
M | 70 | V70V | gtT | gtA | 2 | 1102 | All | 0 |
M | 70 | V70I | Gtt | Att | 930 | 933 | All | 0.000178 |
M | 70 | V70I | GtT | AtC | 2 | 933 | All | 0 |
M | 70 | V70I | GtT | AtA | 1 | 933 | All | 0 |
M | 70 | V70F | Gtt | Ttt | 838 | 838 | B.1.1.207 | 0.990544 |
M | 70 | V70V | gtT | gtC | 811 | 811 | AY.98 | 0.064065 |
M | 70 | V70F | Gtt | Ttt | 591 | 591 | AY.4 | 0.00092 |
M | 70 | V70F | Gtt | Ttt | 403 | 403 | B.1.1.7 | 0.000361 |
M | 70 | V70F | Gtt | Ttt | 369 | 369 | B.1.1 | 0.006694 |
M | 70 | V70I | Gtt | Att | 348 | 348 | B.1.1.48 | 1 |
M | 70 | V70F | Gtt | Ttt | 265 | 265 | B.1.617.2 | 0.000998 |
M | 70 | V70A | gTt | gCt | 196 | 200 | All | 0.000037 |
M | 70 | V70A | gTT | gCC | 2 | 200 | All | 0 |
M | 70 | V70A | gTT | gCG | 2 | 200 | All | 0 |
M | 70 | V70F | Gtt | Ttt | 131 | 131 | B.1 | 0.0012 |
M | 70 | V70V | gtT | gtC | 112 | 112 | B.1.2 | 0.000986 |
M | 70 | V70L | Gtt | Ctt | 105 | 105 | AY.118 | 0.006578 |
M | 70 | V70I | Gtt | Att | 94 | 94 | AY.44 | 0.000572 |
M | 70 | V70F | Gtt | Ttt | 89 | 89 | B.1.1.344 | 0.956989 |
M | 70 | V70F | Gtt | Ttt | 87 | 87 | R.1 | 0.007831 |
M | 70 | V70F | Gtt | Ttt | 84 | 84 | AY.25 | 0.000505 |
M | 70 | V70F | Gtt | Ttt | 81 | 81 | AY.3 | 0.000806 |
M | 70 | V70F | Gtt | Ttt | 79 | 79 | AY.43 | 0.00035 |
M | 70 | V70L | Gtt | Ctt | 73 | 73 | B.1.1 | 0.001324 |
M | 70 | V70I | Gtt | Att | 72 | 72 | B.1.1.7 | 0.000064 |
M | 70 | V70del | GTT | --- | 71 | 71 | All | 0.000014 |
M | 70 | V70F | Gtt | Ttt | 69 | 69 | P.1 | 0.001087 |
M | 70 | V70F | Gtt | Ttt | 67 | 67 | AY.100 | 0.003082 |
M | 70 | V70F | Gtt | Ttt | 67 | 67 | AY.103 | 0.000416 |
M | 70 | V70F | Gtt | Ttt | 66 | 66 | B.1.2 | 0.000581 |
M | 70 | V70F | Gtt | Ttt | 59 | 59 | B.1.177 | 0.000777 |
M | 70 | V70F | Gtt | Ttt | 58 | 58 | AY.44 | 0.000353 |
M | 70 | V70I | Gtt | Att | 57 | 57 | B.1.1 | 0.001034 |
M | 70 | V70A | gTt | gCt | 56 | 56 | AY.119 | 0.001977 |
M | 70 | V70del | GTT | --- | 49 | 49 | B.1.177.21 | 0.003747 |
M | 70 | V70F | Gtt | Ttt | 46 | 46 | B.1.1.63 | 0.017747 |
M | 70 | V70I | Gtt | Att | 46 | 46 | B.1.36.36 | 0.027694 |
M | 70 | V70F | Gtt | Ttt | 44 | 44 | AY.42 | 0.00177 |
M | 70 | V70F | Gtt | Ttt | 44 | 44 | B.1.1.519 | 0.001747 |
M | 70 | V70L | Gtt | Ctt | 44 | 44 | B.1.596 | 0.003834 |
M | 70 | V70L | Gtt | Ctt | 41 | 41 | B.1.2 | 0.000361 |
M | 70 | V70F | Gtt | Ttt | 39 | 39 | B.1.617.1 | 0.00503 |
M | 70 | V70I | Gtt | Att | 38 | 38 | AY.103 | 0.000236 |
M | 70 | V70V | gtT | gtC | 38 | 38 | B.1.617.2 | 0.000143 |
M | 70 | V70F | Gtt | Ttt | 37 | 37 | AY.27 | 0.002395 |
M | 70 | V70L | Gtt | Ctt | 34 | 34 | B.1.617.2 | 0.000128 |
M | 70 | V70I | Gtt | Att | 33 | 33 | B.1.177.81 | 0.006248 |
M | 70 | V70A | gTt | gCt | 30 | 30 | B.1.1.7 | 0.000027 |
M | 70 | V70A | gTt | gCt | 30 | 30 | B.1.429 | 0.000706 |
M | 70 | V70L | Gtt | Ctt | 28 | 28 | B.1.1.326 | 0.049296 |
M | 70 | V70F | Gtt | Ttt | 27 | 27 | AY.4.2 | 0.000586 |
M | 70 | V70F | Gtt | Ttt | 26 | 26 | B.1.596 | 0.002266 |
M | 70 | V70F | Gtt | Ttt | 25 | 25 | AY.119 | 0.000883 |
M | 70 | V70V | gtT | gtC | 24 | 24 | AY.102 | 0.000636 |
M | 70 | V70F | Gtt | Ttt | 24 | 24 | B.1.160 | 0.000749 |
M | 70 | V70F | Gtt | Ttt | 23 | 23 | B.1.177.77 | 0.016703 |
M | 70 | V70F | Gtt | Ttt | 22 | 22 | AY.39 | 0.000544 |
M | 70 | V70L | Gtt | Ctt | 22 | 22 | AY.4 | 0.000034 |
M | 70 | V70I | Gtt | Att | 21 | 21 | A.1 | 0.005919 |
M | 70 | V70L | Gtt | Ctt | 21 | 21 | B.1 | 0.000192 |
M | 70 | V70L | Gtt | Ctt | 21 | 21 | Q.8 | 0.003463 |
M | 70 | V70F | Gtt | Ttt | 19 | 19 | AY.102 | 0.000504 |
