CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
M | 4 | S4F | nonsyn | tCc | tTc | 1911 | 1904 | 0.996337 | 26532-26534 | |
M | 4 | S4F | nonsyn | tCC | tTT | 1911 | 7 | 0.003663 | 26532-26534 | |
M | 4 | S4S | syn | tcC | tcT | 1522 | 1422 | 0.934297 | 26532-26534 | |
M | 4 | S4S | syn | tcC | tcA | 1522 | 76 | 0.0499343 | 26532-26534 | |
M | 4 | S4S | syn | tcC | tcG | 1522 | 24 | 0.0157687 | 26532-26534 | |
M | 4 | S4A | nonsyn | Tcc | Gcc | 108 | 106 | 0.981481 | 26532-26534 | |
M | 4 | S4A | nonsyn | TcC | GcA | 108 | 1 | 0.00925926 | 26532-26534 | |
M | 4 | S4A | nonsyn | TcC | GcG | 108 | 1 | 0.00925926 | 26532-26534 | |
M | 4 | S4P | nonsyn | Tcc | Ccc | 99 | 99 | 1 | 26532-26534 | |
M | 4 | S4del | del | TCC | --- | 68 | 68 | 1 | 26532-26534 | |
M | 4 | S4Y | nonsyn | tCc | tAc | 53 | 52 | 0.981132 | 26532-26534 | |
M | 4 | S4Y | nonsyn | tCC | tAT | 53 | 1 | 0.0188679 | 26532-26534 | |
M | 4 | S4T | nonsyn | Tcc | Acc | 6 | 6 | 1 | 26532-26534 | |
M | 4 | S4C | nonsyn | tCc | tGc | 5 | 5 | 1 | 26532-26534 | |
M | 4 | S4del1 | del | tCc | t-c | 5 | 5 | 1 | 26532-26534 | |
M | 4 | S4I | nonsyn | TCc | ATc | 2 | 2 | 1 | 26532-26534 | |
M | 4 | S4X | nonsyn | tCC | tAA | 1 | 1 | 1 | 26532-26534 | |
M | 4 | S4L | nonsyn | tCC | tTG | 1 | 1 | 1 | 26532-26534 | |
M | 4 | S4V | nonsyn | TCC | GTG | 1 | 1 | 1 | 26532-26534 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
M | 4 | S4F | tCc | tTc | 1904 | 1911 | All | 0.000364 |
M | 4 | S4F | tCC | tTT | 7 | 1911 | All | 0.000001 |
M | 4 | S4S | tcC | tcT | 1422 | 1522 | All | 0.000272 |
M | 4 | S4S | tcC | tcA | 76 | 1522 | All | 0.000015 |
M | 4 | S4S | tcC | tcG | 24 | 1522 | All | 0.000005 |
M | 4 | S4S | tcC | tcT | 278 | 282 | AY.20 | 0.010805 |
M | 4 | S4S | tcC | tcG | 4 | 282 | AY.20 | 0.000155 |
M | 4 | S4S | tcC | tcT | 214 | 217 | B.1.1.7 | 0.000192 |
M | 4 | S4S | tcC | tcA | 3 | 217 | B.1.1.7 | 0.000003 |
M | 4 | S4F | tCc | tTc | 213 | 213 | B.1.1.7 | 0.000191 |
M | 4 | S4F | tCc | tTc | 182 | 182 | AY.4 | 0.000283 |
M | 4 | S4F | tCc | tTc | 177 | 177 | AY.34 | 0.017163 |
M | 4 | S4S | tcC | tcT | 149 | 149 | B.1.243 | 0.010368 |
M | 4 | S4F | tCc | tTc | 123 | 123 | B.1.632 | 0.825503 |
M | 4 | S4A | Tcc | Gcc | 106 | 108 | All | 0.00002 |
M | 4 | S4A | TcC | GcA | 1 | 108 | All | 0 |
M | 4 | S4A | TcC | GcG | 1 | 108 | All | 0 |
M | 4 | S4P | Tcc | Ccc | 99 | 99 | All | 0.000019 |
M | 4 | S4S | tcC | tcT | 79 | 79 | B.1.1 | 0.001433 |
M | 4 | S4F | tCc | tTc | 78 | 78 | B.1.617.2 | 0.000294 |
M | 4 | S4F | tCc | tTc | 72 | 72 | B.1.177 | 0.000948 |
M | 4 | S4del | TCC | --- | 68 | 68 | All | 0.000013 |
M | 4 | S4S | tcC | tcA | 36 | 67 | B.1.617.2 | 0.000136 |
M | 4 | S4S | tcC | tcT | 31 | 67 | B.1.617.2 | 0.000117 |
M | 4 | S4S | tcC | tcT | 50 | 64 | AY.4 | 0.000078 |
M | 4 | S4S | tcC | tcG | 11 | 64 | AY.4 | 0.000017 |
M | 4 | S4S | tcC | tcA | 3 | 64 | AY.4 | 0.000005 |
M | 4 | S4S | tcC | tcT | 63 | 63 | AY.44 | 0.000383 |
M | 4 | S4S | tcC | tcT | 63 | 63 | B.1.1.404 | 1 |
M | 4 | S4A | Tcc | Gcc | 59 | 59 | AY.3.1 | 0.00503 |
M | 4 | S4Y | tCc | tAc | 52 | 53 | All | 0.00001 |
M | 4 | S4Y | tCC | tAT | 1 | 53 | All | 0 |
M | 4 | S4S | tcC | tcT | 51 | 52 | B.1.526 | 0.001199 |
M | 4 | S4S | tcC | tcA | 1 | 52 | B.1.526 | 0.000024 |
M | 4 | S4F | tCc | tTc | 50 | 50 | AY.103 | 0.00031 |
M | 4 | S4F | tCc | tTc | 45 | 46 | B.1 | 0.000412 |
M | 4 | S4F | tCC | tTT | 1 | 46 | B.1 | 0.000009 |
M | 4 | S4F | tCc | tTc | 45 | 45 | AY.25 | 0.000271 |
M | 4 | S4S | tcC | tcT | 44 | 44 | B.1 | 0.000403 |
M | 4 | S4F | tCc | tTc | 43 | 43 | B.1.160 | 0.001341 |
M | 4 | S4F | tCc | tTc | 39 | 39 | B.1.580 | 0.158537 |
M | 4 | S4P | Tcc | Ccc | 38 | 38 | B.1.1.7 | 0.000034 |
M | 4 | S4S | tcC | tcT | 36 | 36 | B.1.471 | 0.098361 |
M | 4 | S4F | tCc | tTc | 32 | 32 | AY.26 | 0.000906 |
M | 4 | S4F | tCc | tTc | 29 | 29 | B.1.1.519 | 0.001152 |
M | 4 | S4S | tcC | tcT | 29 | 29 | B.1.177 | 0.000382 |
M | 4 | S4S | tcC | tcT | 28 | 28 | L.3 | 0.099291 |
M | 4 | S4F | tCc | tTc | 27 | 27 | AY.39.1 | 0.00107 |
M | 4 | S4F | tCc | tTc | 27 | 27 | AY.4.2 | 0.000586 |
M | 4 | S4S | tcC | tcT | 27 | 27 | B.1.2 | 0.000238 |
M | 4 | S4F | tCc | tTc | 25 | 25 | P.1 | 0.000394 |
M | 4 | S4F | tCc | tTc | 24 | 24 | AY.43 | 0.000106 |
M | 4 | S4F | tCc | tTc | 24 | 24 | B.1.1 | 0.000435 |
M | 4 | S4F | tCc | tTc | 24 | 24 | B.1.2 | 0.000211 |
M | 4 | S4S | tcC | tcT | 23 | 23 | AY.3 | 0.000229 |
M | 4 | S4F | tCc | tTc | 23 | 23 | AY.44 | 0.00014 |
M | 4 | S4F | tCc | tTc | 23 | 23 | B.1.258 | 0.001531 |
M | 4 | S4A | Tcc | Gcc | 22 | 22 | B.1.177 | 0.00029 |
M | 4 | S4F | tCc | tTc | 21 | 21 | AY.119 | 0.000741 |
M | 4 | S4F | tCc | tTc | 21 | 21 | AY.23 | 0.001465 |
M | 4 | S4F | tCc | tTc | 19 | 19 | B.1.561 | 0.007543 |
M | 4 | S4F | tCc | tTc | 18 | 18 | B.1.573 | 0.109756 |
M | 4 | S4S | tcC | tcT | 16 | 17 | AY.103 | 0.000099 |
M | 4 | S4S | tcC | tcG | 1 | 17 | AY.103 | 0.000006 |
M | 4 | S4Y | tCc | tAc | 16 | 16 | B.1.1.317 | 0.006587 |
M | 4 | S4S | tcC | tcT | 14 | 16 | B.1.258 | 0.000932 |
M | 4 | S4S | tcC | tcA | 2 | 16 | B.1.258 | 0.000133 |
M | 4 | S4S | tcC | tcT | 9 | 15 | AY.43 | 0.00004 |
M | 4 | S4S | tcC | tcG | 4 | 15 | AY.43 | 0.000018 |
M | 4 | S4S | tcC | tcA | 2 | 15 | AY.43 | 0.000009 |
M | 4 | S4F | tCc | tTc | 15 | 15 | B.1.400 | 0.006435 |
M | 4 | S4F | tCc | tTc | 14 | 14 | B.1.1.214 | 0.000776 |
M | 4 | S4F | tCc | tTc | 14 | 14 | B.1.243 | 0.000974 |
M | 4 | S4F | tCc | tTc | 9 | 13 | AY.20 | 0.00035 |
M | 4 | S4F | tCC | tTT | 4 | 13 | AY.20 | 0.000155 |
M | 4 | S4F | tCc | tTc | 13 | 13 | AY.3 | 0.000129 |
M | 4 | S4F | tCc | tTc | 13 | 13 | B.1.351 | 0.000386 |
M | 4 | S4S | tcC | tcA | 9 | 12 | AY.100 | 0.000414 |
M | 4 | S4S | tcC | tcT | 3 | 12 | AY.100 | 0.000138 |
M | 4 | S4F | tCc | tTc | 12 | 12 | AY.102 | 0.000318 |
M | 4 | S4F | tCc | tTc | 12 | 12 | AY.29 | 0.000189 |
M | 4 | S4S | tcC | tcT | 11 | 12 | AY.39.1 | 0.000436 |
M | 4 | S4S | tcC | tcG | 1 | 12 | AY.39.1 | 0.00004 |
M | 4 | S4P | Tcc | Ccc | 12 | 12 | AY.4 | 0.000019 |
M | 4 | S4F | tCc | tTc | 12 | 12 | B | 0.001534 |
M | 4 | S4S | tcC | tcT | 12 | 12 | B.1.351 | 0.000357 |
M | 4 | S4del | TCC | --- | 11 | 11 | B.1.1.7 | 0.00001 |
M | 4 | S4S | tcC | tcT | 9 | 10 | AY.26 | 0.000255 |
M | 4 | S4S | tcC | tcA | 1 | 10 | AY.26 | 0.000028 |
M | 4 | S4F | tCc | tTc | 10 | 10 | AY.42 | 0.000402 |
M | 4 | S4F | tCc | tTc | 9 | 9 | AY.39 | 0.000222 |
M | 4 | S4del | TCC | --- | 9 | 9 | AY.4 | 0.000014 |
M | 4 | S4F | tCc | tTc | 9 | 9 | AY.98.1 | 0.000436 |
M | 4 | S4Y | tCc | tAc | 9 | 9 | B.1.1.7 | 0.000008 |
M | 4 | S4F | tCc | tTc | 9 | 9 | B.1.429 | 0.000212 |
M | 4 | S4F | tCc | tTc | 8 | 8 | A.2.5 | 0.003992 |
M | 4 | S4S | tcC | tcT | 8 | 8 | B.1.177.86 | 0.001468 |
M | 4 | S4F | tCc | tTc | 8 | 8 | B.1.526 | 0.000188 |
M | 4 | S4F | tCc | tTc | 7 | 7 | AY.107 | 0.003262 |
M | 4 | S4S | tcC | tcT | 7 | 7 | AY.25 | 0.000042 |
M | 4 | S4F | tCc | tTc | 7 | 7 | AY.3.1 | 0.000597 |
M | 4 | S4del | TCC | --- | 7 | 7 | AY.46.6 | 0.000505 |