M | 70 | V70F | Gtt | Ttt | 19 | 19 | AY.61 | 0.001991 |
M | 70 | V70F | Gtt | Ttt | 18 | 18 | AY.29 | 0.000284 |
M | 70 | V70F | Gtt | Ttt | 18 | 18 | AY.98.1 | 0.000872 |
M | 70 | V70F | Gtt | Ttt | 18 | 18 | B.1.258 | 0.001198 |
M | 70 | V70I | Gtt | Att | 17 | 17 | AY.119 | 0.0006 |
M | 70 | V70I | Gtt | Att | 17 | 17 | B.1.617.2 | 0.000064 |
M | 70 | V70V | gtT | gtC | 16 | 16 | B.1.1.7 | 0.000014 |
M | 70 | V70I | Gtt | Att | 16 | 16 | B.1.2 | 0.000141 |
M | 70 | V70I | Gtt | Att | 15 | 15 | AY.3 | 0.000149 |
M | 70 | V70I | Gtt | Att | 15 | 15 | AY.4 | 0.000023 |
M | 70 | V70F | Gtt | Ttt | 14 | 14 | AY.20 | 0.000544 |
M | 70 | V70F | Gtt | Ttt | 14 | 14 | B.1.279 | 0.007191 |
M | 70 | V70F | Gtt | Ttt | 13 | 13 | AY.14 | 0.001144 |
M | 70 | V70L | Gtt | Ctt | 13 | 13 | AY.29 | 0.000205 |
M | 70 | V70V | gtT | gtC | 13 | 13 | AY.43 | 0.000058 |
M | 70 | V70F | Gtt | Ttt | 13 | 13 | B.1.1.189 | 0.019667 |
M | 70 | V70L | Gtt | Ctt | 13 | 13 | C.36 | 0.01184 |
M | 70 | V70L | Gtt | Ctt | 12 | 12 | B.1.177 | 0.000158 |
M | 70 | V70V | gtT | gtC | 11 | 11 | AY.4 | 0.000017 |
M | 70 | V70F | Gtt | Ttt | 11 | 11 | B.1.1.311 | 0.00394 |
M | 70 | V70F | Gtt | Ttt | 11 | 11 | P.1.14 | 0.000526 |
M | 70 | V70del | GTT | --- | 10 | 10 | B.1.1.7 | 0.000009 |
M | 70 | V70F | Gtt | Ttt | 10 | 10 | B.1.526 | 0.000235 |
M | 70 | V70V | gtT | gtC | 10 | 10 | C.14 | 0.04329 |
M | 70 | V70L | Gtt | Ctt | 9 | 9 | AY.113 | 0.001282 |
M | 70 | V70F | Gtt | Ttt | 9 | 9 | AY.113 | 0.001282 |
M | 70 | V70F | Gtt | Ttt | 9 | 9 | AY.121 | 0.001218 |
M | 70 | V70F | Gtt | Ttt | 9 | 9 | AY.23 | 0.000628 |
M | 70 | V70L | Gtt | Ctt | 9 | 9 | B.1.1.275 | 0.101124 |
M | 70 | V70F | Gtt | Ttt | 9 | 9 | B.1.258.17 | 0.000936 |
M | 70 | V70F | Gtt | Ttt | 9 | 9 | B.1.497 | 0.002833 |
M | 70 | V70F | Gtt | Ttt | 9 | 9 | P.1.15 | 0.002091 |
M | 70 | V70F | Gtt | Ttt | 9 | 9 | V.2 | 0.290323 |
M | 70 | V70T | GTt | ACt | 3 | 8 | All | 0.000001 |
M | 70 | V70T | GTT | ACG | 2 | 8 | All | 0 |
M | 70 | V70T | GTT | ACC | 2 | 8 | All | 0 |
M | 70 | V70T | GTT | ACA | 1 | 8 | All | 0 |
M | 70 | V70F | Gtt | Ttt | 8 | 8 | AY.26 | 0.000226 |
M | 70 | V70F | Gtt | Ttt | 8 | 8 | AY.33 | 0.000534 |
M | 70 | V70I | Gtt | Att | 8 | 8 | AY.43 | 0.000035 |
M | 70 | V70F | Gtt | Ttt | 8 | 8 | AY.47 | 0.000249 |
M | 70 | V70F | Gtt | Ttt | 8 | 8 | B.1.1.348 | 0.006369 |
M | 70 | V70I | Gtt | Att | 8 | 8 | B.1.177.60 | 0.001747 |
M | 70 | V70A | gTt | gCt | 8 | 8 | B.1.2 | 0.00007 |
M | 70 | V70I | Gtt | Att | 8 | 8 | B.1.258 | 0.000532 |
M | 70 | V70F | Gtt | Ttt | 8 | 8 | P.1.7 | 0.002554 |
M | 70 | V70I | Gtt | Att | 7 | 7 | AY.25 | 0.000042 |
M | 70 | V70A | gTt | gCt | 7 | 7 | AY.4 | 0.000011 |
M | 70 | V70F | Gtt | Ttt | 7 | 7 | AY.46.6 | 0.000505 |
M | 70 | V70F | Gtt | Ttt | 7 | 7 | AY.75 | 0.000392 |
M | 70 | V70F | Gtt | Ttt | 7 | 7 | AY.99.2 | 0.000645 |
M | 70 | V70F | Gtt | Ttt | 7 | 7 | B.1.1.507 | 0.06087 |
M | 70 | V70A | gTt | gCt | 7 | 7 | B.1.258 | 0.000466 |
M | 70 | V70F | Gtt | Ttt | 7 | 7 | B.1.427 | 0.000353 |
M | 70 | V70F | Gtt | Ttt | 7 | 7 | B.1.525 | 0.000792 |
M | 70 | V70F | Gtt | Ttt | 7 | 7 | B.1.628 | 0.002467 |
M | 70 | V70L | Gtt | Ctt | 7 | 7 | P.1 | 0.00011 |
M | 70 | V70I | Gtt | Att | 4 | 6 | 0.222222 | |
M | 70 | V70P | GTT | CCC | 2 | 6 | 0.111111 | |
M | 70 | V70T | GTT | ACG | 2 | 6 | 0.111111 | |
M | 70 | V70P | GTT | CCG | 2 | 6 | 0.111111 | |
M | 70 | V70T | GTt | ACt | 2 | 6 | 0.111111 | |
M | 70 | V70I | GtT | AtC | 2 | 6 | 0.111111 | |
M | 70 | V70L | GtT | CtC | 2 | 6 | 0.111111 | |
M | 70 | V70T | GTT | ACC | 2 | 6 | 0.111111 | |