M | 4 | S4Y | tCc | tAc | 7 | 7 | B.1 | 0.000064 |
M | 4 | S4S | tcC | tcT | 7 | 7 | B.1.1.519 | 0.000278 |
M | 4 | S4F | tCc | tTc | 7 | 7 | B.1.351.2 | 0.002118 |
M | 4 | S4F | tCc | tTc | 7 | 7 | B.1.525 | 0.000792 |
M | 4 | S4S | tcC | tcT | 6 | 7 | B.1.596 | 0.000523 |
M | 4 | S4S | tcC | tcA | 1 | 7 | B.1.596 | 0.000087 |
M | 4 | S4F | tCc | tTc | 7 | 7 | B.1.621 | 0.00062 |
M | 4 | S4T | Tcc | Acc | 6 | 6 | All | 0.000001 |
M | 4 | S4S | tcC | tcA | 6 | 6 | AY.32 | 0.003195 |
M | 4 | S4S | tcC | tcT | 5 | 6 | AY.54 | 0.000477 |
M | 4 | S4S | tcC | tcA | 1 | 6 | AY.54 | 0.000095 |
M | 4 | S4S | tcC | tcT | 6 | 6 | AY.92 | 0.001724 |
M | 4 | S4S | tcC | tcT | 6 | 6 | B | 0.000767 |
M | 4 | S4del | TCC | --- | 6 | 6 | B.1 | 0.000055 |
M | 4 | S4S | tcC | tcT | 6 | 6 | B.1.160 | 0.000187 |
M | 4 | S4P | Tcc | Ccc | 6 | 6 | B.1.177 | 0.000079 |
M | 4 | S4S | tcC | tcT | 6 | 6 | P.1.15 | 0.001394 |
M | 4 | S4P | Tcc | Ccc | 6 | 6 | P.1.17 | 0.000971 |
M | 4 | S4F | tCc | tTc | 6 | 6 | P.1.7 | 0.001916 |
M | 4 | S4del1 | tCc | t-c | 5 | 5 | All | 0.000001 |
M | 4 | S4C | tCc | tGc | 5 | 5 | All | 0.000001 |
M | 4 | S4F | tCc | tTc | 5 | 5 | AY.6 | 0.000206 |
M | 4 | S4F | tCc | tTc | 5 | 5 | B.1.108 | 0.02907 |
M | 4 | S4F | tCc | tTc | 5 | 5 | B.1.234 | 0.00066 |
M | 4 | S4F | tCc | tTc | 5 | 5 | B.1.367 | 0.003962 |
M | 4 | S4F | tCc | tTc | 5 | 5 | B.1.565 | 0.004052 |
M | 4 | S4F | tCc | tTc | 5 | 5 | B.1.596 | 0.000436 |
M | 4 | S4S | tcC | tcT | 5 | 5 | C.37 | 0.00058 |
M | 4 | S4F | tCc | tTc | 5 | 5 | P.1.1 | 0.001588 |
M | 4 | S4F | tCc | tTc | 5 | 5 | P.1.14 | 0.000239 |
M | 4 | S4A | Tcc | Gcc | 5 | 5 | P.1.15 | 0.001162 |
M | 4 | S4F | tCc | tTc | 4 | 4 | AY.100 | 0.000184 |
M | 4 | S4S | tcC | tcT | 4 | 4 | AY.102 | 0.000106 |
M | 4 | S4S | tcC | tcT | 4 | 4 | AY.110 | 0.000451 |
M | 4 | S4S | tcC | tcT | 4 | 4 | AY.119 | 0.000141 |
M | 4 | S4F | tCc | tTc | 4 | 4 | AY.120 | 0.000149 |
M | 4 | S4F | tCc | tTc | 4 | 4 | AY.27 | 0.000259 |
M | 4 | S4F | tCc | tTc | 4 | 4 | AY.33 | 0.000267 |
M | 4 | S4S | tcC | tcA | 3 | 4 | AY.46.6 | 0.000217 |
M | 4 | S4S | tcC | tcT | 1 | 4 | AY.46.6 | 0.000072 |
M | 4 | S4F | tCc | tTc | 4 | 4 | AY.57 | 0.002625 |
M | 4 | S4S | tcC | tcT | 4 | 4 | AY.61 | 0.000419 |
M | 4 | S4F | tCc | tTc | 4 | 4 | AY.98 | 0.000316 |
M | 4 | S4A | Tcc | Gcc | 4 | 4 | B.1.1 | 0.000073 |
M | 4 | S4F | tCc | tTc | 4 | 4 | B.1.1.284 | 0.00043 |
M | 4 | S4S | tcC | tcT | 4 | 4 | B.1.1.464 | 0.005891 |
M | 4 | S4F | tCc | tTc | 4 | 4 | B.1.177.4 | 0.000844 |
M | 4 | S4del1 | tCc | t-c | 4 | 4 | B.1.2 | 0.000035 |
M | 4 | S4F | tCc | tTc | 4 | 4 | B.1.221 | 0.000284 |
M | 4 | S4F | tCc | tTc | 4 | 4 | B.1.258.17 | 0.000416 |
M | 4 | S4F | tCc | tTc | 4 | 4 | D.2 | 0.0003 |
M | 4 | S4F | tCc | tTc | 4 | 4 | N.3 | 0.023256 |
M | 4 | S4S | tcC | tcT | 3 | 4 | P.1 | 0.000047 |
M | 4 | S4S | tcC | tcG | 1 | 4 | P.1 | 0.000016 |
M | 4 | S4F | tCc | tTc | 4 | 4 | W.4 | 0.005405 |
M | 4 | S4F | tCc | tTc | 2 | 3 | 0.111111 | |
M | 4 | S4F | tCC | tTT | 1 | 3 | 0.055556 | |
M | 4 | S4F | tCc | tTc | 3 | 3 | AA.6 | 0.048387 |
M | 4 | S4F | tCc | tTc | 3 | 3 | AY.117 | 0.000254 |
M | 4 | S4F | tCc | tTc | 3 | 3 | AY.118 | 0.000188 |
M | 4 | S4F | tCc | tTc | 3 | 3 | AY.121 | 0.000406 |
M | 4 | S4F | tCc | tTc | 3 | 3 | AY.13 | 0.000483 |
M | 4 | S4F | tCc | tTc | 3 | 3 | AY.2 | 0.001068 |
M | 4 | S4del | TCC | --- | 3 | 3 | AY.25 | 0.000018 |
M | 4 | S4S | tcC | tcT | 3 | 3 | AY.29 | 0.000047 |
M | 4 | S4S | tcC | tcT | 3 | 3 | AY.42 | 0.000121 |
M | 4 | S4A | Tcc | Gcc | 3 | 3 | AY.43 | 0.000013 |
M | 4 | S4Y | tCc | tAc | 3 | 3 | AY.43 | 0.000013 |
M | 4 | S4F | tCc | tTc | 3 | 3 | AY.46 | 0.000312 |
M | 4 | S4F | tCc | tTc | 3 | 3 | AY.46.5 | 0.000595 |
M | 4 | S4F | tCc | tTc | 3 | 3 | AY.5 | 0.000062 |
M | 4 | S4S | tcC | tcT | 3 | 3 | AY.6 | 0.000123 |
M | 4 | S4A | Tcc | Gcc | 3 | 3 | AY.61 | 0.000314 |
M | 4 | S4F | tCc | tTc | 3 | 3 | AY.9 | 0.000203 |
M | 4 | S4F | tCc | tTc | 3 | 3 | AY.93 | 0.000819 |
M | 4 | S4F | tCc | tTc | 3 | 3 | B.1.1.121 | 0.007282 |
M | 4 | S4S | tcC | tcT | 3 | 3 | B.1.1.169 | 0.054545 |
M | 4 | S4F | tCc | tTc | 3 | 3 | B.1.1.311 | 0.001074 |
M | 4 | S4F | tCc | tTc | 3 | 3 | B.1.1.411 | 0.044118 |
M | 4 | S4F | tCc | tTc | 2 | 3 | B.1.1.63 | 0.000772 |
M | 4 | S4F | tCC | tTT | 1 | 3 | B.1.1.63 | 0.000386 |
M | 4 | S4A | Tcc | Gcc | 3 | 3 | B.1.1.7 | 0.000003 |
M | 4 | S4S | tcC | tcT | 3 | 3 | B.1.177.20 | 0.004552 |
M | 4 | S4F | tCc | tTc | 3 | 3 | B.1.177.60 | 0.000655 |
M | 4 | S4F | tCc | tTc | 3 | 3 | B.1.177.81 | 0.000568 |
M | 4 | S4S | tcC | tcT | 3 | 3 | B.1.258.11 | 0.001189 |
M | 4 | S4F | tCc | tTc | 3 | 3 | B.1.36.18 | 0.001261 |
M | 4 | S4F | tCc | tTc | 3 | 3 | B.1.517 | 0.001281 |
M | 4 | S4S | tcC | tcA | 3 | 3 | B.1.525 | 0.000339 |
M | 4 | S4F | tCc | tTc | 3 | 3 | B.1.609 | 0.001438 |
M | 4 | S4F | tCc | tTc | 3 | 3 | B.4.8 | 0.214286 |
M | 4 | S4P | Tcc | Ccc | 3 | 3 | R.1 | 0.00027 |
M | 4 | S4del | TCC | --- | 2 | 2 | 0.111111 | |
M | 4 | S4S | tcC | tcT | 1 | 2 | 0.055556 | |
M | 4 | S4S | tcC | tcG | 1 | 2 | 0.055556 | |
M | 4 | S4I | TCc | ATc | 2 | 2 | All | 0 |
M | 4 | S4F | tCc | tTc | 2 | 2 | AM.4 | 0.007143 |
M | 4 | S4del | TCC | --- | 2 | 2 | AY.100 | 0.000092 |
M | 4 | S4P | Tcc | Ccc | 2 | 2 | AY.120 | 0.000074 |
M | 4 | S4S | tcC | tcT | 1 | 2 | AY.120 | 0.000037 |
M | 4 | S4S | tcC | tcG | 1 | 2 | AY.120 | 0.000037 |
M | 4 | S4S | tcC | tcT | 2 | 2 | AY.121 | 0.000271 |
M | 4 | S4F | tCc | tTc | 2 | 2 | AY.34.1 | 0.00102 |
M | 4 | S4F | tCc | tTc | 2 | 2 | AY.35 | 0.000466 |
M | 4 | S4S | tcC | tcT | 2 | 2 | AY.39 | 0.000049 |
M | 4 | S4S | tcC | tcT | 2 | 2 | AY.4.2 | 0.000043 |
M | 4 | S4del | TCC | --- | 2 | 2 | AY.4.5 | 0.000215 |
M | 4 | S4P | Tcc | Ccc | 2 | 2 | AY.43 | 0.000009 |
M | 4 | S4del | TCC | --- | 2 | 2 | AY.43 | 0.000009 |
M | 4 | S4del | TCC | --- | 2 | 2 | AY.44 | 0.000012 |
M | 4 | S4F | tCc | tTc | 2 | 2 | AY.47 | 0.000062 |
M | 4 | S4F | tCc | tTc | 2 | 2 | AY.48 | 0.00093 |
M | 4 | S4F | tCc | tTc | 2 | 2 | AY.55 | 0.001835 |
M | 4 | S4F | tCc | tTc | 2 | 2 | AY.75 | 0.000112 |
M | 4 | S4P | Tcc | Ccc | 2 | 2 | AY.9.1 | 0.000167 |
M | 4 | S4S | tcC | tcT | 2 | 2 | AY.9.2 | 0.000073 |
M | 4 | S4P | Tcc | Ccc | 2 | 2 | B.1 | 0.000018 |
M | 4 | S4F | tCc | tTc | 2 | 2 | B.1.1.1 | 0.000653 |
M | 4 | S4S | tcC | tcT | 2 | 2 | B.1.1.214 | 0.000111 |
M | 4 | S4S | tcC | tcT | 2 | 2 | B.1.1.28 | 0.000622 |
M | 4 | S4S | tcC | tcT | 2 | 2 | B.1.1.294 | 0.002532 |
M | 4 | S4S | tcC | tcT | 2 | 2 | B.1.1.33 | 0.000842 |
M | 4 | S4F | tCc | tTc | 2 | 2 | B.1.1.33 | 0.000842 |
M | 4 | S4S | tcC | tcA | 2 | 2 | B.1.1.47 | 0.010695 |
M | 4 | S4C | tCc | tGc | 2 | 2 | B.1.1.7 | 0.000002 |
M | 4 | S4F | tCc | tTc | 2 | 2 | B.1.128 | 0.001271 |
M | 4 | S4Y | tCc | tAc | 2 | 2 | B.1.160 | 0.000062 |
M | 4 | S4F | tCc | tTc | 2 | 2 | B.1.160.16 | 0.001859 |
M | 4 | S4F | tCc | tTc | 2 | 2 | B.1.160.26 | 0.004843 |
M | 4 | S4S | tcC | tcT | 2 | 2 | B.1.177.53 | 0.004785 |
M | 4 | S4S | tcC | tcT | 2 | 2 | B.1.177.8 | 0.001505 |