M | 70 | V70P | GTt | CCt | 2 | 6 | 0.111111 | |
M | 70 | V70L | GtT | CtG | 2 | 6 | 0.111111 | |
M | 70 | V70A | gTT | gCC | 2 | 6 | 0.111111 | |
M | 70 | V70A | gTT | gCG | 2 | 6 | 0.111111 | |
M | 70 | V70L | Gtt | Ctt | 2 | 6 | 0.111111 | |
M | 70 | V70A | gTt | gCt | 2 | 6 | 0.111111 | |
M | 70 | V70P | GTT | CCC | 2 | 6 | All | 0 |
M | 70 | V70P | GTt | CCt | 2 | 6 | All | 0 |
M | 70 | V70P | GTT | CCG | 2 | 6 | All | 0 |
M | 70 | V70I | Gtt | Att | 6 | 6 | AY.13 | 0.000966 |
M | 70 | V70F | Gtt | Ttt | 6 | 6 | AY.29.1 | 0.001323 |
M | 70 | V70F | Gtt | Ttt | 6 | 6 | AY.6 | 0.000247 |
M | 70 | V70I | Gtt | Att | 6 | 6 | B.1 | 0.000055 |
M | 70 | V70A | gTt | gCt | 6 | 6 | B.1 | 0.000055 |
M | 70 | V70F | Gtt | Ttt | 6 | 6 | B.1.1.214 | 0.000333 |
M | 70 | V70V | gtT | gtC | 6 | 6 | B.1.177.60 | 0.001311 |
M | 70 | V70A | gTt | gCt | 6 | 6 | B.1.568 | 0.006667 |
M | 70 | V70F | Gtt | Ttt | 6 | 6 | B.1.609 | 0.002876 |
M | 70 | V70A | gTt | gCt | 6 | 6 | B.1.617.2 | 0.000023 |
M | 70 | V70F | Gtt | Ttt | 6 | 6 | B.1.621 | 0.000531 |
M | 70 | V70A | gTt | gCt | 6 | 6 | B.6.6 | 0.005333 |
M | 70 | V70D | gTt | gAt | 3 | 5 | All | 0.000001 |
M | 70 | V70D | gTT | gAC | 2 | 5 | All | 0 |
M | 70 | V70V | gtT | gtC | 5 | 5 | AY.106 | 0.001674 |
M | 70 | V70F | Gtt | Ttt | 5 | 5 | AY.111 | 0.000916 |
M | 70 | V70V | gtT | gtC | 5 | 5 | AY.25 | 0.00003 |
M | 70 | V70F | Gtt | Ttt | 5 | 5 | AY.53 | 0.001438 |
M | 70 | V70F | Gtt | Ttt | 5 | 5 | AY.93 | 0.001365 |
M | 70 | V70F | Gtt | Ttt | 5 | 5 | B | 0.000639 |
M | 70 | V70V | gtT | gtC | 5 | 5 | B.1.1.322 | 0.04386 |
M | 70 | V70F | Gtt | Ttt | 5 | 5 | B.1.243 | 0.000348 |
M | 70 | V70F | Gtt | Ttt | 5 | 5 | B.1.252 | 0.033113 |
M | 70 | V70F | Gtt | Ttt | 5 | 5 | B.1.351.2 | 0.001513 |
M | 70 | V70D | gTT | gAC | 2 | 4 | 0.111111 | |
M | 70 | V70N | GTT | AAC | 2 | 4 | 0.111111 | |
M | 70 | V70N | GTt | AAt | 2 | 4 | 0.111111 | |
M | 70 | V70V | gtT | gtG | 2 | 4 | 0.111111 | |
M | 70 | V70H | GTt | CAt | 2 | 4 | 0.111111 | |
M | 70 | V70H | GTT | CAC | 2 | 4 | 0.111111 | |
M | 70 | V70V | gtT | gtC | 2 | 4 | 0.111111 | |
M | 70 | V70D | gTt | gAt | 2 | 4 | 0.111111 | |
M | 70 | V70F | Gtt | Ttt | 4 | 4 | A | 0.001548 |
M | 70 | V70H | GTT | CAC | 2 | 4 | All | 0 |
M | 70 | V70N | GTT | AAC | 2 | 4 | All | 0 |
M | 70 | V70N | GTt | AAt | 2 | 4 | All | 0 |
M | 70 | V70H | GTt | CAt | 2 | 4 | All | 0 |
M | 70 | V70I | Gtt | Att | 4 | 4 | AY.102 | 0.000106 |
M | 70 | V70F | Gtt | Ttt | 4 | 4 | AY.114 | 0.000924 |
M | 70 | V70F | Gtt | Ttt | 4 | 4 | AY.117 | 0.000338 |
M | 70 | V70I | Gtt | Att | 4 | 4 | AY.20 | 0.000155 |
M | 70 | V70F | Gtt | Ttt | 4 | 4 | AY.3.1 | 0.000341 |
M | 70 | V70F | Gtt | Ttt | 4 | 4 | AY.34 | 0.000388 |
M | 70 | V70I | Gtt | Att | 4 | 4 | AY.36 | 0.000593 |
M | 70 | V70F | Gtt | Ttt | 4 | 4 | AY.4.4 | 0.001637 |
M | 70 | V70F | Gtt | Ttt | 4 | 4 | AY.45 | 0.000487 |
M | 70 | V70F | Gtt | Ttt | 4 | 4 | AY.46 | 0.000416 |
M | 70 | V70I | Gtt | Att | 4 | 4 | AY.6 | 0.000165 |
M | 70 | V70I | Gtt | Att | 4 | 4 | AY.64 | 0.002381 |
M | 70 | V70V | gtT | gtC | 4 | 4 | B.1 | 0.000037 |
M | 70 | V70F | Gtt | Ttt | 4 | 4 | B.1.1.25 | 0.002274 |
M | 70 | V70F | Gtt | Ttt | 4 | 4 | B.1.1.284 | 0.00043 |
M | 70 | V70F | Gtt | Ttt | 4 | 4 | B.1.1.301 | 0.004717 |
M | 70 | V70F | Gtt | Ttt | 4 | 4 | B.1.1.37 | 0.000771 |
M | 70 | V70L | Gtt | Ctt | 4 | 4 | B.1.1.39 | 0.002039 |
M | 70 | V70F | Gtt | Ttt | 4 | 4 | B.1.1.462 | 0.034483 |
M | 70 | V70V | gtT | gtC | 4 | 4 | B.1.1.519 | 0.000159 |
M | 70 | V70F | Gtt | Ttt | 4 | 4 | B.1.1.61 | 0.035088 |
M | 70 | V70F | Gtt | Ttt | 4 | 4 | B.1.139 | 0.002933 |
M | 70 | V70F | Gtt | Ttt | 4 | 4 | B.1.177.60 | 0.000874 |
M | 70 | V70F | Gtt | Ttt | 4 | 4 | B.1.214.2 | 0.002398 |
M | 70 | V70F | Gtt | Ttt | 4 | 4 | B.1.240 | 0.000862 |
M | 70 | V70L | Gtt | Ctt | 4 | 4 | B.1.429 | 0.000094 |
M | 70 | V70L | Gtt | Ctt | 4 | 4 | B.1.576 | 0.003626 |
M | 70 | V70F | Gtt | Ttt | 4 | 4 | B.1.637 | 0.000292 |
M | 70 | V70F | Gtt | Ttt | 4 | 4 | C.35 | 0.003096 |
M | 70 | V70del1 | Gtt | -tt | 3 | 3 | All | 0.000001 |
M | 70 | V70G | gTt | gGt | 3 | 3 | All | 0.000001 |
M | 70 | V70I | Gtt | Att | 3 | 3 | AY.100 | 0.000138 |
M | 70 | V70F | Gtt | Ttt | 3 | 3 | AY.105 | 0.001929 |
M | 70 | V70F | Gtt | Ttt | 3 | 3 | AY.116 | 0.00086 |
M | 70 | V70F | Gtt | Ttt | 3 | 3 | AY.120 | 0.000112 |
M | 70 | V70L | Gtt | Ctt | 3 | 3 | AY.25 | 0.000018 |
M | 70 | V70A | gTt | gCt | 3 | 3 | AY.30 | 0.001187 |
M | 70 | V70V | gtT | gtC | 3 | 3 | AY.33 | 0.0002 |
M | 70 | V70I | Gtt | Att | 3 | 3 | AY.39 | 0.000074 |
M | 70 | V70L | Gtt | Ctt | 3 | 3 | AY.43 | 0.000013 |
M | 70 | V70F | Gtt | Ttt | 3 | 3 | AY.46.1 | 0.00308 |
M | 70 | V70F | Gtt | Ttt | 3 | 3 | AY.5 | 0.000062 |
M | 70 | V70F | Gtt | Ttt | 3 | 3 | AY.75.1 | 0.000541 |
M | 70 | V70F | Gtt | Ttt | 3 | 3 | AY.9 | 0.000203 |
M | 70 | V70F | Gtt | Ttt | 3 | 3 | AY.9.2 | 0.00011 |
M | 70 | V70I | Gtt | Att | 3 | 3 | B.1.1.306 | 0.001315 |
M | 70 | V70I | Gtt | Att | 3 | 3 | B.1.177 | 0.00004 |
M | 70 | V70A | gTt | gCt | 3 | 3 | B.1.221 | 0.000213 |
M | 70 | V70L | Gtt | Ctt | 3 | 3 | B.1.243 | 0.000209 |
M | 70 | V70I | Gtt | Att | 3 | 3 | B.1.243 | 0.000209 |
M | 70 | V70I | Gtt | Att | 3 | 3 | B.1.298 | 0.006342 |
M | 70 | V70L | Gtt | Ctt | 3 | 3 | B.1.351 | 0.000089 |
M | 70 | V70F | Gtt | Ttt | 3 | 3 | B.1.351 | 0.000089 |
M | 70 | V70F | Gtt | Ttt | 3 | 3 | B.1.36 | 0.000438 |
M | 70 | V70F | Gtt | Ttt | 3 | 3 | B.1.415.1 | 0.022727 |
M | 70 | V70L | Gtt | Ctt | 3 | 3 | B.1.427 | 0.000151 |
M | 70 | V70F | Gtt | Ttt | 3 | 3 | B.1.429 | 0.000071 |
M | 70 | V70V | gtT | gtC | 3 | 3 | B.1.575 | 0.00091 |
M | 70 | V70F | Gtt | Ttt | 3 | 3 | B.1.587 | 0.005693 |
M | 70 | V70F | Gtt | Ttt | 3 | 3 | B.1.627 | 0.006061 |
M | 70 | V70F | Gtt | Ttt | 3 | 3 | B.4 | 0.006623 |
M | 70 | V70V | gtT | gtG | 3 | 3 | B.40 | 0.001093 |
M | 70 | V70I | Gtt | Att | 3 | 3 | C.37 | 0.000348 |
M | 70 | V70I | Gtt | Att | 3 | 3 | P.1 | 0.000047 |
M | 70 | V70F | Gtt | Ttt | 3 | 3 | P.1.13 | 0.002695 |
M | 70 | V70L | Gtt | Ctt | 3 | 3 | Q.4 | 0.001364 |
M | 70 | V70K | GTT | AAG | 2 | 2 | 0.111111 | |
M | 70 | V70del | GTT | --- | 2 | 2 | 0.111111 | |
M | 70 | V70M | GtT | AtG | 2 | 2 | 0.111111 | |
M | 70 | V70Q | GTT | CAG | 2 | 2 | 0.111111 | |
M | 70 | V70E | gTT | gAG | 2 | 2 | 0.111111 | |
M | 70 | V70Q | GTT | CAG | 2 | 2 | All | 0 |
M | 70 | V70M | GtT | AtG | 2 | 2 | All | 0 |
M | 70 | V70E | gTT | gAG | 2 | 2 | All | 0 |
M | 70 | V70K | GTT | AAG | 2 | 2 | All | 0 |
M | 70 | V70F | Gtt | Ttt | 2 | 2 | AY.118 | 0.000125 |
M | 70 | V70F | Gtt | Ttt | 2 | 2 | AY.16 | 0.000759 |
M | 70 | V70V | gtT | gtC | 2 | 2 | AY.23 | 0.000139 |
M | 70 | V70A | gTt | gCt | 2 | 2 | AY.25 | 0.000012 |
M | 70 | V70I | Gtt | Att | 2 | 2 | AY.26 | 0.000057 |
M | 70 | V70L | Gtt | Ctt | 2 | 2 | AY.29.1 | 0.000441 |
M | 70 | V70V | gtT | gtC | 2 | 2 | AY.34 | 0.000194 |
M | 70 | V70F | Gtt | Ttt | 2 | 2 | AY.37 | 0.000632 |
M | 70 | V70F | Gtt | Ttt | 2 | 2 | AY.4.5 | 0.000215 |
M | 70 | V70L | Gtt | Ctt | 2 | 2 | AY.44 | 0.000012 |
M | 70 | V70A | gTt | gCt | 2 | 2 | AY.44 | 0.000012 |
M | 70 | V70I | Gtt | Att | 2 | 2 | AY.45 | 0.000243 |