M | 4 | S4Y | tCc | tAc | 2 | 2 | B.1.2 | 0.000018 |
M | 4 | S4S | tcC | tcT | 2 | 2 | B.1.206 | 0.001631 |
M | 4 | S4S | tcC | tcT | 2 | 2 | B.1.210 | 0.004264 |
M | 4 | S4S | tcC | tcT | 2 | 2 | B.1.234 | 0.000264 |
M | 4 | S4F | tCc | tTc | 2 | 2 | B.1.240 | 0.000431 |
M | 4 | S4F | tCc | tTc | 2 | 2 | B.1.241 | 0.001623 |
M | 4 | S4P | Tcc | Ccc | 2 | 2 | B.1.243 | 0.000139 |
M | 4 | S4P | Tcc | Ccc | 2 | 2 | B.1.36 | 0.000292 |
M | 4 | S4F | tCc | tTc | 2 | 2 | B.1.396 | 0.001411 |
M | 4 | S4P | Tcc | Ccc | 2 | 2 | B.1.429 | 0.000047 |
M | 4 | S4F | tCc | tTc | 2 | 2 | B.1.438.1 | 0.000215 |
M | 4 | S4S | tcC | tcT | 2 | 2 | B.1.466.2 | 0.000782 |
M | 4 | S4F | tCc | tTc | 2 | 2 | B.1.474 | 0.003802 |
M | 4 | S4S | tcC | tcT | 2 | 2 | B.1.517 | 0.000854 |
M | 4 | S4Y | tCC | tAT | 1 | 2 | B.1.617.1 | 0.000129 |
M | 4 | S4S | tcC | tcA | 1 | 2 | B.1.617.1 | 0.000129 |
M | 4 | S4Y | tCc | tAc | 1 | 2 | B.1.617.1 | 0.000129 |
M | 4 | S4S | tcC | tcT | 1 | 2 | B.1.617.1 | 0.000129 |
M | 4 | S4P | Tcc | Ccc | 2 | 2 | B.1.617.2 | 0.000008 |
M | 4 | S4F | tCc | tTc | 2 | 2 | B.1.623 | 0.001073 |
M | 4 | S4F | tCc | tTc | 2 | 2 | B.40 | 0.000729 |
M | 4 | S4F | tCc | tTc | 2 | 2 | C.14 | 0.008658 |
M | 4 | S4del | TCC | --- | 2 | 2 | P.1 | 0.000032 |
M | 4 | S4P | Tcc | Ccc | 2 | 2 | P.1 | 0.000032 |
M | 4 | S4S | tcC | tcT | 2 | 2 | P.1.14 | 0.000096 |
M | 4 | S4F | tCc | tTc | 2 | 2 | Q.1 | 0.000253 |
M | 4 | S4L | tCC | tTG | 1 | 1 | 0.055556 | |
M | 4 | S4F | tCc | tTc | 1 | 1 | A | 0.000387 |
M | 4 | S4Y | tCc | tAc | 1 | 1 | A | 0.000387 |
M | 4 | S4F | tCc | tTc | 1 | 1 | A.2.2 | 0.001689 |
M | 4 | S4F | tCc | tTc | 1 | 1 | A.23.1 | 0.000704 |
M | 4 | S4F | tCc | tTc | 1 | 1 | A.29 | 0.005319 |
M | 4 | S4L | tCC | tTG | 1 | 1 | All | 0 |
M | 4 | S4X | tCC | tAA | 1 | 1 | All | 0 |
M | 4 | S4V | TCC | GTG | 1 | 1 | All | 0 |
M | 4 | S4S | tcC | tcT | 1 | 1 | AU.1 | 0.001266 |
M | 4 | S4F | tCc | tTc | 1 | 1 | AU.1 | 0.001266 |
M | 4 | S4F | tCc | tTc | 1 | 1 | AU.3 | 0.00211 |
M | 4 | S4F | tCc | tTc | 1 | 1 | AY.101 | 0.00049 |
M | 4 | S4Y | tCc | tAc | 1 | 1 | AY.103 | 0.000006 |
M | 4 | S4F | tCc | tTc | 1 | 1 | AY.105 | 0.000643 |
M | 4 | S4Y | tCc | tAc | 1 | 1 | AY.107 | 0.000466 |
M | 4 | S4del | TCC | --- | 1 | 1 | AY.108 | 0.001103 |
M | 4 | S4F | tCc | tTc | 1 | 1 | AY.110 | 0.000113 |
M | 4 | S4F | tCc | tTc | 1 | 1 | AY.116 | 0.000287 |
M | 4 | S4S | tcC | tcA | 1 | 1 | AY.116 | 0.000287 |
M | 4 | S4del | TCC | --- | 1 | 1 | AY.118 | 0.000063 |
M | 4 | S4F | tCc | tTc | 1 | 1 | AY.12 | 0.000316 |
M | 4 | S4del | TCC | --- | 1 | 1 | AY.120 | 0.000037 |
M | 4 | S4F | tCc | tTc | 1 | 1 | AY.120.2.1 | 0.000498 |
M | 4 | S4F | tCc | tTc | 1 | 1 | AY.14 | 0.000088 |
M | 4 | S4S | tcC | tcT | 1 | 1 | AY.14 | 0.000088 |
M | 4 | S4S | tcC | tcT | 1 | 1 | AY.16 | 0.00038 |
M | 4 | S4F | tCc | tTc | 1 | 1 | AY.22 | 0.002092 |
M | 4 | S4F | tCc | tTc | 1 | 1 | AY.23.1 | 0.000417 |
M | 4 | S4S | tcC | tcT | 1 | 1 | AY.29.1 | 0.000221 |
M | 4 | S4F | tCc | tTc | 1 | 1 | AY.29.1 | 0.000221 |
M | 4 | S4S | tcC | tcT | 1 | 1 | AY.3.1 | 0.000085 |
M | 4 | S4F | tCc | tTc | 1 | 1 | AY.32 | 0.000532 |
M | 4 | S4S | tcC | tcT | 1 | 1 | AY.33 | 0.000067 |
M | 4 | S4C | tCc | tGc | 1 | 1 | AY.4 | 0.000002 |
M | 4 | S4A | Tcc | Gcc | 1 | 1 | AY.4 | 0.000002 |
M | 4 | S4S | tcC | tcT | 1 | 1 | AY.4.1 | 0.000737 |
M | 4 | S4Y | tCc | tAc | 1 | 1 | AY.4.2 | 0.000022 |
M | 4 | S4F | tCc | tTc | 1 | 1 | AY.4.3 | 0.000842 |
M | 4 | S4F | tCc | tTc | 1 | 1 | AY.4.5 | 0.000107 |