M | 70 | V70F | Gtt | Ttt | 2 | 2 | AY.46.5 | 0.000397 |
M | 70 | V70I | Gtt | Att | 2 | 2 | AY.47 | 0.000062 |
M | 70 | V70L | Gtt | Ctt | 2 | 2 | AY.47 | 0.000062 |
M | 70 | V70I | Gtt | Att | 2 | 2 | AY.5 | 0.000041 |
M | 70 | V70F | Gtt | Ttt | 2 | 2 | AY.5.4 | 0.000553 |
M | 70 | V70F | Gtt | Ttt | 2 | 2 | AY.55 | 0.001835 |
M | 70 | V70F | Gtt | Ttt | 2 | 2 | AY.59 | 0.001059 |
M | 70 | V70F | Gtt | Ttt | 2 | 2 | AY.69 | 0.000373 |
M | 70 | V70F | Gtt | Ttt | 2 | 2 | AY.7 | 0.000392 |
M | 70 | V70I | Gtt | Att | 2 | 2 | AY.73 | 0.001331 |
M | 70 | V70L | Gtt | Ctt | 2 | 2 | AY.74 | 0.000231 |
M | 70 | V70F | Gtt | Ttt | 2 | 2 | AY.84 | 0.000875 |
M | 70 | V70F | Gtt | Ttt | 2 | 2 | AY.92 | 0.000575 |
M | 70 | V70F | Gtt | Ttt | 2 | 2 | AY.99 | 0.002099 |
M | 70 | V70F | Gtt | Ttt | 2 | 2 | B.1.1.1 | 0.000653 |
M | 70 | V70L | Gtt | Ctt | 2 | 2 | B.1.1.161 | 0.007067 |
M | 70 | V70I | Gtt | Att | 2 | 2 | B.1.1.174 | 0.006757 |
M | 70 | V70F | Gtt | Ttt | 2 | 2 | B.1.1.216 | 0.001781 |
M | 70 | V70F | Gtt | Ttt | 2 | 2 | B.1.1.279 | 0.002242 |
M | 70 | V70A | gTt | gCt | 2 | 2 | B.1.1.28 | 0.000622 |
M | 70 | V70F | Gtt | Ttt | 2 | 2 | B.1.1.326 | 0.003521 |
M | 70 | V70F | Gtt | Ttt | 2 | 2 | B.1.1.369 | 0.000892 |
M | 70 | V70F | Gtt | Ttt | 2 | 2 | B.1.1.398 | 0.006452 |
M | 70 | V70F | Gtt | Ttt | 2 | 2 | B.1.1.410 | 0.074074 |
M | 70 | V70L | Gtt | Ctt | 2 | 2 | B.1.1.519 | 0.000079 |
M | 70 | V70A | gTt | gCt | 2 | 2 | B.1.160 | 0.000062 |
M | 70 | V70F | Gtt | Ttt | 2 | 2 | B.1.160.8 | 0.002577 |
M | 70 | V70T | GTT | ACA | 1 | 2 | B.1.177.21 | 0.000076 |
M | 70 | V70T | GTt | ACt | 1 | 2 | B.1.177.21 | 0.000076 |
M | 70 | V70F | Gtt | Ttt | 2 | 2 | B.1.177.33 | 0.003289 |
M | 70 | V70F | Gtt | Ttt | 2 | 2 | B.1.177.81 | 0.000379 |
M | 70 | V70F | Gtt | Ttt | 2 | 2 | B.1.177.87 | 0.001456 |
M | 70 | V70F | Gtt | Ttt | 2 | 2 | B.1.210 | 0.004264 |
M | 70 | V70F | Gtt | Ttt | 2 | 2 | B.1.221 | 0.000142 |
M | 70 | V70F | Gtt | Ttt | 2 | 2 | B.1.234 | 0.000264 |
M | 70 | V70I | Gtt | Att | 2 | 2 | B.1.351 | 0.000059 |
M | 70 | V70I | Gtt | Att | 2 | 2 | B.1.36 | 0.000292 |
M | 70 | V70F | Gtt | Ttt | 2 | 2 | B.1.517 | 0.000854 |
M | 70 | V70V | gtT | gtG | 2 | 2 | B.1.526 | 0.000047 |
M | 70 | V70L | Gtt | Ctt | 2 | 2 | B.1.537 | 0.04 |
M | 70 | V70F | Gtt | Ttt | 2 | 2 | B.1.564 | 0.000852 |
M | 70 | V70F | Gtt | Ttt | 2 | 2 | B.1.595 | 0.000522 |
M | 70 | V70I | Gtt | Att | 2 | 2 | B.1.596 | 0.000174 |
M | 70 | V70I | Gtt | Att | 2 | 2 | B.1.621 | 0.000177 |
M | 70 | V70L | Gtt | Ctt | 2 | 2 | B.1.621.1 | 0.001012 |
M | 70 | V70V | gtT | gtC | 2 | 2 | B.1.625 | 0.004706 |
M | 70 | V70L | Gtt | Ctt | 2 | 2 | B.1.637 | 0.000146 |
M | 70 | V70F | Gtt | Ttt | 2 | 2 | C.36 | 0.001821 |
M | 70 | V70F | Gtt | Ttt | 2 | 2 | C.37 | 0.000232 |
M | 70 | V70A | gTt | gCt | 2 | 2 | P.1 | 0.000032 |
M | 70 | V70V | gtT | gtC | 2 | 2 | P.1 | 0.000032 |
M | 70 | V70F | Gtt | Ttt | 2 | 2 | P.1.16 | 0.000748 |
M | 70 | V70G | gTt | gGt | 1 | 1 | 0.055556 | |
M | 70 | V70V | gtT | gtG | 1 | 1 | A | 0.000387 |
M | 70 | V70A | gTt | gCt | 1 | 1 | A.2 | 0.000662 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | A.2.2 | 0.001689 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | A.2.4 | 0.003367 |
M | 70 | V70L | Gtt | Ctt | 1 | 1 | A.5 | 0.001923 |
M | 70 | V70del2 | gTT | g-- | 1 | 1 | All | 0 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | AP.1 | 0.001502 |
M | 70 | V70L | Gtt | Ctt | 1 | 1 | AY.102 | 0.000027 |
M | 70 | V70L | Gtt | Ctt | 1 | 1 | AY.103 | 0.000006 |
M | 70 | V70V | gtT | gtC | 1 | 1 | AY.103 | 0.000006 |
M | 70 | V70A | gTt | gCt | 1 | 1 | AY.103 | 0.000006 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | AY.107 | 0.000466 |
M | 70 | V70del | GTT | --- | 1 | 1 | AY.120 | 0.000037 |
M | 70 | V70V | gtT | gtC | 1 | 1 | AY.120 | 0.000037 |
M | 70 | V70G | gTt | gGt | 1 | 1 | AY.14 | 0.000088 |
M | 70 | V70A | gTt | gCt | 1 | 1 | AY.14 | 0.000088 |
M | 70 | V70A | gTt | gCt | 1 | 1 | AY.20 | 0.000039 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | AY.22 | 0.002092 |
M | 70 | V70I | Gtt | Att | 1 | 1 | AY.23 | 0.00007 |
M | 70 | V70I | Gtt | Att | 1 | 1 | AY.23.1 | 0.000417 |
M | 70 | V70I | Gtt | Att | 1 | 1 | AY.27 | 0.000065 |
M | 70 | V70V | gtT | gtC | 1 | 1 | AY.29 | 0.000016 |
M | 70 | V70L | Gtt | Ctt | 1 | 1 | AY.3 | 0.00001 |
M | 70 | V70A | gTt | gCt | 1 | 1 | AY.3 | 0.00001 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | AY.34.1 | 0.00051 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | AY.38 | 0.000499 |
M | 70 | V70V | gtT | gtC | 1 | 1 | AY.39 | 0.000025 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | AY.39.1 | 0.00004 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | AY.4.3 | 0.000842 |
M | 70 | V70L | Gtt | Ctt | 1 | 1 | AY.4.3 | 0.000842 |
M | 70 | V70A | gTt | gCt | 1 | 1 | AY.42 | 0.00004 |
M | 70 | V70del | GTT | --- | 1 | 1 | AY.43 | 0.000004 |
M | 70 | V70V | gtT | gtC | 1 | 1 | AY.44 | 0.000006 |
M | 70 | V70I | Gtt | Att | 1 | 1 | AY.46 | 0.000104 |
M | 70 | V70V | gtT | gtC | 1 | 1 | AY.5 | 0.000021 |
M | 70 | V70L | Gtt | Ctt | 1 | 1 | AY.5 | 0.000021 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | AY.5.3 | 0.000337 |
M | 70 | V70I | Gtt | Att | 1 | 1 | AY.50 | 0.000799 |
M | 70 | V70A | gTt | gCt | 1 | 1 | AY.53 | 0.000288 |
M | 70 | V70I | Gtt | Att | 1 | 1 | AY.61 | 0.000105 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | AY.62 | 0.000436 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | AY.64 | 0.000595 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | AY.67 | 0.000464 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | AY.7.1 | 0.000113 |
M | 70 | V70I | Gtt | Att | 1 | 1 | AY.70 | 0.000209 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | AY.70 | 0.000209 |
M | 70 | V70I | Gtt | Att | 1 | 1 | AY.74 | 0.000116 |
M | 70 | V70D | gTt | gAt | 1 | 1 | AY.75 | 0.000056 |
M | 70 | V70I | Gtt | Att | 1 | 1 | AY.75 | 0.000056 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | AY.77 | 0.001127 |
M | 70 | V70V | gtT | gtC | 1 | 1 | AY.78 | 0.001541 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | AY.89 | 0.004902 |
M | 70 | V70I | Gtt | Att | 1 | 1 | AY.9 | 0.000068 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | AY.9.1 | 0.000084 |
M | 70 | V70I | Gtt | Att | 1 | 1 | AY.92 | 0.000287 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | AY.94 | 0.000443 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | AY.95 | 0.000761 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | AY.97 | 0.001701 |
M | 70 | V70V | gtT | gtC | 1 | 1 | AY.98.1 | 0.000048 |
M | 70 | V70V | gtT | gtA | 1 | 1 | AY.99.2 | 0.000092 |
M | 70 | V70I | Gtt | Att | 1 | 1 | AZ.2 | 0.000821 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | AZ.3 | 0.00152 |
M | 70 | V70L | Gtt | Ctt | 1 | 1 | B | 0.000128 |
M | 70 | V70I | Gtt | Att | 1 | 1 | B | 0.000128 |
M | 70 | V70del | GTT | --- | 1 | 1 | B.1 | 0.000009 |
M | 70 | V70V | gtT | gtC | 1 | 1 | B.1.1 | 0.000018 |
M | 70 | V70A | gTt | gCt | 1 | 1 | B.1.1 | 0.000018 |
M | 70 | V70L | Gtt | Ctt | 1 | 1 | B.1.1.1 | 0.000327 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.1.174 | 0.003378 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.1.205 | 0.003717 |