M | 4 | S4S | tcC | tcT | 1 | 1 | AY.4.5 | 0.000107 |
M | 4 | S4S | tcC | tcT | 1 | 1 | AY.40 | 0.000964 |
M | 4 | S4T | Tcc | Acc | 1 | 1 | AY.43 | 0.000004 |
M | 4 | S4S | tcC | tcT | 1 | 1 | AY.45 | 0.000122 |
M | 4 | S4A | Tcc | Gcc | 1 | 1 | AY.45 | 0.000122 |
M | 4 | S4Y | tCc | tAc | 1 | 1 | AY.45 | 0.000122 |
M | 4 | S4F | tCc | tTc | 1 | 1 | AY.46.6 | 0.000072 |
M | 4 | S4A | Tcc | Gcc | 1 | 1 | AY.47 | 0.000031 |
M | 4 | S4S | tcC | tcT | 1 | 1 | AY.47 | 0.000031 |
M | 4 | S4T | Tcc | Acc | 1 | 1 | AY.5 | 0.000021 |
M | 4 | S4F | tCc | tTc | 1 | 1 | AY.53 | 0.000288 |
M | 4 | S4P | Tcc | Ccc | 1 | 1 | AY.54 | 0.000095 |
M | 4 | S4F | tCc | tTc | 1 | 1 | AY.59 | 0.00053 |
M | 4 | S4F | tCc | tTc | 1 | 1 | AY.61 | 0.000105 |
M | 4 | S4Y | tCc | tAc | 1 | 1 | AY.61 | 0.000105 |
M | 4 | S4del | TCC | --- | 1 | 1 | AY.68 | 0.000274 |
M | 4 | S4S | tcC | tcT | 1 | 1 | AY.69 | 0.000187 |
M | 4 | S4P | Tcc | Ccc | 1 | 1 | AY.7 | 0.000196 |
M | 4 | S4F | tCc | tTc | 1 | 1 | AY.70 | 0.000209 |
M | 4 | S4F | tCc | tTc | 1 | 1 | AY.72 | 0.001361 |
M | 4 | S4F | tCc | tTc | 1 | 1 | AY.74 | 0.000116 |
M | 4 | S4S | tcC | tcT | 1 | 1 | AY.74 | 0.000116 |
M | 4 | S4S | tcC | tcT | 1 | 1 | AY.75 | 0.000056 |
M | 4 | S4F | tCc | tTc | 1 | 1 | AY.77 | 0.001127 |
M | 4 | S4F | tCc | tTc | 1 | 1 | AY.78 | 0.001541 |
M | 4 | S4S | tcC | tcT | 1 | 1 | AY.85 | 0.000427 |
M | 4 | S4del | TCC | --- | 1 | 1 | AY.9 | 0.000068 |
M | 4 | S4S | tcC | tcT | 1 | 1 | AY.9.1 | 0.000084 |
M | 4 | S4S | tcC | tcT | 1 | 1 | AY.93 | 0.000273 |
M | 4 | S4S | tcC | tcT | 1 | 1 | AY.98 | 0.000079 |
M | 4 | S4S | tcC | tcA | 1 | 1 | AY.98.1 | 0.000048 |
M | 4 | S4P | Tcc | Ccc | 1 | 1 | AY.98.1 | 0.000048 |
M | 4 | S4F | tCc | tTc | 1 | 1 | AY.99 | 0.001049 |
M | 4 | S4S | tcC | tcT | 1 | 1 | AY.99.2 | 0.000092 |
M | 4 | S4del | TCC | --- | 1 | 1 | B | 0.000128 |
M | 4 | S4T | Tcc | Acc | 1 | 1 | B.1 | 0.000009 |
M | 4 | S4A | TcC | GcA | 1 | 1 | B.1 | 0.000009 |
M | 4 | S4I | TCc | ATc | 1 | 1 | B.1 | 0.000009 |
M | 4 | S4Y | tCc | tAc | 1 | 1 | B.1.1 | 0.000018 |
M | 4 | S4T | Tcc | Acc | 1 | 1 | B.1.1 | 0.000018 |
M | 4 | S4I | TCc | ATc | 1 | 1 | B.1.1 | 0.000018 |
M | 4 | S4S | tcC | tcT | 1 | 1 | B.1.1.10 | 0.001115 |
M | 4 | S4C | tCc | tGc | 1 | 1 | B.1.1.101 | 0.01 |
M | 4 | S4S | tcC | tcT | 1 | 1 | B.1.1.117 | 0.009709 |
M | 4 | S4del | TCC | --- | 1 | 1 | B.1.1.139 | 0.022727 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.1.170 | 0.001247 |
M | 4 | S4S | tcC | tcT | 1 | 1 | B.1.1.174 | 0.003378 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.1.176 | 0.000439 |
M | 4 | S4del1 | tCc | t-c | 1 | 1 | B.1.1.222 | 0.000204 |
M | 4 | S4S | tcC | tcT | 1 | 1 | B.1.1.222 | 0.000204 |
M | 4 | S4Y | tCc | tAc | 1 | 1 | B.1.1.225 | 0.007194 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.1.25 | 0.000569 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.1.253 | 0.002506 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.1.28 | 0.000311 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.1.280 | 0.003086 |
M | 4 | S4del | TCC | --- | 1 | 1 | B.1.1.288 | 0.001916 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.1.294 | 0.001266 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.1.309 | 0.005848 |