M | 70 | V70I | Gtt | Att | 1 | 1 | B.1.1.216 | 0.00089 |
M | 70 | V70L | Gtt | Ctt | 1 | 1 | B.1.1.222 | 0.000204 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.1.222 | 0.000204 |
M | 70 | V70I | Gtt | Att | 1 | 1 | B.1.1.254 | 0.011236 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.1.261 | 0.008621 |
M | 70 | V70I | Gtt | Att | 1 | 1 | B.1.1.266 | 0.012195 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.1.274 | 0.005051 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.1.277 | 0.000759 |
M | 70 | V70I | Gtt | Att | 1 | 1 | B.1.1.305 | 0.003861 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.1.306 | 0.000438 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.1.307 | 0.002532 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.1.317 | 0.000412 |
M | 70 | V70L | Gtt | Ctt | 1 | 1 | B.1.1.329 | 0.003846 |
M | 70 | V70I | Gtt | Att | 1 | 1 | B.1.1.33 | 0.000421 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.1.33 | 0.000421 |
M | 70 | V70I | Gtt | Att | 1 | 1 | B.1.1.333 | 0.001076 |
M | 70 | V70del | GTT | --- | 1 | 1 | B.1.1.372 | 0.000689 |
M | 70 | V70L | Gtt | Ctt | 1 | 1 | B.1.1.375 | 0.011905 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.1.41 | 0.006329 |
M | 70 | V70I | Gtt | Att | 1 | 1 | B.1.1.416 | 0.000905 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.1.44 | 0.00241 |
M | 70 | V70I | Gtt | Att | 1 | 1 | B.1.1.467 | 0.019231 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.1.50 | 0.000679 |
M | 70 | V70A | gTt | gCt | 1 | 1 | B.1.1.506 | 0.037037 |
M | 70 | V70A | gTt | gCt | 1 | 1 | B.1.1.519 | 0.00004 |
M | 70 | V70L | Gtt | Ctt | 1 | 1 | B.1.1.524 | 0.020833 |
M | 70 | V70I | Gtt | Att | 1 | 1 | B.1.1.526 | 0.003546 |
M | 70 | V70del2 | gTT | g-- | 1 | 1 | B.1.1.7 | 0.000001 |
M | 70 | V70del1 | Gtt | -tt | 1 | 1 | B.1.1.7 | 0.000001 |
M | 70 | V70L | Gtt | Ctt | 1 | 1 | B.1.1.8 | 0.003584 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.104 | 0.00369 |
M | 70 | V70A | gTt | gCt | 1 | 1 | B.1.111 | 0.001175 |
M | 70 | V70I | Gtt | Att | 1 | 1 | B.1.128 | 0.000635 |
M | 70 | V70L | Gtt | Ctt | 1 | 1 | B.1.139 | 0.000733 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.158 | 0.02381 |
M | 70 | V70L | Gtt | Ctt | 1 | 1 | B.1.160.28 | 0.002924 |
M | 70 | V70I | GtT | AtA | 1 | 1 | B.1.161 | 0.017241 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.177.19 | 0.001431 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.177.21 | 0.000076 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.177.23 | 0.003236 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.177.43 | 0.001477 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.177.54 | 0.000606 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.177.57 | 0.000281 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.177.65 | 0.000665 |
M | 70 | V70L | Gtt | Ctt | 1 | 1 | B.1.177.7 | 0.000165 |
M | 70 | V70L | Gtt | Ctt | 1 | 1 | B.1.177.73 | 0.000566 |
M | 70 | V70V | gtT | gtA | 1 | 1 | B.1.177.73 | 0.000566 |
M | 70 | V70A | gTt | gCt | 1 | 1 | B.1.177.73 | 0.000566 |
M | 70 | V70L | Gtt | Ctt | 1 | 1 | B.1.177.81 | 0.000189 |
M | 70 | V70I | Gtt | Att | 1 | 1 | B.1.177.82 | 0.000477 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.179 | 0.003759 |
M | 70 | V70L | Gtt | Ctt | 1 | 1 | B.1.189 | 0.004292 |
M | 70 | V70del1 | Gtt | -tt | 1 | 1 | B.1.2 | 0.000009 |
M | 70 | V70A | gTt | gCt | 1 | 1 | B.1.215 | 0.009615 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.232 | 0.000537 |
M | 70 | V70A | gTt | gCt | 1 | 1 | B.1.234 | 0.000132 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.236 | 0.002053 |
M | 70 | V70L | Gtt | Ctt | 1 | 1 | B.1.240 | 0.000216 |
M | 70 | V70V | gtT | gtC | 1 | 1 | B.1.258 | 0.000067 |
M | 70 | V70I | Gtt | Att | 1 | 1 | B.1.258.11 | 0.000396 |
M | 70 | V70del | GTT | --- | 1 | 1 | B.1.258.11 | 0.000396 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.311 | 0.000275 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.356 | 0.001727 |
M | 70 | V70L | Gtt | Ctt | 1 | 1 | B.1.36 | 0.000146 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.36.35 | 0.002604 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.367 | 0.000792 |
M | 70 | V70L | Gtt | Ctt | 1 | 1 | B.1.375 | 0.00082 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.378 | 0.006849 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.383 | 0.009009 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.393 | 0.028571 |
M | 70 | V70I | Gtt | Att | 1 | 1 | B.1.396 | 0.000706 |
M | 70 | V70A | gTt | gCt | 1 | 1 | B.1.396 | 0.000706 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.416 | 0.001269 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.418 | 0.015873 |
M | 70 | V70A | gTt | gCt | 1 | 1 | B.1.427 | 0.00005 |
M | 70 | V70V | gtT | gtG | 1 | 1 | B.1.429 | 0.000024 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.438.1 | 0.000107 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.444 | 0.015873 |
M | 70 | V70del | GTT | --- | 1 | 1 | B.1.577 | 0.000687 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.582 | 0.000491 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.589 | 0.007576 |
M | 70 | V70del | GTT | --- | 1 | 1 | B.1.596 | 0.000087 |
M | 70 | V70V | gtT | gtC | 1 | 1 | B.1.596 | 0.000087 |
M | 70 | V70G | gTt | gGt | 1 | 1 | B.1.617.2 | 0.000004 |
M | 70 | V70del | GTT | --- | 1 | 1 | B.1.617.2 | 0.000004 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.619 | 0.000871 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.625 | 0.002353 |
M | 70 | V70del | GTT | --- | 1 | 1 | B.1.627 | 0.00202 |
M | 70 | V70L | Gtt | Ctt | 1 | 1 | B.1.628 | 0.000352 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.1.638 | 0.052632 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.27 | 0.015385 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.28 | 0.003279 |
M | 70 | V70I | Gtt | Att | 1 | 1 | B.3 | 0.000831 |
M | 70 | V70L | Gtt | Ctt | 1 | 1 | B.40 | 0.000364 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.6 | 0.00091 |
M | 70 | V70I | Gtt | Att | 1 | 1 | B.6.6 | 0.000889 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | B.6.6 | 0.000889 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | C.36.3 | 0.000567 |
M | 70 | V70del1 | Gtt | -tt | 1 | 1 | D.2 | 0.000075 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | D.2 | 0.000075 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | N.1 | 0.016949 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | N.4 | 0.004255 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | N.5 | 0.001767 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | P.1.12 | 0.000484 |
M | 70 | V70del | GTT | --- | 1 | 1 | P.1.15 | 0.000232 |
M | 70 | V70L | Gtt | Ctt | 1 | 1 | P.1.7 | 0.000319 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | P.2 | 0.000187 |
M | 70 | V70I | Gtt | Att | 1 | 1 | P.6 | 0.003145 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | Q.3 | 0.000145 |
M | 70 | V70F | Gtt | Ttt | 1 | 1 | Q.4 | 0.000455 |
M | 70 | V70I | Gtt | Att | 1 | 1 | Q.8 | 0.000165 |
![]() |
![]() |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
|