M | 4 | S4A | Tcc | Gcc | 1 | 1 | B.1.1.312 | 0.001912 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.1.316 | 0.000925 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.1.318 | 0.000302 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.1.322 | 0.008772 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.1.369 | 0.000446 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.1.37 | 0.000193 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.1.391 | 0.008547 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.1.402 | 0.011111 |
M | 4 | S4S | tcC | tcT | 1 | 1 | B.1.1.406 | 0.006494 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.1.416 | 0.000905 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.1.420 | 0.001006 |
M | 4 | S4P | Tcc | Ccc | 1 | 1 | B.1.1.50 | 0.000679 |
M | 4 | S4del | TCC | --- | 1 | 1 | B.1.1.519 | 0.00004 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.1.526 | 0.003546 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.1.61 | 0.008772 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.1.70 | 0.000341 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.147 | 0.000756 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.157 | 0.002985 |
M | 4 | S4del | TCC | --- | 1 | 1 | B.1.160 | 0.000031 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.160.15 | 0.00495 |
M | 4 | S4S | tcC | tcT | 1 | 1 | B.1.160.31 | 0.008065 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.170 | 0.00431 |
M | 4 | S4del | TCC | --- | 1 | 1 | B.1.177 | 0.000013 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.177.10 | 0.000878 |
M | 4 | S4del | TCC | --- | 1 | 1 | B.1.177.16 | 0.000664 |
M | 4 | S4del | TCC | --- | 1 | 1 | B.1.177.17 | 0.000821 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.177.21 | 0.000076 |
M | 4 | S4P | Tcc | Ccc | 1 | 1 | B.1.177.21 | 0.000076 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.177.56 | 0.000668 |
M | 4 | S4S | tcC | tcT | 1 | 1 | B.1.177.65 | 0.000665 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.177.7 | 0.000165 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.177.73 | 0.000566 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.177.8 | 0.000752 |
M | 4 | S4S | tcC | tcT | 1 | 1 | B.1.177.81 | 0.000189 |
M | 4 | S4del | TCC | --- | 1 | 1 | B.1.177.87 | 0.000728 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.177.87 | 0.000728 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.179 | 0.003759 |
M | 4 | S4A | Tcc | Gcc | 1 | 1 | B.1.2 | 0.000009 |
M | 4 | S4P | Tcc | Ccc | 1 | 1 | B.1.2 | 0.000009 |
M | 4 | S4V | TCC | GTG | 1 | 1 | B.1.210 | 0.002132 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.210 | 0.002132 |
M | 4 | S4S | tcC | tcT | 1 | 1 | B.1.221 | 0.000071 |
M | 4 | S4S | tcC | tcT | 1 | 1 | B.1.223 | 0.002778 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.236 | 0.002053 |
M | 4 | S4P | Tcc | Ccc | 1 | 1 | B.1.258 | 0.000067 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.258.14 | 0.00098 |
M | 4 | S4S | tcC | tcT | 1 | 1 | B.1.258.17 | 0.000104 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.298 | 0.002114 |
M | 4 | S4S | tcC | tcT | 1 | 1 | B.1.3 | 0.002618 |
M | 4 | S4Y | tCc | tAc | 1 | 1 | B.1.301 | 0.005917 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.311 | 0.000275 |
M | 4 | S4del | TCC | --- | 1 | 1 | B.1.311 | 0.000275 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.325 | 0.006897 |
M | 4 | S4S | tcC | tcT | 1 | 1 | B.1.326 | 0.007576 |
M | 4 | S4P | Tcc | Ccc | 1 | 1 | B.1.351 | 0.00003 |
M | 4 | S4Y | tCc | tAc | 1 | 1 | B.1.351 | 0.00003 |
M | 4 | S4del | TCC | --- | 1 | 1 | B.1.351.2 | 0.000303 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.351.3 | 0.000876 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.36 | 0.000146 |
M | 4 | S4T | Tcc | Acc | 1 | 1 | B.1.36.23 | 0.016393 |
M | 4 | S4S | tcC | tcT | 1 | 1 | B.1.36.29 | 0.000517 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.36.29 | 0.000517 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.36.36 | 0.000602 |
M | 4 | S4P | Tcc | Ccc | 1 | 1 | B.1.36.9 | 0.003215 |
M | 4 | S4S | tcC | tcT | 1 | 1 | B.1.369 | 0.000285 |
M | 4 | S4P | Tcc | Ccc | 1 | 1 | B.1.404 | 0.001302 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.409 | 0.000781 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.411 | 0.003704 |
M | 4 | S4T | Tcc | Acc | 1 | 1 | B.1.413 | 0.004255 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.420 | 0.010417 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.427 | 0.00005 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.428 | 0.00102 |
M | 4 | S4S | tcC | tcT | 1 | 1 | B.1.429 | 0.000024 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.432 | 0.011236 |
M | 4 | S4Y | tCc | tAc | 1 | 1 | B.1.438.1 | 0.000107 |
M | 4 | S4P | Tcc | Ccc | 1 | 1 | B.1.473 | 0.019231 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.478 | 0.011765 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.480 | 0.002488 |
M | 4 | S4S | tcC | tcT | 1 | 1 | B.1.527 | 0.003704 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.536 | 0.02381 |
M | 4 | S4S | tcC | tcT | 1 | 1 | B.1.551 | 0.00129 |
M | 4 | S4del | TCC | --- | 1 | 1 | B.1.561 | 0.000397 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.575 | 0.000303 |
M | 4 | S4S | tcC | tcT | 1 | 1 | B.1.590 | 0.004545 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.595 | 0.000261 |
M | 4 | S4P | Tcc | Ccc | 1 | 1 | B.1.595 | 0.000261 |
M | 4 | S4Y | tCc | tAc | 1 | 1 | B.1.597 | 0.00463 |
M | 4 | S4S | tcC | tcT | 1 | 1 | B.1.609 | 0.000479 |
M | 4 | S4X | tCC | tAA | 1 | 1 | B.1.617.1 | 0.000129 |
M | 4 | S4del | TCC | --- | 1 | 1 | B.1.617.2 | 0.000004 |
M | 4 | S4S | tcC | tcT | 1 | 1 | B.1.619 | 0.000871 |
M | 4 | S4P | Tcc | Ccc | 1 | 1 | B.1.621 | 0.000089 |
M | 4 | S4C | tCc | tGc | 1 | 1 | B.1.621 | 0.000089 |
M | 4 | S4S | tcC | tcT | 1 | 1 | B.1.621.1 | 0.000506 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.630 | 0.005236 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.637 | 0.000073 |
M | 4 | S4S | tcC | tcT | 1 | 1 | B.1.637 | 0.000073 |
M | 4 | S4S | tcC | tcT | 1 | 1 | B.1.78 | 0.008547 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.1.9 | 0.006173 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.11 | 0.005128 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.28 | 0.003279 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.3 | 0.000831 |
M | 4 | S4del | TCC | --- | 1 | 1 | B.30 | 0.014706 |
M | 4 | S4F | tCc | tTc | 1 | 1 | B.4 | 0.002208 |
M | 4 | S4F | tCc | tTc | 1 | 1 | C.16 | 0.00106 |
M | 4 | S4F | tCc | tTc | 1 | 1 | C.31 | 0.017857 |
M | 4 | S4F | tCc | tTc | 1 | 1 | C.36 | 0.000911 |
M | 4 | S4P | Tcc | Ccc | 1 | 1 | D.2 | 0.000075 |
M | 4 | S4P | Tcc | Ccc | 1 | 1 | N.5 | 0.001767 |
M | 4 | S4A | Tcc | Gcc | 1 | 1 | P.1 | 0.000016 |
M | 4 | S4P | Tcc | Ccc | 1 | 1 | P.1.12 | 0.000484 |
M | 4 | S4del | TCC | --- | 1 | 1 | P.1.15 | 0.000232 |
M | 4 | S4F | tCc | tTc | 1 | 1 | P.1.6 | 0.001946 |
M | 4 | S4A | Tcc | Gcc | 1 | 1 | P.2 | 0.000187 |
M | 4 | S4A | TcC | GcG | 1 | 1 | Q.8 | 0.000165 |
M | 4 | S4S | tcC | tcT | 1 | 1 | Q.8 | 0.000165 |
M | 4 | S4F | tCc | tTc | 1 | 1 | R.1 | 0.00009 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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